Radionuclides

from opendrift.readers import reader_netCDF_CF_generic, reader_ROMS_native
from opendrift.models.radionuclides import RadionuclideDrift
from datetime import timedelta, datetime
import numpy as np


o = RadionuclideDrift(loglevel=0, seed=0)  # Set loglevel to 0 for debug information

# Norkyst
#reader_norkyst = reader_netCDF_CF_generic.Reader(o.test_data_folder() + '/14Jan2016_NorKyst_z_3d/NorKyst-800m_ZDEPTHS_his_00_3Dsubset.nc')
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')

o.add_reader([reader_norkyst])



# Adjusting some configuration
o.set_config('drift:vertical_mixing', True)
#o.set_config('environment:constant:ocean_vertical_diffusivity', 0)
#o.set_config('vertical_mixing:diffusivitymodel','constant')  # include settling without vertical turbulent mixing
o.set_config('vertical_mixing:diffusivitymodel','environment')  # include settling without vertical turbulent mixing
# Vertical mixing requires fast time step
o.set_config('vertical_mixing:timestep', 600.) # seconds
o.set_config('drift:horizontal_diffusivity', 10)

Out:

13:46:09 DEBUG   opendrift.models.basemodel: Adding 17 config items from basemodel
13:46:09 DEBUG   opendrift.models.basemodel: Adding 8 config items from basemodel
13:46:09 DEBUG   opendrift.models.basemodel: Adding 22 config items from basemodel
13:46:09 INFO    opendrift.models.basemodel: OpenDriftSimulation initialised (version 1.7.1 / v1.7.1-87-g074c1d2)
13:46:09 DEBUG   opendrift.models.basemodel: Adding 14 config items from oceandrift
13:46:09 DEBUG   opendrift.models.basemodel:   Overwriting config item seed:z
13:46:09 DEBUG   opendrift.models.basemodel: Adding 35 config items from radionuclides
13:46:09 INFO    opendrift.readers.reader_netCDF_CF_generic: Opening dataset: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:11 DEBUG   opendrift.readers.reader_netCDF_CF_generic: Finding coordinate variables.
13:46:12 DEBUG   opendrift.readers.reader_netCDF_CF_generic: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
13:46:12 DEBUG   opendrift.readers.basereader.variables: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s.
13:46:12 DEBUG   opendrift.readers.basereader: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
13:46:12 DEBUG   opendrift.readers.basereader.variables: Setting buffer size 7 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 1 m/s.
13:46:12 DEBUG   opendrift.models.basemodel: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be

Activate the desired species o.set_config(‘radionuclide:species:LMM’, True) o.set_config(‘radionuclide:species:LMMcation’, True) o.set_config(‘radionuclide:species:LMManion’, True) o.set_config(‘radionuclide:species:Colloid’, True) o.set_config(‘radionuclide:species:Humic_colloid’, True) o.set_config(‘radionuclide:species:Polymer’, True) o.set_config(‘radionuclide:species:Particle_reversible’, True) o.set_config(‘radionuclide:species:Particle_irreversible’, True) o.set_config(‘radionuclide:species:Particle_slowly_reversible’, True)

#o.set_config('radionuclide:species:Sediment_reversible', True)
#o.set_config('radionuclide:species:Sediment_irreversible', True)
#o.set_config('radionuclide:species:Sediment_slowly_reversible', True)

o.set_config('radionuclide:particle_diameter',5.e-6)  # m
#o.set_config('radionuclide:particle_diameter_uncertainty',1.e-7) # m
o.set_config('radionuclide:transformations:Kd',2.e0) # (m3/kg)
#o.set_config('radionuclide:transformations:slow_coeff',1.e-6)

o.set_config('radionuclide:sediment:resuspension_depth',2.)
o.set_config('radionuclide:sediment:resuspension_depth_uncert',0.1)
o.set_config('radionuclide:sediment:resuspension_critvel',0.15)


#
#o.set_config('radionuclide:transfer_setup','custom')
o.set_config('radionuclide:transfer_setup','Bokna_137Cs')
#o.set_config('radionuclide:transfer_setup','137Cs_rev')
#o.set_config('radionuclide:transfer_setup','Sandnesfj_Al')

# By default, radionuclides do not strand towards coastline
o.set_config('general:coastline_action', 'previous')
o.set_config('general:seafloor_action','lift_to_seafloor')
#o.set_config('general:seafloor_action','previous')
#o.set_config('general:use_auto_landmask',False)


o.set_config('seed:LMM_fraction',.45)
o.set_config('seed:particle_fraction',.55)

o.list_configspec()



# SEEDING

td=datetime.today()
time = datetime(td.year, td.month, td.day, 0)

#latseed= 61.2; lonseed= 4.3    # Sognesjen
#latseed= 59.0;   lonseed= 10.75 # Hvaler/Koster
#latseed= 57.5;   lonseed= 9.3 # Kattegat
latseed= 60.0;   lonseed= 4.5 # Bergen (?)

ntraj=5000
iniz=np.random.rand(ntraj) * -10. # seeding the radionuclides in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=1000,number=ntraj,
                time=time,
#                LMM_fraction=0.25,
#                particle_fraction=0.75
#                diameter=99.e-6#diam,
                #specie=init_speciation
                )

Out:

general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:horizontal_diffusivity        [10.0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:neutral_buoyancy_salinity      [31.25] float min: None, max: None [[]] Seeding value of neu...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: 0, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [None] float min: 0, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:conc3          [None] float min: None, max: None [None] Use constant value f...
environment:fallback:conc3          [0.001] float min: None, max: None [None] Fallback value for c...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [600.0] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [environment] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [0.001] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
radionuclide:transfer_setup         [Bokna_137Cs] enum  ['Sandnesfj_Al', 'Bokna_137Cs', '137Cs_rev', 'custom'] ...
radionuclide:slowly_fraction        [False] bool   ...
radionuclide:irreversible_fraction  [False] bool   ...
radionuclide:dissolved_diameter     [0] float min: 0, max: 0.0001 [m] ...
radionuclide:particle_diameter      [5e-06] float min: 0, max: 0.0001 [m] ...
radionuclide:particle_diameter_uncertainty [1e-07] float min: 0, max: 0.0001 [m] ...
radionuclide:activity_per_element   [1] float min: 0, max: 1e+18 [] ...
seed:LMM_fraction                   [0.45] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.55] float min: 0, max: 1 [] ...
radionuclide:species:LMM            [True] bool   Toggle LMM species...
radionuclide:species:LMMcation      [False] bool   ...
radionuclide:species:LMManion       [False] bool   ...
radionuclide:species:Colloid        [False] bool   ...
radionuclide:species:Humic_colloid  [False] bool   ...
radionuclide:species:Polymer        [False] bool   ...
radionuclide:species:Particle_reversible [True] bool   ...
radionuclide:species:Particle_slowly_reversible [False] bool   ...
radionuclide:species:Particle_irreversible [False] bool   ...
radionuclide:species:Sediment_reversible [True] bool   ...
radionuclide:species:Sediment_slowly_reversible [False] bool   ...
radionuclide:species:Sediment_irreversible [False] bool   ...
radionuclide:transformations:Kd     [2.0] float min: 0, max: 1000000000.0 [] ...
radionuclide:transformations:Dc     [1.16e-05] float min: 0, max: 1000000.0 [] ...
radionuclide:transformations:slow_coeff [1.2e-07] float min: 0, max: 1000000.0 [] ...
radionuclide:sediment:sedmixdepth   [1] float min: 0, max: 100 [m] ...
radionuclide:sediment:sediment_density [2600] float min: 0, max: 10000 [kg/m3] ...
radionuclide:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
radionuclide:sediment:corr_factor   [0.1] float min: 0, max: 10 [] ...
radionuclide:sediment:porosity      [0.6] float min: 0, max: 1 [] ...
radionuclide:sediment:layer_thick   [1] float min: 0, max: 100 [m] ...
radionuclide:sediment:desorption_depth [1] float min: 0, max: 100 [m] ...
radionuclide:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
radionuclide:sediment:resuspension_depth [2.0] float min: 0, max: 100 [m] ...
radionuclide:sediment:resuspension_depth_uncert [0.1] float min: 0, max: 100 [m] ...
radionuclide:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
13:46:12 INFO    opendrift.models.radionuclides: Initial speciation:
13:46:12 INFO    opendrift.models.radionuclides:      2250   0 LMM
13:46:12 INFO    opendrift.models.radionuclides:      2750   1 Particle reversible
13:46:12 INFO    opendrift.models.radionuclides:         0   2 Particle slowly reversible
13:46:12 INFO    opendrift.models.radionuclides:         0   3 Sediment reversible
13:46:12 INFO    opendrift.models.radionuclides:         0   4 Sediment slowly reversible

Running model

o.run(steps=24*2, time_step=1800, time_step_output=3600)

Out:

13:46:12 DEBUG   opendrift.models.basemodel:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.7.1
  Platform: Linux, 4.15.0-1106-aws
  68.69182968139648 GB memory
  36 processors ()
  NumPy version 1.21.2
  SciPy version 1.7.1
  Matplotlib version 3.4.3
  NetCDF4 version 1.5.6
  Xarray version 0.19.0
  OilLibrary version 1.1.3
  Python version 3.9.7 | packaged by conda-forge | (default, Sep 14 2021, 01:17:55) [GCC 9.4.0]
------------------------------------------------------

