Drift at different depths

from datetime import datetime, timedelta
import numpy as np
from opendrift.models.oceandrift import OceanDrift

o = OceanDrift(loglevel=20)  # Set loglevel to 0 for debug information
15:18:53 INFO    opendrift:568: OpenDriftSimulation initialised (version 1.14.3 / v1.14.3-4-ga7b402c)

Using live data from Thredds

o.add_readers_from_list([
    'https://thredds.met.no/thredds/dodsC/fou-hi/norkystv3_800m_m00_be'])

Adding some diffusion

o.set_config('drift:horizontal_diffusivity', 10)  # m2/s

Seed 1000 elements at random depths

z = -np.random.rand(2000)*50
o.seed_elements(lon=4.8, lat=60.0, z=z, radius=0, number=2000,
                time=datetime.now())

print(o)
15:18:53 INFO    opendrift.models.basemodel.environment:206: Adding a global landmask from GSHHG
15:18:58 INFO    opendrift.models.basemodel.environment:229: Fallback values will be used for the following variables which have no readers:
15:18:58 INFO    opendrift.models.basemodel.environment:232:    x_sea_water_velocity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    y_sea_water_velocity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    sea_surface_height: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    x_wind: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    y_wind: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    upward_sea_water_velocity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    ocean_vertical_diffusivity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    sea_surface_wave_significant_height: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    sea_surface_wave_stokes_drift_x_velocity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    sea_surface_wave_stokes_drift_y_velocity: 0.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    ocean_mixed_layer_thickness: 50.000000
15:18:58 INFO    opendrift.models.basemodel.environment:232:    sea_floor_depth_below_sea_level: 10000.000000
===========================
Model:  OceanDrift     (OpenDrift version 1.14.3)
        0 active Lagrangian3DArray particles  (0 deactivated, 2000 scheduled)
-------------------
Environment variables:
  -----
  land_binary_mask
     1) global_landmask
  -----
Readers not added for the following variables:
  ocean_mixed_layer_thickness
  ocean_vertical_diffusivity
  sea_floor_depth_below_sea_level
  sea_surface_height
  sea_surface_wave_significant_height
  sea_surface_wave_stokes_drift_x_velocity
  sea_surface_wave_stokes_drift_y_velocity
  upward_sea_water_velocity
  x_sea_water_velocity
  x_wind
  y_sea_water_velocity
  y_wind
---
Lazy readers:
  LazyReader: https://thredds.met.no/thredds/dodsC/fou-hi/norkystv3_800m_m00_be

