ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

10:44:48 DEBUG   opendrift.config:168: Adding 18 config items from __init__
10:44:48 DEBUG   opendrift.config:178:   Overwriting config item readers:max_number_of_fails
10:44:48 DEBUG   opendrift.config:168: Adding 13 config items from __init__
10:44:48 INFO    opendrift:509: OpenDriftSimulation initialised (version 1.13.1 / v1.13.1-25-g5021161)
10:44:48 DEBUG   opendrift.config:168: Adding 15 config items from oceandrift
10:44:48 DEBUG   opendrift.config:178:   Overwriting config item seed:z
10:44:48 DEBUG   opendrift.config:168: Adding 71 config items from chemicaldrift
10:44:48 INFO    opendrift.readers:61: Opening file with xr.open_dataset
10:44:51 DEBUG   opendrift.readers.reader_netCDF_CF_generic:128: Finding coordinate variables.
10:44:51 DEBUG   opendrift.readers.reader_netCDF_CF_generic:143: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
10:44:52 INFO    opendrift.readers.reader_netCDF_CF_generic:332: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
10:44:52 DEBUG   opendrift.readers.reader_netCDF_CF_generic:368: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
10:44:52 DEBUG   opendrift.readers.basereader.variables:612: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
10:44:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
10:44:52 DEBUG   opendrift.readers.basereader.variables:567: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
10:44:52 DEBUG   opendrift.readers.basereader.variables:567: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
10:44:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
10:44:52 DEBUG   opendrift.models.basemodel.environment:312: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
10:44:52 DEBUG   opendrift.models.basemodel.environment:312: Added reader constant_reader
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:sea_surface_height [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_surface_height [0] float min: None, max: None [None] Fallback value for s...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: -20, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: -20, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:max_speed                     [2.0] float min: 0, max: inf [seconds] Typical maximum spee...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
general:simulation_name             [] str   min length 0, max length 64 Name of simulation...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:coastline_approximation_precision [0.001] float min: 0.0001, max: 0.005 [degrees] The precision of the...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:profiles_depth                [50] float min: 0, max: None [meters] Environment profiles...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

44:52 DEBUG   opendrift.models.chemicaldrift:891: Partitioning coefficients (Tref,freshwater)
44:52 DEBUG   opendrift.models.chemicaldrift:892: KOC_sed: 12953.922406542462 L/KgOC
44:52 DEBUG   opendrift.models.chemicaldrift:893: KOC_SPM: 12953.922406542462 L/KgOC
44:52 DEBUG   opendrift.models.chemicaldrift:894: KOC_DOM: 3004.29439651874 L/KgOC
44:52 DEBUG   opendrift.models.chemicaldrift:906: Kd_sed: 647.6961203271231 L/Kg
44:52 DEBUG   opendrift.models.chemicaldrift:907: Kd_SPM: 647.6961203271231 L/Kg
44:52 DEBUG   opendrift.models.chemicaldrift:908: Kd_DOM: 1580.2588525688573 L/Kg
44:52 DEBUG   opendrift.models.chemicaldrift:1125: nspecies: 5
44:52 DEBUG   opendrift.models.chemicaldrift:1126: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
44:52 DEBUG   opendrift.models.chemicaldrift:530: Initial partitioning:
44:52 DEBUG   opendrift.models.chemicaldrift:532:       449   0 LMM
44:52 DEBUG   opendrift.models.chemicaldrift:532:         0   1 Humic colloid
44:52 DEBUG   opendrift.models.chemicaldrift:532:        51   2 Particle reversible
44:52 DEBUG   opendrift.models.chemicaldrift:532:         0   3 Sediment reversible
44:52 DEBUG   opendrift.models.chemicaldrift:532:         0   4 Sediment slowly reversible
44:52 INFO    opendrift.models.basemodel.environment:206: Adding a global landmask from GSHHG
44:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
44:56 DEBUG   opendrift.models.basemodel.environment:312: Added reader global_landmask
44:56 INFO    opendrift.models.basemodel.environment:229: Fallback values will be used for the following variables which have no readers:
44:56 INFO    opendrift.models.basemodel.environment:232:    ocean_vertical_diffusivity: 0.000100
44:56 INFO    opendrift.models.basemodel.environment:232:    spm: 1.000000
44:56 INFO    opendrift.models.basemodel.environment:232:    active_sediment_layer_thickness: 0.030000
44:56 INFO    opendrift.models.basemodel.environment:232:    doc: 0.000000
44:56 INFO    opendrift.models.basemodel.environment:232:    sea_water_ph_reported_on_total_scale: 8.100000
44:56 INFO    opendrift.models.basemodel.environment:232:    pH_sediment: 6.900000
44:56 DEBUG   opendrift:100: Changed mode from Mode.Config to Mode.Ready

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

44:56 DEBUG   opendrift:100: Changed mode from Mode.Ready to Mode.Run
44:56 DEBUG   opendrift:1767:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.13.1
  Platform: Linux, 6.8.0-1024-aws
0 GB memory
processors (x86_64)
  NumPy version 1.26.4
  SciPy version 1.15.2
  Matplotlib version 3.9.1
  NetCDF4 version 1.6.1
  Xarray version 2025.3.1
  ADIOS (adios_db) version 1.2.5
  Copernicusmarine version 2.0.1
  Python version 3.11.6 | packaged by conda-forge | (main, Oct  3 2023, 10:40:35) [GCC 12.3.0]
------------------------------------------------------

44:56 DEBUG   opendrift:1781: No output file is specified, neglecting export_buffer_length
44:56 DEBUG   opendrift:1899: Finalizing environment and preparing readers for simulation coverage ([4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]) and time (2025-04-12 10:44:52.046155 to 2025-04-14 10:44:52.046155)
44:56 DEBUG   opendrift.models.basemodel.environment:168:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
44:56 DEBUG   opendrift.readers.basereader.structured:153: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
44:56 DEBUG   opendrift.readers.basereader.variables:612: Setting buffer size 11 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 2 m/s and time span of 1:00:00
44:56 DEBUG   opendrift.readers.basereader.variables:553: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
44:56 DEBUG   opendrift.models.basemodel.environment:168:    Preparing constant_reader for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
44:56 DEBUG   opendrift.readers.basereader.variables:553: Nothing more to prepare for constant_reader
44:56 DEBUG   opendrift.models.basemodel.environment:168:    Preparing global_landmask for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
44:56 DEBUG   opendrift.readers.basereader.variables:553: Nothing more to prepare for global_landmask
44:56 DEBUG   opendrift:1986: Initial self.result, size Frozen({'trajectory': 500, 'time': 97})
44:56 INFO    opendrift:923: Using existing reader for land_binary_mask
44:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
44:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
44:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
44:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
44:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
44:56 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
44:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
44:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
44:56 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
44:56 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
44:56 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
44:56 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
44:56 INFO    opendrift:934: All points are in ocean
44:56 INFO    opendrift.models.chemicaldrift:352: Number of species: 5
44:56 INFO    opendrift.models.chemicaldrift:354:   0 LMM
44:56 INFO    opendrift.models.chemicaldrift:354:   1 Humic colloid
44:56 INFO    opendrift.models.chemicaldrift:354:   2 Particle reversible
44:56 INFO    opendrift.models.chemicaldrift:354:   3 Sediment reversible
44:56 INFO    opendrift.models.chemicaldrift:354:   4 Sediment slowly reversible
44:56 INFO    opendrift.models.chemicaldrift:357: transfer setup: organics
44:56 INFO    opendrift.models.chemicaldrift:359: nspecies: 5
44:56 INFO    opendrift.models.chemicaldrift:360: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
44:56 DEBUG   opendrift:878: to be seeded: 500, already seeded 0
44:56 DEBUG   opendrift:896: Released 500 new elements.
44:56 WARNING opendrift:717: Seafloor check not being run because environment is missing. This will happen the first time the function is run but if it happens subsequently there is probably a problem.
44:56 DEBUG   opendrift:2059: ======================================================================
44:56 INFO    opendrift:2060: 2025-04-12 10:44:52.046155 - step 1 of 96 - 500 active elements (0 deactivated)
44:56 DEBUG   opendrift:2066: 0 elements scheduled.
44:56 DEBUG   opendrift:2068: ======================================================================
44:56 DEBUG   opendrift:2079:                57.546223 <- latitude  -> 57.64813
44:56 DEBUG   opendrift:2084:                10.507113 <- longitude -> 10.70608
44:56 DEBUG   opendrift:2089:                -9.98847   <- z ->   -0.046954762
44:56 DEBUG   opendrift:2090: ---------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
44:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
44:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
44:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
44:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
44:56 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 10:00:00 (before)
                2025-04-12 11:00:00 (after)
44:58 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
44:58 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
44:58 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
44:58 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
44:58 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
44:58 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
44:58 DEBUG   opendrift.readers.basereader.structured:292: Fetched env-block (size 37x35x7) for time before (2025-04-12 10:00:00)
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:00 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:00 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 37x35x7) for time after (2025-04-12 11:00:00)
45:00 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 10:00:00) in space  (linearNDFast)
45:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:00 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 11:00:00) in space  (linearNDFast)
45:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:00 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 10:00:00, weight 0.25) and
                      after (2025-04-12 11:00:00, weight 0.75) in time
45:00 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:00 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.4929004930107 and -59.29392585004879 degrees.
45:00 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.4929004930107 and -59.29392585004879 degrees.
45:00 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:00 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:00 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:00 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:00 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:00 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:00 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:00 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:00 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:00 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:00 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:00 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:00 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:00 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:00 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:00 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:00 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:00 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:00 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:00 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:00 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:00 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.150946 (min) 0.368892 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.054012 (min) 0.434054 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.50833 (min) -0.474948 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.13614 (min) 7.22152 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.4517 (min) -1.0897 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3939 (min) 8.09552 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.6867 (min) 32.0579 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -1.84899e-05 (min) 0.000129339 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:00 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:01 DEBUG   opendrift:698: No elements hit coastline.
45:01 DEBUG   opendrift:737: No elements hit seafloor.
45:01 DEBUG   opendrift:1699: No elements to deactivate
45:01 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:01 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
45:01 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:01 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
45:01 DEBUG   opendrift.models.chemicaldrift:1473: old species: [2]
45:01 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0]
45:01 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
45:01 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:01 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:01 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:01 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:01 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03880462183498325
45:01 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:01 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:01 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:01 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 24 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 24 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 34 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:01 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:01 DEBUG   opendrift.models.oceandrift:516: 31 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:01 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:01 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:01 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:01 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:01 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:01 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:01 INFO    opendrift.models.chemicaldrift:1882: partitioning: [450, 0, 48, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:01 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:01 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:01 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:01 DEBUG   opendrift:737: No elements hit seafloor.
45:01 DEBUG   opendrift:2059: ======================================================================
45:01 INFO    opendrift:2060: 2025-04-12 11:14:52.046155 - step 2 of 96 - 500 active elements (0 deactivated)
45:01 DEBUG   opendrift:2066: 0 elements scheduled.
45:01 DEBUG   opendrift:2068: ======================================================================
45:01 DEBUG   opendrift:2079:                57.549288727981 <- latitude  -> 57.651666482485744
45:01 DEBUG   opendrift:2084:                10.508021769544973 <- longitude -> 10.709902523374568
45:01 DEBUG   opendrift:2089:                -19.943312556713135   <- z ->   -0.04003589136625818
45:01 DEBUG   opendrift:2090: ---------------------------------
45:01 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:01 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:01 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:01 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:01 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:01 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:01 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:01 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 11:00:00 (before)
                2025-04-12 12:00:00 (after)
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:03 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:03 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 38x35x7) for time after (2025-04-12 12:00:00)
45:03 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 11:00:00) in space  (linearNDFast)
45:03 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:03 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 12:00:00) in space  (linearNDFast)
45:03 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:03 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 11:00:00, weight 0.75) and
                      after (2025-04-12 12:00:00, weight 0.25) in time
45:03 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:03 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.4919893141988 and -59.29010854392925 degrees.
45:03 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.4919893141988 and -59.29010854392925 degrees.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:03 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:03 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:03 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:03 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:03 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:03 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:03 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.177062 (min) 0.301889 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0964917 (min) 0.405244 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.472073 (min) -0.439734 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.95647 (min) 7.23104 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.53342 (min) -0.96022 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.45127 (min) 24.0372 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.29076 (min) 8.14578 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.743 (min) 33.1651 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: 1.19252e-06 (min) 0.000191303 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:03 DEBUG   opendrift:698: No elements hit coastline.
45:03 DEBUG   opendrift:737: No elements hit seafloor.
45:03 DEBUG   opendrift:1699: No elements to deactivate
45:03 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:03 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:03 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:03 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 10
45:03 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 0]
45:03 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 3]
45:03 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 10.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  2.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:03 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:03 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:03 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:03 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:03 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.038846478941100514
45:03 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:03 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:03 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:03 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:534: 10 elements reached seafloor, interacting with bottom
45:03 DEBUG   opendrift:742: Lifting 10 elements to seafloor.
45:03 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 24 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 28 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 24 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 30 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 32 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 29 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:03 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 29 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:03 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:03 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:03 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:03 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:03 INFO    opendrift.models.chemicaldrift:1882: partitioning: [440, 0, 47, 13, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:03 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:03 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:03 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:03 DEBUG   opendrift:737: No elements hit seafloor.
45:03 DEBUG   opendrift:2059: ======================================================================
45:03 INFO    opendrift:2060: 2025-04-12 11:44:52.046155 - step 3 of 96 - 500 active elements (0 deactivated)
45:03 DEBUG   opendrift:2066: 0 elements scheduled.
45:03 DEBUG   opendrift:2068: ======================================================================
45:03 DEBUG   opendrift:2079:                57.55242008286993 <- latitude  -> 57.655441920861385
45:03 DEBUG   opendrift:2084:                10.509515327035846 <- longitude -> 10.713045815617773
45:03 DEBUG   opendrift:2089:                -20.949355497370878   <- z ->   0.0
45:03 DEBUG   opendrift:2090: ---------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 11:00:00 (before)
                2025-04-12 12:00:00 (after)
45:03 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 11:00:00) in space  (linearNDFast)
45:03 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:03 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 12:00:00) in space  (linearNDFast)
45:03 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:03 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 11:00:00, weight 0.25) and
                      after (2025-04-12 12:00:00, weight 0.75) in time
45:03 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:03 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.49049576368202 and -59.2869652485963 degrees.
45:03 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.49049576368202 and -59.2869652485963 degrees.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:03 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:03 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:03 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:03 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:03 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:03 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:03 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:03 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:03 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:03 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:03 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.151416 (min) 0.301332 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.130682 (min) 0.37179 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.415816 (min) -0.384867 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.0057 (min) 7.37997 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.48077 (min) -0.642448 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.4005 (min) 24.1544 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.29103 (min) 8.18429 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.766 (min) 33.1686 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -1.19186e-05 (min) 0.000198554 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:03 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:03 DEBUG   opendrift:698: No elements hit coastline.
45:03 DEBUG   opendrift:737: No elements hit seafloor.
45:03 DEBUG   opendrift:1699: No elements to deactivate
45:03 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:03 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:03 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:03 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 16
45:03 DEBUG   opendrift.models.chemicaldrift:1473: old species: [2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
45:03 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
45:03 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 24.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0.  3.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:03 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:03 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:03 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:03 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:03 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04042364735624711
45:03 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:03 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:03 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:534: 15 elements reached seafloor, interacting with bottom
45:03 DEBUG   opendrift:742: Lifting 15 elements to seafloor.
45:03 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 28 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 30 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:03 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:03 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:03 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:03 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:03 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:03 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:03 INFO    opendrift.models.chemicaldrift:1882: partitioning: [428, 0, 43, 29, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:03 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:03 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:03 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:03 DEBUG   opendrift:737: No elements hit seafloor.
45:03 DEBUG   opendrift:2059: ======================================================================
45:03 INFO    opendrift:2060: 2025-04-12 12:14:52.046155 - step 4 of 96 - 500 active elements (0 deactivated)
45:03 DEBUG   opendrift:2066: 0 elements scheduled.
45:03 DEBUG   opendrift:2068: ======================================================================
45:03 DEBUG   opendrift:2079:                57.55581117069917 <- latitude  -> 57.65869989099168
45:03 DEBUG   opendrift:2084:                10.510936687521802 <- longitude -> 10.714882957591897
45:03 DEBUG   opendrift:2089:                -22.287415507054458   <- z ->   -0.027585266956027477
45:03 DEBUG   opendrift:2090: ---------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:03 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:03 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:03 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:03 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:03 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 12:00:00 (before)
                2025-04-12 13:00:00 (after)
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:05 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:05 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 38x35x7) for time after (2025-04-12 13:00:00)
45:05 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 12:00:00) in space  (linearNDFast)
45:05 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:05 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 13:00:00) in space  (linearNDFast)
45:05 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:05 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 12:00:00, weight 0.75) and
                      after (2025-04-12 13:00:00, weight 0.25) in time
45:05 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:05 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.48907440950977 and -59.285128104714886 degrees.
45:05 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.48907440950977 and -59.285128104714886 degrees.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:05 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:05 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:05 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:05 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:05 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:05 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:05 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.155674 (min) 0.325625 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.196624 (min) 0.31252 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.34936 (min) -0.321682 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.00283 (min) 7.44776 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.41262 (min) -0.2695 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35379 (min) 24.1174 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.29546 (min) 8.24881 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.8572 (min) 33.1643 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -1.94245e-06 (min) 0.000226996 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:05 DEBUG   opendrift:698: No elements hit coastline.
45:05 DEBUG   opendrift:737: No elements hit seafloor.
45:05 DEBUG   opendrift:1699: No elements to deactivate
45:05 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:05 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:05 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:05 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 7
45:05 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 2 0]
45:05 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 0 3]
45:05 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 30.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 4.  0.  0.  5.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:05 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:05 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:05 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:05 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:05 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04111600187915119
45:05 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:05 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:05 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:05 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:05 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:05 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:05 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:05 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:05 INFO    opendrift.models.chemicaldrift:1882: partitioning: [423, 0, 39, 38, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:05 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:05 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:05 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:05 DEBUG   opendrift:737: No elements hit seafloor.
45:05 DEBUG   opendrift:2059: ======================================================================
45:05 INFO    opendrift:2060: 2025-04-12 12:44:52.046155 - step 5 of 96 - 500 active elements (0 deactivated)
45:05 DEBUG   opendrift:2066: 0 elements scheduled.
45:05 DEBUG   opendrift:2068: ======================================================================
45:05 DEBUG   opendrift:2079:                57.55695625584938 <- latitude  -> 57.661382728029
45:05 DEBUG   opendrift:2084:                10.512251367211936 <- longitude -> 10.718350824524173
45:05 DEBUG   opendrift:2089:                -22.407331466674805   <- z ->   0.0
45:05 DEBUG   opendrift:2090: ---------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 12:00:00 (before)
                2025-04-12 13:00:00 (after)
45:05 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 12:00:00) in space  (linearNDFast)
45:05 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:05 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 13:00:00) in space  (linearNDFast)
45:05 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:05 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 12:00:00, weight 0.25) and
                      after (2025-04-12 13:00:00, weight 0.75) in time
45:05 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:05 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487759731518906 and -59.28166022860778 degrees.
45:05 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487759731518906 and -59.28166022860778 degrees.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:05 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:05 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:05 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:05 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:05 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:05 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:05 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:05 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:05 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:05 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:05 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.144754 (min) 0.350243 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.221893 (min) 0.299303 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.272634 (min) -0.249935 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.09905 (min) 7.44647 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.14525 (min) -0.0522943 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.3718 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.29795 (min) 8.23636 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.7991 (min) 33.1699 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -1.001e-05 (min) 0.000193206 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:05 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:05 DEBUG   opendrift:698: No elements hit coastline.
45:05 DEBUG   opendrift:737: No elements hit seafloor.
45:05 DEBUG   opendrift:1699: No elements to deactivate
45:05 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:05 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:05 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:05 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 14
45:05 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 2 0 0 0 0 0 0]
45:05 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 0 3 3 3 3 3 3]
45:05 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 43.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 5.  0.  0.  8.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:05 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:05 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:05 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:05 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:05 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04105890731773685
45:05 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:05 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:05 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 13 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 13 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 24 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 25 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:05 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:05 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:05 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:05 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:05 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:05 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:05 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:05 INFO    opendrift.models.chemicaldrift:1882: partitioning: [411, 0, 33, 56, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:05 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:05 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:05 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:05 DEBUG   opendrift:737: No elements hit seafloor.
45:05 DEBUG   opendrift:2059: ======================================================================
45:05 INFO    opendrift:2060: 2025-04-12 13:14:52.046155 - step 6 of 96 - 500 active elements (0 deactivated)
45:05 DEBUG   opendrift:2066: 0 elements scheduled.