13:46:12 DEBUG   opendrift.models.basemodel: No output file is specified, neglecting export_buffer_length
13:46:12 INFO    opendrift.models.basemodel: Fallback values will be used for the following variables which have no readers:
13:46:12 INFO    opendrift.models.basemodel:    ocean_vertical_diffusivity: 0.000100
13:46:12 INFO    opendrift.models.basemodel:    conc3: 0.001000
13:46:12 DEBUG   opendrift.models.basemodel: Preparing readers for simulation coverage ([2.8872388556010833, 59.188460458291544, 6.1157537744037995, 60.80971611641549]) and time (2021-09-24 00:00:00 to 2021-09-25 00:00:00)
13:46:12 DEBUG   opendrift.models.basemodel:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:12 DEBUG   opendrift.readers.basereader: Nothing to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:12 INFO    opendrift.models.basemodel: Adding a dynamical landmask with max. priority based on assumed maximum speed of 1 m/s. Adding a customised landmask may be faster...
13:46:12 DEBUG   opendrift.readers.basereader: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
13:46:12 DEBUG   opendrift_landmask_data.mask: memmapping mask..
13:46:15 DEBUG   opendrift.models.basemodel: Added reader global_landmask
13:46:15 INFO    opendrift.models.basemodel: Using existing reader for land_binary_mask
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:15 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:15 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:15 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:15 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:15 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:15 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:15 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:15 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:15 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:15 DEBUG   opendrift.models.basemodel:            0 active elements
13:46:15 INFO    opendrift.models.basemodel: All points are in ocean
13:46:15 INFO    opendrift.models.radionuclides: Number of species: 5
13:46:15 INFO    opendrift.models.radionuclides:   0 LMM
13:46:15 INFO    opendrift.models.radionuclides:   1 Particle reversible
13:46:15 INFO    opendrift.models.radionuclides:   2 Particle slowly reversible
13:46:15 INFO    opendrift.models.radionuclides:   3 Sediment reversible
13:46:15 INFO    opendrift.models.radionuclides:   4 Sediment slowly reversible
13:46:15 INFO    opendrift.models.radionuclides: transfer setup: Bokna_137Cs
13:46:15 INFO    opendrift.models.radionuclides: nspecies: 5
13:46:15 INFO    opendrift.models.radionuclides: Transfer rates:
 [[0.00000e+00 2.32000e-08 0.00000e+00 2.17152e-03 0.00000e+00]
 [1.16000e-05 0.00000e+00 1.20000e-07 0.00000e+00 0.00000e+00]
 [0.00000e+00 1.20000e-08 0.00000e+00 0.00000e+00 0.00000e+00]
 [1.16000e-06 0.00000e+00 0.00000e+00 0.00000e+00 1.20000e-07]
 [0.00000e+00 0.00000e+00 0.00000e+00 1.20000e-08 0.00000e+00]]
13:46:15 DEBUG   opendrift.models.basemodel: to be seeded: 5000, already seeded 0
13:46:15 DEBUG   opendrift.models.basemodel: Released 5000 new elements.
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level']
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:15 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:15 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 00:00:00 (before)
                2021-09-24 01:00:00 (after)
13:46:15 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:15 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 23x22x2) for time before (2021-09-24 00:00:00)
13:46:15 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 00:00:00) in space  (linearNDFast)
13:46:15 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:15 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:15 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:15 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:15 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:15 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.675 (min) 299.876 (max)
13:46:15 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:15 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:15 DEBUG   opendrift.models.basemodel:            59.96684 <- latitude  -> 60.031338
13:46:15 DEBUG   opendrift.models.basemodel:            4.44399 <- longitude -> 4.5590024
13:46:15 DEBUG   opendrift.models.basemodel:            -9.99964   <- z ->   -0.0007244964
13:46:15 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:15 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:15 INFO    opendrift.models.basemodel: 2021-09-24 00:00:00 - step 1 of 48 - 5000 active elements (0 deactivated)
13:46:15 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:15 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:15 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:15 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:15 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:15 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 00:00:00 (before)
                2021-09-24 01:00:00 (after)
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 23x22x6) for time before (2021-09-24 00:00:00)
13:46:17 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 00:00:00) in space  (linearNDFast)
13:46:17 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:17 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:17 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.55602070386402 and -65.44100852054237 degrees.
13:46:17 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.55602070386402 and -65.44100852054237 degrees.
13:46:17 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:17 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:17 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:17 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:17 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:17 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:17 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:17 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:17 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:17 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:17 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:17 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.175722 (min) 0.314704 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0750155 (min) 0.170055 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     x_wind: 3.45116 (min) 3.94069 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     y_wind: -0.998359 (min) -0.671482 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.675 (min) 299.876 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 13.1074 (min) 13.5439 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1155 (min) 33.2284 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000338768 (min) 4.83336e-05 (max)
13:46:17 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:17 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:17 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:17 DEBUG   opendrift.models.basemodel:            59.96684 <- latitude  -> 60.031338
13:46:17 DEBUG   opendrift.models.basemodel:            4.44399 <- longitude -> 4.5590024
13:46:17 DEBUG   opendrift.models.basemodel:            -9.99964   <- z ->   -0.0007244964
13:46:17 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:17 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:17 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:17 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:17 INFO    opendrift.models.radionuclides: Number of transformations: 56
13:46:17 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:17 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:17 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[ 0.  0.  0.  0.  0.]
 [56.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:17 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:17 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.0146121425242424
13:46:17 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:17 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:17 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:17 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:17 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:17 INFO    opendrift.models.radionuclides: Speciation: [2306, 2694, 0, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:17 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.001604800938305719 and 0.42669666326404115 m/s
13:46:17 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:17 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:17 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:17 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:17 INFO    opendrift.models.basemodel: 2021-09-24 00:30:00 - step 2 of 48 - 5000 active elements (0 deactivated)
13:46:17 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:17 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:17 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:17 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:17 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:17 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 00:00:00 (before)
                2021-09-24 01:00:00 (after)
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 24x23x7) for time after (2021-09-24 01:00:00)
13:46:19 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 00:00:00) in space  (linearNDFast)
13:46:19 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:19 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 01:00:00) in space  (linearNDFast)
13:46:19 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:19 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 00:00:00, weight 0.50) and
                      after (2021-09-24 01:00:00, weight 0.50) in time
13:46:19 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:19 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.54702603548579 and -65.4279686909643 degrees.
13:46:19 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.54702603548579 and -65.4279686909643 degrees.
13:46:19 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:19 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:19 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:19 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:19 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:19 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.175584 (min) 0.310827 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0225792 (min) 0.124891 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     x_wind: 3.5543 (min) 3.94003 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     y_wind: 0.0755346 (min) 0.412086 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.832 (min) 299.999 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 13.095 (min) 13.5518 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0967 (min) 33.2615 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000664441 (min) 8.41758e-05 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:19 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:19 DEBUG   opendrift.models.basemodel:            59.96750764971097 <- latitude  -> 60.035827374051365
13:46:19 DEBUG   opendrift.models.basemodel:            4.452984888140347 <- longitude -> 4.572042225924329
13:46:19 DEBUG   opendrift.models.basemodel:            -28.33633129214454   <- z ->   -0.014945683383360553
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:19 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:19 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:19 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:19 INFO    opendrift.models.radionuclides: Number of transformations: 61
13:46:19 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:19 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:19 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   0.   0.   0.   0.]
 [117.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:19 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:19 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.01408567255425453
13:46:19 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:19 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:19 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:19 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:19 INFO    opendrift.models.radionuclides: Speciation: [2367, 2633, 0, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:19 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0031893728080263266 and 0.4550559548198029 m/s
13:46:19 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:19 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:19 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:19 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:19 INFO    opendrift.models.basemodel: 2021-09-24 01:00:00 - step 3 of 48 - 5000 active elements (0 deactivated)
13:46:19 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:19 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:19 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:19 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 01:00:00 (before)
                2021-09-24 02:00:00 (after)
13:46:19 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 01:00:00) in space  (linearNDFast)
13:46:19 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:19 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:19 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53950776238239 and -65.41814388499262 degrees.
13:46:19 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53950776238239 and -65.41814388499262 degrees.
13:46:19 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:19 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:19 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:19 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:19 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:19 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:19 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:19 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:19 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:19 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.152268 (min) 0.299069 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0226342 (min) 0.0840819 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     x_wind: 3.70431 (min) 3.96901 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     y_wind: 1.17497 (min) 1.49075 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.982 (min) 300.051 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 12.7521 (min) 13.5536 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1021 (min) 33.35 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000622232 (min) 0.000410647 (max)
13:46:19 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:19 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:19 DEBUG   opendrift.models.basemodel:            59.9682856532434 <- latitude  -> 60.03657509479552
13:46:19 DEBUG   opendrift.models.basemodel:            4.460503166064967 <- longitude -> 4.581867029868895
13:46:19 DEBUG   opendrift.models.basemodel:            -40.54087621080027   <- z ->   -0.06290522258800317
13:46:19 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:19 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:19 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:19 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:19 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:19 INFO    opendrift.models.radionuclides: Number of transformations: 59
13:46:19 DEBUG   opendrift.models.radionuclides: old species: [0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:19 DEBUG   opendrift.models.radionuclides: new species: [1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:19 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [173.   0.   2.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:19 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:19 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.015822527559936045
13:46:19 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:19 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:19 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:19 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:19 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:20 INFO    opendrift.models.radionuclides: Speciation: [2422, 2576, 2, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:20 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0011143190647267532 and 0.4196957010111082 m/s
13:46:20 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:20 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:20 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:20 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:20 INFO    opendrift.models.basemodel: 2021-09-24 01:30:00 - step 4 of 48 - 5000 active elements (0 deactivated)
13:46:20 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:20 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:20 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:20 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:20 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:20 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:20 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:20 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:20 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:20 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 01:00:00 (before)
                2021-09-24 02:00:00 (after)
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 23x22x7) for time after (2021-09-24 02:00:00)
13:46:21 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 01:00:00) in space  (linearNDFast)
13:46:21 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:21 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 02:00:00) in space  (linearNDFast)
13:46:21 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:21 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 01:00:00, weight 0.50) and
                      after (2021-09-24 02:00:00, weight 0.50) in time
13:46:21 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:21 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53389355151599 and -65.41215297547345 degrees.
13:46:21 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53389355151599 and -65.41215297547345 degrees.
13:46:21 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:21 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:21 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:21 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:21 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:21 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:21 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:21 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:21 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:21 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:21 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:21 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.10167 (min) 0.276163 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0283011 (min) 0.077722 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     x_wind: 4.13162 (min) 4.36618 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     y_wind: 2.83054 (min) 3.1208 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.133 (min) 300.07 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 12.6145 (min) 13.5522 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0831 (min) 33.417 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000385039 (min) 0.000442986 (max)
13:46:21 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:21 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:21 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:21 DEBUG   opendrift.models.basemodel:            59.96764629298791 <- latitude  -> 60.040965784950714
13:46:21 DEBUG   opendrift.models.basemodel:            4.466117381302052 <- longitude -> 4.587857950191272
13:46:21 DEBUG   opendrift.models.basemodel:            -42.50137644796441   <- z ->   -0.09926667390235089
13:46:21 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:21 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:21 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:21 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:21 INFO    opendrift.models.radionuclides: Number of transformations: 55
13:46:21 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:21 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:21 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [227.   0.   3.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:21 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:21 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.02546279025650024
13:46:21 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:21 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:21 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:21 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:21 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:21 INFO    opendrift.models.radionuclides: Speciation: [2476, 2521, 3, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:21 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0031504673456780484 and 0.4352102904197384 m/s
13:46:21 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:21 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:21 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:21 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:21 INFO    opendrift.models.basemodel: 2021-09-24 02:00:00 - step 5 of 48 - 5000 active elements (0 deactivated)
13:46:21 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:21 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:21 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:21 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:21 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:21 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 02:00:00 (before)
                2021-09-24 03:00:00 (after)
13:46:21 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 02:00:00) in space  (linearNDFast)
13:46:21 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:22 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:22 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53012187430424 and -65.40530216096707 degrees.
13:46:22 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.53012187430424 and -65.40530216096707 degrees.
13:46:22 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:22 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:22 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:22 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:22 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:22 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:22 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:22 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:22 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:22 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:22 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:22 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0773163 (min) 0.260328 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.034501 (min) 0.0959228 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     x_wind: 4.52562 (min) 4.82041 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     y_wind: 4.49187 (min) 4.74698 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.045 (min) 300.193 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 12.4861 (min) 13.5485 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.085 (min) 33.4484 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000326723 (min) 0.000787882 (max)
13:46:22 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:22 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:22 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:22 DEBUG   opendrift.models.basemodel:            59.96976737034743 <- latitude  -> 60.040373194358054
13:46:22 DEBUG   opendrift.models.basemodel:            4.469889056848371 <- longitude -> 4.594708758227428
13:46:22 DEBUG   opendrift.models.basemodel:            -45.126021168968734   <- z ->   0.0
13:46:22 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:22 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:22 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:22 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:22 INFO    opendrift.models.radionuclides: Number of transformations: 50
13:46:22 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:22 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 2 0]
13:46:22 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [276.   0.   4.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:22 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:22 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.04080656259441375
13:46:22 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:22 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:22 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:22 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:22 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:22 INFO    opendrift.models.radionuclides: Speciation: [2525, 2471, 4, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:22 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0033266084184943577 and 0.4344142024340668 m/s
13:46:22 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:22 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:22 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:22 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:22 INFO    opendrift.models.basemodel: 2021-09-24 02:30:00 - step 6 of 48 - 5000 active elements (0 deactivated)
13:46:22 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:22 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:22 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:22 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:22 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:22 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 02:00:00 (before)
                2021-09-24 03:00:00 (after)
13:46:23 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:23 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:23 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:23 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:23 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:23 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 25x23x7) for time after (2021-09-24 03:00:00)
13:46:23 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 02:00:00) in space  (linearNDFast)
13:46:23 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:23 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 03:00:00) in space  (linearNDFast)
13:46:23 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:23 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 02:00:00, weight 0.50) and
                      after (2021-09-24 03:00:00, weight 0.50) in time
13:46:23 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:24 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52431639892744 and -65.39970597213815 degrees.
13:46:24 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52431639892744 and -65.39970597213815 degrees.
13:46:24 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:24 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:24 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:24 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:24 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:24 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:24 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:24 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0815177 (min) 0.229385 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0268746 (min) 0.115021 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     x_wind: 4.29659 (min) 4.51035 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     y_wind: 5.63582 (min) 5.89462 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.996 (min) 300.216 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 12.0701 (min) 13.5505 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0812 (min) 33.487 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000278001 (min) 0.00073649 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:24 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:24 DEBUG   opendrift.models.basemodel:            59.97060556887282 <- latitude  -> 60.041549755009
13:46:24 DEBUG   opendrift.models.basemodel:            4.475694525897985 <- longitude -> 4.600304938141902
13:46:24 DEBUG   opendrift.models.basemodel:            -47.55692173621332   <- z ->   0.0
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:24 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:24 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:24 INFO    opendrift.models.radionuclides: Number of transformations: 44
13:46:24 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1]
13:46:24 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
 0 0 0 0 0 0 0]
13:46:24 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [319.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:24 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:24 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.049485436182260506
13:46:24 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:24 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:24 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:24 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:24 INFO    opendrift.models.radionuclides: Speciation: [2568, 2427, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:24 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0021842198048501646 and 0.4544078936349313 m/s
13:46:24 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:24 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:24 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:24 INFO    opendrift.models.basemodel: 2021-09-24 03:00:00 - step 7 of 48 - 5000 active elements (0 deactivated)
13:46:24 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:24 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:24 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:24 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 03:00:00 (before)
                2021-09-24 04:00:00 (after)
13:46:24 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 03:00:00) in space  (linearNDFast)
13:46:24 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:24 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:24 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5210371193848 and -65.38793257798068 degrees.
13:46:24 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5210371193848 and -65.38793257798068 degrees.
13:46:24 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:24 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:24 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:24 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:24 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:24 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:24 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:24 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:24 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0771173 (min) 0.228748 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.00813211 (min) 0.131859 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     x_wind: 4.04478 (min) 4.27672 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     y_wind: 6.74043 (min) 7.04662 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.023 (min) 300.272 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.9347 (min) 13.5578 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0836 (min) 33.4835 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000259522 (min) 0.000695183 (max)
13:46:24 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:24 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:24 DEBUG   opendrift.models.basemodel:            59.972205221741575 <- latitude  -> 60.04266982335764
13:46:24 DEBUG   opendrift.models.basemodel:            4.478973799577923 <- longitude -> 4.6120783251748465
13:46:24 DEBUG   opendrift.models.basemodel:            -47.6610143493613   <- z ->   0.0
13:46:24 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:24 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:24 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:24 INFO    opendrift.models.radionuclides: Number of transformations: 48
13:46:24 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1]
13:46:24 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0]
13:46:24 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [367.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:24 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:24 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.06076359993481636
13:46:24 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:24 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:24 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:24 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:24 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:24 INFO    opendrift.models.radionuclides: Speciation: [2616, 2379, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:24 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0015641955321112632 and 0.48469273570214455 m/s
13:46:24 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:24 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:24 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:24 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:24 INFO    opendrift.models.basemodel: 2021-09-24 03:30:00 - step 8 of 48 - 5000 active elements (0 deactivated)
13:46:24 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:24 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:24 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:24 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:24 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:24 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 03:00:00 (before)
                2021-09-24 04:00:00 (after)
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 25x24x7) for time after (2021-09-24 04:00:00)
13:46:26 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 03:00:00) in space  (linearNDFast)
13:46:26 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:26 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 04:00:00) in space  (linearNDFast)
13:46:26 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:26 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 03:00:00, weight 0.50) and