Discarded readers:
===========================

Running model

o.run(duration=timedelta(hours=24), time_step=1800)
15:18:58 INFO    opendrift:1778: Skipping environment variable ocean_vertical_diffusivity because of condition ['drift:vertical_mixing', 'is', False]
15:18:58 INFO    opendrift:1778: Skipping environment variable ocean_mixed_layer_thickness because of condition ['drift:vertical_mixing', 'is', False]
15:18:58 INFO    opendrift:1789: Storing previous values of element property lon because of condition (('general:coastline_action', 'in', ['stranding', 'previous']), 'or', ('general:seafloor_action', 'in', ['previous']))
15:18:58 INFO    opendrift:1789: Storing previous values of element property lat because of condition (('general:coastline_action', 'in', ['stranding', 'previous']), 'or', ('general:seafloor_action', 'in', ['previous']))
15:18:58 INFO    opendrift:1797: Storing previous values of environment variable sea_surface_height because of condition ['drift:vertical_advection', 'is', True]
15:18:58 INFO    opendrift:944: Using existing reader for land_binary_mask to move elements to ocean
15:18:58 INFO    opendrift:974: All points are in ocean
15:18:58 INFO    opendrift:2085: 2025-09-12 15:18:53.053154 - step 1 of 48 - 2000 active elements (0 deactivated)
15:18:58 INFO    opendrift.readers:61: Opening file with xr.open_dataset
15:19:01 INFO    opendrift.readers.reader_netCDF_CF_generic:332: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
15:19:01 INFO    opendrift.readers.basereader:176: Variable x_sea_water_velocity will be rotated from eastward_sea_water_velocity
15:19:01 INFO    opendrift.readers.basereader:176: Variable y_sea_water_velocity will be rotated from northward_sea_water_velocity
15:19:01 INFO    opendrift.readers.basereader:176: Variable x_wind will be rotated from eastward_wind
15:19:01 INFO    opendrift.readers.basereader:176: Variable y_wind will be rotated from northward_wind
15:19:04 INFO    opendrift:2085: 2025-09-12 15:48:53.053154 - step 2 of 48 - 2000 active elements (0 deactivated)
15:19:04 INFO    opendrift:2085: 2025-09-12 16:18:53.053154 - step 3 of 48 - 2000 active elements (0 deactivated)
15:19:06 INFO    opendrift:2085: 2025-09-12 16:48:53.053154 - step 4 of 48 - 2000 active elements (0 deactivated)
15:19:06 INFO    opendrift:2085: 2025-09-12 17:18:53.053154 - step 5 of 48 - 2000 active elements (0 deactivated)
15:19:08 INFO    opendrift:2085: 2025-09-12 17:48:53.053154 - step 6 of 48 - 2000 active elements (0 deactivated)
15:19:08 INFO    opendrift:2085: 2025-09-12 18:18:53.053154 - step 7 of 48 - 2000 active elements (0 deactivated)
15:19:10 INFO    opendrift:2085: 2025-09-12 18:48:53.053154 - step 8 of 48 - 2000 active elements (0 deactivated)
15:19:10 INFO    opendrift:2085: 2025-09-12 19:18:53.053154 - step 9 of 48 - 2000 active elements (0 deactivated)
15:19:12 INFO    opendrift:2085: 2025-09-12 19:48:53.053154 - step 10 of 48 - 2000 active elements (0 deactivated)
15:19:12 INFO    opendrift:2085: 2025-09-12 20:18:53.053154 - step 11 of 48 - 2000 active elements (0 deactivated)
15:19:14 INFO    opendrift:2085: 2025-09-12 20:48:53.053154 - step 12 of 48 - 2000 active elements (0 deactivated)
15:19:14 INFO    opendrift:2085: 2025-09-12 21:18:53.053154 - step 13 of 48 - 2000 active elements (0 deactivated)
15:19:17 INFO    opendrift:2085: 2025-09-12 21:48:53.053154 - step 14 of 48 - 2000 active elements (0 deactivated)
15:19:17 INFO    opendrift:2085: 2025-09-12 22:18:53.053154 - step 15 of 48 - 2000 active elements (0 deactivated)
15:19:20 INFO    opendrift:2085: 2025-09-12 22:48:53.053154 - step 16 of 48 - 2000 active elements (0 deactivated)
15:19:20 INFO    opendrift:2085: 2025-09-12 23:18:53.053154 - step 17 of 48 - 2000 active elements (0 deactivated)
15:19:21 INFO    opendrift:2085: 2025-09-12 23:48:53.053154 - step 18 of 48 - 2000 active elements (0 deactivated)
15:19:21 INFO    opendrift:2085: 2025-09-13 00:18:53.053154 - step 19 of 48 - 2000 active elements (0 deactivated)
15:19:23 INFO    opendrift:2085: 2025-09-13 00:48:53.053154 - step 20 of 48 - 2000 active elements (0 deactivated)
15:19:23 INFO    opendrift:2085: 2025-09-13 01:18:53.053154 - step 21 of 48 - 2000 active elements (0 deactivated)
15:19:24 INFO    opendrift:2085: 2025-09-13 01:48:53.053154 - step 22 of 48 - 2000 active elements (0 deactivated)
15:19:24 INFO    opendrift:2085: 2025-09-13 02:18:53.053154 - step 23 of 48 - 2000 active elements (0 deactivated)
15:19:25 INFO    opendrift:2085: 2025-09-13 02:48:53.053154 - step 24 of 48 - 2000 active elements (0 deactivated)
15:19:25 INFO    opendrift:2085: 2025-09-13 03:18:53.053154 - step 25 of 48 - 2000 active elements (0 deactivated)
15:19:27 INFO    opendrift:2085: 2025-09-13 03:48:53.053154 - step 26 of 48 - 2000 active elements (0 deactivated)
15:19:27 INFO    opendrift:2085: 2025-09-13 04:18:53.053154 - step 27 of 48 - 2000 active elements (0 deactivated)