45:05 DEBUG   opendrift:2068: ======================================================================
45:05 DEBUG   opendrift:2079:                57.560306236955725 <- latitude  -> 57.661852822670355
45:05 DEBUG   opendrift:2084:                10.512706509757088 <- longitude -> 10.716206265821453
45:05 DEBUG   opendrift:2089:                -22.960693359375   <- z ->   -0.01956616373626119
45:05 DEBUG   opendrift:2090: ---------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:05 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:05 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:05 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:05 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 13:00:00 (before)
                2025-04-12 14:00:00 (after)
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:08 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:08 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 39x35x7) for time after (2025-04-12 14:00:00)
45:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 13:00:00) in space  (linearNDFast)
45:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 14:00:00) in space  (linearNDFast)
45:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 13:00:00, weight 0.75) and
                      after (2025-04-12 14:00:00, weight 0.25) in time
45:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:08 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487304570747476 and -59.28380479400067 degrees.
45:08 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487304570747476 and -59.28380479400067 degrees.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:08 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:08 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:08 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:08 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:08 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:08 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:08 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.13919 (min) 0.311925 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.183598 (min) 0.265788 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.203001 (min) -0.185388 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.12881 (min) 7.40513 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.1607 (min) -0.0655994 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.2257 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.30248 (min) 8.30385 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.7879 (min) 33.1712 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -2.41128e-05 (min) 0.000180322 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:08 DEBUG   opendrift:698: No elements hit coastline.
45:08 DEBUG   opendrift:737: No elements hit seafloor.
45:08 DEBUG   opendrift:1699: No elements to deactivate
45:08 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:08 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:08 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:08 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 9
45:08 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0]
45:08 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3]
45:08 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 52.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 5.  0.  0. 13.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:08 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:08 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:08 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:08 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:08 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0407241987480208
45:08 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:08 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:08 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:08 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 9 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 9 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 26 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 27 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 29 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 23 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:08 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:08 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:08 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:08 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:08 INFO    opendrift.models.chemicaldrift:1882: partitioning: [402, 0, 30, 68, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:08 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:08 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:08 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:08 DEBUG   opendrift:737: No elements hit seafloor.
45:08 DEBUG   opendrift:2059: ======================================================================
45:08 INFO    opendrift:2060: 2025-04-12 13:44:52.046155 - step 7 of 96 - 500 active elements (0 deactivated)
45:08 DEBUG   opendrift:2066: 0 elements scheduled.
45:08 DEBUG   opendrift:2068: ======================================================================
45:08 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66236130656134
45:08 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.714541163109303
45:08 DEBUG   opendrift:2089:                -22.960693359375   <- z ->   0.0
45:08 DEBUG   opendrift:2090: ---------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 13:00:00 (before)
                2025-04-12 14:00:00 (after)
45:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 13:00:00) in space  (linearNDFast)
45:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 14:00:00) in space  (linearNDFast)
45:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 13:00:00, weight 0.25) and
                      after (2025-04-12 14:00:00, weight 0.75) in time
45:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:08 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28546990319766 degrees.
45:08 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28546990319766 degrees.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:08 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:08 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:08 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:08 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:08 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:08 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:08 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:08 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:08 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:08 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:08 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.130038 (min) 0.30817 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.217075 (min) 0.236328 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.142403 (min) -0.126479 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.10002 (min) 7.30867 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.36186 (min) -0.355105 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.103 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.30748 (min) 8.34881 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.8218 (min) 33.1726 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -2.71077e-05 (min) 0.000159953 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:08 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:08 DEBUG   opendrift:698: No elements hit coastline.
45:08 DEBUG   opendrift:737: No elements hit seafloor.
45:08 DEBUG   opendrift:1699: No elements to deactivate
45:08 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:08 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:08 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:08 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 16
45:08 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
45:08 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
45:08 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 68.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 5.  0.  0. 16.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:08 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:08 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:08 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:08 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:08 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03998983177886205
45:08 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:08 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:08 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:08 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 16 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 16 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:08 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:08 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:08 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:08 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:08 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:08 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:08 INFO    opendrift.models.chemicaldrift:1882: partitioning: [386, 0, 27, 87, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:08 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:08 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:08 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:08 DEBUG   opendrift:737: No elements hit seafloor.
45:08 DEBUG   opendrift:2059: ======================================================================
45:08 INFO    opendrift:2060: 2025-04-12 14:14:52.046155 - step 8 of 96 - 500 active elements (0 deactivated)
45:08 DEBUG   opendrift:2066: 0 elements scheduled.
45:08 DEBUG   opendrift:2068: ======================================================================
45:08 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66404771642798
45:08 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.717150148180382
45:08 DEBUG   opendrift:2089:                -22.960693359375   <- z ->   0.0
45:08 DEBUG   opendrift:2090: ---------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:08 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:08 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:08 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:08 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 14:00:00 (before)
                2025-04-12 15:00:00 (after)
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:10 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:10 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 39x35x7) for time after (2025-04-12 15:00:00)
45:10 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 14:00:00) in space  (linearNDFast)
45:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:10 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 15:00:00) in space  (linearNDFast)
45:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:10 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 14:00:00, weight 0.75) and
                      after (2025-04-12 15:00:00, weight 0.25) in time
45:10 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:10 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.282860917505765 degrees.
45:10 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.282860917505765 degrees.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:10 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:10 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:10 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:10 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:10 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:10 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:10 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.118551 (min) 0.310831 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.211436 (min) 0.246952 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.107229 (min) -0.0864986 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.83788 (min) 7.1736 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.46738 (min) -0.579689 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.3234 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.31001 (min) 8.41713 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.847 (min) 33.1736 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -3.52462e-05 (min) 0.00013478 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:10 DEBUG   opendrift:698: No elements hit coastline.
45:10 DEBUG   opendrift:737: No elements hit seafloor.
45:10 DEBUG   opendrift:1699: No elements to deactivate
45:10 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:10 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:10 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:10 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:10 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:10 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:10 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 74.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 5.  0.  0. 19.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:10 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:10 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:10 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:10 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:10 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03791813097534821
45:10 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:10 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:10 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:10 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:10 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 21 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:10 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:10 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:10 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:10 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:10 INFO    opendrift.models.chemicaldrift:1882: partitioning: [380, 0, 27, 93, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:10 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:10 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:10 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:10 DEBUG   opendrift:737: No elements hit seafloor.
45:10 DEBUG   opendrift:2059: ======================================================================
45:10 INFO    opendrift:2060: 2025-04-12 14:44:52.046155 - step 9 of 96 - 500 active elements (0 deactivated)
45:10 DEBUG   opendrift:2066: 0 elements scheduled.
45:10 DEBUG   opendrift:2068: ======================================================================
45:10 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66440145627145
45:10 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.716121584492411
45:10 DEBUG   opendrift:2089:                -23.05145745428361   <- z ->   0.0
45:10 DEBUG   opendrift:2090: ---------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 14:00:00 (before)
                2025-04-12 15:00:00 (after)
45:10 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 14:00:00) in space  (linearNDFast)
45:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:10 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 15:00:00) in space  (linearNDFast)
45:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:10 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 14:00:00, weight 0.25) and
                      after (2025-04-12 15:00:00, weight 0.75) in time
45:10 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:10 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28388947138563 degrees.
45:10 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28388947138563 degrees.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:10 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:10 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:10 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:10 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:10 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:10 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:10 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:10 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:10 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:10 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:10 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.104686 (min) 0.334341 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.292743 (min) 0.229055 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.0947011 (min) -0.0667835 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.31257 (min) 6.85068 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.4588 (min) -0.738193 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.2229 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.31003 (min) 8.41243 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.9354 (min) 33.1743 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -5.41409e-05 (min) 0.00011043 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:10 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:10 DEBUG   opendrift:698: No elements hit coastline.
45:10 DEBUG   opendrift:737: No elements hit seafloor.
45:10 DEBUG   opendrift:1699: No elements to deactivate
45:10 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:10 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:10 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:10 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 14
45:10 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
45:10 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
45:10 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[ 0.  0.  0. 88.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 5.  0.  0. 19.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
45:10 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:10 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:10 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:10 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:10 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03461909127659784
45:10 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:10 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:10 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:534: 14 elements reached seafloor, interacting with bottom
45:10 DEBUG   opendrift:742: Lifting 14 elements to seafloor.
45:10 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 31 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 22 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:10 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:10 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 19 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:10 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:10 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:10 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:10 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:10 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:10 INFO    opendrift.models.chemicaldrift:1882: partitioning: [366, 0, 26, 108, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:10 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:10 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:10 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:10 DEBUG   opendrift:737: No elements hit seafloor.
45:10 DEBUG   opendrift:2059: ======================================================================
45:10 INFO    opendrift:2060: 2025-04-12 15:14:52.046155 - step 10 of 96 - 500 active elements (0 deactivated)
45:10 DEBUG   opendrift:2066: 0 elements scheduled.
45:10 DEBUG   opendrift:2068: ======================================================================
45:10 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66494281865591
45:10 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.718963666103038
45:10 DEBUG   opendrift:2089:                -22.960693359375   <- z ->   0.0
45:10 DEBUG   opendrift:2090: ---------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:10 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:10 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:10 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:10 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 15:00:00 (before)
                2025-04-12 16:00:00 (after)
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:12 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:12 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 39x35x7) for time after (2025-04-12 16:00:00)
45:12 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 15:00:00) in space  (linearNDFast)
45:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:12 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 16:00:00) in space  (linearNDFast)
45:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:12 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 15:00:00, weight 0.75) and
                      after (2025-04-12 16:00:00, weight 0.25) in time
45:12 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28104739530228 degrees.
45:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.28104739530228 degrees.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:12 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:12 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.088968 (min) 0.34975 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.286915 (min) 0.253196 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.101698 (min) -0.067592 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.82806 (min) 6.52541 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.37733 (min) -0.741649 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.1409 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.31252 (min) 8.43255 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.8586 (min) 33.1746 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -6.13581e-05 (min) 0.000125627 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:12 DEBUG   opendrift:698: No elements hit coastline.
45:12 DEBUG   opendrift:742: Lifting 15 elements to seafloor.
45:12 DEBUG   opendrift:1699: No elements to deactivate
45:12 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:12 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:12 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:12 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 19
45:12 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
45:12 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
45:12 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 106.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.  20.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:12 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:12 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:12 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:12 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:12 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03130511068099454
45:12 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:12 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:12 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:12 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:534: 18 elements reached seafloor, interacting with bottom
45:12 DEBUG   opendrift:742: Lifting 18 elements to seafloor.
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:12 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:12 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:12 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:12 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:12 INFO    opendrift.models.chemicaldrift:1882: partitioning: [349, 0, 25, 126, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:12 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:12 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:12 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:12 DEBUG   opendrift:737: No elements hit seafloor.
45:12 DEBUG   opendrift:2059: ======================================================================
45:12 INFO    opendrift:2060: 2025-04-12 15:44:52.046155 - step 11 of 96 - 500 active elements (0 deactivated)
45:12 DEBUG   opendrift:2066: 0 elements scheduled.
45:12 DEBUG   opendrift:2068: ======================================================================
45:12 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66590993974941
45:12 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.721745990637459
45:12 DEBUG   opendrift:2089:                -23.137054443359375   <- z ->   -0.24814086207489672
45:12 DEBUG   opendrift:2090: ---------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 15:00:00 (before)
                2025-04-12 16:00:00 (after)
45:12 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 15:00:00) in space  (linearNDFast)
45:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:12 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 16:00:00) in space  (linearNDFast)
45:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:12 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 15:00:00, weight 0.25) and
                      after (2025-04-12 16:00:00, weight 0.75) in time
45:12 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27826506628669 degrees.
45:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27826506628669 degrees.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:12 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:12 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:12 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:12 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0713642 (min) 0.41009 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.263465 (min) 0.271468 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.12881 (min) -0.0896747 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.38504 (min) 6.20511 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -2.16434 (min) -0.587291 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.2161 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.31752 (min) 8.44531 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.8711 (min) 33.1747 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -6.05845e-05 (min) 9.08042e-05 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:12 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:12 DEBUG   opendrift:698: No elements hit coastline.
45:12 DEBUG   opendrift:742: Lifting 39 elements to seafloor.
45:12 DEBUG   opendrift:1699: No elements to deactivate
45:12 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:12 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:12 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:12 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:12 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:12 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:12 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 112.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.  20.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:12 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:12 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:12 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:12 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:12 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.028094443633372237
45:12 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:12 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:12 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:12 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:12 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:12 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:12 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 15 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 17 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 20 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:12 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:12 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:12 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:12 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:12 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:12 INFO    opendrift.models.chemicaldrift:1882: partitioning: [343, 0, 24, 133, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:12 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:12 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:12 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:12 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:12 DEBUG   opendrift:2059: ======================================================================
45:12 INFO    opendrift:2060: 2025-04-12 16:14:52.046155 - step 12 of 96 - 500 active elements (0 deactivated)
45:12 DEBUG   opendrift:2066: 0 elements scheduled.
45:12 DEBUG   opendrift:2068: ======================================================================
45:12 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66789460836814
45:12 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.724284894846871
45:12 DEBUG   opendrift:2089:                -23.114091873168945   <- z ->   0.0
45:12 DEBUG   opendrift:2090: ---------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 16:00:00 (before)
                2025-04-12 17:00:00 (after)
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:15 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:15 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 40x35x7) for time after (2025-04-12 17:00:00)
45:15 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 16:00:00) in space  (linearNDFast)
45:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:15 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 17:00:00) in space  (linearNDFast)
45:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:15 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 16:00:00, weight 0.75) and
                      after (2025-04-12 17:00:00, weight 0.25) in time
45:15 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27572616634843 degrees.
45:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27572616634843 degrees.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:15 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:15 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0544163 (min) 0.418642 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.22701 (min) 0.294228 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.164631 (min) -0.123304 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 2.73097 (min) 5.76416 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -1.83811 (min) -0.192729 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.4153 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.32248 (min) 8.39616 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.9659 (min) 33.1733 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -8.09427e-05 (min) 9.74489e-05 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:15 DEBUG   opendrift:698: No elements hit coastline.
45:15 DEBUG   opendrift:742: Lifting 65 elements to seafloor.
45:15 DEBUG   opendrift:1699: No elements to deactivate
45:15 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:15 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:15 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:15 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 18
45:15 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0]
45:15 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3]
45:15 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 129.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  21.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:15 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:15 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:15 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.024115052967790554
45:15 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:15 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:15 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:15 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:534: 17 elements reached seafloor, interacting with bottom
45:15 DEBUG   opendrift:742: Lifting 17 elements to seafloor.
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:15 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:15 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:15 INFO    opendrift.models.chemicaldrift:1882: partitioning: [327, 0, 22, 151, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:15 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:15 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:15 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:15 DEBUG   opendrift:737: No elements hit seafloor.
45:15 DEBUG   opendrift:2059: ======================================================================
45:15 INFO    opendrift:2060: 2025-04-12 16:44:52.046155 - step 13 of 96 - 500 active elements (0 deactivated)
45:15 DEBUG   opendrift:2066: 0 elements scheduled.
45:15 DEBUG   opendrift:2068: ======================================================================
45:15 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.66978587662161
45:15 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.729480052266732
45:15 DEBUG   opendrift:2089:                -23.080442428588867   <- z ->   -0.058859677825225276
45:15 DEBUG   opendrift:2090: ---------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 16:00:00 (before)
                2025-04-12 17:00:00 (after)
45:15 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 16:00:00) in space  (linearNDFast)
45:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:15 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 17:00:00) in space  (linearNDFast)
45:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:15 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 16:00:00, weight 0.25) and
                      after (2025-04-12 17:00:00, weight 0.75) in time
45:15 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27053099200514 degrees.
45:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.27053099200514 degrees.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:15 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:15 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:15 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:15 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0631612 (min) 0.382658 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.198324 (min) 0.307761 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.210105 (min) -0.168684 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 1.86208 (min) 5.23145 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -1.44191 (min) 0.446321 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.5921 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.32569 (min) 8.40825 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.9721 (min) 33.1703 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000100335 (min) 8.73427e-05 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:15 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:15 DEBUG   opendrift:698: No elements hit coastline.
45:15 DEBUG   opendrift:742: Lifting 85 elements to seafloor.
45:15 DEBUG   opendrift:1699: No elements to deactivate
45:15 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:15 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:15 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:15 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 8
45:15 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0]
45:15 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3]
45:15 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 137.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  22.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:15 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:15 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:15 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.01979666069596798
45:15 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:15 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:15 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:15 DEBUG   opendrift.models.oceandrift:534: 8 elements reached seafloor, interacting with bottom
45:15 DEBUG   opendrift:742: Lifting 8 elements to seafloor.
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:15 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:15 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:15 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:15 INFO    opendrift.models.chemicaldrift:1882: partitioning: [319, 0, 22, 159, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:15 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:15 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:15 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:15 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:15 DEBUG   opendrift:2059: ======================================================================
45:15 INFO    opendrift:2060: 2025-04-12 17:14:52.046155 - step 14 of 96 - 500 active elements (0 deactivated)
45:15 DEBUG   opendrift:2066: 0 elements scheduled.
45:15 DEBUG   opendrift:2068: ======================================================================
45:15 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.67192273381756
45:15 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.740017312078457
45:15 DEBUG   opendrift:2089:                -23.03589630126953   <- z ->   0.0
45:15 DEBUG   opendrift:2090: ---------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 17:00:00 (before)
                2025-04-12 18:00:00 (after)
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:17 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:17 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 41x36x7) for time after (2025-04-12 18:00:00)
45:17 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 17:00:00) in space  (linearNDFast)
45:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:17 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 18:00:00) in space  (linearNDFast)
45:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:17 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 17:00:00, weight 0.75) and
                      after (2025-04-12 18:00:00, weight 0.25) in time
45:17 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:17 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.259993724093604 degrees.
45:17 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.259993724093604 degrees.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:17 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:17 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:17 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:17 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:17 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:17 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:17 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0787452 (min) 0.385163 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.148695 (min) 0.322799 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.254821 (min) -0.214331 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 1.17149 (min) 4.57076 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -1.09628 (min) 0.827184 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.739 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.32294 (min) 8.42974 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.9912 (min) 33.1658 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000116754 (min) 7.24407e-05 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:17 DEBUG   opendrift:698: No elements hit coastline.
45:17 DEBUG   opendrift:742: Lifting 103 elements to seafloor.
45:17 DEBUG   opendrift:1699: No elements to deactivate
45:17 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:17 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:17 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:17 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 8
45:17 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0]
45:17 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3]
45:17 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 145.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  22.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:17 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:17 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:17 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:17 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:17 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.01510142207692745
45:17 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:17 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:17 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:534: 8 elements reached seafloor, interacting with bottom
45:17 DEBUG   opendrift:742: Lifting 8 elements to seafloor.
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:17 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:17 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:17 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:17 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:17 INFO    opendrift.models.chemicaldrift:1882: partitioning: [311, 0, 22, 167, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:17 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:17 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:17 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:17 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:17 DEBUG   opendrift:2059: ======================================================================
45:17 INFO    opendrift:2060: 2025-04-12 17:44:52.046155 - step 15 of 96 - 500 active elements (0 deactivated)
45:17 DEBUG   opendrift:2066: 0 elements scheduled.
45:17 DEBUG   opendrift:2068: ======================================================================
45:17 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.675571595673404
45:17 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.748165387036556
45:17 DEBUG   opendrift:2089:                -22.99088478088379   <- z ->   -0.30530330059375466
45:17 DEBUG   opendrift:2090: ---------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 17:00:00 (before)
                2025-04-12 18:00:00 (after)
45:17 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 17:00:00) in space  (linearNDFast)
45:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:17 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 18:00:00) in space  (linearNDFast)
45:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:17 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 17:00:00, weight 0.25) and
                      after (2025-04-12 18:00:00, weight 0.75) in time
45:17 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:17 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.25184565743751 degrees.
45:17 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.25184565743751 degrees.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:17 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:17 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:17 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:17 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:17 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:17 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:17 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:17 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:17 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:17 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:17 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0984199 (min) 0.382985 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.106798 (min) 0.330101 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.298437 (min) -0.260018 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 0.0882661 (min) 3.80659 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -0.847018 (min) 1.05142 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.7833 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.32755 (min) 8.41653 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.0063 (min) 33.1602 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000138741 (min) 5.14415e-05 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:17 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:17 DEBUG   opendrift:698: No elements hit coastline.
45:17 DEBUG   opendrift:742: Lifting 130 elements to seafloor.
45:17 DEBUG   opendrift:1699: No elements to deactivate
45:17 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:17 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:17 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:17 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 11
45:17 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 0 0]
45:17 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 3 3]
45:17 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 156.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  22.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:17 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:17 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:17 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:17 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:17 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.010482668175430863
45:17 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:17 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:17 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:534: 11 elements reached seafloor, interacting with bottom
45:17 DEBUG   opendrift:742: Lifting 11 elements to seafloor.