                      after (2021-09-24 04:00:00, weight 0.50) in time
13:46:26 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:26 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52566686095638 and -65.37894505475923 degrees.
13:46:26 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52566686095638 and -65.37894505475923 degrees.
13:46:26 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:26 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:26 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:26 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:26 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:26 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0849846 (min) 0.20658 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0105394 (min) 0.164914 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     x_wind: 3.79507 (min) 3.95215 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     y_wind: 8.07757 (min) 8.38113 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.266 (min) 300.258 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.838 (min) 13.5441 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.102 (min) 33.5331 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000252359 (min) 0.000532663 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:26 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:26 DEBUG   opendrift.models.basemodel:            59.97172024969332 <- latitude  -> 60.03961106135537
13:46:26 DEBUG   opendrift.models.basemodel:            4.4743440687853715 <- longitude -> 4.621065860287554
13:46:26 DEBUG   opendrift.models.basemodel:            -48.63935596763762   <- z ->   0.0
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:26 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:26 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:26 INFO    opendrift.models.radionuclides: Number of transformations: 49
13:46:26 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:26 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:26 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [416.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:26 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:26 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.07712181025886534
13:46:26 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:26 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:26 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:26 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:26 INFO    opendrift.models.radionuclides: Speciation: [2665, 2330, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:26 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0003624120941619915 and 0.43370272709746494 m/s
13:46:26 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:26 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:26 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:26 INFO    opendrift.models.basemodel: 2021-09-24 04:00:00 - step 9 of 48 - 5000 active elements (0 deactivated)
13:46:26 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:26 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:26 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:26 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 04:00:00 (before)
                2021-09-24 05:00:00 (after)
13:46:26 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 04:00:00) in space  (linearNDFast)
13:46:26 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:26 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:26 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52393968882039 and -65.373623275657 degrees.
13:46:26 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52393968882039 and -65.373623275657 degrees.
13:46:26 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:26 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:26 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:26 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:26 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:26 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:26 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:26 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:26 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0765793 (min) 0.187838 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.00805239 (min) 0.198184 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     x_wind: 3.41446 (min) 3.69882 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     y_wind: 9.41971 (min) 9.75158 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.361 (min) 300.378 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.64 (min) 13.5437 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0935 (min) 33.5692 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000557537 (min) 0.000643121 (max)
13:46:26 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:26 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:26 DEBUG   opendrift.models.basemodel:            59.97180312682242 <- latitude  -> 60.0425928664538
13:46:26 DEBUG   opendrift.models.basemodel:            4.4760712246962555 <- longitude -> 4.626387635383463
13:46:26 DEBUG   opendrift.models.basemodel:            -49.48040626202596   <- z ->   0.0
13:46:26 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:26 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:26 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:26 INFO    opendrift.models.radionuclides: Number of transformations: 37
13:46:26 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:26 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:26 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [453.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:26 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:26 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.09741237965726851
13:46:26 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:26 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:26 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:26 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:26 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:26 INFO    opendrift.models.radionuclides: Speciation: [2702, 2293, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:26 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0024013779448601538 and 0.44180948865733816 m/s
13:46:26 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:26 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:26 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:26 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:26 INFO    opendrift.models.basemodel: 2021-09-24 04:30:00 - step 10 of 48 - 5000 active elements (0 deactivated)
13:46:26 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:26 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:26 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:26 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:26 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:26 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 04:00:00 (before)
                2021-09-24 05:00:00 (after)
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 24x25x8) for time after (2021-09-24 05:00:00)
13:46:28 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 04:00:00) in space  (linearNDFast)
13:46:28 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:28 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 05:00:00) in space  (linearNDFast)
13:46:28 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:28 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 04:00:00, weight 0.50) and
                      after (2021-09-24 05:00:00, weight 0.50) in time
13:46:28 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:28 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52013731788023 and -65.36480266211454 degrees.
13:46:28 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52013731788023 and -65.36480266211454 degrees.
13:46:28 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:28 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:28 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:28 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:28 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:28 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:28 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:28 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:28 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:28 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:28 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:28 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:28 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:28 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:28 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:28 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:28 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:28 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:28 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0665739 (min) 0.187808 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0539523 (min) 0.219359 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     x_wind: 2.77891 (min) 2.9972 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     y_wind: 10.2147 (min) 10.5885 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.636 (min) 300.503 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.6792 (min) 13.5338 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0999 (min) 33.5582 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000535313 (min) 0.000588789 (max)
13:46:28 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:28 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:28 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:28 DEBUG   opendrift.models.basemodel:            59.97508296158796 <- latitude  -> 60.04471275683595
13:46:28 DEBUG   opendrift.models.basemodel:            4.47987359966974 <- longitude -> 4.635208246890286
13:46:28 DEBUG   opendrift.models.basemodel:            -50.560561053635766   <- z ->   0.0
13:46:28 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:28 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:28 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:28 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:28 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:28 INFO    opendrift.models.radionuclides: Number of transformations: 54
13:46:29 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:29 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:29 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [507.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:29 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:29 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.10826644370412826
13:46:29 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:29 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:29 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:29 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:29 INFO    opendrift.models.radionuclides: Speciation: [2756, 2239, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:29 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0006633028011691163 and 0.4455299630389153 m/s
13:46:29 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:29 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:29 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:29 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:29 INFO    opendrift.models.basemodel: 2021-09-24 05:00:00 - step 11 of 48 - 5000 active elements (0 deactivated)
13:46:29 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:29 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:29 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:29 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 05:00:00 (before)
                2021-09-24 06:00:00 (after)
13:46:29 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 05:00:00) in space  (linearNDFast)
13:46:29 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:29 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:29 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52245244441066 and -65.36078000621245 degrees.
13:46:29 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.52245244441066 and -65.36078000621245 degrees.
13:46:29 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:29 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:29 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:29 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:29 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:29 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:29 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:29 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:29 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:29 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:29 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:29 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0604132 (min) 0.20382 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.111768 (min) 0.267865 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     x_wind: 1.9908 (min) 2.38923 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     y_wind: 10.9721 (min) 11.4287 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 297.886 (min) 300.617 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7803 (min) 13.5297 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.098 (min) 33.5733 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000928115 (min) 0.000765601 (max)
13:46:29 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:29 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:29 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:29 DEBUG   opendrift.models.basemodel:            59.977232554854595 <- latitude  -> 60.04849474805445
13:46:29 DEBUG   opendrift.models.basemodel:            4.477558469080608 <- longitude -> 4.6392309003888315
13:46:29 DEBUG   opendrift.models.basemodel:            -50.41869880129198   <- z ->   0.0
13:46:29 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:29 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:29 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:29 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:29 INFO    opendrift.models.radionuclides: Number of transformations: 43
13:46:29 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1]
13:46:29 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0]
13:46:29 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [550.   0.   5.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:29 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:29 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.12158192269706725
13:46:29 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:29 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:29 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:29 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:29 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:29 INFO    opendrift.models.radionuclides: Speciation: [2799, 2196, 5, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:29 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0032224099311089073 and 0.4538173309941261 m/s
13:46:29 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:29 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:29 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:29 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:29 INFO    opendrift.models.basemodel: 2021-09-24 05:30:00 - step 12 of 48 - 5000 active elements (0 deactivated)
13:46:29 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:29 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:29 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:29 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:29 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:29 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 05:00:00 (before)
                2021-09-24 06:00:00 (after)
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 25x25x8) for time after (2021-09-24 06:00:00)
13:46:31 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 05:00:00) in space  (linearNDFast)
13:46:31 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:31 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 06:00:00) in space  (linearNDFast)
13:46:31 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:31 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 05:00:00, weight 0.50) and
                      after (2021-09-24 06:00:00, weight 0.50) in time
13:46:31 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:31 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51497326206992 and -65.35671534761704 degrees.
13:46:31 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51497326206992 and -65.35671534761704 degrees.
13:46:31 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:31 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:31 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:31 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:31 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:31 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0630835 (min) 0.200584 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.166149 (min) 0.318508 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     x_wind: 0.502466 (min) 0.806993 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     y_wind: 12.2745 (min) 12.702 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.027 (min) 300.687 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7357 (min) 13.5276 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1021 (min) 33.5871 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000819969 (min) 0.000463553 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:31 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:31 DEBUG   opendrift.models.basemodel:            59.981176974615465 <- latitude  -> 60.05187174981783
13:46:31 DEBUG   opendrift.models.basemodel:            4.485037665451189 <- longitude -> 4.643295558757967
13:46:31 DEBUG   opendrift.models.basemodel:            -50.996575718899635   <- z ->   -0.04849242785455665
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:31 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:31 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:31 INFO    opendrift.models.radionuclides: Number of transformations: 49
13:46:31 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:31 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 2 0 0 0 0 0 0 0 0 0 0]
13:46:31 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [598.   0.   6.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:31 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:31 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.14598935422754286
13:46:31 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:31 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:31 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:31 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:31 INFO    opendrift.models.radionuclides: Speciation: [2847, 2147, 6, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:31 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.00285506352929659 and 0.4348093742533208 m/s
13:46:31 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:31 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:31 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:31 INFO    opendrift.models.basemodel: 2021-09-24 06:00:00 - step 13 of 48 - 5000 active elements (0 deactivated)
13:46:31 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:31 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:31 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:31 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 06:00:00 (before)
                2021-09-24 07:00:00 (after)
13:46:31 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 06:00:00) in space  (linearNDFast)
13:46:31 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:31 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:31 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5159688297162 and -65.35362767457467 degrees.
13:46:31 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5159688297162 and -65.35362767457467 degrees.
13:46:31 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:31 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:31 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:31 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:31 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:31 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:31 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:31 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:31 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0478068 (min) 0.210818 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.219872 (min) 0.39731 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     x_wind: -0.998452 (min) -0.728374 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     y_wind: 13.5845 (min) 14.0038 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.182 (min) 300.736 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7863 (min) 13.5186 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0847 (min) 33.57 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000899986 (min) 0.000315971 (max)
13:46:31 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:31 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:31 DEBUG   opendrift.models.basemodel:            59.984645949153645 <- latitude  -> 60.05649727304339
13:46:31 DEBUG   opendrift.models.basemodel:            4.484042081853686 <- longitude -> 4.646383236518924
13:46:31 DEBUG   opendrift.models.basemodel:            -51.372685334709054   <- z ->   0.0
13:46:31 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:31 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:31 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:31 INFO    opendrift.models.radionuclides: Number of transformations: 40
13:46:31 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1]
13:46:31 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0]
13:46:31 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [638.   0.   6.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:31 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:31 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.178056498547554
13:46:31 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:31 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:31 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:31 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:31 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:31 INFO    opendrift.models.radionuclides: Speciation: [2887, 2107, 6, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:31 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0032443578905012524 and 0.4321112075497648 m/s
13:46:31 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:31 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:31 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:31 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:31 INFO    opendrift.models.basemodel: 2021-09-24 06:30:00 - step 14 of 48 - 5000 active elements (0 deactivated)
13:46:31 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:31 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:31 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:31 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:31 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:31 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 06:00:00 (before)
                2021-09-24 07:00:00 (after)
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 25x26x8) for time after (2021-09-24 07:00:00)
13:46:33 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 06:00:00) in space  (linearNDFast)
13:46:33 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:33 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 07:00:00) in space  (linearNDFast)
13:46:33 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:33 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 06:00:00, weight 0.50) and
                      after (2021-09-24 07:00:00, weight 0.50) in time
13:46:33 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:33 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51468114696709 and -65.34681716595266 degrees.
13:46:33 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51468114696709 and -65.34681716595266 degrees.
13:46:33 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:33 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:33 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:33 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:33 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:33 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:33 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:33 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:33 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:33 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:33 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:33 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:33 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:33 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:33 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:33 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:33 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:33 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:33 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0450064 (min) 0.199486 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.250692 (min) 0.45931 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     x_wind: -0.0694987 (min) 0.917385 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     y_wind: 13.5123 (min) 14.2287 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.39 (min) 300.799 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7901 (min) 13.5204 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1161 (min) 33.5803 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000580114 (min) 0.000266572 (max)
13:46:33 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:33 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:33 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:33 DEBUG   opendrift.models.basemodel:            59.988509863314874 <- latitude  -> 60.063839111443954
13:46:33 DEBUG   opendrift.models.basemodel:            4.485329769835108 <- longitude -> 4.653193739965131
13:46:33 DEBUG   opendrift.models.basemodel:            -50.14841857301732   <- z ->   0.0
13:46:33 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:33 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:33 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:33 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:33 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:33 INFO    opendrift.models.radionuclides: Number of transformations: 42
13:46:33 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1]
13:46:33 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
 0 0 0 0 0]
13:46:33 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   1.   0.   0.   0.]
 [678.   0.   8.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:33 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:33 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:33 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:33 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:34 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.18291163774108884
13:46:34 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:34 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:34 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:34 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:34 INFO    opendrift.models.radionuclides: Speciation: [2927, 2065, 8, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:34 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0043966037357376555 and 0.4899928367529459 m/s
13:46:34 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:34 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:34 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:34 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:34 INFO    opendrift.models.basemodel: 2021-09-24 07:00:00 - step 15 of 48 - 5000 active elements (0 deactivated)
13:46:34 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:34 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:34 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:34 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 07:00:00 (before)
                2021-09-24 08:00:00 (after)
13:46:34 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 07:00:00) in space  (linearNDFast)
13:46:34 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:34 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:34 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51575541565585 and -65.3438308492196 degrees.
13:46:34 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51575541565585 and -65.3438308492196 degrees.
13:46:34 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:34 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:34 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:34 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:34 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:34 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:34 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:34 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:34 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:34 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:34 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:34 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0531435 (min) 0.194457 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.270945 (min) 0.540429 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     x_wind: 0.570259 (min) 2.77416 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     y_wind: 13.08 (min) 14.6567 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.596 (min) 300.803 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7719 (min) 13.5136 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1104 (min) 33.5864 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000380745 (min) 0.000308206 (max)
13:46:34 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:34 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:34 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:34 DEBUG   opendrift.models.basemodel:            59.992022624167376 <- latitude  -> 60.067474088848826
13:46:34 DEBUG   opendrift.models.basemodel:            4.484255502105912 <- longitude -> 4.656180049408039
13:46:34 DEBUG   opendrift.models.basemodel:            -50.41904744565275   <- z ->   0.0
13:46:34 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:34 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:34 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:34 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:34 INFO    opendrift.models.radionuclides: Number of transformations: 36
13:46:34 DEBUG   opendrift.models.radionuclides: old species: [0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:34 DEBUG   opendrift.models.radionuclides: new species: [1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:34 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   2.   0.   0.   0.]
 [713.   0.   8.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:34 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:34 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1946833574352264
13:46:34 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:34 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:34 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:34 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:34 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:34 INFO    opendrift.models.radionuclides: Speciation: [2961, 2031, 8, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:34 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.002137977886914563 and 0.4444213015207039 m/s
13:46:34 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:34 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:34 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:34 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:34 INFO    opendrift.models.basemodel: 2021-09-24 07:30:00 - step 16 of 48 - 5000 active elements (0 deactivated)
13:46:34 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:34 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:34 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:34 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:34 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:34 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 07:00:00 (before)
                2021-09-24 08:00:00 (after)
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 25x26x8) for time after (2021-09-24 08:00:00)
13:46:36 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 07:00:00) in space  (linearNDFast)
13:46:36 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:36 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 08:00:00) in space  (linearNDFast)
13:46:36 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:36 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 07:00:00, weight 0.50) and
                      after (2021-09-24 08:00:00, weight 0.50) in time
13:46:36 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:36 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51670726535758 and -65.33908392660985 degrees.
13:46:36 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.51670726535758 and -65.33908392660985 degrees.
13:46:36 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:36 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:36 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:36 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:36 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:36 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.079769 (min) 0.215263 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.290315 (min) 0.569299 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     x_wind: 4.15537 (min) 5.40493 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     y_wind: 11.5114 (min) 12.1969 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.699 (min) 300.799 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.692 (min) 13.5117 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1078 (min) 33.583 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000366816 (min) 0.00051088 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:36 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:36 DEBUG   opendrift.models.basemodel:            59.99716715888053 <- latitude  -> 60.074754220156024