15:19:28 INFO    opendrift:2085: 2025-09-13 04:48:53.053154 - step 28 of 48 - 2000 active elements (0 deactivated)
15:19:28 INFO    opendrift:2085: 2025-09-13 05:18:53.053154 - step 29 of 48 - 2000 active elements (0 deactivated)
15:19:29 INFO    opendrift:2085: 2025-09-13 05:48:53.053154 - step 30 of 48 - 2000 active elements (0 deactivated)
15:19:29 INFO    opendrift:2085: 2025-09-13 06:18:53.053154 - step 31 of 48 - 2000 active elements (0 deactivated)
15:19:31 INFO    opendrift:2085: 2025-09-13 06:48:53.053154 - step 32 of 48 - 2000 active elements (0 deactivated)
15:19:31 INFO    opendrift:2085: 2025-09-13 07:18:53.053154 - step 33 of 48 - 2000 active elements (0 deactivated)
15:19:33 INFO    opendrift:2085: 2025-09-13 07:48:53.053154 - step 34 of 48 - 2000 active elements (0 deactivated)
15:19:33 INFO    opendrift:2085: 2025-09-13 08:18:53.053154 - step 35 of 48 - 2000 active elements (0 deactivated)
15:19:34 INFO    opendrift:2085: 2025-09-13 08:48:53.053154 - step 36 of 48 - 2000 active elements (0 deactivated)
15:19:34 INFO    opendrift:2085: 2025-09-13 09:18:53.053154 - step 37 of 48 - 2000 active elements (0 deactivated)
15:19:35 INFO    opendrift:2085: 2025-09-13 09:48:53.053154 - step 38 of 48 - 2000 active elements (0 deactivated)
15:19:36 INFO    opendrift:2085: 2025-09-13 10:18:53.053154 - step 39 of 48 - 2000 active elements (0 deactivated)
15:19:37 INFO    opendrift:2085: 2025-09-13 10:48:53.053154 - step 40 of 48 - 2000 active elements (0 deactivated)
15:19:37 INFO    opendrift:2085: 2025-09-13 11:18:53.053154 - step 41 of 48 - 2000 active elements (0 deactivated)
15:19:39 INFO    opendrift:2085: 2025-09-13 11:48:53.053154 - step 42 of 48 - 2000 active elements (0 deactivated)
15:19:39 INFO    opendrift:2085: 2025-09-13 12:18:53.053154 - step 43 of 48 - 2000 active elements (0 deactivated)
15:19:40 INFO    opendrift:2085: 2025-09-13 12:48:53.053154 - step 44 of 48 - 2000 active elements (0 deactivated)
15:19:40 INFO    opendrift:2085: 2025-09-13 13:18:53.053154 - step 45 of 48 - 2000 active elements (0 deactivated)
15:19:41 INFO    opendrift:2085: 2025-09-13 13:48:53.053154 - step 46 of 48 - 2000 active elements (0 deactivated)
15:19:41 INFO    opendrift:2085: 2025-09-13 14:18:53.053154 - step 47 of 48 - 2000 active elements (0 deactivated)
15:19:43 INFO    opendrift:2085: 2025-09-13 14:48:53.053154 - step 48 of 48 - 2000 active elements (0 deactivated)
<xarray.Dataset> Size: 8MB
Dimensions:                                   (trajectory: 2000, time: 49)
Coordinates:
  * trajectory                                (trajectory) int64 16kB 0 ... 1999
  * time                                      (time) datetime64[ns] 392B 2025...
Data variables: (12/21)
    status                                    (trajectory, time) float32 392kB ...
    moving                                    (trajectory, time) float32 392kB ...
    age_seconds                               (trajectory, time) float32 392kB ...
    origin_marker                             (trajectory, time) float32 392kB ...
    lon                                       (trajectory, time) float32 392kB ...
    lat                                       (trajectory, time) float32 392kB ...
    ...                                        ...
    upward_sea_water_velocity                 (trajectory, time) float32 392kB ...
    sea_surface_wave_significant_height       (trajectory, time) float32 392kB ...
    sea_surface_wave_stokes_drift_x_velocity  (trajectory, time) float32 392kB ...
    sea_surface_wave_stokes_drift_y_velocity  (trajectory, time) float32 392kB ...
    sea_floor_depth_below_sea_level           (trajectory, time) float32 392kB ...
    land_binary_mask                          (trajectory, time) float32 392kB ...
Attributes: (12/119)
    Conventions:                                                           CF...
    standard_name_vocabulary:                                              CF...
    featureType:                                                           tr...
    title:                                                                 Op...
    summary:                                                               Ou...
    keywords:                                                              tr...
    ...                                                                    ...
    geospatial_lon_units:                                                  de...
    geospatial_lon_resolution:                                             point
    runtime:                                                               0:...
    geospatial_vertical_min:                                               -5...
    geospatial_vertical_max:                                               0.0
    geospatial_vertical_positive:                                          up