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:17 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:17 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:17 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:17 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:17 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:17 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:17 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:17 INFO    opendrift.models.chemicaldrift:1882: partitioning: [300, 0, 20, 180, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:17 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:17 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:17 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:17 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:17 DEBUG   opendrift:2059: ======================================================================
45:17 INFO    opendrift:2060: 2025-04-12 18:14:52.046155 - step 16 of 96 - 500 active elements (0 deactivated)
45:17 DEBUG   opendrift:2066: 0 elements scheduled.
45:17 DEBUG   opendrift:2068: ======================================================================
45:17 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.679332169272215
45:17 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.754250678129846
45:17 DEBUG   opendrift:2089:                -22.95751953125   <- z ->   -0.17537745943496158
45:17 DEBUG   opendrift:2090: ---------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:17 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:17 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:17 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:17 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:17 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 18:00:00 (before)
                2025-04-12 19:00:00 (after)
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:20 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:20 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 42x36x7) for time after (2025-04-12 19:00:00)
45:20 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 18:00:00) in space  (linearNDFast)
45:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:20 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 19:00:00) in space  (linearNDFast)
45:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:20 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 18:00:00, weight 0.75) and
                      after (2025-04-12 19:00:00, weight 0.25) in time
45:20 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.24576036585821 degrees.
45:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.24576036585821 degrees.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:20 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:20 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:20 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:20 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:20 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:20 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:20 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.123696 (min) 0.437416 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0718155 (min) 0.350318 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.337172 (min) -0.300149 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -0.870532 (min) 3.05946 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: -0.059715 (min) 1.81469 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.7448 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3328 (min) 8.45636 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 25.9371 (min) 33.1554 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000159774 (min) 4.74837e-05 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:20 DEBUG   opendrift:698: No elements hit coastline.
45:20 DEBUG   opendrift:742: Lifting 142 elements to seafloor.
45:20 DEBUG   opendrift:1699: No elements to deactivate
45:20 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:20 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:20 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:20 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 10
45:20 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0 0]
45:20 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3 3]
45:20 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 166.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  24.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:20 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:20 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:20 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:20 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:20 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.006767922823213007
45:20 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:20 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:20 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:20 DEBUG   opendrift.models.oceandrift:534: 10 elements reached seafloor, interacting with bottom
45:20 DEBUG   opendrift:742: Lifting 10 elements to seafloor.
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:20 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:20 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:20 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:20 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:20 INFO    opendrift.models.chemicaldrift:1882: partitioning: [290, 0, 19, 191, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:20 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:20 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:20 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:20 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:20 DEBUG   opendrift:2059: ======================================================================
45:20 INFO    opendrift:2060: 2025-04-12 18:44:52.046155 - step 17 of 96 - 500 active elements (0 deactivated)
45:20 DEBUG   opendrift:2066: 0 elements scheduled.
45:20 DEBUG   opendrift:2068: ======================================================================
45:20 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.68340797385285
45:20 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.761759059101587
45:20 DEBUG   opendrift:2089:                -22.916807174682617   <- z ->   -0.2280794104631688
45:20 DEBUG   opendrift:2090: ---------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 18:00:00 (before)
                2025-04-12 19:00:00 (after)
45:20 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 18:00:00) in space  (linearNDFast)
45:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:20 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 19:00:00) in space  (linearNDFast)
45:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:20 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 18:00:00, weight 0.25) and
                      after (2025-04-12 19:00:00, weight 0.75) in time
45:20 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.23825197916802 degrees.
45:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.23825197916802 degrees.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:20 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:20 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:20 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:20 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:20 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:20 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:20 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:20 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:20 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:20 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.111195 (min) 0.445058 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0261881 (min) 0.362583 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.371023 (min) -0.335311 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -1.67665 (min) 2.23222 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 0.138695 (min) 2.0763 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.6651 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.33748 (min) 8.40567 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.0322 (min) 33.1504 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000174542 (min) 3.99416e-05 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:20 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:20 DEBUG   opendrift:698: No elements hit coastline.
45:20 DEBUG   opendrift:742: Lifting 162 elements to seafloor.
45:20 DEBUG   opendrift:1699: No elements to deactivate
45:20 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:20 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:20 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:20 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:20 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:20 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:20 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 172.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  25.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:20 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:20 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:20 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:20 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:20 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.005150545584373109
45:20 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:20 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:20 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:20 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:20 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:20 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:20 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:20 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:20 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:20 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:20 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:20 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:20 INFO    opendrift.models.chemicaldrift:1882: partitioning: [284, 0, 17, 199, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:20 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:20 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:20 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:20 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:20 DEBUG   opendrift:2059: ======================================================================
45:20 INFO    opendrift:2060: 2025-04-12 19:14:52.046155 - step 18 of 96 - 500 active elements (0 deactivated)
45:20 DEBUG   opendrift:2066: 0 elements scheduled.
45:20 DEBUG   opendrift:2068: ======================================================================
45:20 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.68775395425377
45:20 DEBUG   opendrift:2084:                10.51296588553951 <- longitude -> 10.769701176163265
45:20 DEBUG   opendrift:2089:                -22.88138771057129   <- z ->   -0.3405161685937793
45:20 DEBUG   opendrift:2090: ---------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 19:00:00 (before)
                2025-04-12 20:00:00 (after)
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:22 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:22 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 44x36x7) for time after (2025-04-12 20:00:00)
45:22 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 19:00:00) in space  (linearNDFast)
45:22 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:22 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 20:00:00) in space  (linearNDFast)
45:22 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:22 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 19:00:00, weight 0.75) and
                      after (2025-04-12 20:00:00, weight 0.25) in time
45:22 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:22 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.23030985568394 degrees.
45:22 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.23030985568394 degrees.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:22 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:22 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:22 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:22 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:22 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:22 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:22 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.128188 (min) 0.445469 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.007504 (min) 0.373191 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.403166 (min) -0.367726 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -2.18854 (min) 1.24723 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 0.666466 (min) 2.68438 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.5604 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.34 (min) 8.37491 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.051 (min) 33.1456 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.0001862 (min) 3.75883e-05 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:22 DEBUG   opendrift:698: No elements hit coastline.
45:22 DEBUG   opendrift:742: Lifting 170 elements to seafloor.
45:22 DEBUG   opendrift:1699: No elements to deactivate
45:22 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:22 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:22 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:22 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:22 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 2 0 0]
45:22 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 0 3 3]
45:22 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 176.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  27.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:22 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:22 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:22 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:22 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:22 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.00752239619010085
45:22 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:22 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:22 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:22 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:22 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:22 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:22 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:22 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:22 INFO    opendrift.models.chemicaldrift:1882: partitioning: [281, 0, 16, 203, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:22 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:22 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:22 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:22 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:22 DEBUG   opendrift:2059: ======================================================================
45:22 INFO    opendrift:2060: 2025-04-12 19:44:52.046155 - step 19 of 96 - 500 active elements (0 deactivated)
45:22 DEBUG   opendrift:2066: 0 elements scheduled.
45:22 DEBUG   opendrift:2068: ======================================================================
45:22 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.692157141602415
45:22 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.7776552371599
45:22 DEBUG   opendrift:2089:                -22.848657608032227   <- z ->   -0.3096868628012067
45:22 DEBUG   opendrift:2090: ---------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 19:00:00 (before)
                2025-04-12 20:00:00 (after)
45:22 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 19:00:00) in space  (linearNDFast)
45:22 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:22 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 20:00:00) in space  (linearNDFast)
45:22 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:22 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 19:00:00, weight 0.25) and
                      after (2025-04-12 20:00:00, weight 0.75) in time
45:22 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:22 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.22235580663783 degrees.
45:22 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.22235580663783 degrees.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:22 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:22 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:22 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:22 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:22 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:22 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:22 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:22 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:22 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:22 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:22 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.133792 (min) 0.451565 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0421331 (min) 0.412993 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.433367 (min) -0.397671 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -2.44263 (min) 0.806411 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 0.920696 (min) 2.8582 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 24.6805 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.34 (min) 8.39279 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.0593 (min) 33.1409 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000193299 (min) 3.55083e-05 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:22 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:22 DEBUG   opendrift:698: No elements hit coastline.
45:22 DEBUG   opendrift:742: Lifting 190 elements to seafloor.
45:22 DEBUG   opendrift:1699: No elements to deactivate
45:22 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:22 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:22 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:22 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 9
45:22 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0 0]
45:22 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3 3]
45:22 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 185.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  27.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:22 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:22 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:22 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:22 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:22 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.008931715173701421
45:22 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:22 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:22 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:534: 9 elements reached seafloor, interacting with bottom
45:22 DEBUG   opendrift:742: Lifting 9 elements to seafloor.
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:22 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:22 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:22 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:22 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:22 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:22 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:22 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:22 INFO    opendrift.models.chemicaldrift:1882: partitioning: [272, 0, 14, 214, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:22 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:22 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:22 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:22 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:22 DEBUG   opendrift:2059: ======================================================================
45:22 INFO    opendrift:2060: 2025-04-12 20:14:52.046155 - step 20 of 96 - 500 active elements (0 deactivated)
45:22 DEBUG   opendrift:2066: 0 elements scheduled.
45:22 DEBUG   opendrift:2068: ======================================================================
45:22 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.69657333875924
45:22 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.784977942302799
45:22 DEBUG   opendrift:2089:                -23.498296418662587   <- z ->   -0.09039423689175119
45:22 DEBUG   opendrift:2090: ---------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:22 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:22 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:22 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:22 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 20:00:00 (before)
                2025-04-12 21:00:00 (after)
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:25 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:25 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 45x36x7) for time after (2025-04-12 21:00:00)
45:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 20:00:00) in space  (linearNDFast)
45:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 21:00:00) in space  (linearNDFast)
45:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 20:00:00, weight 0.75) and
                      after (2025-04-12 21:00:00, weight 0.25) in time
45:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.21503310041072 degrees.
45:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.21503310041072 degrees.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:25 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:25 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0684727 (min) 0.471144 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0245618 (min) 0.414555 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.463075 (min) -0.426941 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -2.82377 (min) -0.141851 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.53635 (min) 3.34305 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 25.0556 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.34248 (min) 8.35236 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.0743 (min) 33.1336 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000196983 (min) 5.20323e-05 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:25 DEBUG   opendrift:698: No elements hit coastline.
45:25 DEBUG   opendrift:742: Lifting 201 elements to seafloor.
45:25 DEBUG   opendrift:1699: No elements to deactivate
45:25 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:25 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:25 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:25 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:25 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0]
45:25 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3]
45:25 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 190.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  29.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:25 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:25 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:25 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.012412907070627166
45:25 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:25 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:25 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:534: 5 elements reached seafloor, interacting with bottom
45:25 DEBUG   opendrift:742: Lifting 5 elements to seafloor.
45:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:25 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:25 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:25 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:25 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:25 INFO    opendrift.models.chemicaldrift:1882: partitioning: [267, 0, 12, 221, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:25 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:25 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:25 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:25 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:25 DEBUG   opendrift:2059: ======================================================================
45:25 INFO    opendrift:2060: 2025-04-12 20:44:52.046155 - step 21 of 96 - 500 active elements (0 deactivated)
45:25 DEBUG   opendrift:2066: 0 elements scheduled.
45:25 DEBUG   opendrift:2068: ======================================================================
45:25 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.70136336788616
45:25 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.793270586335478
45:25 DEBUG   opendrift:2089:                -23.546478271484375   <- z ->   -0.11113321040041824
45:25 DEBUG   opendrift:2090: ---------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 20:00:00 (before)
                2025-04-12 21:00:00 (after)
45:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 20:00:00) in space  (linearNDFast)
45:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 21:00:00) in space  (linearNDFast)
45:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 20:00:00, weight 0.25) and
                      after (2025-04-12 21:00:00, weight 0.75) in time
45:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.20674046056277 degrees.
45:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.20674046056277 degrees.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:25 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:25 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:25 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:25 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0802074 (min) 0.483853 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.00933135 (min) 0.449743 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.492242 (min) -0.455056 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.1963 (min) -1.63783 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.68385 (min) 3.95672 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 25.5386 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.34748 (min) 8.35079 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1026 (min) 33.1262 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000196491 (min) 8.08863e-05 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:25 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:25 DEBUG   opendrift:698: No elements hit coastline.
45:25 DEBUG   opendrift:742: Lifting 219 elements to seafloor.
45:25 DEBUG   opendrift:1699: No elements to deactivate
45:25 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:25 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:25 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:25 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:25 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0 2 0]
45:25 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3 0 3]
45:25 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 192.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  31.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:25 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:25 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:25 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.017490304493062263
45:25 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:25 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:25 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:25 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:25 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:25 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:25 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:25 INFO    opendrift.models.chemicaldrift:1882: partitioning: [267, 0, 11, 222, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:25 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:25 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:25 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:25 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:25 DEBUG   opendrift:2059: ======================================================================
45:25 INFO    opendrift:2060: 2025-04-12 21:14:52.046155 - step 22 of 96 - 500 active elements (0 deactivated)
45:25 DEBUG   opendrift:2066: 0 elements scheduled.
45:25 DEBUG   opendrift:2068: ======================================================================
45:25 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.70639186794831
45:25 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.801183764579632
45:25 DEBUG   opendrift:2089:                -23.518159866333008   <- z ->   -0.04766573029340693
45:25 DEBUG   opendrift:2090: ---------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 21:00:00 (before)
                2025-04-12 22:00:00 (after)
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:27 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:27 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 47x37x7) for time after (2025-04-12 22:00:00)
45:27 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 21:00:00) in space  (linearNDFast)
45:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:27 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 22:00:00) in space  (linearNDFast)
45:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:27 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 21:00:00, weight 0.75) and
                      after (2025-04-12 22:00:00, weight 0.25) in time
45:27 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.19882726739648 degrees.
45:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.19882726739648 degrees.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:27 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:27 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.107547 (min) 0.491603 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0915004 (min) 0.460405 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.516953 (min) -0.480535 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.63915 (min) -2.40473 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.16557 (min) 4.37693 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 25.8389 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35 (min) 8.31039 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1191 (min) 33.1386 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000188454 (min) 0.000111149 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:27 DEBUG   opendrift:698: No elements hit coastline.
45:27 DEBUG   opendrift:742: Lifting 222 elements to seafloor.
45:27 DEBUG   opendrift:1699: No elements to deactivate
45:27 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:27 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:27 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:27 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:27 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0]
45:27 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3]
45:27 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 197.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  31.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:27 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:27 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:27 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:27 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:27 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.022398957512932378
45:27 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:27 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:27 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:534: 5 elements reached seafloor, interacting with bottom
45:27 DEBUG   opendrift:742: Lifting 5 elements to seafloor.
45:27 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:27 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:27 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:27 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:27 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:27 INFO    opendrift.models.chemicaldrift:1882: partitioning: [262, 0, 11, 227, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:27 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:27 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:27 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:27 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:27 DEBUG   opendrift:2059: ======================================================================
45:27 INFO    opendrift:2060: 2025-04-12 21:44:52.046155 - step 23 of 96 - 500 active elements (0 deactivated)
45:27 DEBUG   opendrift:2066: 0 elements scheduled.
45:27 DEBUG   opendrift:2068: ======================================================================
45:27 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.71174407399086
45:27 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.806817104924548
45:27 DEBUG   opendrift:2089:                -23.775777322184922   <- z ->   -0.28783810511624297
45:27 DEBUG   opendrift:2090: ---------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 21:00:00 (before)
                2025-04-12 22:00:00 (after)
45:27 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 21:00:00) in space  (linearNDFast)
45:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:27 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 22:00:00) in space  (linearNDFast)
45:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:27 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 21:00:00, weight 0.25) and
                      after (2025-04-12 22:00:00, weight 0.75) in time
45:27 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.19319392928892 degrees.
45:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.19319392928892 degrees.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:27 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:27 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:27 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:27 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.117048 (min) 0.49695 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0852243 (min) 0.468468 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.536428 (min) -0.503567 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.39726 (min) -2.36512 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.96966 (min) 4.91026 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 26.1413 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35 (min) 8.2889 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1526 (min) 33.2972 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000172739 (min) 0.000142845 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:27 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:27 DEBUG   opendrift:698: No elements hit coastline.
45:27 DEBUG   opendrift:742: Lifting 227 elements to seafloor.
45:27 DEBUG   opendrift:1699: No elements to deactivate
45:27 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:27 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:27 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:27 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:27 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:27 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:27 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 203.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  31.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:27 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:27 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:27 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:27 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:27 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03035549523824744
45:27 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:27 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:27 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:27 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:27 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:27 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:27 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:27 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:27 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:27 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:27 INFO    opendrift.models.chemicaldrift:1882: partitioning: [256, 0, 11, 233, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:27 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:27 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:27 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:27 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:27 DEBUG   opendrift:2059: ======================================================================
45:27 INFO    opendrift:2060: 2025-04-12 22:14:52.046155 - step 24 of 96 - 500 active elements (0 deactivated)
45:27 DEBUG   opendrift:2066: 0 elements scheduled.
45:27 DEBUG   opendrift:2068: ======================================================================
45:27 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.71723512918211
45:27 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.813028441118046
45:27 DEBUG   opendrift:2089:                -24.773331007829086   <- z ->   -0.3675518047727122
45:27 DEBUG   opendrift:2090: ---------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:27 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 22:00:00 (before)
                2025-04-12 23:00:00 (after)
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:29 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:29 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x37x7) for time after (2025-04-12 23:00:00)
45:29 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 22:00:00) in space  (linearNDFast)
45:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:29 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 23:00:00) in space  (linearNDFast)
45:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:29 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 22:00:00, weight 0.75) and
                      after (2025-04-12 23:00:00, weight 0.25) in time
45:29 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:29 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.186982591751786 degrees.
45:29 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.186982591751786 degrees.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:29 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:29 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:29 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:29 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:29 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:29 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:29 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.118584 (min) 0.492802 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0771431 (min) 0.494748 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.547571 (min) -0.512667 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.66798 (min) -2.53449 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.72895 (min) 5.09451 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 26.3947 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35007 (min) 8.29182 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1373 (min) 33.1329 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000148595 (min) 0.000170354 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:29 DEBUG   opendrift:698: No elements hit coastline.
45:29 DEBUG   opendrift:742: Lifting 233 elements to seafloor.
45:29 DEBUG   opendrift:1699: No elements to deactivate
45:29 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:29 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:29 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:29 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
45:29 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0]
45:29 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3]
45:29 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 206.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  31.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:29 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:29 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:29 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:29 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:29 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.032962515807572236
45:29 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:29 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:29 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:29 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
45:29 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:29 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 16 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:29 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 14 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:29 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:29 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:29 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:29 INFO    opendrift.models.chemicaldrift:1882: partitioning: [253, 0, 10, 237, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:29 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:29 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:29 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:29 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:29 DEBUG   opendrift:2059: ======================================================================
45:29 INFO    opendrift:2060: 2025-04-12 22:44:52.046155 - step 25 of 96 - 500 active elements (0 deactivated)
45:29 DEBUG   opendrift:2066: 0 elements scheduled.
45:29 DEBUG   opendrift:2068: ======================================================================
45:29 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72146642977745
45:29 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.819629240474693
45:29 DEBUG   opendrift:2089:                -25.134990692138672   <- z ->   -0.20964689674531634
45:29 DEBUG   opendrift:2090: ---------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 22:00:00 (before)
                2025-04-12 23:00:00 (after)
45:29 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 22:00:00) in space  (linearNDFast)
45:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:29 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-12 23:00:00) in space  (linearNDFast)
45:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:29 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 22:00:00, weight 0.25) and
                      after (2025-04-12 23:00:00, weight 0.75) in time
45:29 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:29 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.18038178812021 degrees.
45:29 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.18038178812021 degrees.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:29 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:29 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:29 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:29 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:29 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:29 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:29 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:29 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:29 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:29 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:29 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.130658 (min) 0.465835 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0577328 (min) 0.491837 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.544318 (min) -0.506695 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.37493 (min) -3.17654 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.52194 (min) 4.81187 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 26.8337 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35 (min) 8.26292 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1995 (min) 33.4936 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00013538 (min) 0.000193602 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:29 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:29 DEBUG   opendrift:698: No elements hit coastline.
45:29 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:29 DEBUG   opendrift:1699: No elements to deactivate
45:29 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:29 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:29 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:29 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:29 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:29 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:29 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 212.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  32.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:29 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:29 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:29 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:29 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:29 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.02909300534123488
45:29 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:29 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:29 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:29 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:29 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 12 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 18 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 13 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:29 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:29 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:29 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:29 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:29 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:29 INFO    opendrift.models.chemicaldrift:1882: partitioning: [247, 0, 10, 243, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:29 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:29 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:29 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:29 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:29 DEBUG   opendrift:2059: ======================================================================
45:29 INFO    opendrift:2060: 2025-04-12 23:14:52.046155 - step 26 of 96 - 500 active elements (0 deactivated)
45:29 DEBUG   opendrift:2066: 0 elements scheduled.