13:46:36 DEBUG   opendrift.models.basemodel:            4.483303644855884 <- longitude -> 4.6609269632940995
13:46:36 DEBUG   opendrift.models.basemodel:            -50.78333820901177   <- z ->   0.0
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:36 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:36 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:36 INFO    opendrift.models.radionuclides: Number of transformations: 63
13:46:36 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:36 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:36 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   2.   0.   0.   0.]
 [776.   0.   8.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:36 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:36 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.15111570642757413
13:46:36 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:36 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:36 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:36 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:36 INFO    opendrift.models.radionuclides: Speciation: [3024, 1968, 8, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:36 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0017538623858743298 and 0.45188170706219966 m/s
13:46:36 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:36 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:36 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:36 INFO    opendrift.models.basemodel: 2021-09-24 08:00:00 - step 17 of 48 - 5000 active elements (0 deactivated)
13:46:36 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:36 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:36 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:36 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 08:00:00 (before)
                2021-09-24 09:00:00 (after)
13:46:36 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 08:00:00) in space  (linearNDFast)
13:46:36 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:36 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:36 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5157619531043 and -65.33371136840418 degrees.
13:46:36 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.5157619531043 and -65.33371136840418 degrees.
13:46:36 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:36 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:36 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:36 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:36 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:36 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:36 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:36 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:36 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0826961 (min) 0.271919 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.31157 (min) 0.60532 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     x_wind: 7.75984 (min) 8.10963 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     y_wind: 9.60147 (min) 9.78843 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.688 (min) 300.81 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7206 (min) 13.51 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0994 (min) 33.5797 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000571268 (min) 0.000526509 (max)
13:46:36 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:36 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:36 DEBUG   opendrift.models.basemodel:            60.00279669372598 <- latitude  -> 60.08151495107967
13:46:36 DEBUG   opendrift.models.basemodel:            4.484248956723353 <- longitude -> 4.666299536220139
13:46:36 DEBUG   opendrift.models.basemodel:            -50.34754520817397   <- z ->   0.0
13:46:36 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:36 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:36 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:36 INFO    opendrift.models.radionuclides: Number of transformations: 47
13:46:36 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1]
13:46:36 DEBUG   opendrift.models.radionuclides: new species: [2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0]
13:46:36 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   2.   0.   0.   0.]
 [822.   0.   9.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:36 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:36 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1454899984960556
13:46:36 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:36 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:36 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:36 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:36 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:36 INFO    opendrift.models.radionuclides: Speciation: [3070, 1921, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:36 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0007635869321235863 and 0.4654918507260202 m/s
13:46:36 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:36 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:36 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:36 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:36 INFO    opendrift.models.basemodel: 2021-09-24 08:30:00 - step 18 of 48 - 5000 active elements (0 deactivated)
13:46:36 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:36 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:36 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:36 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:36 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:36 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 08:00:00 (before)
                2021-09-24 09:00:00 (after)
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 26x26x8) for time after (2021-09-24 09:00:00)
13:46:38 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 08:00:00) in space  (linearNDFast)
13:46:38 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:38 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 09:00:00) in space  (linearNDFast)
13:46:38 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:38 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 08:00:00, weight 0.50) and
                      after (2021-09-24 09:00:00, weight 0.50) in time
13:46:38 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:38 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50881034984157 and -65.32534729574661 degrees.
13:46:38 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50881034984157 and -65.32534729574661 degrees.
13:46:38 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:38 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:38 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:38 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:38 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:38 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:38 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:38 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:38 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:38 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:38 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:38 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:38 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:38 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:38 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:38 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:38 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:38 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:38 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0898037 (min) 0.301339 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.308981 (min) 0.595171 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     x_wind: 8.35827 (min) 8.9511 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     y_wind: 9.65251 (min) 9.8402 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.82 (min) 300.817 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.5792 (min) 13.5083 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1188 (min) 33.6062 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000371912 (min) 0.000749387 (max)
13:46:38 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:38 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:38 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:38 DEBUG   opendrift.models.basemodel:            60.00929306841947 <- latitude  -> 60.089785445898045
13:46:38 DEBUG   opendrift.models.basemodel:            4.491200559307041 <- longitude -> 4.6746635933163905
13:46:38 DEBUG   opendrift.models.basemodel:            -51.23038566749991   <- z ->   0.0
13:46:38 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:38 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:38 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:38 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:38 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:39 INFO    opendrift.models.radionuclides: Number of transformations: 42
13:46:39 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
 1 1 1 1 1]
13:46:39 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
 0 0 0 0 0]
13:46:39 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   3.   0.   0.   0.]
 [863.   0.   9.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:39 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:39 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.15684822936344145
13:46:39 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:39 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:39 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:39 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:39 INFO    opendrift.models.radionuclides: Speciation: [3110, 1881, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:39 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0012816052025406176 and 0.41248491033463863 m/s
13:46:39 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:39 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:39 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:39 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:39 INFO    opendrift.models.basemodel: 2021-09-24 09:00:00 - step 19 of 48 - 5000 active elements (0 deactivated)
13:46:39 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:39 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:39 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:39 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 09:00:00 (before)
                2021-09-24 10:00:00 (after)
13:46:39 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 09:00:00) in space  (linearNDFast)
13:46:39 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:39 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:39 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50661456978173 and -65.31426121971576 degrees.
13:46:39 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50661456978173 and -65.31426121971576 degrees.
13:46:39 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:39 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:39 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:39 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:39 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:39 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:39 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:39 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:39 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:39 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:39 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:39 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0847895 (min) 0.382085 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.299615 (min) 0.622276 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     x_wind: 8.85122 (min) 9.88966 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     y_wind: 9.55487 (min) 10 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.771 (min) 300.833 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.4258 (min) 13.5079 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0947 (min) 33.6133 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000374668 (min) 0.000948285 (max)
13:46:39 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:39 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:39 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:39 DEBUG   opendrift.models.basemodel:            60.01829504019791 <- latitude  -> 60.09534691570028
13:46:39 DEBUG   opendrift.models.basemodel:            4.493396346710983 <- longitude -> 4.685749671243017
13:46:39 DEBUG   opendrift.models.basemodel:            -50.35924940048229   <- z ->   0.0
13:46:39 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:39 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:39 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:39 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:39 INFO    opendrift.models.radionuclides: Number of transformations: 47
13:46:39 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1]
13:46:39 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0]
13:46:39 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   3.   0.   0.   0.]
 [910.   0.   9.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:39 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:39 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.17084034168434142
13:46:39 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:39 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:39 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:39 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:39 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:39 INFO    opendrift.models.radionuclides: Speciation: [3157, 1834, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:39 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.002361822067604866 and 0.5299383243373539 m/s
13:46:39 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:39 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:39 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:39 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:39 INFO    opendrift.models.basemodel: 2021-09-24 09:30:00 - step 20 of 48 - 5000 active elements (0 deactivated)
13:46:39 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:39 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:39 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:39 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:39 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:39 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 09:00:00 (before)
                2021-09-24 10:00:00 (after)
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 26x28x8) for time after (2021-09-24 10:00:00)
13:46:41 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 09:00:00) in space  (linearNDFast)
13:46:41 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:41 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 10:00:00) in space  (linearNDFast)
13:46:41 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:41 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 09:00:00, weight 0.50) and
                      after (2021-09-24 10:00:00, weight 0.50) in time
13:46:41 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:41 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50261934825933 and -65.30293747878882 degrees.
13:46:41 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.50261934825933 and -65.30293747878882 degrees.
13:46:41 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:41 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:41 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:41 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:41 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:41 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0988132 (min) 0.403036 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.284347 (min) 0.561326 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     x_wind: 10.1955 (min) 11.0024 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     y_wind: 8.32378 (min) 8.86397 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.766 (min) 301.026 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.5013 (min) 13.5054 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0983 (min) 33.5924 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000476865 (min) 0.00091285 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:41 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:41 DEBUG   opendrift.models.basemodel:            60.024222041262604 <- latitude  -> 60.106859256915016
13:46:41 DEBUG   opendrift.models.basemodel:            4.497391556774807 <- longitude -> 4.697073408207111
13:46:41 DEBUG   opendrift.models.basemodel:            -50.701945090416   <- z ->   0.0
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:41 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:41 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:41 INFO    opendrift.models.radionuclides: Number of transformations: 46
13:46:41 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1]
13:46:41 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0]
13:46:41 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   3.   0.   0.   0.]
 [956.   0.   9.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:41 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:41 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.17265109435558318
13:46:41 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:41 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:41 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:41 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:41 INFO    opendrift.models.radionuclides: Speciation: [3203, 1788, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:41 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0013004302251642189 and 0.4627370505541762 m/s
13:46:41 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:41 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:41 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:41 INFO    opendrift.models.basemodel: 2021-09-24 10:00:00 - step 21 of 48 - 5000 active elements (0 deactivated)
13:46:41 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:41 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:41 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:41 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 10:00:00 (before)
                2021-09-24 11:00:00 (after)
13:46:41 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 10:00:00) in space  (linearNDFast)
13:46:41 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:41 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:41 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.4978540266657 and -65.2974943634563 degrees.
13:46:41 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.4978540266657 and -65.2974943634563 degrees.
13:46:41 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:41 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:41 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:41 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:41 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:41 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:41 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:41 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:41 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0756622 (min) 0.465533 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.267974 (min) 0.522635 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     x_wind: 11.4987 (min) 12.0624 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     y_wind: 7.08514 (min) 7.69233 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.354 (min) 301.933 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.5307 (min) 13.51 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0895 (min) 33.5888 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000717122 (min) 0.000913846 (max)
13:46:41 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:41 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:41 DEBUG   opendrift.models.basemodel:            60.03001799582838 <- latitude  -> 60.11499276031169
13:46:41 DEBUG   opendrift.models.basemodel:            4.502156871184336 <- longitude -> 4.702516522935378
13:46:41 DEBUG   opendrift.models.basemodel:            -49.87114845758324   <- z ->   0.0
13:46:41 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:41 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:41 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:41 INFO    opendrift.models.radionuclides: Number of transformations: 33
13:46:41 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:41 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:41 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[  0.   3.   0.   0.   0.]
 [989.   0.   9.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:41 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:41 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1806965064153671
13:46:41 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:41 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:41 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:41 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:41 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:41 INFO    opendrift.models.radionuclides: Speciation: [3236, 1755, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:41 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0015433741051240736 and 0.44371796356174725 m/s
13:46:41 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:41 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:41 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:41 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:41 INFO    opendrift.models.basemodel: 2021-09-24 10:30:00 - step 22 of 48 - 5000 active elements (0 deactivated)
13:46:41 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:41 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:41 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:41 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:41 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:41 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 10:00:00 (before)
                2021-09-24 11:00:00 (after)
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 26x27x8) for time after (2021-09-24 11:00:00)
13:46:44 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 10:00:00) in space  (linearNDFast)
13:46:44 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:44 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 11:00:00) in space  (linearNDFast)
13:46:44 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:44 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 10:00:00, weight 0.50) and
                      after (2021-09-24 11:00:00, weight 0.50) in time
13:46:44 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:44 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.48927609655803 and -65.28718780228148 degrees.
13:46:44 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.48927609655803 and -65.28718780228148 degrees.
13:46:44 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:44 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:44 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:44 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:44 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:44 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0524228 (min) 0.510018 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.252428 (min) 0.447199 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     x_wind: 12.0801 (min) 12.6051 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     y_wind: 6.51548 (min) 6.83357 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.178 (min) 303.29 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7446 (min) 13.5136 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.118 (min) 33.5656 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000541793 (min) 0.000633753 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:44 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:44 DEBUG   opendrift.models.basemodel:            60.035779949959874 <- latitude  -> 60.121789872410496
13:46:44 DEBUG   opendrift.models.basemodel:            4.510734800487477 <- longitude -> 4.712823063448306
13:46:44 DEBUG   opendrift.models.basemodel:            -50.030505438731126   <- z ->   0.0
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:44 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:44 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:44 INFO    opendrift.models.radionuclides: Number of transformations: 48
13:46:44 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1 1 1 1 1 1 1]
13:46:44 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0 0 0 0 0 0 0]
13:46:44 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1037.    0.    9.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:44 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:44 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.18306912366485595
13:46:44 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:44 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:44 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:44 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:44 INFO    opendrift.models.radionuclides: Speciation: [3284, 1707, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:44 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0009612228483642599 and 0.41576100462610555 m/s
13:46:44 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:44 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:44 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:44 INFO    opendrift.models.basemodel: 2021-09-24 11:00:00 - step 23 of 48 - 5000 active elements (0 deactivated)
13:46:44 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:44 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:44 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:44 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 11:00:00 (before)
                2021-09-24 12:00:00 (after)
13:46:44 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 11:00:00) in space  (linearNDFast)
13:46:44 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:44 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:44 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.47860294776224 and -65.27769610015412 degrees.
13:46:44 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.47860294776224 and -65.27769610015412 degrees.
13:46:44 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:44 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:44 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:44 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:44 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:44 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:44 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:44 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:44 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0385211 (min) 0.556717 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.215357 (min) 0.380891 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     x_wind: 12.4921 (min) 13.1901 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     y_wind: 5.82394 (min) 6.07504 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.176 (min) 305.339 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.731 (min) 13.5142 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0943 (min) 33.5687 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000885158 (min) 0.000544169 (max)
13:46:44 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:44 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:44 DEBUG   opendrift.models.basemodel:            60.04032220402465 <- latitude  -> 60.12775839445901
13:46:44 DEBUG   opendrift.models.basemodel:            4.5214079500839075 <- longitude -> 4.7223147635670015
13:46:44 DEBUG   opendrift.models.basemodel:            -50.43960730837556   <- z ->   0.0
13:46:44 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:44 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:44 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:44 INFO    opendrift.models.radionuclides: Number of transformations: 40
13:46:44 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1]
13:46:44 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0]
13:46:44 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1077.    0.    9.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:44 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:44 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.18782089065170288
13:46:44 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:44 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:44 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:44 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:44 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:44 INFO    opendrift.models.radionuclides: Speciation: [3324, 1667, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:44 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.003449556853080646 and 0.38152852413199234 m/s
13:46:44 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:44 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:44 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:44 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:44 INFO    opendrift.models.basemodel: 2021-09-24 11:30:00 - step 24 of 48 - 5000 active elements (0 deactivated)
13:46:44 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:44 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:44 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:44 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:44 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:44 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 11:00:00 (before)
                2021-09-24 12:00:00 (after)
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 27x27x8) for time after (2021-09-24 12:00:00)
13:46:46 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 11:00:00) in space  (linearNDFast)
13:46:46 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:46 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 12:00:00) in space  (linearNDFast)
13:46:46 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:46 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 11:00:00, weight 0.50) and
                      after (2021-09-24 12:00:00, weight 0.50) in time
13:46:46 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:46 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.46845234512425 and -65.27113962574465 degrees.
13:46:46 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.46845234512425 and -65.27113962574465 degrees.
13:46:46 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:46 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:46 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:46 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:46 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:46 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: 0.0195535 (min) 0.529321 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.179279 (min) 0.307254 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     x_wind: 12.5769 (min) 12.9835 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     y_wind: 5.19806 (min) 5.43918 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.077 (min) 307.308 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7228 (min) 13.5179 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.078 (min) 33.5454 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000885476 (min) 0.000285051 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:46 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:46 DEBUG   opendrift.models.basemodel:            60.04540900097251 <- latitude  -> 60.1318000125228
13:46:46 DEBUG   opendrift.models.basemodel:            4.531558545554976 <- longitude -> 4.728871258082512
13:46:46 DEBUG   opendrift.models.basemodel:            -50.87404154834324   <- z ->   -0.07252483567969037
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:46 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:46 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:46 INFO    opendrift.models.radionuclides: Number of transformations: 38
13:46:46 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1]
13:46:46 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0]
13:46:46 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1115.    0.    9.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:46 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:46 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.177224859875679
13:46:46 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:46 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:46 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:46 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:46 INFO    opendrift.models.radionuclides: Speciation: [3362, 1629, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:46 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.00039815833380295475 and 0.5048344634942804 m/s
13:46:46 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:46 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:46 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:46 INFO    opendrift.models.basemodel: 2021-09-24 12:00:00 - step 25 of 48 - 5000 active elements (0 deactivated)
13:46:46 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:46 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:46 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:46 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 12:00:00 (before)
                2021-09-24 13:00:00 (after)
13:46:46 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 12:00:00) in space  (linearNDFast)
13:46:46 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:46 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:46 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45401766720646 and -65.26277355016681 degrees.