Plot results with lines and particles colored by depth

print(o)
o.plot(linecolor='z', buffer=.1, show_elements=False)
o.animation(color='z', buffer=.1)
OpenDrift - OceanDrift 2025-09-12 15:18 to 2025-09-13 15:18 UTC (49 steps)
===========================
--------------------
Reader performance:
--------------------
global_landmask
 0:00:01.5  total
 0:00:00.0  preparing
 0:00:01.5  reading
 0:00:00.0  masking
--------------------
https://thredds.met.no/thredds/dodsC/fou-hi/norkystv3_800m_m00_be
 0:00:40.1  total
 0:00:00.0  preparing
 0:00:39.7  reading
 0:00:00.8  interpolation
 0:00:00.0  interpolation_time
 0:00:00.4  rotating vectors
 0:00:00.0  masking
--------------------
Performance:
   51.6 total time
    5.2 configuration
    0.0 preparing main loop
      0.0 moving elements to ocean
   44.7 main loop
      0.1 updating elements
    1.5 cleaning up
--------------------
===========================
Model:  OceanDrift     (OpenDrift version 1.14.3)
        2000 active Lagrangian3DArray particles  (0 deactivated, 0 scheduled)
-------------------
Environment variables:
  -----
  land_binary_mask
     1) global_landmask
  -----
  sea_floor_depth_below_sea_level
  sea_surface_height
  upward_sea_water_velocity
  x_sea_water_velocity
  x_wind
  y_sea_water_velocity
  y_wind
     1) https://thredds.met.no/thredds/dodsC/fou-hi/norkystv3_800m_m00_be
  -----
Readers not added for the following variables:
  sea_surface_wave_significant_height
  sea_surface_wave_stokes_drift_x_velocity
  sea_surface_wave_stokes_drift_y_velocity

Discarded readers:

Time:
        Start: 2025-09-12 15:18:53.053154 UTC
        Present: 2025-09-13 15:18:53.053154 UTC
        Calculation steps: 48 * 0:30:00 - total time: 1 day, 0:00:00
        Output steps: 49 * 0:30:00
===========================

15:20:45 INFO    opendrift:4612: Saving animation to /root/project/docs/source/gallery/animations/example_depth_0.gif...
15:21:19 INFO    opendrift:3053: Time to make animation: 0:00:35.599888
../_images/example_depth_0.gif

Total running time of the script: (2 minutes 35.695 seconds)

Gallery generated by Sphinx-Gallery