45:29 DEBUG   opendrift:2068: ======================================================================
45:29 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.724234728357835
45:29 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.822859755858929
45:29 DEBUG   opendrift:2089:                -25.672097262254468   <- z ->   -0.09600964315068405
45:29 DEBUG   opendrift:2090: ---------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:29 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:29 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:29 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:29 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:29 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 23:00:00 (before)
                2025-04-13 00:00:00 (after)
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:31 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:31 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x37x7) for time after (2025-04-13 00:00:00)
45:31 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 23:00:00) in space  (linearNDFast)
45:31 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:31 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 00:00:00) in space  (linearNDFast)
45:31 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:31 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 23:00:00, weight 0.75) and
                      after (2025-04-13 00:00:00, weight 0.25) in time
45:31 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:31 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.17715126144961 degrees.
45:31 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.17715126144961 degrees.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:31 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:31 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:31 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:31 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:31 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:31 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:31 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.139071 (min) 0.49731 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0159503 (min) 0.4944 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.521464 (min) -0.481596 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.78351 (min) -3.21433 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.55366 (min) 4.37415 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 27.8584 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35162 (min) 8.26854 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.1586 (min) 33.5666 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00014073 (min) 0.000206422 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:31 DEBUG   opendrift:698: No elements hit coastline.
45:31 DEBUG   opendrift:737: No elements hit seafloor.
45:31 DEBUG   opendrift:1699: No elements to deactivate
45:31 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:31 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:31 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:31 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:31 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 2 3 3]
45:31 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 0 0 0]
45:31 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 214.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  3.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:31 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:31 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:31 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:31 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:31 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.023973506328488978
45:31 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:31 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:31 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:31 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:31 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:31 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:31 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:31 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:31 INFO    opendrift.models.chemicaldrift:1882: partitioning: [248, 0, 9, 243, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:31 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:31 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:31 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:31 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:31 DEBUG   opendrift:2059: ======================================================================
45:31 INFO    opendrift:2060: 2025-04-12 23:44:52.046155 - step 27 of 96 - 500 active elements (0 deactivated)
45:31 DEBUG   opendrift:2066: 0 elements scheduled.
45:31 DEBUG   opendrift:2068: ======================================================================
45:31 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.726036478108256
45:31 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.82940306586425
45:31 DEBUG   opendrift:2089:                -25.134990692138672   <- z ->   -0.05712998804832581
45:31 DEBUG   opendrift:2090: ---------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-12 23:00:00 (before)
                2025-04-13 00:00:00 (after)
45:31 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-12 23:00:00) in space  (linearNDFast)
45:31 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:31 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 00:00:00) in space  (linearNDFast)
45:31 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:31 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-12 23:00:00, weight 0.25) and
                      after (2025-04-13 00:00:00, weight 0.75) in time
45:31 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:31 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.170607968289765 degrees.
45:31 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.170607968289765 degrees.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:31 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:31 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:31 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:31 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:31 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:31 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:31 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:31 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:31 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:31 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:31 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.143757 (min) 0.485218 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0144817 (min) 0.443258 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.479583 (min) -0.437307 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.3125 (min) -2.53286 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.75465 (min) 3.85662 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 28.8204 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35255 (min) 8.21158 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.2761 (min) 33.439 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000132683 (min) 0.000208629 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:31 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:31 DEBUG   opendrift:698: No elements hit coastline.
45:31 DEBUG   opendrift:737: No elements hit seafloor.
45:31 DEBUG   opendrift:1699: No elements to deactivate
45:31 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:31 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:31 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:31 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:31 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0]
45:31 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3]
45:31 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 218.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  3.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:31 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:31 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:31 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:31 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:31 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.01863608452047086
45:31 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:31 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:31 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:31 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:31 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:31 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:31 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:31 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:31 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:31 INFO    opendrift.models.chemicaldrift:1882: partitioning: [244, 0, 9, 247, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:31 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:31 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:31 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:31 DEBUG   opendrift:737: No elements hit seafloor.
45:31 DEBUG   opendrift:2059: ======================================================================
45:31 INFO    opendrift:2060: 2025-04-13 00:14:52.046155 - step 28 of 96 - 500 active elements (0 deactivated)
45:31 DEBUG   opendrift:2066: 0 elements scheduled.
45:31 DEBUG   opendrift:2068: ======================================================================
45:31 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72711315272243
45:31 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.838310232280103
45:31 DEBUG   opendrift:2089:                -26.127352384252948   <- z ->   0.0
45:31 DEBUG   opendrift:2090: ---------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:31 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:31 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:31 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:31 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:31 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 00:00:00 (before)
                2025-04-13 01:00:00 (after)
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:34 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:34 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 51x38x7) for time after (2025-04-13 01:00:00)
45:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 00:00:00) in space  (linearNDFast)
45:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 01:00:00) in space  (linearNDFast)
45:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 00:00:00, weight 0.75) and
                      after (2025-04-13 01:00:00, weight 0.25) in time
45:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.16170078148794 degrees.
45:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.16170078148794 degrees.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:34 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:34 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.146163 (min) 0.499176 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.052161 (min) 0.432242 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.426412 (min) -0.383787 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.24089 (min) -2.22956 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.41569 (min) 3.20766 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 29.5394 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35502 (min) 8.27437 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.106 (min) 33.7231 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000111656 (min) 0.000211433 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:34 DEBUG   opendrift:698: No elements hit coastline.
45:34 DEBUG   opendrift:737: No elements hit seafloor.
45:34 DEBUG   opendrift:1699: No elements to deactivate
45:34 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:34 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:34 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:34 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
45:34 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
45:34 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
45:34 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 220.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  3.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:34 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:34 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:34 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:34 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:34 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.014829031380746233
45:34 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:34 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:34 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:34 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:34 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:34 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:34 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:34 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:34 INFO    opendrift.models.chemicaldrift:1882: partitioning: [242, 0, 9, 249, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:34 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:34 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:34 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:34 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:34 DEBUG   opendrift:2059: ======================================================================
45:34 INFO    opendrift:2060: 2025-04-13 00:44:52.046155 - step 29 of 96 - 500 active elements (0 deactivated)
45:34 DEBUG   opendrift:2066: 0 elements scheduled.
45:34 DEBUG   opendrift:2068: ======================================================================
45:34 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72778843028133
45:34 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.845160341332829
45:34 DEBUG   opendrift:2089:                -27.664384412535775   <- z ->   -0.17251044188383252
45:34 DEBUG   opendrift:2090: ---------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 00:00:00 (before)
                2025-04-13 01:00:00 (after)
45:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 00:00:00) in space  (linearNDFast)
45:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 01:00:00) in space  (linearNDFast)
45:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 00:00:00, weight 0.25) and
                      after (2025-04-13 01:00:00, weight 0.75) in time
45:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.154850676495826 degrees.
45:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.154850676495826 degrees.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:34 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:34 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:34 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:34 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.14625 (min) 0.498124 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0928431 (min) 0.38683 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.363336 (min) -0.320803 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.45852 (min) -2.59931 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.90336 (min) 2.71839 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 30.2954 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35556 (min) 8.21739 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.3279 (min) 33.8245 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -8.79622e-05 (min) 0.000230882 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:34 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:34 DEBUG   opendrift:698: No elements hit coastline.
45:34 DEBUG   opendrift:737: No elements hit seafloor.
45:34 DEBUG   opendrift:1699: No elements to deactivate
45:34 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:34 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:34 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:34 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:34 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0]
45:34 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3]
45:34 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 224.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  3.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:34 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:34 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:34 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:34 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:34 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.012326360548728113
45:34 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:34 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:34 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:34 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:34 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:34 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:34 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:34 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:34 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:34 INFO    opendrift.models.chemicaldrift:1882: partitioning: [238, 0, 9, 253, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:34 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:34 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:34 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:34 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:34 DEBUG   opendrift:2059: ======================================================================
45:34 INFO    opendrift:2060: 2025-04-13 01:14:52.046155 - step 30 of 96 - 500 active elements (0 deactivated)
45:34 DEBUG   opendrift:2066: 0 elements scheduled.
45:34 DEBUG   opendrift:2068: ======================================================================
45:34 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.727786308260534
45:34 DEBUG   opendrift:2084:                10.51296588553951 <- longitude -> 10.848720158092343
45:34 DEBUG   opendrift:2089:                -27.308171755190266   <- z ->   -0.02196025751956593
45:34 DEBUG   opendrift:2090: ---------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 01:00:00 (before)
                2025-04-13 02:00:00 (after)
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:36 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:36 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 52x39x7) for time after (2025-04-13 02:00:00)
45:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 01:00:00) in space  (linearNDFast)
45:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 02:00:00) in space  (linearNDFast)
45:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 01:00:00, weight 0.75) and
                      after (2025-04-13 02:00:00, weight 0.25) in time
45:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:36 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.15129086999072 degrees.
45:36 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.15129086999072 degrees.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:36 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:36 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:36 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:36 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:36 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:36 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:36 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.144229 (min) 0.504611 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.130115 (min) 0.340173 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.295165 (min) -0.259314 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.75908 (min) -2.97569 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.62209 (min) 3.04051 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 31.6345 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.35673 (min) 8.21354 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.3555 (min) 33.8603 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -5.73675e-05 (min) 0.000275711 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:36 DEBUG   opendrift:698: No elements hit coastline.
45:36 DEBUG   opendrift:737: No elements hit seafloor.
45:36 DEBUG   opendrift:1699: No elements to deactivate
45:36 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:36 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:36 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:36 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 7
45:36 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0]
45:36 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3]
45:36 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 231.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  3.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:36 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:36 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:36 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:36 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:36 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.013168345576380124
45:36 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:36 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:36 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:534: 7 elements reached seafloor, interacting with bottom
45:36 DEBUG   opendrift:742: Lifting 7 elements to seafloor.
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:36 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:36 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:36 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:36 INFO    opendrift.models.chemicaldrift:1882: partitioning: [231, 0, 9, 260, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:36 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:36 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:36 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:36 DEBUG   opendrift:737: No elements hit seafloor.
45:36 DEBUG   opendrift:2059: ======================================================================
45:36 INFO    opendrift:2060: 2025-04-13 01:44:52.046155 - step 31 of 96 - 500 active elements (0 deactivated)
45:36 DEBUG   opendrift:2066: 0 elements scheduled.
45:36 DEBUG   opendrift:2068: ======================================================================
45:36 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72725340540699
45:36 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.855057342451008
45:36 DEBUG   opendrift:2089:                -27.694716851376256   <- z ->   -0.01753854745507044
45:36 DEBUG   opendrift:2090: ---------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 01:00:00 (before)
                2025-04-13 02:00:00 (after)
45:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 01:00:00) in space  (linearNDFast)
45:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 02:00:00) in space  (linearNDFast)
45:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 01:00:00, weight 0.25) and
                      after (2025-04-13 02:00:00, weight 0.75) in time
45:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:36 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.14495368656962 degrees.
45:36 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.14495368656962 degrees.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:36 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:36 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:36 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:36 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:36 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:36 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:36 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:36 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:36 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:36 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:36 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.138636 (min) 0.506136 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.181898 (min) 0.303958 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.223682 (min) -0.198033 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.24801 (min) -2.707 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.71488 (min) 3.85966 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 32.3338 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3589 (min) 8.19565 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.365 (min) 33.8951 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -4.37723e-05 (min) 0.00029724 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:36 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:36 DEBUG   opendrift:698: No elements hit coastline.
45:36 DEBUG   opendrift:737: No elements hit seafloor.
45:36 DEBUG   opendrift:1699: No elements to deactivate
45:36 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:36 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:36 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:36 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:36 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0 0 0 0]
45:36 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3 3 3 3]
45:36 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 235.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  4.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:36 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:36 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:36 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:36 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:36 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.016096681041641248
45:36 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:36 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:36 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:36 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:36 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:36 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:36 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:36 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:36 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:36 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:36 INFO    opendrift.models.chemicaldrift:1882: partitioning: [228, 0, 9, 263, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:36 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:36 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:36 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:36 DEBUG   opendrift:737: No elements hit seafloor.
45:36 DEBUG   opendrift:2059: ======================================================================
45:36 INFO    opendrift:2060: 2025-04-13 02:14:52.046155 - step 32 of 96 - 500 active elements (0 deactivated)
45:36 DEBUG   opendrift:2066: 0 elements scheduled.
45:36 DEBUG   opendrift:2068: ======================================================================
45:36 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.726356193654446
45:36 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.862539723481602
45:36 DEBUG   opendrift:2089:                -27.520198822021484   <- z ->   -0.08641770004315685
45:36 DEBUG   opendrift:2090: ---------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:36 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:36 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:36 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:36 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 02:00:00 (before)
                2025-04-13 03:00:00 (after)
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:38 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:38 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 52x40x7) for time after (2025-04-13 03:00:00)
45:38 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 02:00:00) in space  (linearNDFast)
45:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:38 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 03:00:00) in space  (linearNDFast)
45:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:38 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 02:00:00, weight 0.75) and
                      after (2025-04-13 03:00:00, weight 0.25) in time
45:38 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:38 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.13747129728778 degrees.
45:38 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.13747129728778 degrees.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:38 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:38 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:38 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:38 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:38 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:38 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:38 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:38 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:38 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:38 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:38 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:38 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:38 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.130889 (min) 0.498553 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.143438 (min) 0.276201 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.189861 (min) -0.154587 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.61273 (min) -2.47647 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.84901 (min) 4.2777 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 32.263 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.36 (min) 8.19256 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.4784 (min) 33.8798 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -3.33312e-05 (min) 0.000282945 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:38 DEBUG   opendrift:698: No elements hit coastline.
45:38 DEBUG   opendrift:737: No elements hit seafloor.
45:38 DEBUG   opendrift:1699: No elements to deactivate
45:38 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:38 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:38 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:38 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:38 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 3 3 0]
45:38 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 0 0 3]
45:38 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 238.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  6.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:38 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:38 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:38 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:38 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:38 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.019271220915942203
45:38 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:38 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:38 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:38 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
45:38 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:38 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:38 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:38 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:38 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:38 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:38 INFO    opendrift.models.chemicaldrift:1882: partitioning: [227, 0, 9, 264, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:38 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:38 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:38 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:38 DEBUG   opendrift:737: No elements hit seafloor.
45:38 DEBUG   opendrift:2059: ======================================================================
45:38 INFO    opendrift:2060: 2025-04-13 02:44:52.046155 - step 33 of 96 - 500 active elements (0 deactivated)
45:38 DEBUG   opendrift:2066: 0 elements scheduled.
45:38 DEBUG   opendrift:2068: ======================================================================
45:38 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72672605288584
45:38 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.867026723935574
45:38 DEBUG   opendrift:2089:                -27.520198822021484   <- z ->   0.0
45:38 DEBUG   opendrift:2090: ---------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:38 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:38 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:38 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 02:00:00 (before)
                2025-04-13 03:00:00 (after)
45:38 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 02:00:00) in space  (linearNDFast)
45:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:38 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 03:00:00) in space  (linearNDFast)
45:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:38 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 02:00:00, weight 0.25) and
                      after (2025-04-13 03:00:00, weight 0.75) in time
45:38 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:38 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.13298429195237 degrees.
45:38 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.13298429195237 degrees.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:38 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:38 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:38 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:38 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:38 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:38 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:38 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:38 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:38 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:38 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:38 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:38 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:38 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:38 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:38 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:38 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:38 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:38 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.120951 (min) 0.486776 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.195595 (min) 0.282789 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.174148 (min) -0.130099 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.80998 (min) -2.30493 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.0504 (min) 4.28745 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 32.0509 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.36 (min) 8.16418 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.4807 (min) 33.6003 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -4.9136e-05 (min) 0.000227713 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:38 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:38 DEBUG   opendrift:698: No elements hit coastline.
45:38 DEBUG   opendrift:737: No elements hit seafloor.
45:39 DEBUG   opendrift:1699: No elements to deactivate
45:39 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:39 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:39 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:39 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:39 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0]
45:39 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3]
45:39 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 242.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  6.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:39 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:39 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:39 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:39 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:39 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.022893438709663427
45:39 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:39 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:39 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:39 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:39 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:39 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:39 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:39 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:39 INFO    opendrift.models.chemicaldrift:1882: partitioning: [223, 0, 9, 268, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:39 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:39 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:39 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:39 DEBUG   opendrift:737: No elements hit seafloor.
45:39 DEBUG   opendrift:2059: ======================================================================
45:39 INFO    opendrift:2060: 2025-04-13 03:14:52.046155 - step 34 of 96 - 500 active elements (0 deactivated)
45:39 DEBUG   opendrift:2066: 0 elements scheduled.
45:39 DEBUG   opendrift:2068: ======================================================================
45:39 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72749488978134
45:39 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.87377419715124
45:39 DEBUG   opendrift:2089:                -28.830018946502243   <- z ->   -0.20714250418821645
45:39 DEBUG   opendrift:2090: ---------------------------------
45:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 03:00:00 (before)
                2025-04-13 04:00:00 (after)
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:41 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:41 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 52x41x7) for time after (2025-04-13 04:00:00)
45:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 03:00:00) in space  (linearNDFast)
45:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 04:00:00) in space  (linearNDFast)
45:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 03:00:00, weight 0.75) and
                      after (2025-04-13 04:00:00, weight 0.25) in time
45:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.12623682967909 degrees.
45:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.12623682967909 degrees.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:41 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:41 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.109638 (min) 0.501736 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.198809 (min) 0.284949 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.176183 (min) -0.127281 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -5.07291 (min) -2.41857 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.5404 (min) 4.39197 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 32.6983 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3601 (min) 8.16712 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.4959 (min) 33.8879 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -7.19458e-05 (min) 0.00020109 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:41 DEBUG   opendrift:698: No elements hit coastline.
45:41 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:41 DEBUG   opendrift:1699: No elements to deactivate
45:41 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:41 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:41 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:41 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 8
45:41 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 0 0]
45:41 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 3 3]
45:41 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 250.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  6.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:41 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:41 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:41 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.028043850409754368
45:41 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:41 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:41 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:534: 8 elements reached seafloor, interacting with bottom
45:41 DEBUG   opendrift:742: Lifting 8 elements to seafloor.
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:41 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:41 INFO    opendrift.models.chemicaldrift:1882: partitioning: [215, 0, 9, 276, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:41 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:41 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:41 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:41 DEBUG   opendrift:737: No elements hit seafloor.
45:41 DEBUG   opendrift:2059: ======================================================================
45:41 INFO    opendrift:2060: 2025-04-13 03:44:52.046155 - step 35 of 96 - 500 active elements (0 deactivated)
45:41 DEBUG   opendrift:2066: 0 elements scheduled.
45:41 DEBUG   opendrift:2068: ======================================================================
45:41 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.729660679630726
45:41 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.879777239845017
45:41 DEBUG   opendrift:2089:                -29.39086151123047   <- z ->   -0.21160776770523373
45:41 DEBUG   opendrift:2090: ---------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 03:00:00 (before)
                2025-04-13 04:00:00 (after)
45:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 03:00:00) in space  (linearNDFast)
45:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 04:00:00) in space  (linearNDFast)
45:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 03:00:00, weight 0.25) and
                      after (2025-04-13 04:00:00, weight 0.75) in time
45:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.12023377965889 degrees.
45:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.12023377965889 degrees.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:41 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:41 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:41 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:41 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.094342 (min) 0.498962 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.190188 (min) 0.327041 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.198107 (min) -0.145524 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -5.35602 (min) -2.73378 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.04329 (min) 4.66858 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 33.7363 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3603 (min) 8.16056 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.5238 (min) 33.6876 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -8.7067e-05 (min) 0.000191678 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:41 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:41 DEBUG   opendrift:698: No elements hit coastline.
45:41 DEBUG   opendrift:742: Lifting 13 elements to seafloor.
45:41 DEBUG   opendrift:1699: No elements to deactivate
45:41 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:41 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:41 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:41 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:41 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0]
45:41 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3]
45:41 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 256.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  32.   0.]
 [  6.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:41 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:41 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:41 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03439080129238219
45:41 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:41 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:41 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:534: 6 elements reached seafloor, interacting with bottom
45:41 DEBUG   opendrift:742: Lifting 6 elements to seafloor.
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
45:41 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:41 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:41 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:41 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:41 INFO    opendrift.models.chemicaldrift:1882: partitioning: [209, 0, 8, 283, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:41 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:41 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:41 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:41 DEBUG   opendrift:737: No elements hit seafloor.
45:41 DEBUG   opendrift:2059: ======================================================================
45:41 INFO    opendrift:2060: 2025-04-13 04:14:52.046155 - step 36 of 96 - 500 active elements (0 deactivated)
45:41 DEBUG   opendrift:2066: 0 elements scheduled.