13:46:46 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45401766720646 and -65.26277355016681 degrees.
13:46:46 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:46 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:46 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:46 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:46 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:46 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:46 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:46 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:46 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0123575 (min) 0.534249 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.100111 (min) 0.293891 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     x_wind: 12.5928 (min) 12.8946 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     y_wind: 4.53554 (min) 4.85636 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.077 (min) 309.093 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7891 (min) 13.5194 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0764 (min) 33.5391 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00106571 (min) 0.000491487 (max)
13:46:46 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:46 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:46 DEBUG   opendrift.models.basemodel:            60.049168605129594 <- latitude  -> 60.13726180325068
13:46:46 DEBUG   opendrift.models.basemodel:            4.545993229172182 <- longitude -> 4.737237321570115
13:46:46 DEBUG   opendrift.models.basemodel:            -51.125689297118385   <- z ->   0.0
13:46:46 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:46 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:46 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:46 INFO    opendrift.models.radionuclides: Number of transformations: 25
13:46:46 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:46 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:46 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1140.    0.    9.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:46 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:46 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.16932109687042235
13:46:46 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:46 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:46 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:46 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:46 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:46 INFO    opendrift.models.radionuclides: Speciation: [3387, 1604, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:46 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.003934895673392609 and 0.4492894122531136 m/s
13:46:46 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:46 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:46 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:46 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:46 INFO    opendrift.models.basemodel: 2021-09-24 12:30:00 - step 26 of 48 - 5000 active elements (0 deactivated)
13:46:46 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:46 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:46 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:46 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:46 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:46 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 12:00:00 (before)
                2021-09-24 13:00:00 (after)
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 27x27x8) for time after (2021-09-24 13:00:00)
13:46:48 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 12:00:00) in space  (linearNDFast)
13:46:48 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:48 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 13:00:00) in space  (linearNDFast)
13:46:48 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:48 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 12:00:00, weight 0.50) and
                      after (2021-09-24 13:00:00, weight 0.50) in time
13:46:48 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:48 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45369365863505 and -65.25381410547197 degrees.
13:46:48 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45369365863505 and -65.25381410547197 degrees.
13:46:48 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:48 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:48 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:48 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:48 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:48 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0436055 (min) 0.497081 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0358152 (min) 0.307247 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     x_wind: 11.8669 (min) 12.6337 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     y_wind: 3.76735 (min) 4.22041 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.088 (min) 310.827 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.8159 (min) 13.5172 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0823 (min) 33.5454 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000922266 (min) 0.000361952 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:48 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:48 DEBUG   opendrift.models.basemodel:            60.05225119615697 <- latitude  -> 60.13986919215564
13:46:48 DEBUG   opendrift.models.basemodel:            4.546317237709403 <- longitude -> 4.746196772377381
13:46:48 DEBUG   opendrift.models.basemodel:            -50.386053628121545   <- z ->   0.0
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:48 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:48 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:48 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:48 INFO    opendrift.models.radionuclides: Number of transformations: 34
13:46:48 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:48 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:48 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1174.    0.    9.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:48 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:48 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.15702854368400573
13:46:48 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:48 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:48 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:48 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:48 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:48 INFO    opendrift.models.radionuclides: Speciation: [3421, 1570, 9, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:48 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0006816804920692008 and 0.5119292535740191 m/s
13:46:48 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:48 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:48 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:48 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:48 INFO    opendrift.models.basemodel: 2021-09-24 13:00:00 - step 27 of 48 - 5000 active elements (0 deactivated)
13:46:48 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:48 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:48 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:48 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 13:00:00 (before)
                2021-09-24 14:00:00 (after)
13:46:48 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 13:00:00) in space  (linearNDFast)
13:46:48 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:48 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:48 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44786209298222 and -65.24115435084718 degrees.
13:46:48 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44786209298222 and -65.24115435084718 degrees.
13:46:48 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:48 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:48 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:48 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:48 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:48 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:48 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:48 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:48 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:48 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0648729 (min) 0.454854 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0229461 (min) 0.308212 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     x_wind: 11.2091 (min) 12.3807 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     y_wind: 2.93597 (min) 3.61296 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.1 (min) 312.783 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.8475 (min) 13.5203 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0862 (min) 33.5563 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00106892 (min) 0.000667398 (max)
13:46:48 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:48 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:48 DEBUG   opendrift.models.basemodel:            60.05286901493993 <- latitude  -> 60.1450795046179
13:46:48 DEBUG   opendrift.models.basemodel:            4.552148799049525 <- longitude -> 4.758856530305147
13:46:48 DEBUG   opendrift.models.basemodel:            -51.38246816563181   <- z ->   -0.1021640303218776
13:46:48 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:48 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:48 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:48 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:48 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:48 INFO    opendrift.models.radionuclides: Number of transformations: 26
13:46:49 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:49 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:49 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1199.    0.   10.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:49 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:49 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1466171881055832
13:46:49 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:49 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:49 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:49 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:49 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:49 INFO    opendrift.models.radionuclides: Speciation: [3446, 1544, 10, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:49 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0028067229243165337 and 0.4540602561751229 m/s
13:46:49 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:49 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:49 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:49 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:49 INFO    opendrift.models.basemodel: 2021-09-24 13:30:00 - step 28 of 48 - 5000 active elements (0 deactivated)
13:46:49 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:49 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:49 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:49 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:49 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:49 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:49 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:49 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:49 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:49 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 13:00:00 (before)
                2021-09-24 14:00:00 (after)
13:46:50 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:50 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:50 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:50 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:50 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:50 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 27x28x8) for time after (2021-09-24 14:00:00)
13:46:50 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 13:00:00) in space  (linearNDFast)
13:46:50 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:50 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 14:00:00) in space  (linearNDFast)
13:46:50 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:50 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 13:00:00, weight 0.50) and
                      after (2021-09-24 14:00:00, weight 0.50) in time
13:46:50 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:50 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44431309209135 and -65.23360168038627 degrees.
13:46:51 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44431309209135 and -65.23360168038627 degrees.
13:46:51 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:51 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:51 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:51 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:51 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:51 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:51 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:51 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0551832 (min) 0.377973 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0505628 (min) 0.317842 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     x_wind: 11.5493 (min) 12.3519 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     y_wind: 2.57543 (min) 2.86728 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.118 (min) 314.959 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7718 (min) 13.5225 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.087 (min) 33.5689 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000738842 (min) 0.000764558 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:51 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:51 DEBUG   opendrift.models.basemodel:            60.05500515977893 <- latitude  -> 60.15087413020759
13:46:51 DEBUG   opendrift.models.basemodel:            4.555697789191261 <- longitude -> 4.766409196758568
13:46:51 DEBUG   opendrift.models.basemodel:            -53.12976974521725   <- z ->   -0.17313946540581604
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:51 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:51 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:51 INFO    opendrift.models.radionuclides: Number of transformations: 42
13:46:51 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1]
13:46:51 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0]
13:46:51 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1241.    0.   10.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:51 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:51 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.14382931649208067
13:46:51 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:51 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:51 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:51 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:51 INFO    opendrift.models.radionuclides: Speciation: [3488, 1502, 10, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:51 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.002178955613525687 and 0.41247167511392335 m/s
13:46:51 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:51 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:51 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:51 INFO    opendrift.models.basemodel: 2021-09-24 14:00:00 - step 29 of 48 - 5000 active elements (0 deactivated)
13:46:51 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:51 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:51 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:51 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 14:00:00 (before)
                2021-09-24 15:00:00 (after)
13:46:51 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 14:00:00) in space  (linearNDFast)
13:46:51 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:51 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:51 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43478721896045 and -65.22384066804426 degrees.
13:46:51 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43478721896045 and -65.22384066804426 degrees.
13:46:51 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:51 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:51 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:51 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:51 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:51 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:51 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:51 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:51 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0541602 (min) 0.322296 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0985731 (min) 0.331743 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     x_wind: 11.5655 (min) 12.4891 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     y_wind: 1.87031 (min) 2.37686 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.1 (min) 315.962 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7185 (min) 13.5287 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0831 (min) 33.5641 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000730856 (min) 0.00100158 (max)
13:46:51 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:51 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:51 DEBUG   opendrift.models.basemodel:            60.055661861403564 <- latitude  -> 60.15319817159586
13:46:51 DEBUG   opendrift.models.basemodel:            4.565223670220498 <- longitude -> 4.776170206042673
13:46:51 DEBUG   opendrift.models.basemodel:            -54.14843791018729   <- z ->   -0.21297237361730126
13:46:51 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:51 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:51 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:51 INFO    opendrift.models.radionuclides: Number of transformations: 42
13:46:51 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
 1 1 1 1 1]
13:46:51 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 0 0 0 0 0]
13:46:51 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1283.    0.   10.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:51 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:51 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1457412256207466
13:46:51 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:51 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:51 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:51 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:51 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:51 INFO    opendrift.models.radionuclides: Speciation: [3530, 1460, 10, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:51 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.002182322937614996 and 0.4230433487696071 m/s
13:46:51 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:51 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:51 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:51 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:51 INFO    opendrift.models.basemodel: 2021-09-24 14:30:00 - step 30 of 48 - 5000 active elements (0 deactivated)
13:46:51 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:51 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:51 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:51 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:51 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:51 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 14:00:00 (before)
                2021-09-24 15:00:00 (after)
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 28x29x8) for time after (2021-09-24 15:00:00)
13:46:53 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 14:00:00) in space  (linearNDFast)
13:46:53 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:53 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 15:00:00) in space  (linearNDFast)
13:46:53 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:53 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 14:00:00, weight 0.50) and
                      after (2021-09-24 15:00:00, weight 0.50) in time
13:46:53 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:53 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43227668987566 and -65.22227380224227 degrees.
13:46:53 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43227668987566 and -65.22227380224227 degrees.
13:46:53 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:53 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:53 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:53 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:53 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:53 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0418545 (min) 0.243567 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.102195 (min) 0.346346 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     x_wind: 11.9091 (min) 12.2334 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     y_wind: 1.71335 (min) 2.40548 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.087 (min) 317.035 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.689 (min) 13.5285 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0854 (min) 33.5753 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000580949 (min) 0.000857172 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:53 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:53 DEBUG   opendrift.models.basemodel:            60.05608977706568 <- latitude  -> 60.15473275514706
13:46:53 DEBUG   opendrift.models.basemodel:            4.567734190176739 <- longitude -> 4.777737076963953
13:46:53 DEBUG   opendrift.models.basemodel:            -54.1209084003958   <- z ->   0.0
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:53 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:53 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:53 INFO    opendrift.models.radionuclides: Number of transformations: 22
13:46:53 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:53 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:53 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1304.    0.   11.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:53 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:53 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1386185098171234
13:46:53 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:53 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:53 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:53 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:53 INFO    opendrift.models.radionuclides: Speciation: [3551, 1438, 11, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:53 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0021433888063086617 and 0.44760624346794003 m/s
13:46:53 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:53 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:53 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:53 INFO    opendrift.models.basemodel: 2021-09-24 15:00:00 - step 31 of 48 - 5000 active elements (0 deactivated)
13:46:53 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:53 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:53 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:53 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 15:00:00 (before)
                2021-09-24 16:00:00 (after)
13:46:53 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 15:00:00) in space  (linearNDFast)
13:46:53 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:53 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:53 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42537436311595 and -65.21978782715587 degrees.
13:46:53 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42537436311595 and -65.21978782715587 degrees.
13:46:53 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:53 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:53 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:53 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:53 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:53 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:53 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:53 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:53 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0599429 (min) 0.186853 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.114458 (min) 0.373428 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     x_wind: 11.5172 (min) 12.3794 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     y_wind: 1.46702 (min) 2.62735 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.084 (min) 318.487 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.9168 (min) 13.5256 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0891 (min) 33.5299 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000533264 (min) 0.00100772 (max)
13:46:53 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:53 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:53 DEBUG   opendrift.models.basemodel:            60.056865138860616 <- latitude  -> 60.15887227060618
13:46:53 DEBUG   opendrift.models.basemodel:            4.574636518496915 <- longitude -> 4.780223037774188
13:46:53 DEBUG   opendrift.models.basemodel:            -51.93214260638493   <- z ->   0.0
13:46:53 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:53 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:53 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:53 INFO    opendrift.models.radionuclides: Number of transformations: 28
13:46:53 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:53 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:53 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1332.    0.   11.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:53 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:53 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1440726428375244
13:46:53 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:53 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:53 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:53 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:53 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:53 INFO    opendrift.models.radionuclides: Speciation: [3579, 1410, 11, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:53 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0006588035853627477 and 0.4890790355807421 m/s
13:46:53 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:53 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:53 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:53 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:53 INFO    opendrift.models.basemodel: 2021-09-24 15:30:00 - step 32 of 48 - 5000 active elements (0 deactivated)
13:46:53 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:53 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:53 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:53 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:53 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:53 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 15:00:00 (before)
                2021-09-24 16:00:00 (after)
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 28x29x8) for time after (2021-09-24 16:00:00)
13:46:55 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 15:00:00) in space  (linearNDFast)
13:46:55 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:55 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 16:00:00) in space  (linearNDFast)
13:46:55 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:55 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 15:00:00, weight 0.50) and
                      after (2021-09-24 16:00:00, weight 0.50) in time
13:46:55 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:55 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42489307872034 and -65.21821585492768 degrees.
13:46:55 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42489307872034 and -65.21821585492768 degrees.
13:46:55 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:55 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:55 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:55 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:55 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:55 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.100637 (min) 0.144161 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0603486 (min) 0.375607 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     x_wind: 11.3324 (min) 11.8351 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     y_wind: 0.834162 (min) 1.7045 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.092 (min) 318.858 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7225 (min) 13.5144 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0912 (min) 33.5412 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000452475 (min) 0.00110273 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:55 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:55 DEBUG   opendrift.models.basemodel:            60.0563605306253 <- latitude  -> 60.16267406093742
13:46:55 DEBUG   opendrift.models.basemodel:            4.575117809228817 <- longitude -> 4.781795011790011
13:46:55 DEBUG   opendrift.models.basemodel:            -51.080978018093795   <- z ->   0.0
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:55 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:55 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:55 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:55 INFO    opendrift.models.radionuclides: Number of transformations: 35
13:46:55 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:55 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0]
13:46:55 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1366.    0.   12.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:55 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:55 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.12829037283754346
13:46:55 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:55 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:55 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:55 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:55 INFO    opendrift.models.radionuclides: Speciation: [3613, 1375, 12, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:55 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0012830246778003057 and 0.42316206922644 m/s
13:46:55 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:55 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:55 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:55 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:55 INFO    opendrift.models.basemodel: 2021-09-24 16:00:00 - step 33 of 48 - 5000 active elements (0 deactivated)
13:46:55 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:55 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:55 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:55 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 16:00:00 (before)
                2021-09-24 17:00:00 (after)
13:46:55 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 16:00:00) in space  (linearNDFast)
13:46:55 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:55 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:55 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42176151604939 and -65.21539405873821 degrees.
13:46:55 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42176151604939 and -65.21539405873821 degrees.
13:46:55 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:55 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:55 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:55 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:55 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:55 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:55 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:55 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:55 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:55 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.130569 (min) 0.136071 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: -0.0232014 (min) 0.390732 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     x_wind: 10.8896 (min) 11.62 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     y_wind: 0.151472 (min) 0.763086 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.071 (min) 319.274 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.6559 (min) 13.5128 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0923 (min) 33.555 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00046767 (min) 0.00103275 (max)
13:46:55 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:55 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:55 DEBUG   opendrift.models.basemodel:            60.05474758262348 <- latitude  -> 60.16918898689121
13:46:55 DEBUG   opendrift.models.basemodel:            4.578249364702304 <- longitude -> 4.784616810155581
13:46:55 DEBUG   opendrift.models.basemodel:            -50.73779473660793   <- z ->   0.0
13:46:55 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:55 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:55 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:55 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:55 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:55 INFO    opendrift.models.radionuclides: Number of transformations: 32
13:46:55 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:55 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0]
13:46:55 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1397.    0.   13.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:55 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:55 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.12203154324388503
13:46:55 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:55 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:55 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:55 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:55 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:56 INFO    opendrift.models.radionuclides: Speciation: [3644, 1343, 13, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:56 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0008626550048619941 and 0.4792100338303588 m/s