45:41 DEBUG   opendrift:2068: ======================================================================
45:41 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.72997739615586
45:41 DEBUG   opendrift:2084:                10.512965885539511 <- longitude -> 10.884923891251708
45:41 DEBUG   opendrift:2089:                -29.370935440063477   <- z ->   -0.046249910562568775
45:41 DEBUG   opendrift:2090: ---------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 04:00:00 (before)
                2025-04-13 05:00:00 (after)
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:43 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:43 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 53x41x7) for time after (2025-04-13 05:00:00)
45:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 04:00:00) in space  (linearNDFast)
45:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:43 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 05:00:00) in space  (linearNDFast)
45:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:43 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 04:00:00, weight 0.75) and
                      after (2025-04-13 05:00:00, weight 0.25) in time
45:43 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.115087132159644 degrees.
45:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.115087132159644 degrees.
45:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:43 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:43 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:43 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:43 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:43 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:43 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:43 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:43 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:43 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:43 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:43 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:43 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:43 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:43 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:43 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:43 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:43 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:43 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.102348 (min) 0.516573 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.00789031 (min) 0.370767 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.231131 (min) -0.177743 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -5.50354 (min) -3.34186 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.65407 (min) 5.13528 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 33.8092 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.36278 (min) 8.14683 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.5567 (min) 33.6848 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000141659 (min) 0.000162771 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:43 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:43 DEBUG   opendrift:698: No elements hit coastline.
45:43 DEBUG   opendrift:742: Lifting 22 elements to seafloor.
45:43 DEBUG   opendrift:1699: No elements to deactivate
45:43 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:43 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:43 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:43 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 6
45:43 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 3 0 0 0]
45:43 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 0 3 3 3]
45:43 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 261.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  33.   0.]
 [  7.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:43 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:43 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:43 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:43 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:43 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04075049359673549
45:43 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:43 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:43 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:43 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:534: 5 elements reached seafloor, interacting with bottom
45:43 DEBUG   opendrift:742: Lifting 5 elements to seafloor.
45:43 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:43 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:43 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:43 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:43 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:43 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:43 INFO    opendrift.models.chemicaldrift:1882: partitioning: [205, 0, 8, 287, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:43 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:43 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:43 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:43 DEBUG   opendrift:737: No elements hit seafloor.
45:43 DEBUG   opendrift:2059: ======================================================================
45:43 INFO    opendrift:2060: 2025-04-13 04:44:52.046155 - step 37 of 96 - 500 active elements (0 deactivated)
45:43 DEBUG   opendrift:2066: 0 elements scheduled.
45:43 DEBUG   opendrift:2068: ======================================================================
45:43 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.73460089525087
45:43 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 10.89027034044236
45:43 DEBUG   opendrift:2089:                -29.832219453764427   <- z ->   -0.09711748244435636
45:43 DEBUG   opendrift:2090: ---------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:43 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:43 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:43 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:43 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 04:00:00 (before)
                2025-04-13 05:00:00 (after)
45:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 04:00:00) in space  (linearNDFast)
45:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:43 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 05:00:00) in space  (linearNDFast)
45:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:43 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 04:00:00, weight 0.25) and
                      after (2025-04-13 05:00:00, weight 0.75) in time
45:43 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.10974067772051 degrees.
45:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.10974067772051 degrees.
45:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:44 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:44 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:44 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:44 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:44 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:44 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:44 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:44 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:44 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:44 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0949333 (min) 0.495619 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.034643 (min) 0.386837 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.275952 (min) -0.224826 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -5.79084 (min) -4.21195 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.93829 (min) 5.87418 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 35.3461 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.36758 (min) 8.16417 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.4676 (min) 33.74 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000192096 (min) 0.000122775 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:44 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:44 DEBUG   opendrift:698: No elements hit coastline.
45:44 DEBUG   opendrift:742: Lifting 31 elements to seafloor.
45:44 DEBUG   opendrift:1699: No elements to deactivate
45:44 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:44 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:44 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:44 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 8
45:44 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0 0 3 0]
45:44 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3 3 0 3]
45:44 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 268.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  33.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:44 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:44 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:44 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.047125218589841096
45:44 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:44 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:44 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:44 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:534: 7 elements reached seafloor, interacting with bottom
45:44 DEBUG   opendrift:742: Lifting 7 elements to seafloor.
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:44 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:44 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:44 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:44 INFO    opendrift.models.chemicaldrift:1882: partitioning: [199, 0, 8, 293, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:44 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:44 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:44 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:44 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:44 DEBUG   opendrift:2059: ======================================================================
45:44 INFO    opendrift:2060: 2025-04-13 05:14:52.046155 - step 38 of 96 - 500 active elements (0 deactivated)
45:44 DEBUG   opendrift:2066: 0 elements scheduled.
45:44 DEBUG   opendrift:2068: ======================================================================
45:44 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.73631736353953
45:44 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 10.896180944942333
45:44 DEBUG   opendrift:2089:                -29.296558380126953   <- z ->   -0.10074333927095791
45:44 DEBUG   opendrift:2090: ---------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 05:00:00 (before)
                2025-04-13 06:00:00 (after)
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:46 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:46 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 54x41x7) for time after (2025-04-13 06:00:00)
45:46 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 05:00:00) in space  (linearNDFast)
45:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:46 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 06:00:00) in space  (linearNDFast)
45:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:46 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 05:00:00, weight 0.75) and
                      after (2025-04-13 06:00:00, weight 0.25) in time
45:46 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.1038300653931 degrees.
45:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.1038300653931 degrees.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:46 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:46 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0897878 (min) 0.474415 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.102805 (min) 0.442922 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.323884 (min) -0.276974 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.46597 (min) -5.24356 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.0898 (min) 6.32282 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 35.7428 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.37079 (min) 8.11855 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.6399 (min) 33.6732 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000186085 (min) 0.000153786 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:46 DEBUG   opendrift:698: No elements hit coastline.
45:46 DEBUG   opendrift:742: Lifting 46 elements to seafloor.
45:46 DEBUG   opendrift:1699: No elements to deactivate
45:46 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:46 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:46 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:46 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
45:46 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
45:46 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
45:46 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 270.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  33.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:46 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:46 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:46 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.053228409022750084
45:46 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:46 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:46 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:46 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:46 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:46 INFO    opendrift.models.chemicaldrift:1882: partitioning: [197, 0, 8, 295, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:46 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:46 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:46 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:46 DEBUG   opendrift:737: No elements hit seafloor.
45:46 DEBUG   opendrift:2059: ======================================================================
45:46 INFO    opendrift:2060: 2025-04-13 05:44:52.046155 - step 39 of 96 - 500 active elements (0 deactivated)
45:46 DEBUG   opendrift:2066: 0 elements scheduled.
45:46 DEBUG   opendrift:2068: ======================================================================
45:46 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.73913568871844
45:46 DEBUG   opendrift:2084:                10.5129658855395 <- longitude -> 10.899623946123528
45:46 DEBUG   opendrift:2089:                -30.01276151526801   <- z ->   0.0
45:46 DEBUG   opendrift:2090: ---------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 05:00:00 (before)
                2025-04-13 06:00:00 (after)
45:46 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 05:00:00) in space  (linearNDFast)
45:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:46 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 06:00:00) in space  (linearNDFast)
45:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:46 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 05:00:00, weight 0.25) and
                      after (2025-04-13 06:00:00, weight 0.75) in time
45:46 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.10038705928307 degrees.
45:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.10038705928307 degrees.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:46 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:46 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:46 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:46 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0913027 (min) 0.481714 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0605413 (min) 0.473861 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.374204 (min) -0.332857 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.91127 (min) -6.25363 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.457 (min) 6.49457 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 36.47 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.37237 (min) 8.10711 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.6982 (min) 33.6637 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000178315 (min) 0.00010851 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:46 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:46 DEBUG   opendrift:698: No elements hit coastline.
45:46 DEBUG   opendrift:742: Lifting 51 elements to seafloor.
45:46 DEBUG   opendrift:1699: No elements to deactivate
45:46 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:46 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:46 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:46 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:46 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0]
45:46 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3]
45:46 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 274.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  33.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:46 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:46 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:46 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.05875707042698219
45:46 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:46 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:46 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:534: 5 elements reached seafloor, interacting with bottom
45:46 DEBUG   opendrift:742: Lifting 5 elements to seafloor.
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:46 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:46 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:46 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:46 INFO    opendrift.models.chemicaldrift:1882: partitioning: [193, 0, 7, 300, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:46 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:46 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:46 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:46 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:46 DEBUG   opendrift:2059: ======================================================================
45:46 INFO    opendrift:2060: 2025-04-13 06:14:52.046155 - step 40 of 96 - 500 active elements (0 deactivated)
45:46 DEBUG   opendrift:2066: 0 elements scheduled.
45:46 DEBUG   opendrift:2068: ======================================================================
45:46 DEBUG   opendrift:2079:                57.5603230575897 <- latitude  -> 57.74169334395556
45:46 DEBUG   opendrift:2084:                10.5129658855395 <- longitude -> 10.900333869797956
45:46 DEBUG   opendrift:2089:                -31.054664611816406   <- z ->   -0.20021188621734098
45:46 DEBUG   opendrift:2090: ---------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 06:00:00 (before)
                2025-04-13 07:00:00 (after)
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:49 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:49 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 55x41x7) for time after (2025-04-13 07:00:00)
45:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 06:00:00) in space  (linearNDFast)
45:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 07:00:00) in space  (linearNDFast)
45:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 06:00:00, weight 0.75) and
                      after (2025-04-13 07:00:00, weight 0.25) in time
45:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:49 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09967713976491 degrees.
45:49 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09967713976491 degrees.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:49 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:49 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.114836 (min) 0.470269 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.122502 (min) 0.487263 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.421317 (min) -0.383624 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.24018 (min) -6.55958 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 5.06564 (min) 6.64318 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 37.1189 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.37489 (min) 8.1136 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.6354 (min) 33.6996 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000196787 (min) 0.000145756 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:49 DEBUG   opendrift:698: No elements hit coastline.
45:49 DEBUG   opendrift:742: Lifting 58 elements to seafloor.
45:49 DEBUG   opendrift:1699: No elements to deactivate
45:49 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:49 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:49 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:49 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 5
45:49 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0 0]
45:49 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3 3]
45:49 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 279.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:49 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:49 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:49 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06381966905348552
45:49 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:49 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:49 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:534: 5 elements reached seafloor, interacting with bottom
45:49 DEBUG   opendrift:742: Lifting 5 elements to seafloor.
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 11 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:49 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:49 INFO    opendrift.models.chemicaldrift:1882: partitioning: [188, 0, 7, 305, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:49 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:49 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:49 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:49 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:49 DEBUG   opendrift:2059: ======================================================================
45:49 INFO    opendrift:2060: 2025-04-13 06:44:52.046155 - step 41 of 96 - 500 active elements (0 deactivated)
45:49 DEBUG   opendrift:2066: 0 elements scheduled.
45:49 DEBUG   opendrift:2068: ======================================================================
45:49 DEBUG   opendrift:2079:                57.56032305758969 <- latitude  -> 57.74731933139603
45:49 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.901111542432323
45:49 DEBUG   opendrift:2089:                -31.420133590698242   <- z ->   -0.04660334554290202
45:49 DEBUG   opendrift:2090: ---------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 06:00:00 (before)
                2025-04-13 07:00:00 (after)
45:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 06:00:00) in space  (linearNDFast)
45:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 07:00:00) in space  (linearNDFast)
45:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 06:00:00, weight 0.25) and
                      after (2025-04-13 07:00:00, weight 0.75) in time
45:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:49 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09889946468461 degrees.
45:49 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09889946468461 degrees.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:49 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:49 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:49 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:49 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.104897 (min) 0.453002 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.113208 (min) 0.599497 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.465947 (min) -0.429074 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.25246 (min) -6.71311 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 5.86748 (min) 6.83887 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 38.8954 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.37556 (min) 8.07388 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.755 (min) 33.7161 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000211392 (min) 9.78319e-05 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:49 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:49 DEBUG   opendrift:698: No elements hit coastline.
45:49 DEBUG   opendrift:742: Lifting 64 elements to seafloor.
45:49 DEBUG   opendrift:1699: No elements to deactivate
45:49 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:49 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:49 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:49 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
45:49 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
45:49 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
45:49 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 281.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:49 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:49 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:49 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0688060097943501
45:49 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:49 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:49 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
45:49 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:49 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:49 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:49 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:49 INFO    opendrift.models.chemicaldrift:1882: partitioning: [186, 0, 7, 307, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:49 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:49 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:49 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:49 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:49 DEBUG   opendrift:2059: ======================================================================
45:49 INFO    opendrift:2060: 2025-04-13 07:14:52.046155 - step 42 of 96 - 500 active elements (0 deactivated)
45:49 DEBUG   opendrift:2066: 0 elements scheduled.
45:49 DEBUG   opendrift:2068: ======================================================================
45:49 DEBUG   opendrift:2079:                57.56032305758969 <- latitude  -> 57.74977630795574
45:49 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.901512290593203
45:49 DEBUG   opendrift:2089:                -33.134891510009766   <- z ->   -0.7005519131177729
45:49 DEBUG   opendrift:2090: ---------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 07:00:00 (before)
                2025-04-13 08:00:00 (after)
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:51 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:51 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 56x41x7) for time after (2025-04-13 08:00:00)
45:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 07:00:00) in space  (linearNDFast)
45:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 08:00:00) in space  (linearNDFast)
45:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 07:00:00, weight 0.75) and
                      after (2025-04-13 08:00:00, weight 0.25) in time
45:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09849870920033 degrees.
45:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.09849870920033 degrees.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:51 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:51 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0950692 (min) 0.448599 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.10167 (min) 0.621997 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.506496 (min) -0.469345 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.13503 (min) -6.68099 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.62693 (min) 7.31448 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 39.6173 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.37804 (min) 8.0726 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.7917 (min) 33.6746 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000222785 (min) 0.000127121 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:51 DEBUG   opendrift:698: No elements hit coastline.
45:51 DEBUG   opendrift:742: Lifting 69 elements to seafloor.
45:51 DEBUG   opendrift:1699: No elements to deactivate
45:51 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:51 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:51 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:51 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
45:51 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0 0]
45:51 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3 3]
45:51 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 285.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  8.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
45:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:51 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
45:51 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:51 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0736528197872418
45:51 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:51 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:51 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:534: 4 elements reached seafloor, interacting with bottom
45:51 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:51 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:51 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:51 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:51 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:51 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:51 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:51 DEBUG   opendrift:2059: ======================================================================
45:51 INFO    opendrift:2060: 2025-04-13 07:44:52.046155 - step 43 of 96 - 500 active elements (0 deactivated)
45:51 DEBUG   opendrift:2066: 0 elements scheduled.
45:51 DEBUG   opendrift:2068: ======================================================================
45:51 DEBUG   opendrift:2079:                57.560323057589684 <- latitude  -> 57.75638584869016
45:51 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.901788696534936
45:51 DEBUG   opendrift:2089:                -33.18830871582031   <- z ->   -0.2125379180986695
45:51 DEBUG   opendrift:2090: ---------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 07:00:00 (before)
                2025-04-13 08:00:00 (after)
45:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 07:00:00) in space  (linearNDFast)
45:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 08:00:00) in space  (linearNDFast)
45:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 07:00:00, weight 0.25) and
                      after (2025-04-13 08:00:00, weight 0.75) in time
45:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0982223141759 degrees.
45:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0982223141759 degrees.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:51 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:51 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:51 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:51 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.121567 (min) 0.43216 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0856012 (min) 0.555943 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.542949 (min) -0.50315 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.91694 (min) -6.35435 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.33523 (min) 7.91848 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 40.5119 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.3824 (min) 8.02958 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.8329 (min) 33.774 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000230907 (min) 0.000173644 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:51 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:51 DEBUG   opendrift:698: No elements hit coastline.
45:51 DEBUG   opendrift:742: Lifting 81 elements to seafloor.
45:51 DEBUG   opendrift:1699: No elements to deactivate
45:51 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:51 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:51 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:51 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:51 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:51 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07811697759527976
45:51 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:51 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:51 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 10 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:51 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:51 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:51 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:51 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:51 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:51 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:51 DEBUG   opendrift:737: No elements hit seafloor.
45:51 DEBUG   opendrift:2059: ======================================================================
45:51 INFO    opendrift:2060: 2025-04-13 08:14:52.046155 - step 44 of 96 - 500 active elements (0 deactivated)
45:51 DEBUG   opendrift:2066: 0 elements scheduled.
45:51 DEBUG   opendrift:2068: ======================================================================
45:51 DEBUG   opendrift:2079:                57.560323057589684 <- latitude  -> 57.75996602642327
45:51 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.9020398638854
45:51 DEBUG   opendrift:2089:                -32.458136081040074   <- z ->   -0.14257146213127847
45:51 DEBUG   opendrift:2090: ---------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 08:00:00 (before)
                2025-04-13 09:00:00 (after)
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:54 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:54 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 57x41x7) for time after (2025-04-13 09:00:00)
45:54 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 08:00:00) in space  (linearNDFast)
45:54 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:54 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 09:00:00) in space  (linearNDFast)
45:54 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:54 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 08:00:00, weight 0.75) and
                      after (2025-04-13 09:00:00, weight 0.25) in time
45:54 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:54 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.097971134244695 degrees.
45:54 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.097971134244695 degrees.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:54 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:54 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:54 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:54 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:54 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:54 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:54 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.115781 (min) 0.458308 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0652893 (min) 0.605558 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.576215 (min) -0.534909 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.84206 (min) -6.18494 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.528 (min) 8.30686 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 41.8844 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.38538 (min) 8.00956 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.8788 (min) 33.772 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000235815 (min) 0.000198861 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:54 DEBUG   opendrift:698: No elements hit coastline.
45:54 DEBUG   opendrift:742: Lifting 311 elements to seafloor.
45:54 DEBUG   opendrift:1699: No elements to deactivate
45:54 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:54 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:54 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:54 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:54 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:54 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08267186110448181
45:54 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:54 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:54 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 9 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:54 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:54 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:54 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:54 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:54 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:54 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:54 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:54 DEBUG   opendrift:737: No elements hit seafloor.
45:54 DEBUG   opendrift:2059: ======================================================================
45:54 INFO    opendrift:2060: 2025-04-13 08:44:52.046155 - step 45 of 96 - 500 active elements (0 deactivated)
45:54 DEBUG   opendrift:2066: 0 elements scheduled.
45:54 DEBUG   opendrift:2068: ======================================================================
45:54 DEBUG   opendrift:2079:                57.56032305758968 <- latitude  -> 57.76340621831279
45:54 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.911448328800933
45:54 DEBUG   opendrift:2089:                -34.31779886385136   <- z ->   -0.2929511652006245
45:54 DEBUG   opendrift:2090: ---------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 08:00:00 (before)
                2025-04-13 09:00:00 (after)
45:54 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 08:00:00) in space  (linearNDFast)
45:54 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:54 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 09:00:00) in space  (linearNDFast)
45:54 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:54 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 08:00:00, weight 0.25) and
                      after (2025-04-13 09:00:00, weight 0.75) in time
45:54 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:54 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08856265930087 degrees.
45:54 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08856265930087 degrees.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:54 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:54 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:54 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:54 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:54 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:54 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:54 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:54 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:54 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:54 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:54 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.101055 (min) 0.46785 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0454771 (min) 0.614184 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.608279 (min) -0.564882 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.97761 (min) -6.17556 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.41566 (min) 8.48648 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 43.1328 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.38556 (min) 7.99476 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.9283 (min) 33.7738 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000245375 (min) 0.000253959 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:54 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:54 DEBUG   opendrift:698: No elements hit coastline.
45:54 DEBUG   opendrift:742: Lifting 311 elements to seafloor.
45:54 DEBUG   opendrift:1699: No elements to deactivate
45:54 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:54 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:54 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:54 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:54 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:54 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08583456511944926
45:54 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:54 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:54 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:54 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:54 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:54 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:54 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:54 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:54 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:54 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:54 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:54 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:54 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:54 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:54 DEBUG   opendrift:2059: ======================================================================
45:54 INFO    opendrift:2060: 2025-04-13 09:14:52.046155 - step 46 of 96 - 500 active elements (0 deactivated)
45:54 DEBUG   opendrift:2066: 0 elements scheduled.
45:54 DEBUG   opendrift:2068: ======================================================================
45:54 DEBUG   opendrift:2079:                57.56032305758968 <- latitude  -> 57.76804601968332
45:54 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.91332445812069
45:54 DEBUG   opendrift:2089:                -38.72892761230469   <- z ->   -0.23967069743035696
45:54 DEBUG   opendrift:2090: ---------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:54 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:54 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:54 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:54 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 09:00:00 (before)
                2025-04-13 10:00:00 (after)
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:56 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:56 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 58x41x7) for time after (2025-04-13 10:00:00)
45:56 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 09:00:00) in space  (linearNDFast)
45:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:56 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 10:00:00) in space  (linearNDFast)
45:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:56 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 09:00:00, weight 0.75) and
                      after (2025-04-13 10:00:00, weight 0.25) in time
45:56 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08668654071348 degrees.
45:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08668654071348 degrees.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:56 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:56 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0999577 (min) 0.459976 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.0269157 (min) 0.606833 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.632029 (min) -0.588735 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.68782 (min) -6.79275 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.23682 (min) 8.42403 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 46.247 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.38804 (min) 7.97211 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 26.9839 (min) 34.0518 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000288117 (min) 0.000340272 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:56 DEBUG   opendrift:698: No elements hit coastline.
45:56 DEBUG   opendrift:742: Lifting 311 elements to seafloor.
45:56 DEBUG   opendrift:1699: No elements to deactivate
45:56 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:56 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:56 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:56 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:56 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:56 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0913056306372781
45:56 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:56 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:56 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 8 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:56 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:56 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:56 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:56 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:56 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:56 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:56 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:56 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:56 DEBUG   opendrift:2059: ======================================================================
45:56 INFO    opendrift:2060: 2025-04-13 09:44:52.046155 - step 47 of 96 - 500 active elements (0 deactivated)
45:56 DEBUG   opendrift:2066: 0 elements scheduled.
45:56 DEBUG   opendrift:2068: ======================================================================
45:56 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.77415342501797
45:56 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.914948494457668
45:56 DEBUG   opendrift:2089:                -38.60681451088115   <- z ->   -0.10982474644573958
45:56 DEBUG   opendrift:2090: ---------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:56 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 09:00:00 (before)
                2025-04-13 10:00:00 (after)
45:56 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 09:00:00) in space  (linearNDFast)
45:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:56 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 10:00:00) in space  (linearNDFast)
45:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:56 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 09:00:00, weight 0.25) and
                      after (2025-04-13 10:00:00, weight 0.75) in time
45:56 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08506251331245 degrees.
45:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.08506251331245 degrees.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:56 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:56 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:56 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:56 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:56 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0968577 (min) 0.471778 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: 0.00282865 (min) 0.721663 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.646703 (min) -0.606308 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -8.95233 (min) -8.03895 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.97166 (min) 8.23116 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 48.6579 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.39286 (min) 7.97505 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.0472 (min) 34.0683 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000351413 (min) 0.000498355 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:56 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:56 DEBUG   opendrift:698: No elements hit coastline.
45:56 DEBUG   opendrift:742: Lifting 311 elements to seafloor.
45:56 DEBUG   opendrift:1699: No elements to deactivate
45:56 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:56 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:56 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:56 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:56 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:56 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.10156010618918843
45:56 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:56 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:56 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:56 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:57 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:57 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:57 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:57 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:57 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:57 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:57 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:57 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:57 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:57 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:57 DEBUG   opendrift:2059: ======================================================================
45:57 INFO    opendrift:2060: 2025-04-13 10:14:52.046155 - step 48 of 96 - 500 active elements (0 deactivated)
45:57 DEBUG   opendrift:2066: 0 elements scheduled.
45:57 DEBUG   opendrift:2068: ======================================================================
45:57 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.77639932910381
45:57 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.923039932984276
45:57 DEBUG   opendrift:2089:                -38.742912657633255   <- z ->   -0.5658467804249327
45:57 DEBUG   opendrift:2090: ---------------------------------
45:57 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:57 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:57 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:57 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:57 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:57 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:57 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:57 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 10:00:00 (before)
                2025-04-13 11:00:00 (after)
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
45:59 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
45:59 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 60x41x7) for time after (2025-04-13 11:00:00)
45:59 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 10:00:00) in space  (linearNDFast)
45:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:59 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 11:00:00) in space  (linearNDFast)
45:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:59 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 10:00:00, weight 0.75) and
                      after (2025-04-13 11:00:00, weight 0.25) in time
45:59 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:59 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.07697106005206 degrees.
45:59 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.07697106005206 degrees.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:59 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:59 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:59 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:59 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:59 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:59 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:59 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0928212 (min) 0.473694 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0315048 (min) 0.6704 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.651219 (min) -0.61052 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -9.41333 (min) -8.03032 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.75998 (min) 8.27443 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 49.607 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.39646 (min) 7.95331 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.1147 (min) 34.0968 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000350959 (min) 0.000721559 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:59 DEBUG   opendrift:698: No elements hit coastline.
45:59 DEBUG   opendrift:742: Lifting 311 elements to seafloor.
45:59 DEBUG   opendrift:1699: No elements to deactivate
45:59 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:59 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:59 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:59 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:59 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:59 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.1080936064550177
45:59 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:59 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:59 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 6 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:59 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:59 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:59 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:59 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:59 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:59 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:59 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:59 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
45:59 DEBUG   opendrift:2059: ======================================================================
45:59 INFO    opendrift:2060: 2025-04-13 10:44:52.046155 - step 49 of 96 - 500 active elements (0 deactivated)
45:59 DEBUG   opendrift:2066: 0 elements scheduled.
45:59 DEBUG   opendrift:2068: ======================================================================
45:59 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.78210465169705
45:59 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.927377931850357
45:59 DEBUG   opendrift:2089:                -39.72684424521487   <- z ->   -0.42507283631194515
45:59 DEBUG   opendrift:2090: ---------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 10:00:00 (before)
                2025-04-13 11:00:00 (after)
45:59 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 10:00:00) in space  (linearNDFast)
45:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:59 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 11:00:00) in space  (linearNDFast)
45:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
45:59 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 10:00:00, weight 0.25) and
                      after (2025-04-13 11:00:00, weight 0.75) in time
45:59 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
45:59 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.07263306711818 degrees.
45:59 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.07263306711818 degrees.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:59 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
45:59 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
45:59 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
45:59 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
45:59 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
45:59 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
45:59 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
45:59 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
45:59 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
45:59 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
45:59 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0824499 (min) 0.495173 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0638555 (min) 0.646029 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.651219 (min) -0.60048 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -9.11221 (min) -7.34395 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.5644 (min) 8.50125 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 51.8953 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.39881 (min) 7.94015 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.1866 (min) 34.174 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000387443 (min) 0.00112394 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
45:59 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
45:59 DEBUG   opendrift:698: No elements hit coastline.
45:59 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
45:59 DEBUG   opendrift:1699: No elements to deactivate
45:59 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
45:59 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
45:59 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
45:59 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
45:59 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
45:59 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.10892745819081599
45:59 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
45:59 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
45:59 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 5 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 7 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
45:59 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
45:59 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
45:59 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
45:59 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
45:59 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
45:59 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
45:59 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
45:59 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
45:59 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
45:59 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
45:59 DEBUG   opendrift:2059: ======================================================================
45:59 INFO    opendrift:2060: 2025-04-13 11:14:52.046155 - step 50 of 96 - 500 active elements (0 deactivated)
45:59 DEBUG   opendrift:2066: 0 elements scheduled.
45:59 DEBUG   opendrift:2068: ======================================================================
45:59 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.785304323124606
45:59 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.932559088695697
45:59 DEBUG   opendrift:2089:                -38.353225557956215   <- z ->   -0.19791192902847143
45:59 DEBUG   opendrift:2090: ---------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
45:59 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
45:59 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
45:59 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
45:59 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
45:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 11:00:00 (before)
                2025-04-13 12:00:00 (after)
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:02 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:02 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 62x41x7) for time after (2025-04-13 12:00:00)
46:02 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 11:00:00) in space  (linearNDFast)
46:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:02 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 12:00:00) in space  (linearNDFast)
46:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:02 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 11:00:00, weight 0.75) and
                      after (2025-04-13 12:00:00, weight 0.25) in time
46:02 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:02 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0674518964428 degrees.
46:02 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0674518964428 degrees.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:02 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:02 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:02 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:02 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:02 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:02 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:02 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0844126 (min) 0.509923 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0966934 (min) 0.585984 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.631703 (min) -0.573647 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -8.71121 (min) -6.75993 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 5.76338 (min) 8.25122 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 53.1888 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.40019 (min) 7.92236 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.2471 (min) 34.2309 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000395427 (min) 0.00128755 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:02 DEBUG   opendrift:698: No elements hit coastline.
46:02 DEBUG   opendrift:737: No elements hit seafloor.
46:02 DEBUG   opendrift:1699: No elements to deactivate
46:02 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:02 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:02 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:02 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:02 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:02 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0998925298140679
46:02 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:02 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:02 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:02 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:02 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:02 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:02 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:02 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:02 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:02 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:02 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:02 DEBUG   opendrift:2059: ======================================================================
46:02 INFO    opendrift:2060: 2025-04-13 11:44:52.046155 - step 51 of 96 - 500 active elements (0 deactivated)
46:02 DEBUG   opendrift:2066: 0 elements scheduled.
46:02 DEBUG   opendrift:2068: ======================================================================
46:02 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.786195509493226
46:02 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.933699110050753
46:02 DEBUG   opendrift:2089:                -38.338172476916654   <- z ->   -0.3156300962796207
46:02 DEBUG   opendrift:2090: ---------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 11:00:00 (before)
                2025-04-13 12:00:00 (after)
46:02 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 11:00:00) in space  (linearNDFast)
46:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:02 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 12:00:00) in space  (linearNDFast)
46:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:02 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 11:00:00, weight 0.25) and
                      after (2025-04-13 12:00:00, weight 0.75) in time
46:02 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:02 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.066311877557666 degrees.
46:02 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.066311877557666 degrees.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:02 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:02 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:02 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:02 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:02 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:02 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:02 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:02 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:02 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:02 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:02 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0922065 (min) 0.564733 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.136859 (min) 0.642277 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.592322 (min) -0.529573 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -8.2785 (min) -6.27792 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 5.11598 (min) 7.76231 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 54.152 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.40057 (min) 7.93207 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.2954 (min) 34.2927 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000374404 (min) 0.00140004 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:02 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:02 DEBUG   opendrift:698: No elements hit coastline.
46:02 DEBUG   opendrift:737: No elements hit seafloor.
46:02 DEBUG   opendrift:1699: No elements to deactivate
46:02 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:02 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:02 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:02 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:02 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:02 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0903705324364637
46:02 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:02 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:02 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:02 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:02 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:02 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:02 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:02 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:02 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:02 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:02 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:02 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:02 DEBUG   opendrift:737: No elements hit seafloor.
46:02 DEBUG   opendrift:2059: ======================================================================
46:02 INFO    opendrift:2060: 2025-04-13 12:14:52.046155 - step 52 of 96 - 500 active elements (0 deactivated)
46:02 DEBUG   opendrift:2066: 0 elements scheduled.
46:02 DEBUG   opendrift:2068: ======================================================================
46:02 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.79083999088089
46:02 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 10.943033289714817
46:02 DEBUG   opendrift:2089:                -38.69956600221445   <- z ->   -0.06478417278756621
46:02 DEBUG   opendrift:2090: ---------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:02 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:02 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:02 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:02 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 12:00:00 (before)
                2025-04-13 13:00:00 (after)
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:04 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:04 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 64x41x7) for time after (2025-04-13 13:00:00)
46:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 12:00:00) in space  (linearNDFast)
46:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 13:00:00) in space  (linearNDFast)
46:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 12:00:00, weight 0.75) and
                      after (2025-04-13 13:00:00, weight 0.25) in time
46:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:04 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.05697769423581 degrees.
46:04 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.05697769423581 degrees.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:04 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:04 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:04 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:04 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:04 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:04 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:04 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.1035 (min) 0.609818 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.18614 (min) 0.542343 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.536268 (min) -0.47311 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.91368 (min) -6.18261 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 5.28611 (min) 7.68971 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 58.9267 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.40305 (min) 7.94525 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.3398 (min) 34.2902 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000311734 (min) 0.00137523 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:04 DEBUG   opendrift:698: No elements hit coastline.
46:04 DEBUG   opendrift:737: No elements hit seafloor.
46:04 DEBUG   opendrift:1699: No elements to deactivate
46:04 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:04 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:04 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:04 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:04 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:04 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08585823330765861
46:04 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:04 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:04 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:04 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:04 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:04 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:04 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:04 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:04 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:04 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:04 DEBUG   opendrift:737: No elements hit seafloor.
46:04 DEBUG   opendrift:2059: ======================================================================
46:04 INFO    opendrift:2060: 2025-04-13 12:44:52.046155 - step 53 of 96 - 500 active elements (0 deactivated)
46:04 DEBUG   opendrift:2066: 0 elements scheduled.
46:04 DEBUG   opendrift:2068: ======================================================================
46:04 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.79750560728304
46:04 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 10.956509232668363
46:04 DEBUG   opendrift:2089:                -37.525296343539566   <- z ->   0.0
46:04 DEBUG   opendrift:2090: ---------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 12:00:00 (before)
                2025-04-13 13:00:00 (after)
46:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 12:00:00) in space  (linearNDFast)
46:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 13:00:00) in space  (linearNDFast)
46:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 12:00:00, weight 0.25) and
                      after (2025-04-13 13:00:00, weight 0.75) in time
46:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:04 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.04350175116112 degrees.
46:04 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.04350175116112 degrees.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:04 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:04 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:04 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:04 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:04 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:04 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:04 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:04 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:04 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:04 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:04 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.116673 (min) 0.637309 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.272527 (min) 0.616414 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.463469 (min) -0.404686 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.58414 (min) -6.50448 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.10374 (min) 7.7945 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 61.6832 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.40767 (min) 7.93912 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.38 (min) 34.3813 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000295078 (min) 0.00150171 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:04 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:04 DEBUG   opendrift:698: No elements hit coastline.
46:04 DEBUG   opendrift:737: No elements hit seafloor.
46:04 DEBUG   opendrift:1699: No elements to deactivate
46:04 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:04 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:04 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:04 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:04 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3]
46:04 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0]
46:04 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 285.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  9.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:04 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:04 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:04 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:04 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:04 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08414356062724083
46:04 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:04 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:04 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:04 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:04 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:04 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:04 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:04 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:04 INFO    opendrift.models.chemicaldrift:1882: partitioning: [183, 0, 7, 310, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:04 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:04 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:04 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:04 DEBUG   opendrift:737: No elements hit seafloor.
46:04 DEBUG   opendrift:2059: ======================================================================
46:04 INFO    opendrift:2060: 2025-04-13 13:14:52.046155 - step 54 of 96 - 500 active elements (0 deactivated)
46:04 DEBUG   opendrift:2066: 0 elements scheduled.
46:04 DEBUG   opendrift:2068: ======================================================================
46:04 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.807466457441485
46:04 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 10.964929767881381
46:04 DEBUG   opendrift:2089:                -37.13101385996802   <- z ->   0.0
46:04 DEBUG   opendrift:2090: ---------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:04 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:04 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:04 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:04 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 13:00:00 (before)
                2025-04-13 14:00:00 (after)
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:07 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:07 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 64x41x7) for time after (2025-04-13 14:00:00)
46:07 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 13:00:00) in space  (linearNDFast)
46:07 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:07 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 14:00:00) in space  (linearNDFast)
46:07 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:07 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 13:00:00, weight 0.75) and
                      after (2025-04-13 14:00:00, weight 0.25) in time
46:07 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:07 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0350812215884 degrees.
46:07 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.0350812215884 degrees.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:07 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:07 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:07 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:07 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:07 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:07 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:07 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.180184 (min) 0.674582 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.338839 (min) 0.581267 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.387154 (min) -0.337066 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -7.10134 (min) -6.34842 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.79252 (min) 7.87235 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.3994 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.41 (min) 7.97279 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.4256 (min) 34.3721 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000256355 (min) 0.00145463 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:07 DEBUG   opendrift:698: No elements hit coastline.
46:07 DEBUG   opendrift:737: No elements hit seafloor.
46:07 DEBUG   opendrift:1699: No elements to deactivate
46:07 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:07 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:07 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:07 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:07 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:07 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:07 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 286.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  9.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:07 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:07 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:07 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:07 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:07 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0792955785224032
46:07 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:07 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:07 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:07 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:07 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:07 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:07 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:07 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:07 INFO    opendrift.models.chemicaldrift:1882: partitioning: [182, 0, 7, 311, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:07 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:07 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:07 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:07 DEBUG   opendrift:737: No elements hit seafloor.
46:07 DEBUG   opendrift:2059: ======================================================================
46:07 INFO    opendrift:2060: 2025-04-13 13:44:52.046155 - step 55 of 96 - 500 active elements (0 deactivated)
46:07 DEBUG   opendrift:2066: 0 elements scheduled.
46:07 DEBUG   opendrift:2068: ======================================================================
46:07 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.81685908004464
46:07 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.971219796038936
46:07 DEBUG   opendrift:2089:                -38.94533899509537   <- z ->   0.0
46:07 DEBUG   opendrift:2090: ---------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 13:00:00 (before)
                2025-04-13 14:00:00 (after)
46:07 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 13:00:00) in space  (linearNDFast)
46:07 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:07 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 14:00:00) in space  (linearNDFast)
46:07 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:07 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 13:00:00, weight 0.25) and
                      after (2025-04-13 14:00:00, weight 0.75) in time
46:07 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:07 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.028791180665 degrees.
46:07 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.028791180665 degrees.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:07 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:07 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:07 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:07 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:07 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:07 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:07 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:07 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:07 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:07 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:07 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.219807 (min) 0.626151 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.384463 (min) 0.508515 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.308855 (min) -0.268181 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -6.60513 (min) -5.61961 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.35459 (min) 8.32349 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 68.1861 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.41 (min) 7.94846 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.4767 (min) 34.4026 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000209543 (min) 0.00135046 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:07 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:07 DEBUG   opendrift:698: No elements hit coastline.
46:07 DEBUG   opendrift:737: No elements hit seafloor.
46:07 DEBUG   opendrift:1699: No elements to deactivate
46:07 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:07 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:07 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:07 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:07 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:07 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:07 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 287.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [  9.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:07 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:07 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:07 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:07 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:07 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07759911594263934
46:07 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:07 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:07 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:07 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:07 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:07 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:07 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:07 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:07 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:07 INFO    opendrift.models.chemicaldrift:1882: partitioning: [181, 0, 7, 312, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:07 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:07 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:07 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:07 DEBUG   opendrift:737: No elements hit seafloor.
46:07 DEBUG   opendrift:2059: ======================================================================
46:07 INFO    opendrift:2060: 2025-04-13 14:14:52.046155 - step 56 of 96 - 500 active elements (0 deactivated)
46:07 DEBUG   opendrift:2066: 0 elements scheduled.
46:07 DEBUG   opendrift:2068: ======================================================================
46:07 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.81808163127981
46:07 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.972801147255279
46:07 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:07 DEBUG   opendrift:2090: ---------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:07 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:07 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:07 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:07 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 14:00:00 (before)
                2025-04-13 15:00:00 (after)
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:09 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:09 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 66x41x7) for time after (2025-04-13 15:00:00)
46:09 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 14:00:00) in space  (linearNDFast)
46:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:09 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 15:00:00) in space  (linearNDFast)
46:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:09 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 14:00:00, weight 0.75) and
                      after (2025-04-13 15:00:00, weight 0.25) in time
46:09 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:09 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.02720983126584 degrees.
46:09 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.02720983126584 degrees.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:09 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:09 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:09 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:09 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:09 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:09 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:09 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.239429 (min) 0.584808 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.393256 (min) 0.444409 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.25611 (min) -0.207826 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -5.57173 (min) -4.92638 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 8.02072 (min) 8.87855 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 67.6022 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.41248 (min) 7.92291 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.5294 (min) 34.4555 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -9.81732e-05 (min) 0.00133218 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:09 DEBUG   opendrift:698: No elements hit coastline.
46:09 DEBUG   opendrift:737: No elements hit seafloor.
46:09 DEBUG   opendrift:1699: No elements to deactivate
46:09 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:09 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:09 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:09 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:09 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0]
46:09 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3]
46:09 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 288.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:09 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:09 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:09 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:09 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:09 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07583164173733206
46:09 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:09 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:09 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:09 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:09 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:09 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:09 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:09 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:09 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:09 INFO    opendrift.models.chemicaldrift:1882: partitioning: [181, 0, 7, 312, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:09 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:09 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:09 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:09 DEBUG   opendrift:737: No elements hit seafloor.
46:09 DEBUG   opendrift:2059: ======================================================================
46:09 INFO    opendrift:2060: 2025-04-13 14:44:52.046155 - step 57 of 96 - 500 active elements (0 deactivated)
46:09 DEBUG   opendrift:2066: 0 elements scheduled.
46:09 DEBUG   opendrift:2068: ======================================================================
46:09 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.81877817876502
46:09 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.974143402927181
46:09 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:09 DEBUG   opendrift:2090: ---------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 14:00:00 (before)
                2025-04-13 15:00:00 (after)
46:09 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 14:00:00) in space  (linearNDFast)
46:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:09 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 15:00:00) in space  (linearNDFast)
46:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:09 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 14:00:00, weight 0.25) and
                      after (2025-04-13 15:00:00, weight 0.75) in time
46:09 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:09 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.02586758085871 degrees.