13:46:56 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:56 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:56 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:56 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:56 INFO    opendrift.models.basemodel: 2021-09-24 16:30:00 - step 34 of 48 - 5000 active elements (0 deactivated)
13:46:56 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:56 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:56 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:56 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:56 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:56 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:56 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:56 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:56 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:56 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 16:00:00 (before)
                2021-09-24 17:00:00 (after)
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 29x30x8) for time after (2021-09-24 17:00:00)
13:46:57 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 16:00:00) in space  (linearNDFast)
13:46:57 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:57 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 17:00:00) in space  (linearNDFast)
13:46:57 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:57 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 16:00:00, weight 0.50) and
                      after (2021-09-24 17:00:00, weight 0.50) in time
13:46:57 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:57 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42105950321455 and -65.21468752218343 degrees.
13:46:57 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42105950321455 and -65.21468752218343 degrees.
13:46:57 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:57 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:57 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:57 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:57 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:57 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:57 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:57 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:57 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:57 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:57 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:57 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.155897 (min) 0.135756 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.0674899 (min) 0.421527 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     x_wind: 10.934 (min) 11.3436 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     y_wind: -0.199997 (min) 0.246051 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.064 (min) 319.417 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.737 (min) 13.509 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0954 (min) 33.5309 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000373903 (min) 0.00123827 (max)
13:46:57 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:57 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:57 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:57 DEBUG   opendrift.models.basemodel:            60.0543815838673 <- latitude  -> 60.1759027536112
13:46:57 DEBUG   opendrift.models.basemodel:            4.578951385797842 <- longitude -> 4.785323336735435
13:46:57 DEBUG   opendrift.models.basemodel:            -50.80966014043071   <- z ->   0.0
13:46:57 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:57 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:57 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:57 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:57 INFO    opendrift.models.radionuclides: Number of transformations: 26
13:46:57 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:57 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:57 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1423.    0.   13.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:57 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:57 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11628282150363921
13:46:57 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:57 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:57 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:57 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:57 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:57 INFO    opendrift.models.radionuclides: Speciation: [3670, 1317, 13, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:57 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0017262718545421733 and 0.38876147282269546 m/s
13:46:57 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:57 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:57 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:57 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:57 INFO    opendrift.models.basemodel: 2021-09-24 17:00:00 - step 35 of 48 - 5000 active elements (0 deactivated)
13:46:57 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:57 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:57 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:57 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:57 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:57 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 17:00:00 (before)
                2021-09-24 18:00:00 (after)
13:46:57 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 17:00:00) in space  (linearNDFast)
13:46:57 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:57 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:46:57 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42146448383585 and -65.21565024245176 degrees.
13:46:58 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42146448383585 and -65.21565024245176 degrees.
13:46:58 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:58 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:58 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:58 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:58 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:58 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:58 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:58 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:58 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:58 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:58 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:58 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.190592 (min) 0.125512 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.121079 (min) 0.465702 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     x_wind: 10.8996 (min) 11.134 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     y_wind: -0.69797 (min) -0.127169 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.082 (min) 319.534 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.7219 (min) 13.5088 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.0977 (min) 33.5439 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000462809 (min) 0.00131867 (max)
13:46:58 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:58 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:58 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:58 DEBUG   opendrift.models.basemodel:            60.0574392690871 <- latitude  -> 60.18195331607207
13:46:58 DEBUG   opendrift.models.basemodel:            4.57854640167587 <- longitude -> 4.7843606296957155
13:46:58 DEBUG   opendrift.models.basemodel:            -50.369873171522386   <- z ->   0.0
13:46:58 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:58 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:58 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:58 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:58 INFO    opendrift.models.radionuclides: Number of transformations: 25
13:46:58 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:58 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0]
13:46:58 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1446.    0.   15.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:58 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:46:58 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1122090737915039
13:46:58 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:46:58 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:46:58 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:46:58 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:58 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:58 INFO    opendrift.models.radionuclides: Speciation: [3693, 1292, 15, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:46:58 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.00016948387453143694 and 0.4765517391148849 m/s
13:46:58 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:46:58 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:46:58 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:58 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:58 INFO    opendrift.models.basemodel: 2021-09-24 17:30:00 - step 36 of 48 - 5000 active elements (0 deactivated)
13:46:58 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:46:58 DEBUG   opendrift.models.basemodel: ======================================================================
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:58 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:58 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:58 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:46:58 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 17:00:00 (before)
                2021-09-24 18:00:00 (after)
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 30x31x7) for time after (2021-09-24 18:00:00)
13:46:59 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 17:00:00) in space  (linearNDFast)
13:46:59 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:59 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 18:00:00) in space  (linearNDFast)
13:46:59 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:46:59 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 17:00:00, weight 0.50) and
                      after (2021-09-24 18:00:00, weight 0.50) in time
13:46:59 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:46:59 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43026024953552 and -65.21390792359855 degrees.
13:46:59 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43026024953552 and -65.21390792359855 degrees.
13:46:59 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:59 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:59 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:46:59 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:59 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:46:59 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:46:59 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:46:59 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:46:59 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:46:59 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:46:59 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:46:59 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:46:59 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:46:59 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:46:59 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:46:59 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:46:59 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:46:59 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:46:59 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.205403 (min) 0.117232 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.197242 (min) 0.485751 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     x_wind: 10.7582 (min) 11.0031 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     y_wind: -0.978487 (min) -0.293934 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.066 (min) 319.508 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.6093 (min) 13.5008 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1016 (min) 33.5404 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000336779 (min) 0.00159645 (max)
13:46:59 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:46:59 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:59 DEBUG   opendrift.models.basemodel:            5000 active elements
13:46:59 DEBUG   opendrift.models.basemodel:            60.059802327205205 <- latitude  -> 60.19015401083361
13:46:59 DEBUG   opendrift.models.basemodel:            4.569750641555879 <- longitude -> 4.786102935520576
13:46:59 DEBUG   opendrift.models.basemodel:            -49.64283076121439   <- z ->   0.0
13:46:59 DEBUG   opendrift.models.basemodel: ---------------------------------
13:46:59 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:46:59 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:46:59 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:46:59 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:46:59 INFO    opendrift.models.radionuclides: Number of transformations: 37
13:46:59 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:46:59 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:46:59 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1483.    0.   15.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:46:59 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:46:59 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:46:59 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:46:59 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:00 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11024281259822845
13:47:00 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:00 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:00 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:00 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:00 INFO    opendrift.models.radionuclides: Speciation: [3730, 1255, 15, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:00 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.002104286492347029 and 0.42012997197393553 m/s
13:47:00 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:00 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:00 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:00 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:00 INFO    opendrift.models.basemodel: 2021-09-24 18:00:00 - step 37 of 48 - 5000 active elements (0 deactivated)
13:47:00 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:00 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:00 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:00 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 18:00:00 (before)
                2021-09-24 19:00:00 (after)
13:47:00 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 18:00:00) in space  (linearNDFast)
13:47:00 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:00 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:00 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43427497539294 and -65.21566662697816 degrees.
13:47:00 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43427497539294 and -65.21566662697816 degrees.
13:47:00 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:00 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:00 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:00 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:00 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:00 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:00 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:00 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:00 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:00 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:00 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:00 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.263981 (min) 0.124987 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.289166 (min) 0.578772 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     x_wind: 10.4982 (min) 10.971 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     y_wind: -1.34331 (min) -0.455473 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.078 (min) 319.968 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.6059 (min) 13.5079 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1005 (min) 33.5701 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000465997 (min) 0.00151624 (max)
13:47:00 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:00 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:00 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:00 DEBUG   opendrift.models.basemodel:            60.06171964254096 <- latitude  -> 60.196448151387315
13:47:00 DEBUG   opendrift.models.basemodel:            4.565735912159824 <- longitude -> 4.7843442407610235
13:47:00 DEBUG   opendrift.models.basemodel:            -49.72824947693512   <- z ->   0.0
13:47:00 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:00 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:00 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:00 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:00 INFO    opendrift.models.radionuclides: Number of transformations: 29
13:47:00 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:00 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:00 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1512.    0.   15.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:00 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:00 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11037055804681777
13:47:00 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:00 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:00 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:00 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:00 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:00 INFO    opendrift.models.radionuclides: Speciation: [3759, 1226, 15, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:00 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0016953584364121565 and 0.41841500780340707 m/s
13:47:00 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:00 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:00 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:00 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:00 INFO    opendrift.models.basemodel: 2021-09-24 18:30:00 - step 38 of 48 - 5000 active elements (0 deactivated)
13:47:00 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:00 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:00 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:00 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:00 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:00 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 18:00:00 (before)
                2021-09-24 19:00:00 (after)
13:47:01 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:01 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:01 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:01 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:01 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:01 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 31x32x7) for time after (2021-09-24 19:00:00)
13:47:01 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 18:00:00) in space  (linearNDFast)
13:47:01 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:01 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 19:00:00) in space  (linearNDFast)
13:47:01 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:01 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 18:00:00, weight 0.50) and
                      after (2021-09-24 19:00:00, weight 0.50) in time
13:47:01 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:01 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43379629942004 and -65.21389072265346 degrees.
13:47:02 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43379629942004 and -65.21389072265346 degrees.
13:47:02 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:02 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:02 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:02 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:02 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:02 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:02 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:02 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.22727 (min) 0.136103 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.353702 (min) 0.654884 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     x_wind: 10.4834 (min) 11.0185 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     y_wind: -2.29908 (min) -1.2774 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.071 (min) 319.389 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.5359 (min) 13.5036 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1025 (min) 33.5971 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000490963 (min) 0.00159759 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:02 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:02 DEBUG   opendrift.models.basemodel:            60.065782894431365 <- latitude  -> 60.20325297355454
13:47:02 DEBUG   opendrift.models.basemodel:            4.566214584852399 <- longitude -> 4.786120137637481
13:47:02 DEBUG   opendrift.models.basemodel:            -49.603373256057296   <- z ->   0.0
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:02 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:02 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:02 INFO    opendrift.models.radionuclides: Number of transformations: 23
13:47:02 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:02 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:02 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1535.    0.   15.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:02 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:02 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11436322346019744
13:47:02 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:02 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:02 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:02 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:02 INFO    opendrift.models.radionuclides: Speciation: [3782, 1203, 15, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:02 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.003091284701462367 and 0.4312930023429508 m/s
13:47:02 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:02 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:02 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:02 INFO    opendrift.models.basemodel: 2021-09-24 19:00:00 - step 39 of 48 - 5000 active elements (0 deactivated)
13:47:02 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:02 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:02 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:02 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 19:00:00 (before)
                2021-09-24 20:00:00 (after)
13:47:02 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 19:00:00) in space  (linearNDFast)
13:47:02 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:02 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:02 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44474679482607 and -65.21346148569054 degrees.
13:47:02 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44474679482607 and -65.21346148569054 degrees.
13:47:02 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:02 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:02 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:02 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:02 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:02 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:02 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:02 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:02 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.239725 (min) 0.1577 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.425683 (min) 0.708 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     x_wind: 10.4479 (min) 11.1 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     y_wind: -3.53097 (min) -2.0805 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.07 (min) 319.493 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 11.33 (min) 13.4951 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1047 (min) 33.6142 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000496389 (min) 0.00169399 (max)
13:47:02 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:02 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:02 DEBUG   opendrift.models.basemodel:            60.07599840707999 <- latitude  -> 60.21293623694391
13:47:02 DEBUG   opendrift.models.basemodel:            4.5552640909010185 <- longitude -> 4.786549378717763
13:47:02 DEBUG   opendrift.models.basemodel:            -50.51613180449653   <- z ->   0.0
13:47:02 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:02 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:02 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:02 INFO    opendrift.models.radionuclides: Number of transformations: 30
13:47:02 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:02 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:02 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1565.    0.   15.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:02 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:02 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.12230849424648284
13:47:02 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:02 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:02 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:02 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:02 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:02 INFO    opendrift.models.radionuclides: Speciation: [3812, 1173, 15, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:02 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0026494467512134046 and 0.47143954435104163 m/s
13:47:02 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:02 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:02 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:02 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:02 INFO    opendrift.models.basemodel: 2021-09-24 19:30:00 - step 40 of 48 - 5000 active elements (0 deactivated)
13:47:02 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:02 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:02 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:02 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:02 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:02 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 19:00:00 (before)
                2021-09-24 20:00:00 (after)
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:04 DEBUG   opendrift.readers.interpolation.structured: Filled NaN-values toward seafloor for :['sea_water_temperature', 'x_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity', 'y_sea_water_velocity']
13:47:04 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 32x32x8) for time after (2021-09-24 20:00:00)
13:47:04 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 19:00:00) in space  (linearNDFast)
13:47:04 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:04 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 20:00:00) in space  (linearNDFast)
13:47:04 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:04 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 19:00:00, weight 0.50) and
                      after (2021-09-24 20:00:00, weight 0.50) in time
13:47:04 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:04 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44850416630298 and -65.20773295060316 degrees.
13:47:04 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44850416630298 and -65.20773295060316 degrees.
13:47:04 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:04 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:04 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:04 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:04 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:04 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.228671 (min) 0.157591 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.435096 (min) 0.776228 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     x_wind: 10.2979 (min) 10.6599 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     y_wind: -3.83366 (min) -3.14781 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 298.079 (min) 319.72 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.9229 (min) 13.4903 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1061 (min) 33.639 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000551539 (min) 0.00129236 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:04 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:04 DEBUG   opendrift.models.basemodel:            60.0845400736916 <- latitude  -> 60.222425582453226
13:47:04 DEBUG   opendrift.models.basemodel:            4.551506720364481 <- longitude -> 4.792277906770552
13:47:04 DEBUG   opendrift.models.basemodel:            -50.87127078174268   <- z ->   0.0
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:04 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:04 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:04 INFO    opendrift.models.radionuclides: Number of transformations: 23
13:47:04 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:04 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0]
13:47:04 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1587.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:04 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:04 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11569021009397505
13:47:04 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:04 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:04 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:04 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:04 INFO    opendrift.models.radionuclides: Speciation: [3834, 1150, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:04 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0016056300459980878 and 0.4474679170754324 m/s
13:47:04 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:04 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:04 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:04 INFO    opendrift.models.basemodel: 2021-09-24 20:00:00 - step 41 of 48 - 5000 active elements (0 deactivated)
13:47:04 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:04 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:04 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:04 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 20:00:00 (before)
                2021-09-24 21:00:00 (after)
13:47:04 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 20:00:00) in space  (linearNDFast)
13:47:04 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:04 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:04 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45262655729441 and -65.21099840935807 degrees.
13:47:04 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.45262655729441 and -65.21099840935807 degrees.
13:47:04 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:04 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:04 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:04 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:04 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:04 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:04 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:04 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:04 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.175957 (min) 0.16791 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.430373 (min) 0.826807 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     x_wind: 10 (min) 10.2772 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     y_wind: -4.23627 (min) -3.84109 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 296.621 (min) 319.71 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.5917 (min) 13.4936 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1075 (min) 33.6938 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000624943 (min) 0.00128402 (max)
13:47:04 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:04 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:04 DEBUG   opendrift.models.basemodel:            60.091557960069935 <- latitude  -> 60.23510170602269
13:47:04 DEBUG   opendrift.models.basemodel:            4.54738431707212 <- longitude -> 4.7890124458820145
13:47:04 DEBUG   opendrift.models.basemodel:            -50.45916083428867   <- z ->   0.0
13:47:04 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:04 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:04 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:04 INFO    opendrift.models.radionuclides: Number of transformations: 33
13:47:04 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:04 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:04 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1620.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:04 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:04 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.11059771207094192
13:47:04 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:04 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:04 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:04 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:04 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:04 INFO    opendrift.models.radionuclides: Speciation: [3867, 1117, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:04 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0015987230019996596 and 0.4116084546305962 m/s
13:47:04 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:04 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:04 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:04 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:04 INFO    opendrift.models.basemodel: 2021-09-24 20:30:00 - step 42 of 48 - 5000 active elements (0 deactivated)
13:47:04 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:04 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:04 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:04 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:04 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:04 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 20:00:00 (before)