46:09 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.02586758085871 degrees.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:09 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:09 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:09 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:09 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:09 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:09 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:09 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:09 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:09 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:09 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:09 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.238694 (min) 0.607537 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.36456 (min) 0.401788 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.215813 (min) -0.157813 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.80465 (min) -3.24678 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 8.69402 (min) 9.62939 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.8754 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.41748 (min) 7.94935 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.1145 (min) 34.4778 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000269211 (min) 0.00116487 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:09 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:09 DEBUG   opendrift:698: No elements hit coastline.
46:09 DEBUG   opendrift:737: No elements hit seafloor.
46:09 DEBUG   opendrift:1699: No elements to deactivate
46:09 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:09 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:09 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:09 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:09 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:09 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:09 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 290.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:09 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:09 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:09 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:09 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:09 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0815418604576224
46:09 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:09 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:09 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:09 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:09 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:09 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:09 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:09 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:09 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:09 INFO    opendrift.models.chemicaldrift:1882: partitioning: [179, 0, 7, 314, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:09 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:09 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:09 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:09 DEBUG   opendrift:737: No elements hit seafloor.
46:09 DEBUG   opendrift:2059: ======================================================================
46:09 INFO    opendrift:2060: 2025-04-13 15:14:52.046155 - step 58 of 96 - 500 active elements (0 deactivated)
46:09 DEBUG   opendrift:2066: 0 elements scheduled.
46:09 DEBUG   opendrift:2068: ======================================================================
46:09 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.81947163480215
46:09 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 10.984136150094372
46:09 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:09 DEBUG   opendrift:2090: ---------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:09 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:09 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:09 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:09 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 15:00:00 (before)
                2025-04-13 16:00:00 (after)
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:12 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:12 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 67x41x7) for time after (2025-04-13 16:00:00)
46:12 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 15:00:00) in space  (linearNDFast)
46:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:12 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 16:00:00) in space  (linearNDFast)
46:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:12 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 15:00:00, weight 0.75) and
                      after (2025-04-13 16:00:00, weight 0.25) in time
46:12 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.01587484520499 degrees.
46:12 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.01587484520499 degrees.
46:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:12 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:12 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:12 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:12 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:12 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:12 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:12 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:12 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:12 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:12 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:12 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:12 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:12 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.224281 (min) 0.620362 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.330622 (min) 0.507821 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.191051 (min) -0.127127 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -4.02956 (min) -1.8139 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 8.44085 (min) 10.0072 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.0535 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.42208 (min) 7.92476 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6328 (min) 34.5183 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -8.50442e-05 (min) 0.00100449 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:12 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:12 DEBUG   opendrift:698: No elements hit coastline.
46:12 DEBUG   opendrift:737: No elements hit seafloor.
46:12 DEBUG   opendrift:1699: No elements to deactivate
46:12 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:12 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:12 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:12 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:12 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:12 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08086391373246331
46:12 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:12 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:12 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:12 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:12 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:12 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:12 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:12 INFO    opendrift.models.chemicaldrift:1882: partitioning: [179, 0, 7, 314, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:12 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:12 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:12 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:12 DEBUG   opendrift:737: No elements hit seafloor.
46:12 DEBUG   opendrift:2059: ======================================================================
46:12 INFO    opendrift:2060: 2025-04-13 15:44:52.046155 - step 59 of 96 - 500 active elements (0 deactivated)
46:12 DEBUG   opendrift:2066: 0 elements scheduled.
46:12 DEBUG   opendrift:2068: ======================================================================
46:12 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.824697187116236
46:12 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 10.991635966057581
46:12 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:12 DEBUG   opendrift:2090: ---------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:13 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:13 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:13 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 15:00:00 (before)
                2025-04-13 16:00:00 (after)
46:13 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 15:00:00) in space  (linearNDFast)
46:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:13 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 16:00:00) in space  (linearNDFast)
46:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:13 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 15:00:00, weight 0.25) and
                      after (2025-04-13 16:00:00, weight 0.75) in time
46:13 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:13 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00837501872612 degrees.
46:13 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00837501872612 degrees.
46:13 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:13 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:13 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:13 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:13 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:13 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:13 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:13 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:13 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:13 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:13 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:13 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:13 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:13 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:13 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:13 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:13 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:13 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:13 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:13 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:13 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.205578 (min) 0.651537 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.27139 (min) 0.397044 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.184809 (min) -0.115595 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -3.11917 (min) -0.529495 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 7.49584 (min) 10.0371 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.4367 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.42628 (min) 7.96464 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.1792 (min) 34.5543 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -3.22852e-05 (min) 0.000834515 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:13 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:13 DEBUG   opendrift:698: No elements hit coastline.
46:13 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:13 DEBUG   opendrift:1699: No elements to deactivate
46:13 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:13 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:13 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:13 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
46:13 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0]
46:13 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3]
46:13 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 293.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:13 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:13 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:13 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:13 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:13 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07337844673907974
46:13 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:13 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:13 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:13 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
46:13 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:13 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:13 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:13 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:13 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:13 INFO    opendrift.models.chemicaldrift:1882: partitioning: [176, 0, 7, 317, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:13 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:13 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:13 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:13 DEBUG   opendrift:737: No elements hit seafloor.
46:13 DEBUG   opendrift:2059: ======================================================================
46:13 INFO    opendrift:2060: 2025-04-13 16:14:52.046155 - step 60 of 96 - 500 active elements (0 deactivated)
46:13 DEBUG   opendrift:2066: 0 elements scheduled.
46:13 DEBUG   opendrift:2068: ======================================================================
46:13 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.830439729160716
46:13 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 10.992737875616653
46:13 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:13 DEBUG   opendrift:2090: ---------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:13 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:13 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:13 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:13 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 16:00:00 (before)
                2025-04-13 17:00:00 (after)
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:15 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:15 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 70x41x7) for time after (2025-04-13 17:00:00)
46:15 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 16:00:00) in space  (linearNDFast)
46:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:15 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 17:00:00) in space  (linearNDFast)
46:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:15 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 16:00:00, weight 0.75) and
                      after (2025-04-13 17:00:00, weight 0.25) in time
46:15 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00727310628388 degrees.
46:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00727310628388 degrees.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:15 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:15 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.21462 (min) 0.606721 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.25605 (min) 0.407859 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.189565 (min) -0.120311 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: -1.45627 (min) 1.57828 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.9169 (min) 9.89712 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.7312 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.43087 (min) 7.93492 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.7141 (min) 34.5774 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000312674 (min) 0.000636426 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:15 DEBUG   opendrift:698: No elements hit coastline.
46:15 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:15 DEBUG   opendrift:1699: No elements to deactivate
46:15 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:15 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:15 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:15 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:15 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:15 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:15 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 294.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:15 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:15 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:15 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07130987392106015
46:15 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:15 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:15 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:15 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:15 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:15 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:15 INFO    opendrift.models.chemicaldrift:1882: partitioning: [175, 0, 7, 318, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:15 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:15 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:15 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:15 DEBUG   opendrift:737: No elements hit seafloor.
46:15 DEBUG   opendrift:2059: ======================================================================
46:15 INFO    opendrift:2060: 2025-04-13 16:44:52.046155 - step 61 of 96 - 500 active elements (0 deactivated)
46:15 DEBUG   opendrift:2066: 0 elements scheduled.
46:15 DEBUG   opendrift:2068: ======================================================================
46:15 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.83148588678455
46:15 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 10.996759696193536
46:15 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   0.0
46:15 DEBUG   opendrift:2090: ---------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 16:00:00 (before)
                2025-04-13 17:00:00 (after)
46:15 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 16:00:00) in space  (linearNDFast)
46:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:15 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 17:00:00) in space  (linearNDFast)
46:15 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:15 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 16:00:00, weight 0.25) and
                      after (2025-04-13 17:00:00, weight 0.75) in time
46:15 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00325129383571 degrees.
46:15 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -59.00325129383571 degrees.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:15 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:15 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:15 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:15 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:15 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:15 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:15 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:15 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.217636 (min) 0.563869 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.229035 (min) 0.543326 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.206403 (min) -0.141861 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 0.693666 (min) 4.64004 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.71053 (min) 9.4833 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.0864 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.43479 (min) 8.01362 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.5296 (min) 34.5874 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00028288 (min) 0.000623832 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:15 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:15 DEBUG   opendrift:698: No elements hit coastline.
46:15 DEBUG   opendrift:742: Lifting 4 elements to seafloor.
46:15 DEBUG   opendrift:1699: No elements to deactivate
46:15 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:15 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:15 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:15 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:15 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:15 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:15 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 295.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:15 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:15 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:15 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06568637030202254
46:15 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:15 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:15 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:15 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:15 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:15 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:15 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:15 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:15 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:15 INFO    opendrift.models.chemicaldrift:1882: partitioning: [174, 0, 7, 319, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:15 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:15 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:15 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:15 DEBUG   opendrift:737: No elements hit seafloor.
46:15 DEBUG   opendrift:2059: ======================================================================
46:15 INFO    opendrift:2060: 2025-04-13 17:14:52.046155 - step 62 of 96 - 500 active elements (0 deactivated)
46:15 DEBUG   opendrift:2066: 0 elements scheduled.
46:15 DEBUG   opendrift:2068: ======================================================================
46:15 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.83265042278973
46:15 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 11.00718118346995
46:15 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   -0.17223187200875834
46:15 DEBUG   opendrift:2090: ---------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:15 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:15 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:15 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:15 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 17:00:00 (before)
                2025-04-13 18:00:00 (after)
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:18 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:18 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 71x41x7) for time after (2025-04-13 18:00:00)
46:18 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 17:00:00) in space  (linearNDFast)
46:18 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:18 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 18:00:00) in space  (linearNDFast)
46:18 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:18 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 17:00:00, weight 0.75) and
                      after (2025-04-13 18:00:00, weight 0.25) in time
46:18 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:18 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.99282979718631 degrees.
46:18 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.99282979718631 degrees.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:18 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:18 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:18 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:18 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:18 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:18 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:18 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.22313 (min) 0.605895 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.201876 (min) 0.474235 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.227871 (min) -0.169768 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 2.68787 (min) 6.04733 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 6.02806 (min) 8.58284 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.6451 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.43885 (min) 7.95433 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.7739 (min) 34.5923 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000372955 (min) 0.000525895 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:18 DEBUG   opendrift:698: No elements hit coastline.
46:18 DEBUG   opendrift:742: Lifting 7 elements to seafloor.
46:18 DEBUG   opendrift:1699: No elements to deactivate
46:18 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:18 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:18 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:18 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:18 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:18 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.060966692089772095
46:18 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:18 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:18 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:18 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:18 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:18 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:18 INFO    opendrift.models.chemicaldrift:1882: partitioning: [174, 0, 7, 319, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:18 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:18 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:18 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:18 DEBUG   opendrift:737: No elements hit seafloor.
46:18 DEBUG   opendrift:2059: ======================================================================
46:18 INFO    opendrift:2060: 2025-04-13 17:44:52.046155 - step 63 of 96 - 500 active elements (0 deactivated)
46:18 DEBUG   opendrift:2066: 0 elements scheduled.
46:18 DEBUG   opendrift:2068: ======================================================================
46:18 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.83398744891299
46:18 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 11.017154648990484
46:18 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   -0.023710473452089986
46:18 DEBUG   opendrift:2090: ---------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 17:00:00 (before)
                2025-04-13 18:00:00 (after)
46:18 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 17:00:00) in space  (linearNDFast)
46:18 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:18 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 18:00:00) in space  (linearNDFast)
46:18 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:18 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 17:00:00, weight 0.25) and
                      after (2025-04-13 18:00:00, weight 0.75) in time
46:18 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:18 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.98285633542808 degrees.
46:18 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.98285633542808 degrees.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:18 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:18 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:18 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:18 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:18 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:18 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:18 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:18 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:18 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:18 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:18 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.213442 (min) 0.637695 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.174569 (min) 0.408765 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.253623 (min) -0.205216 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.5101 (min) 5.71695 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.85733 (min) 7.16577 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.3408 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.44196 (min) 7.96727 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8011 (min) 34.5919 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000344443 (min) 0.000492386 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:18 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:18 DEBUG   opendrift:698: No elements hit coastline.
46:18 DEBUG   opendrift:742: Lifting 8 elements to seafloor.
46:18 DEBUG   opendrift:1699: No elements to deactivate
46:18 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:18 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:18 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:18 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:18 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:18 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:18 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 296.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:18 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:18 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:18 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:18 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:18 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.05466839444427332
46:18 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:18 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:18 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:18 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:18 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:18 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:18 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:18 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:18 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:18 INFO    opendrift.models.chemicaldrift:1882: partitioning: [173, 0, 7, 320, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:18 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:18 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:18 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:18 DEBUG   opendrift:737: No elements hit seafloor.
46:18 DEBUG   opendrift:2059: ======================================================================
46:18 INFO    opendrift:2060: 2025-04-13 18:14:52.046155 - step 64 of 96 - 500 active elements (0 deactivated)
46:18 DEBUG   opendrift:2066: 0 elements scheduled.
46:18 DEBUG   opendrift:2068: ======================================================================
46:18 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.835078254827366
46:18 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 11.031751171659167
46:18 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   -0.01687801537163003
46:18 DEBUG   opendrift:2090: ---------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:18 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:18 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:18 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:18 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:18 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 18:00:00 (before)
                2025-04-13 19:00:00 (after)
46:20 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:20 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:20 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:20 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:20 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:20 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:20 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 72x41x7) for time after (2025-04-13 19:00:00)
46:20 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 18:00:00) in space  (linearNDFast)
46:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:20 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 19:00:00) in space  (linearNDFast)
46:20 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:20 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 18:00:00, weight 0.75) and
                      after (2025-04-13 19:00:00, weight 0.25) in time
46:20 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.968259794925075 degrees.
46:20 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.968259794925075 degrees.
46:20 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:20 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:20 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:20 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:20 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:20 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:20 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:20 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:20 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:21 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:21 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:21 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:21 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:21 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:21 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:21 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:21 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:21 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:21 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:21 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:21 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:21 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:21 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:21 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.20586 (min) 0.684395 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.155151 (min) 0.352106 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.279769 (min) -0.238655 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.69903 (min) 5.58359 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.2456 (min) 6.15702 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 64.8444 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.44557 (min) 7.99477 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.4775 (min) 34.5893 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000509338 (min) 0.000473518 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:21 DEBUG   opendrift:698: No elements hit coastline.
46:21 DEBUG   opendrift:742: Lifting 9 elements to seafloor.
46:21 DEBUG   opendrift:1699: No elements to deactivate
46:21 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:21 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:21 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:21 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:21 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:21 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:21 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 297.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:21 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:21 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:21 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:21 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:21 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.046462759982473546
46:21 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:21 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:21 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:21 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:21 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:21 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:21 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:21 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:21 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:21 INFO    opendrift.models.chemicaldrift:1882: partitioning: [172, 0, 7, 321, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:21 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:21 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:21 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:21 DEBUG   opendrift:737: No elements hit seafloor.
46:21 DEBUG   opendrift:2059: ======================================================================
46:21 INFO    opendrift:2060: 2025-04-13 18:44:52.046155 - step 65 of 96 - 500 active elements (0 deactivated)
46:21 DEBUG   opendrift:2066: 0 elements scheduled.
46:21 DEBUG   opendrift:2068: ======================================================================
46:21 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.8365037044192
46:21 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 11.043326147656154
46:21 DEBUG   opendrift:2089:                -39.480899810791016   <- z ->   -0.20486374678285246
46:21 DEBUG   opendrift:2090: ---------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:21 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:21 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:21 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 18:00:00 (before)
                2025-04-13 19:00:00 (after)
46:21 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 18:00:00) in space  (linearNDFast)
46:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:21 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 19:00:00) in space  (linearNDFast)
46:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:21 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 18:00:00, weight 0.25) and
                      after (2025-04-13 19:00:00, weight 0.75) in time
46:21 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:21 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.95668481842962 degrees.
46:21 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.95668481842962 degrees.
46:21 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:21 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:21 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:21 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:21 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:21 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:21 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:21 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:21 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:21 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:21 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:21 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:21 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:21 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:21 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:21 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:21 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:21 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:21 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:21 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:21 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.204031 (min) 0.716905 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.14125 (min) 0.2866 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.306185 (min) -0.267231 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.22469 (min) 4.20613 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.19177 (min) 5.41777 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 64.5994 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.44851 (min) 7.99112 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6792 (min) 34.5843 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000397472 (min) 0.000489263 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:21 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:21 DEBUG   opendrift:698: No elements hit coastline.
46:21 DEBUG   opendrift:742: Lifting 11 elements to seafloor.
46:21 DEBUG   opendrift:1699: No elements to deactivate
46:21 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:21 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:21 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:21 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
46:21 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0]
46:21 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3]
46:21 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 300.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 10.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:21 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:21 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:21 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:21 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:21 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.032481752204111994
46:21 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:21 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:21 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:21 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
46:21 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:21 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:21 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:21 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:21 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:21 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:21 INFO    opendrift.models.chemicaldrift:1882: partitioning: [169, 0, 7, 324, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:21 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:21 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:21 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:21 DEBUG   opendrift:737: No elements hit seafloor.
46:21 DEBUG   opendrift:2059: ======================================================================
46:21 INFO    opendrift:2060: 2025-04-13 19:14:52.046155 - step 66 of 96 - 500 active elements (0 deactivated)
46:21 DEBUG   opendrift:2066: 0 elements scheduled.
46:21 DEBUG   opendrift:2068: ======================================================================
46:21 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.83790676642014
46:21 DEBUG   opendrift:2084:                10.512965885539495 <- longitude -> 11.048956170865317
46:21 DEBUG   opendrift:2089:                -39.49441360466804   <- z ->   -0.22581269166881734
46:21 DEBUG   opendrift:2090: ---------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:21 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:21 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:21 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:21 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 19:00:00 (before)
                2025-04-13 20:00:00 (after)
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:23 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:23 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 72x41x7) for time after (2025-04-13 20:00:00)
46:23 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 19:00:00) in space  (linearNDFast)
46:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:23 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 20:00:00) in space  (linearNDFast)
46:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:23 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 19:00:00, weight 0.75) and
                      after (2025-04-13 20:00:00, weight 0.25) in time
46:23 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:23 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.95105480215054 degrees.
46:23 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.95105480215054 degrees.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:23 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:23 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:23 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:23 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:23 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:23 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:23 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.191335 (min) 0.664974 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.130661 (min) 0.242164 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.332882 (min) -0.294131 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 2.98293 (min) 4.19034 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.25783 (min) 5.17979 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 64.3417 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.45169 (min) 8.0004 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6914 (min) 34.5773 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000412406 (min) 0.00044777 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:23 DEBUG   opendrift:698: No elements hit coastline.
46:23 DEBUG   opendrift:742: Lifting 14 elements to seafloor.
46:23 DEBUG   opendrift:1699: No elements to deactivate
46:23 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:23 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:23 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:23 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:23 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:23 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.027986596977744947
46:23 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:23 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:23 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:23 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:23 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:23 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:23 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:23 INFO    opendrift.models.chemicaldrift:1882: partitioning: [169, 0, 7, 324, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:23 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:23 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:23 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:23 DEBUG   opendrift:737: No elements hit seafloor.
46:23 DEBUG   opendrift:2059: ======================================================================
46:23 INFO    opendrift:2060: 2025-04-13 19:44:52.046155 - step 67 of 96 - 500 active elements (0 deactivated)
46:23 DEBUG   opendrift:2066: 0 elements scheduled.
46:23 DEBUG   opendrift:2068: ======================================================================
46:23 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.838908309307506
46:23 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.057888564809865
46:23 DEBUG   opendrift:2089:                -39.479418140171866   <- z ->   -0.12524816701940444
46:23 DEBUG   opendrift:2090: ---------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 19:00:00 (before)
                2025-04-13 20:00:00 (after)
46:23 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 19:00:00) in space  (linearNDFast)
46:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:23 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 20:00:00) in space  (linearNDFast)
46:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:23 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 19:00:00, weight 0.25) and
                      after (2025-04-13 20:00:00, weight 0.75) in time
46:23 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:23 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.94212240039539 degrees.
46:23 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.94212240039539 degrees.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:23 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:23 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:23 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:23 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:23 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:23 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:23 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:23 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:23 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:23 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:23 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.170339 (min) 0.731023 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.12876 (min) 0.241265 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.359967 (min) -0.319634 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.30191 (min) 5.20989 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.06929 (min) 5.63919 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.9834 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.45511 (min) 8.00736 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.7347 (min) 34.5684 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000390914 (min) 0.000445461 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:23 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:23 DEBUG   opendrift:698: No elements hit coastline.
46:23 DEBUG   opendrift:742: Lifting 14 elements to seafloor.
46:23 DEBUG   opendrift:1699: No elements to deactivate
46:23 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:23 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:23 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:23 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:23 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3]
46:23 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0]
46:23 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 301.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  34.   0.]