                2021-09-24 21:00:00 (after)
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:06 DEBUG   opendrift.readers.interpolation.structured: Filled NaN-values toward seafloor for :['sea_water_temperature', 'x_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity', 'y_sea_water_velocity']
13:47:06 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 33x33x8) for time after (2021-09-24 21:00:00)
13:47:06 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 20:00:00) in space  (linearNDFast)
13:47:06 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:06 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 21:00:00) in space  (linearNDFast)
13:47:06 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:06 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 20:00:00, weight 0.50) and
                      after (2021-09-24 21:00:00, weight 0.50) in time
13:47:06 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:06 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44642369438179 and -65.20719811875715 degrees.
13:47:06 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44642369438179 and -65.20719811875715 degrees.
13:47:06 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:06 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:06 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:06 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:06 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:06 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.143039 (min) 0.178867 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.424593 (min) 0.826386 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     x_wind: 9.69707 (min) 10.0953 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     y_wind: -4.52166 (min) -4.14322 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 293.01 (min) 320.174 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.3163 (min) 13.4803 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1081 (min) 33.7688 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.000960773 (min) 0.000917371 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:06 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:06 DEBUG   opendrift.models.basemodel:            60.10331106657354 <- latitude  -> 60.24680936400656
13:47:06 DEBUG   opendrift.models.basemodel:            4.5535871725345825 <- longitude -> 4.792812737974238
13:47:06 DEBUG   opendrift.models.basemodel:            -50.72958230715334   <- z ->   0.0
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:06 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:06 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:06 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:06 INFO    opendrift.models.radionuclides: Number of transformations: 24
13:47:06 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:06 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:06 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1644.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:06 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:06 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.1092118094587326
13:47:06 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:06 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:06 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:06 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:06 INFO    opendrift.models.radionuclides: Speciation: [3891, 1093, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:06 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0005833705508434714 and 0.4142800480229628 m/s
13:47:06 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:06 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:06 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:06 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:06 INFO    opendrift.models.basemodel: 2021-09-24 21:00:00 - step 43 of 48 - 5000 active elements (0 deactivated)
13:47:06 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:06 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:06 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:06 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 21:00:00 (before)
                2021-09-24 22:00:00 (after)
13:47:06 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 21:00:00) in space  (linearNDFast)
13:47:06 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:06 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:06 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44630732967907 and -65.20876719889304 degrees.
13:47:06 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.44630732967907 and -65.20876719889304 degrees.
13:47:06 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:06 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:06 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:06 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:06 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:06 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:06 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:06 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:06 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:06 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.103998 (min) 0.206376 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.414314 (min) 0.81449 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     x_wind: 9.29588 (min) 9.92513 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     y_wind: -4.83244 (min) -4.38692 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 290.337 (min) 320.077 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.3038 (min) 13.479 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1105 (min) 33.7764 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00111368 (min) 0.000835868 (max)
13:47:06 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:06 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:06 DEBUG   opendrift.models.basemodel:            60.11031711086596 <- latitude  -> 60.258879314341996
13:47:06 DEBUG   opendrift.models.basemodel:            4.553703538258129 <- longitude -> 4.791243646884122
13:47:06 DEBUG   opendrift.models.basemodel:            -51.26380209447758   <- z ->   0.0
13:47:06 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:06 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:06 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:06 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:06 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:06 INFO    opendrift.models.radionuclides: Number of transformations: 15
13:47:06 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:06 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:06 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1659.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:06 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:06 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.10816731761455535
13:47:06 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:06 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:06 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:06 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:06 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:07 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:07 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:07 INFO    opendrift.models.radionuclides: Speciation: [3906, 1078, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:07 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0022760200187788267 and 0.43166277161844935 m/s
13:47:07 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:07 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:07 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:07 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:07 INFO    opendrift.models.basemodel: 2021-09-24 21:30:00 - step 44 of 48 - 5000 active elements (0 deactivated)
13:47:07 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:07 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:07 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:07 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:07 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:07 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:07 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:07 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:07 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:07 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 21:00:00 (before)
                2021-09-24 22:00:00 (after)
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:08 DEBUG   opendrift.readers.interpolation.structured: Filled NaN-values toward seafloor for :['sea_water_temperature', 'x_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity', 'y_sea_water_velocity']
13:47:08 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 32x34x8) for time after (2021-09-24 22:00:00)
13:47:08 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 21:00:00) in space  (linearNDFast)
13:47:08 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:08 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 22:00:00) in space  (linearNDFast)
13:47:08 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:08 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 21:00:00, weight 0.50) and
                      after (2021-09-24 22:00:00, weight 0.50) in time
13:47:08 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:08 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.4388679508014 and -65.20789273237074 degrees.
13:47:08 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.4388679508014 and -65.20789273237074 degrees.
13:47:08 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:08 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:08 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:08 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:08 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:08 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:08 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:08 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:08 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:08 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:08 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:08 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:08 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:08 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:08 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:08 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:08 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:08 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:08 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0733622 (min) 0.254386 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.386462 (min) 0.768556 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     x_wind: 9.15849 (min) 9.65684 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     y_wind: -4.89942 (min) -4.5589 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 290.06 (min) 318.649 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.319 (min) 13.47 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.113 (min) 33.7773 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.0010771 (min) 0.00068673 (max)
13:47:08 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:08 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:08 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:08 DEBUG   opendrift.models.basemodel:            60.1185292828754 <- latitude  -> 60.27080524046504
13:47:08 DEBUG   opendrift.models.basemodel:            4.561142910356624 <- longitude -> 4.792118122750175
13:47:08 DEBUG   opendrift.models.basemodel:            -51.52001447918828   <- z ->   0.0
13:47:08 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:08 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:08 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:08 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:08 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:08 INFO    opendrift.models.radionuclides: Number of transformations: 27
13:47:08 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:08 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:08 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1686.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:08 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:08 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:08 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:08 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:09 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.10408583684921263
13:47:09 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:09 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:09 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:09 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:09 INFO    opendrift.models.radionuclides: Speciation: [3933, 1051, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:09 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0019662808953198625 and 0.49048311128250666 m/s
13:47:09 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:09 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:09 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:09 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:09 INFO    opendrift.models.basemodel: 2021-09-24 22:00:00 - step 45 of 48 - 5000 active elements (0 deactivated)
13:47:09 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:09 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:09 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:09 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 22:00:00 (before)
                2021-09-24 23:00:00 (after)
13:47:09 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 22:00:00) in space  (linearNDFast)
13:47:09 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:09 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:09 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43548950162166 and -65.20315992341463 degrees.
13:47:09 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43548950162166 and -65.20315992341463 degrees.
13:47:09 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:09 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:09 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:09 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:09 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:09 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:09 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:09 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:09 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:09 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:09 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:09 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.0449418 (min) 0.253213 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.377201 (min) 0.745914 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     x_wind: 9.00365 (min) 9.3585 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     y_wind: -5 (min) -4.7 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 284.256 (min) 318.656 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.3171 (min) 13.4611 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1138 (min) 33.779 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00126556 (min) 0.000570445 (max)
13:47:09 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:09 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:09 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:09 DEBUG   opendrift.models.basemodel:            60.12643650267053 <- latitude  -> 60.280488657575305
13:47:09 DEBUG   opendrift.models.basemodel:            4.564521358905507 <- longitude -> 4.796850926376234
13:47:09 DEBUG   opendrift.models.basemodel:            -51.83901160100325   <- z ->   0.0
13:47:09 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:09 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:09 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:09 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:09 INFO    opendrift.models.radionuclides: Number of transformations: 17
13:47:09 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:09 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:09 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    3.    0.    0.    0.]
 [1703.    0.   16.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:09 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:09 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.10030083392858505
13:47:09 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:09 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:09 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:09 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:09 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:09 INFO    opendrift.models.radionuclides: Speciation: [3950, 1034, 16, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:09 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.00126815087850578 and 0.44214656758971305 m/s
13:47:09 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:09 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:09 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:09 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:09 INFO    opendrift.models.basemodel: 2021-09-24 22:30:00 - step 46 of 48 - 5000 active elements (0 deactivated)
13:47:09 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:09 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:09 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:09 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:09 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:09 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 22:00:00 (before)
                2021-09-24 23:00:00 (after)
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:11 DEBUG   opendrift.readers.interpolation.structured: Filled NaN-values toward seafloor for :['sea_water_temperature', 'x_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity', 'y_sea_water_velocity']
13:47:11 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 33x35x8) for time after (2021-09-24 23:00:00)
13:47:11 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 22:00:00) in space  (linearNDFast)
13:47:11 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:11 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-24 23:00:00) in space  (linearNDFast)
13:47:11 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:11 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 22:00:00, weight 0.50) and
                      after (2021-09-24 23:00:00, weight 0.50) in time
13:47:11 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:11 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43018057555066 and -65.19990157994725 degrees.
13:47:11 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43018057555066 and -65.19990157994725 degrees.
13:47:11 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:11 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:11 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:11 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:11 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:11 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.106995 (min) 0.281677 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.339986 (min) 0.681123 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     x_wind: 8.85116 (min) 9.21805 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     y_wind: -5.11541 (min) -4.9256 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 277.622 (min) 317.164 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.3804 (min) 13.4621 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.116 (min) 33.7623 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00118587 (min) 0.000478166 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:11 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:11 DEBUG   opendrift.models.basemodel:            60.13177560740451 <- latitude  -> 60.29267886282861
13:47:11 DEBUG   opendrift.models.basemodel:            4.569830276238308 <- longitude -> 4.800109266940719
13:47:11 DEBUG   opendrift.models.basemodel:            -53.05390299989281   <- z ->   0.0
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:11 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:11 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:11 INFO    opendrift.models.radionuclides: Number of transformations: 19
13:47:11 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1]
13:47:11 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0]
13:47:11 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    4.    0.    0.    0.]
 [1720.    0.   17.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:11 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:11 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.09958732735490798
13:47:11 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:11 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:11 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:11 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:11 INFO    opendrift.models.radionuclides: Speciation: [3966, 1017, 17, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:11 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.001202687508043208 and 0.4272547657715558 m/s
13:47:11 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:11 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:11 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:11 INFO    opendrift.models.basemodel: 2021-09-24 23:00:00 - step 47 of 48 - 5000 active elements (0 deactivated)
13:47:11 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:11 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:11 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:11 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 23:00:00 (before)
                2021-09-25 00:00:00 (after)
13:47:11 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 23:00:00) in space  (linearNDFast)
13:47:11 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:11 DEBUG   opendrift.readers.basereader.structured: No time interpolation needed - right on time.
13:47:11 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43074131681468 and -65.19650714153583 degrees.
13:47:11 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.43074131681468 and -65.19650714153583 degrees.
13:47:11 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:11 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:11 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:11 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:11 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:11 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:11 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:11 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:11 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.101259 (min) 0.299388 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.29783 (min) 0.630521 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     x_wind: 8.69827 (min) 9.082 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     y_wind: -5.2869 (min) -5.13306 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 273.463 (min) 318.785 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.4017 (min) 13.4568 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1163 (min) 33.7616 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00123365 (min) 0.000772695 (max)
13:47:11 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:11 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:11 DEBUG   opendrift.models.basemodel:            60.13971018354551 <- latitude  -> 60.30476123139569
13:47:11 DEBUG   opendrift.models.basemodel:            4.569269508628919 <- longitude -> 4.803503696859818
13:47:11 DEBUG   opendrift.models.basemodel:            -53.35578268304514   <- z ->   0.0
13:47:11 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:11 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:11 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:11 INFO    opendrift.models.radionuclides: Number of transformations: 21
13:47:11 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:11 DEBUG   opendrift.models.radionuclides: new species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:11 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    4.    0.    0.    0.]
 [1741.    0.   17.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:11 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:11 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.09894664036560058
13:47:11 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:11 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:11 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:11 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:11 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:11 INFO    opendrift.models.radionuclides: Speciation: [3987, 996, 17, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:11 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.0007472196383326423 and 0.41579166263242845 m/s
13:47:11 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:11 DEBUG   opendrift.models.basemodel: to be seeded: 0, already seeded 5000
13:47:11 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:11 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:11 INFO    opendrift.models.basemodel: 2021-09-24 23:30:00 - step 48 of 48 - 5000 active elements (0 deactivated)
13:47:11 DEBUG   opendrift.models.basemodel: 0 elements scheduled.
13:47:11 DEBUG   opendrift.models.basemodel: ======================================================================
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:11 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:11 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:11 DEBUG   opendrift.readers.basereader.variables: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:47:11 DEBUG   opendrift.readers.basereader.structured: Reader time:
                2021-09-24 23:00:00 (before)
                2021-09-25 00:00:00 (after)
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking sea_floor_depth_below_sea_level for invalid values
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking x_wind for invalid values
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking y_wind for invalid values
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking x_sea_water_velocity for invalid values
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking y_sea_water_velocity for invalid values
13:47:13 DEBUG   opendrift.readers.interpolation.structured: Filled NaN-values toward seafloor for :['sea_water_temperature', 'x_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity', 'y_sea_water_velocity']
13:47:13 DEBUG   opendrift.readers.basereader.structured: Fetched env-block (size 33x36x8) for time after (2021-09-25 00:00:00)
13:47:13 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 23:00:00) in space  (linearNDFast)
13:47:13 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:13 DEBUG   opendrift.readers.basereader.structured: Interpolating after (2021-09-25 00:00:00) in space  (linearNDFast)
13:47:13 DEBUG   opendrift.readers.interpolation.structured: Initialising interpolator.
13:47:13 DEBUG   opendrift.readers.basereader.structured: Interpolating before (2021-09-24 23:00:00, weight 0.50) and
                      after (2021-09-25 00:00:00, weight 0.50) in time
13:47:13 DEBUG   opendrift.readers.basereader.structured: Interpolating profiles in time
13:47:13 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42731170559422 and -65.19711858668626 degrees.
13:47:13 DEBUG   opendrift.readers.basereader.variables: Rotating vectors between -65.42731170559422 and -65.19711858668626 degrees.
13:47:13 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:13 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:13 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:13 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:13 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:13 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:13 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:13 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:13 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:13 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:13 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:13 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:13 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:13 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:13 DEBUG   opendrift.models.basemodel:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
13:47:13 DEBUG   opendrift.models.basemodel:       Using fallback value 10 for sea_water_temperature for 0 profiles
13:47:13 DEBUG   opendrift.models.basemodel:       Using fallback value 34 for sea_water_salinity for 0 profiles
13:47:13 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:13 DEBUG   opendrift.models.basemodel:     x_sea_water_velocity: -0.161775 (min) 0.296056 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     y_sea_water_velocity: 0.260897 (min) 0.581962 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     x_wind: 8.30598 (min) 8.67165 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     y_wind: -5.29199 (min) -5.10178 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     sea_floor_depth_below_sea_level: 268.955 (min) 321.633 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     sea_water_temperature: 10.599 (min) 13.45 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     sea_water_salinity: 33.1196 (min) 33.7154 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     upward_sea_water_velocity: -0.00138349 (min) 0.000790568 (max)
13:47:13 DEBUG   opendrift.models.basemodel:     conc3: 0.001 (min) 0.001 (max)
13:47:13 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:13 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:13 DEBUG   opendrift.models.basemodel:            60.146040119962784 <- latitude  -> 60.31061749143504
13:47:13 DEBUG   opendrift.models.basemodel:            4.5726991181906325 <- longitude -> 4.802892258805661
13:47:13 DEBUG   opendrift.models.basemodel:            -53.70830000361641   <- z ->   0.0
13:47:13 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:13 DEBUG   opendrift.models.basemodel: No elements hit coastline.
13:47:13 DEBUG   opendrift.models.basemodel: No elements hit seafloor.
13:47:13 DEBUG   opendrift.models.basemodel: No elements to deactivate
13:47:13 DEBUG   opendrift.models.basemodel: Calling RadionuclideDrift.update()
13:47:13 INFO    opendrift.models.radionuclides: Number of transformations: 21
13:47:13 DEBUG   opendrift.models.radionuclides: old species: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1]
13:47:13 DEBUG   opendrift.models.radionuclides: new species: [0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
13:47:13 DEBUG   opendrift.models.radionuclides: Number of transformations total:
 [[   0.    4.    0.    0.    0.]
 [1761.    0.   18.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]
 [   0.    0.    0.    0.    0.]]
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for desorption from sediments: 0.5 m
13:47:13 DEBUG   opendrift.models.oceandrift: Using diffusivity from Large1994 since model diffusivities not available
13:47:13 DEBUG   opendrift.models.oceandrift: Diffusivities are in range 0.0 to 0.09237669662332534
13:47:13 DEBUG   opendrift.models.oceandrift: TSprofiles deactivated for vertical mixing
13:47:13 DEBUG   opendrift.models.oceandrift: Vertical mixing module:environment
13:47:13 DEBUG   opendrift.models.oceandrift: Turbulent diffusion with random walk scheme using 3 fast time steps of dt=600.0s
13:47:13 INFO    opendrift.models.radionuclides: Number of resuspended particles: 0
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for resuspension from sediments: 0.1 m
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for particle diameter: 1e-07 m
13:47:13 DEBUG   opendrift.models.radionuclides: Adding uncertainty for slowly rev particle diameter: 1e-07 m
13:47:14 INFO    opendrift.models.radionuclides: Speciation: [4007, 975, 18, 0, 0] ['LMM', 'Particle reversible', 'Particle slowly reversible', 'Sediment reversible', 'Sediment slowly reversible']
13:47:14 DEBUG   opendrift.models.basemodel: Moving elements according to horizontal diffusivity of 10.0, with speeds between 0.00017894904105922047 and 0.49396479049604464 m/s
13:47:14 DEBUG   opendrift.models.basemodel: 5000 active elements (0 deactivated)
13:47:14 DEBUG   opendrift.models.basemodel: Cleaning up
13:47:14 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:14 DEBUG   opendrift.models.basemodel: Variable group ['land_binary_mask']
13:47:14 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:14 DEBUG   opendrift.models.basemodel: Calling reader global_landmask
13:47:14 DEBUG   opendrift.models.basemodel: ----------------------------------------
13:47:14 DEBUG   opendrift.models.basemodel: Data needed for 5000 elements
13:47:14 DEBUG   opendrift.readers.basereader.variables: Fetching variables from global_landmask
13:47:14 DEBUG   opendrift.readers.basereader.continuous: Fetched env-before
13:47:14 DEBUG   opendrift.readers.basereader.variables: Checking land_binary_mask for invalid values
13:47:14 DEBUG   opendrift.readers.basereader.variables: Reader projection is latlon - rotation of vectors is not needed.
13:47:14 DEBUG   opendrift.models.basemodel: Obtained data for all elements.
13:47:14 DEBUG   opendrift.models.basemodel: ---------------------------------------
13:47:14 DEBUG   opendrift.models.basemodel: Finished processing all variable groups
13:47:14 DEBUG   opendrift.models.basemodel: ------------ SUMMARY -------------
13:47:14 DEBUG   opendrift.models.basemodel:     land_binary_mask: 0 (min) 0 (max)
13:47:14 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:14 DEBUG   opendrift.models.basemodel:            5000 active elements
13:47:14 DEBUG   opendrift.models.basemodel:            60.15023945895421 <- latitude  -> 60.31656481716517
13:47:14 DEBUG   opendrift.models.basemodel:            4.5702542381727085 <- longitude -> 4.8084016753333
13:47:14 DEBUG   opendrift.models.basemodel:            -54.320588453839314   <- z ->   0.0
13:47:14 DEBUG   opendrift.models.basemodel: ---------------------------------
13:47:14 DEBUG   opendrift.models.basemodel: No elements hit coastline.

Print and plot results

print(o)
print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int(item)) for item in o.ntransformations[isp,:]]) )

o.animation(color='specie',
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            legend=[o.specie_num2name(i) for i in range(o.nspecies)],
            fast = True
            )

Out:

===========================
--------------------
Reader performance:
--------------------
https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
 0:00:48.7  total
 0:00:00.0  preparing
 0:00:46.2  reading
 0:00:01.4  interpolation
 0:00:00.0  interpolation_time
 0:00:00.0  masking
 0:00:02.4  rotating vectors
--------------------
global_landmask
 0:00:00.0  total
 0:00:00.0  preparing
 0:00:00.0  reading
 0:00:00.0  masking
--------------------
Performance:
 1:04.9 total time
    3.2 configuration
    3.2 preparing main loop
      3.1 making dynamical landmask
      0.0 moving elements to ocean
     49.3 readers
        0.0 global_landmask
        0.2 postprocessing
   58.4 main loop
       48.8 https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
      8.2 updating elements
        1.2 vertical mixing
    0.0 cleaning up
--------------------
===========================
Model:  RadionuclideDrift     (OpenDrift version 1.7.1)
        5000 active Radionuclide particles  (0 deactivated, 0 scheduled)
-------------------
Environment variables:
  -----
  sea_floor_depth_below_sea_level
  sea_water_salinity
  sea_water_temperature
  upward_sea_water_velocity
  x_sea_water_velocity
  x_wind
  y_sea_water_velocity
  y_wind
     1) https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
  -----
  land_binary_mask
     1) global_landmask
  -----
Readers not added for the following variables:
  conc3
  ocean_vertical_diffusivity

Time:
        Start: 2021-09-24 00:00:00
        Present: 2021-09-25 00:00:00
        Calculation steps: 48 * 0:30:00 - total time: 1 day, 0:00:00
        Output steps: 25 * 1:00:00
===========================

Final speciation:
LMM                             :   4007
Particle reversible             :    975
Particle slowly reversible      :     18
Sediment reversible             :      0
Sediment slowly reversible      :      0
Number of transformations:
/root/project/examples/example_radionuclides.py:114: DeprecationWarning: `np.int` is a deprecated alias for the builtin `int`. To silence this warning, use `int` by itself. Doing this will not modify any behavior and is safe. When replacing `np.int`, you may wish to use e.g. `np.int64` or `np.int32` to specify the precision. If you wish to review your current use, check the release note link for additional information.
Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
  print('{}'.format(['{:>9}'.format(np.int(item)) for item in o.ntransformations[isp,:]]) )
['        0', '        4', '        0', '        0', '        0']
['     1761', '        0', '       18', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
13:47:14 WARNING opendrift.models.basemodel: Plotting fast. This will make your plots less accurate.
13:47:14 DEBUG   opendrift_landmask_data.mask: mask already memmapped
13:47:15 INFO    opendrift.models.basemodel: Saving animation to /root/project/docs/source/gallery/animations/example_radionuclides_0.gif...
13:47:15 INFO    opendrift.models.basemodel: Making animated gif...
MovieWriter imagemagick unavailable; using Pillow instead.
13:47:23 DEBUG   opendrift.models.basemodel: Time to make animation: 0:00:09.088837
../_images/example_radionuclides_0.gif
#o.plot_vertical_distribution()
#o.plot_property('specie')
o.animation_profile(color='specie',
            vmin=0,vmax=o.nspecies-1,
            legend=[o.specie_num2name(i) for i in range(o.nspecies)],
            legend_loc =3,
#            markersize=10
            )

Out:

13:47:23 INFO    opendrift.models.basemodel: Saving animation to /root/project/docs/source/gallery/animations/example_radionuclides_1.gif...
13:47:23 INFO    opendrift.models.basemodel: Making animated gif...
MovieWriter imagemagick unavailable; using Pillow instead.
../_images/example_radionuclides_1.gif
o.plot(linecolor='specie',vmin=0,vmax=o.nspecies-1,fast=True,)



# Postprocessing: write to concentration netcdf file
o.conc_lat   = reader_norkyst.lat
o.conc_lon   = reader_norkyst.lon
o.conc_topo  = reader_norkyst.get_variables('sea_floor_depth_below_sea_level',
                                       x=[reader_norkyst.xmin,reader_norkyst.xmax],
                                       y=[reader_norkyst.ymin,reader_norkyst.ymax])['sea_floor_depth_below_sea_level'][:]
#o.conc_mask  = reader_norkyst.land_binary_mask
OpenDrift - RadionuclideDrift 2021-09-24 00:00 to 2021-09-25 00:00 UTC (25 steps)

Out:

13:47:25 WARNING opendrift.models.basemodel: Plotting fast. This will make your plots less accurate.
13:47:25 DEBUG   opendrift_landmask_data.mask: mask already memmapped
# Postprocessing: write to concentration netcdf file
# o.conc_lat   = reader_norkyst.lat
# o.conc_lon   = reader_norkyst.lon
# o.conc_topo  = reader_norkyst.get_variables('sea_floor_depth_below_sea_level',
#                                        x=[reader_norkyst.xmin,reader_norkyst.xmax],
#                                        y=[reader_norkyst.ymin,reader_norkyst.ymax], block=True)['sea_floor_depth_below_sea_level'][:]
#o.conc_mask  = reader_norkyst.land_binary_mask

# o.write_netcdf_radionuclide_density_map('radio_conc.nc', pixelsize_m=200.,
#                                         zlevels=[-2.],
#                                         activity_unit='Bq',
#                                         horizontal_smoothing=True,
#                                         smoothing_cells=1,
#                                        time_avg_conc=True,
#                                        deltat=2., # hours
#                                        llcrnrlon=8.9681, llcrnrlat=58.6627,
#                                        urcrnrlon=9.2772, urcrnrlat=58.7219,
#                                        )

Total running time of the script: ( 2 minutes 10.297 seconds)

Gallery generated by Sphinx-Gallery