 [ 11.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:23 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:23 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:23 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:23 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:23 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.035433017109315346
46:23 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:23 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:23 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:23 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:23 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:23 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:23 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:23 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:23 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:23 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:23 INFO    opendrift.models.chemicaldrift:1882: partitioning: [169, 0, 6, 325, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:23 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:23 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:23 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:23 DEBUG   opendrift:737: No elements hit seafloor.
46:23 DEBUG   opendrift:2059: ======================================================================
46:23 INFO    opendrift:2060: 2025-04-13 20:14:52.046155 - step 68 of 96 - 500 active elements (0 deactivated)
46:23 DEBUG   opendrift:2066: 0 elements scheduled.
46:23 DEBUG   opendrift:2068: ======================================================================
46:23 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.839835827780064
46:23 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.06987455095847
46:23 DEBUG   opendrift:2089:                -40.0431660023855   <- z ->   -0.502956185849118
46:23 DEBUG   opendrift:2090: ---------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:23 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:23 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:23 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:23 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 20:00:00 (before)
                2025-04-13 21:00:00 (after)
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:25 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:25 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 73x41x7) for time after (2025-04-13 21:00:00)
46:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 20:00:00) in space  (linearNDFast)
46:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 21:00:00) in space  (linearNDFast)
46:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 20:00:00, weight 0.75) and
                      after (2025-04-13 21:00:00, weight 0.25) in time
46:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.930136404627355 degrees.
46:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.930136404627355 degrees.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:25 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:25 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.159345 (min) 0.668571 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.127973 (min) 0.206689 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.386544 (min) -0.344024 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.75247 (min) 5.66889 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.17312 (min) 5.90309 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.6908 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.45784 (min) 8.01553 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.5436 (min) 34.5575 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000287365 (min) 0.000427126 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:25 DEBUG   opendrift:698: No elements hit coastline.
46:25 DEBUG   opendrift:742: Lifting 17 elements to seafloor.
46:25 DEBUG   opendrift:1699: No elements to deactivate
46:25 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:25 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:25 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:25 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:25 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3]
46:25 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0]
46:25 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 301.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  35.   0.]
 [ 12.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:25 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:25 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:25 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.038868230090795895
46:25 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:25 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:25 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:25 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:25 INFO    opendrift.models.chemicaldrift:1882: partitioning: [170, 0, 6, 324, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:25 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:25 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:25 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:25 DEBUG   opendrift:737: No elements hit seafloor.
46:25 DEBUG   opendrift:2059: ======================================================================
46:25 INFO    opendrift:2060: 2025-04-13 20:44:52.046155 - step 69 of 96 - 500 active elements (0 deactivated)
46:25 DEBUG   opendrift:2066: 0 elements scheduled.
46:25 DEBUG   opendrift:2068: ======================================================================
46:25 DEBUG   opendrift:2079:                57.56032305758966 <- latitude  -> 57.84080944327389
46:25 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.077245154364713
46:25 DEBUG   opendrift:2089:                -40.60792837784495   <- z ->   -0.23189437605790708
46:25 DEBUG   opendrift:2090: ---------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 20:00:00 (before)
                2025-04-13 21:00:00 (after)
46:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 20:00:00) in space  (linearNDFast)
46:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 21:00:00) in space  (linearNDFast)
46:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 20:00:00, weight 0.25) and
                      after (2025-04-13 21:00:00, weight 0.75) in time
46:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.92276581318309 degrees.
46:25 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.92276581318309 degrees.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:25 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:25 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:25 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:25 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:25 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:25 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:25 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:25 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.159286 (min) 0.673597 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.13641 (min) 0.25947 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.413082 (min) -0.368505 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.23919 (min) 5.55734 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.35579 (min) 5.98616 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.4101 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.45988 (min) 8.01353 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.3246 (min) 34.5448 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000284997 (min) 0.000392479 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:25 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:25 DEBUG   opendrift:698: No elements hit coastline.
46:25 DEBUG   opendrift:742: Lifting 17 elements to seafloor.
46:25 DEBUG   opendrift:1699: No elements to deactivate
46:25 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:25 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:25 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:25 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:25 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3]
46:25 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0]
46:25 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 302.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:25 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:25 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:25 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04552531402730962
46:25 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:25 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:25 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:25 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:25 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:25 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:25 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:25 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:25 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:25 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:25 INFO    opendrift.models.chemicaldrift:1882: partitioning: [170, 0, 6, 324, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:25 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:25 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:25 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:25 DEBUG   opendrift:737: No elements hit seafloor.
46:25 DEBUG   opendrift:2059: ======================================================================
46:25 INFO    opendrift:2060: 2025-04-13 21:14:52.046155 - step 70 of 96 - 500 active elements (0 deactivated)
46:25 DEBUG   opendrift:2066: 0 elements scheduled.
46:25 DEBUG   opendrift:2068: ======================================================================
46:25 DEBUG   opendrift:2079:                57.56032305758967 <- latitude  -> 57.841959104770496
46:25 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.08707418490364
46:25 DEBUG   opendrift:2089:                -40.76471363565184   <- z ->   0.0
46:25 DEBUG   opendrift:2090: ---------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:25 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:25 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:25 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:25 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 21:00:00 (before)
                2025-04-13 22:00:00 (after)
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:27 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:27 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 74x41x7) for time after (2025-04-13 22:00:00)
46:27 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 21:00:00) in space  (linearNDFast)
46:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:27 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 22:00:00) in space  (linearNDFast)
46:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:27 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 21:00:00, weight 0.75) and
                      after (2025-04-13 22:00:00, weight 0.25) in time
46:27 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.91293677495461 degrees.
46:27 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.91293677495461 degrees.
46:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:27 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:27 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:27 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:27 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:27 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:27 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:27 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:27 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:27 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:27 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:27 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:27 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:27 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.163926 (min) 0.595682 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.125989 (min) 0.19831 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.435699 (min) -0.388761 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.74799 (min) 6.04433 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 4.08277 (min) 5.7275 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.1571 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.46339 (min) 8.00839 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.3203 (min) 34.5299 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000285706 (min) 0.00036466 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:27 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:27 DEBUG   opendrift:698: No elements hit coastline.
46:27 DEBUG   opendrift:742: Lifting 18 elements to seafloor.
46:27 DEBUG   opendrift:1699: No elements to deactivate
46:27 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:27 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:27 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:27 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:27 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:27 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:27 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 304.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:27 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:27 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:27 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:28 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:28 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.04850948985889836
46:28 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:28 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:28 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:28 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:28 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:28 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:28 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:28 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:28 INFO    opendrift.models.chemicaldrift:1882: partitioning: [168, 0, 6, 326, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:28 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:28 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:28 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:28 DEBUG   opendrift:737: No elements hit seafloor.
46:28 DEBUG   opendrift:2059: ======================================================================
46:28 INFO    opendrift:2060: 2025-04-13 21:44:52.046155 - step 71 of 96 - 500 active elements (0 deactivated)
46:28 DEBUG   opendrift:2066: 0 elements scheduled.
46:28 DEBUG   opendrift:2068: ======================================================================
46:28 DEBUG   opendrift:2079:                57.560323057589656 <- latitude  -> 57.84315942000948
46:28 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.090979051705878
46:28 DEBUG   opendrift:2089:                -40.60889477515158   <- z ->   -0.2116921873192008
46:28 DEBUG   opendrift:2090: ---------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:28 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:28 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:28 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:28 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 21:00:00 (before)
                2025-04-13 22:00:00 (after)
46:28 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 21:00:00) in space  (linearNDFast)
46:28 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:28 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 22:00:00) in space  (linearNDFast)
46:28 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:28 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 21:00:00, weight 0.25) and
                      after (2025-04-13 22:00:00, weight 0.75) in time
46:28 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:28 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.90903191447373 degrees.
46:28 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.90903191447373 degrees.
46:28 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:28 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:28 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:28 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:28 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:28 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:28 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:28 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:28 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:28 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:28 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:28 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:28 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:28 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:28 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:28 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:28 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:28 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:28 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:28 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:28 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.167657 (min) 0.543403 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.1113 (min) 0.189795 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.454204 (min) -0.404922 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.62511 (min) 7.34087 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.63867 (min) 5.4359 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.9866 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.46839 (min) 8.00339 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8637 (min) 34.5165 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000342941 (min) 0.000335909 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:28 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:28 DEBUG   opendrift:698: No elements hit coastline.
46:28 DEBUG   opendrift:742: Lifting 20 elements to seafloor.
46:28 DEBUG   opendrift:1699: No elements to deactivate
46:28 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:28 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:28 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:28 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:28 DEBUG   opendrift.models.chemicaldrift:1473: old species: [2]
46:28 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0]
46:28 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 304.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:28 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:28 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:28 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:28 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:28 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.052829735620996875
46:28 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:28 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:28 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:28 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:28 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:28 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:28 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:28 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:28 INFO    opendrift.models.chemicaldrift:1882: partitioning: [169, 0, 5, 326, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:28 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:28 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:28 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:28 DEBUG   opendrift:737: No elements hit seafloor.
46:28 DEBUG   opendrift:2059: ======================================================================
46:28 INFO    opendrift:2060: 2025-04-13 22:14:52.046155 - step 72 of 96 - 500 active elements (0 deactivated)
46:28 DEBUG   opendrift:2066: 0 elements scheduled.
46:28 DEBUG   opendrift:2068: ======================================================================
46:28 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.84451901237971
46:28 DEBUG   opendrift:2084:                10.5129658855395 <- longitude -> 11.090663424924964
46:28 DEBUG   opendrift:2089:                -40.00143877598528   <- z ->   0.0
46:28 DEBUG   opendrift:2090: ---------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:28 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:28 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:28 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:28 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:28 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 22:00:00 (before)
                2025-04-13 23:00:00 (after)
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:30 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:30 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 75x41x7) for time after (2025-04-13 23:00:00)
46:30 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 22:00:00) in space  (linearNDFast)
46:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:30 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 23:00:00) in space  (linearNDFast)
46:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:30 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 22:00:00, weight 0.75) and
                      after (2025-04-13 23:00:00, weight 0.25) in time
46:30 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:30 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.909347534946434 degrees.
46:30 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.909347534946434 degrees.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:30 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:30 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:30 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:30 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:30 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:30 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:30 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.166964 (min) 0.50929 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.116975 (min) 0.190129 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.462521 (min) -0.412366 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 6.25773 (min) 8.07499 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.42198 (min) 5.06038 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.8947 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.47226 (min) 7.996 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8809 (min) 34.5038 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000490335 (min) 0.000314826 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:30 DEBUG   opendrift:698: No elements hit coastline.
46:30 DEBUG   opendrift:742: Lifting 20 elements to seafloor.
46:30 DEBUG   opendrift:1699: No elements to deactivate
46:30 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:30 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:30 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:30 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:30 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:30 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:30 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 305.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:30 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:30 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:30 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:30 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:30 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.05736824839799028
46:30 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:30 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:30 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:30 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:30 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:30 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:30 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:30 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:30 INFO    opendrift.models.chemicaldrift:1882: partitioning: [168, 0, 5, 327, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:30 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:30 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:30 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:30 DEBUG   opendrift:737: No elements hit seafloor.
46:30 DEBUG   opendrift:2059: ======================================================================
46:30 INFO    opendrift:2060: 2025-04-13 22:44:52.046155 - step 73 of 96 - 500 active elements (0 deactivated)
46:30 DEBUG   opendrift:2066: 0 elements scheduled.
46:30 DEBUG   opendrift:2068: ======================================================================
46:30 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.84595811506146
46:30 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 11.09128577282797
46:30 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.7163671089096242
46:30 DEBUG   opendrift:2090: ---------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 22:00:00 (before)
                2025-04-13 23:00:00 (after)
46:30 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 22:00:00) in space  (linearNDFast)
46:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:30 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-13 23:00:00) in space  (linearNDFast)
46:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:30 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 22:00:00, weight 0.25) and
                      after (2025-04-13 23:00:00, weight 0.75) in time
46:30 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:30 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.90872518059469 degrees.
46:30 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.90872518059469 degrees.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:30 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:30 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:30 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:30 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:30 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:30 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:30 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:30 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:30 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:30 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:30 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.170521 (min) 0.462906 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.125612 (min) 0.214621 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.462876 (min) -0.413468 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 6.90959 (min) 8.0048 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.52741 (min) 4.44525 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.7968 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.47682 (min) 7.98619 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.4305 (min) 34.5039 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00060059 (min) 0.000356719 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:30 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:30 DEBUG   opendrift:698: No elements hit coastline.
46:30 DEBUG   opendrift:742: Lifting 7 elements to seafloor.
46:30 DEBUG   opendrift:1699: No elements to deactivate
46:30 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:30 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:30 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:30 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:30 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:30 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:30 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 306.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:30 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:30 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:30 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:30 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:30 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.05726333731791432
46:30 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:30 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:30 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:30 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:30 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:30 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:30 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:30 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:30 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:30 INFO    opendrift.models.chemicaldrift:1882: partitioning: [167, 0, 5, 328, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:30 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:30 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:30 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:30 DEBUG   opendrift:737: No elements hit seafloor.
46:30 DEBUG   opendrift:2059: ======================================================================
46:30 INFO    opendrift:2060: 2025-04-13 23:14:52.046155 - step 74 of 96 - 500 active elements (0 deactivated)
46:30 DEBUG   opendrift:2066: 0 elements scheduled.
46:30 DEBUG   opendrift:2068: ======================================================================
46:30 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.84710386451547
46:30 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 11.10098428046818
46:30 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.19026227437676968
46:30 DEBUG   opendrift:2090: ---------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:30 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:30 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:30 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:30 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 23:00:00 (before)
                2025-04-14 00:00:00 (after)
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:32 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:32 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 75x41x7) for time after (2025-04-14 00:00:00)
46:32 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 23:00:00) in space  (linearNDFast)
46:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:32 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 00:00:00) in space  (linearNDFast)
46:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:32 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 23:00:00, weight 0.75) and
                      after (2025-04-14 00:00:00, weight 0.25) in time
46:32 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:32 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.89902666753926 degrees.
46:32 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.89902666753926 degrees.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:32 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:32 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:32 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:32 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:32 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:32 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:32 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.164027 (min) 0.482402 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.113267 (min) 0.263268 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.453077 (min) -0.401153 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 7.69979 (min) 8.40416 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.36857 (min) 4.17352 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.6616 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.47917 (min) 7.97431 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.9236 (min) 34.4759 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000420069 (min) 0.000326833 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:32 DEBUG   opendrift:698: No elements hit coastline.
46:32 DEBUG   opendrift:737: No elements hit seafloor.
46:32 DEBUG   opendrift:1699: No elements to deactivate
46:32 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:32 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:32 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:32 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:32 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:32 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:32 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 307.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:32 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:32 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:32 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:32 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:32 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06315534283401135
46:32 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:32 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:32 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:32 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:32 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:32 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:32 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:32 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:32 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:32 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:32 INFO    opendrift.models.chemicaldrift:1882: partitioning: [166, 0, 5, 329, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:32 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:32 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:32 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:32 DEBUG   opendrift:737: No elements hit seafloor.
46:32 DEBUG   opendrift:2059: ======================================================================
46:32 INFO    opendrift:2060: 2025-04-13 23:44:52.046155 - step 75 of 96 - 500 active elements (0 deactivated)
46:32 DEBUG   opendrift:2066: 0 elements scheduled.
46:32 DEBUG   opendrift:2068: ======================================================================
46:32 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.84833429814676
46:32 DEBUG   opendrift:2084:                10.512965885539506 <- longitude -> 11.108710209226908
46:32 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.08226785084283272
46:32 DEBUG   opendrift:2090: ---------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-13 23:00:00 (before)
                2025-04-14 00:00:00 (after)
46:32 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-13 23:00:00) in space  (linearNDFast)
46:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:32 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 00:00:00) in space  (linearNDFast)
46:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:32 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-13 23:00:00, weight 0.25) and
                      after (2025-04-14 00:00:00, weight 0.75) in time
46:32 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:32 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.89130074000437 degrees.
46:32 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.89130074000437 degrees.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:32 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:32 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:32 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:32 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:32 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:32 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:32 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:32 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:32 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:32 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:32 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.167143 (min) 0.458463 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0936062 (min) 0.226168 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.428577 (min) -0.374969 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 8.13407 (min) 9.52722 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.94072 (min) 3.90521 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.2033 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.47972 (min) 7.96035 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.9429 (min) 34.4623 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000433325 (min) 0.00030356 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:32 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:32 DEBUG   opendrift:698: No elements hit coastline.
46:32 DEBUG   opendrift:737: No elements hit seafloor.
46:32 DEBUG   opendrift:1699: No elements to deactivate
46:32 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:32 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:32 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:32 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:32 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:32 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:32 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 309.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 13.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:32 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:32 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:32 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:32 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:32 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.07647523004846168
46:32 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:32 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:32 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:32 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:32 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:32 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:32 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:32 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:32 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:32 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:32 INFO    opendrift.models.chemicaldrift:1882: partitioning: [164, 0, 5, 331, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:32 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:32 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:32 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:32 DEBUG   opendrift:737: No elements hit seafloor.
46:32 DEBUG   opendrift:2059: ======================================================================
46:32 INFO    opendrift:2060: 2025-04-14 00:14:52.046155 - step 76 of 96 - 500 active elements (0 deactivated)
46:32 DEBUG   opendrift:2066: 0 elements scheduled.
46:32 DEBUG   opendrift:2068: ======================================================================
46:32 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.851342487871754
46:32 DEBUG   opendrift:2084:                10.512965885539506 <- longitude -> 11.112153954774755
46:32 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.21030374797653106
46:32 DEBUG   opendrift:2090: ---------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:32 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:32 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:32 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:32 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 00:00:00 (before)
                2025-04-14 01:00:00 (after)
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:34 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:34 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 76x41x7) for time after (2025-04-14 01:00:00)
46:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 00:00:00) in space  (linearNDFast)
46:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 01:00:00) in space  (linearNDFast)
46:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 00:00:00, weight 0.75) and
                      after (2025-04-14 01:00:00, weight 0.25) in time
46:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.88785698400848 degrees.
46:34 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.88785698400848 degrees.
46:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:34 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:34 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:34 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:34 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:34 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:34 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:34 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:34 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:34 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:34 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:34 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:34 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:34 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.176875 (min) 0.498681 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.105672 (min) 0.218536 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.388506 (min) -0.335317 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 8.3359 (min) 10.199 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.86298 (min) 3.87721 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.1818 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48077 (min) 7.94776 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.9629 (min) 34.4877 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00046557 (min) 0.000282093 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:34 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:34 DEBUG   opendrift:698: No elements hit coastline.
46:34 DEBUG   opendrift:737: No elements hit seafloor.
46:34 DEBUG   opendrift:1699: No elements to deactivate
46:34 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:34 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:34 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:34 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:34 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 3]
46:34 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 0]
46:34 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 309.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 15.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:34 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:34 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:34 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:34 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:34 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.08603363350554306
46:34 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:34 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:34 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:35 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:35 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:35 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:35 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:35 INFO    opendrift.models.chemicaldrift:1882: partitioning: [166, 0, 5, 329, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:35 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:35 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:35 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:35 DEBUG   opendrift:737: No elements hit seafloor.
46:35 DEBUG   opendrift:2059: ======================================================================
46:35 INFO    opendrift:2060: 2025-04-14 00:44:52.046155 - step 77 of 96 - 500 active elements (0 deactivated)
46:35 DEBUG   opendrift:2066: 0 elements scheduled.
46:35 DEBUG   opendrift:2068: ======================================================================
46:35 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.85295908640628
46:35 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 11.114474181518682
46:35 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.10120204436441638
46:35 DEBUG   opendrift:2090: ---------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:35 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:35 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:35 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:35 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 00:00:00 (before)
                2025-04-14 01:00:00 (after)
46:35 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 00:00:00) in space  (linearNDFast)
46:35 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:35 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 01:00:00) in space  (linearNDFast)
46:35 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:35 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 00:00:00, weight 0.25) and
                      after (2025-04-14 01:00:00, weight 0.75) in time
46:35 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:35 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.885536762257225 degrees.
46:35 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.885536762257225 degrees.
46:35 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:35 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:35 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:35 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:35 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:35 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:35 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:35 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:35 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:35 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:35 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:35 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:35 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:35 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:35 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:35 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:35 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:35 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:35 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:35 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:35 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.187451 (min) 0.539577 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.120645 (min) 0.20917 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.332584 (min) -0.281382 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 8.29031 (min) 10.4415 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.14157 (min) 4.07408 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.4467 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48233 (min) 7.93656 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6377 (min) 34.4319 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000517143 (min) 0.000284566 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:35 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:35 DEBUG   opendrift:698: No elements hit coastline.
46:35 DEBUG   opendrift:737: No elements hit seafloor.
46:35 DEBUG   opendrift:1699: No elements to deactivate
46:35 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:35 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:35 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:35 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
46:35 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0 0 0]
46:35 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3 3 3]
46:35 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 312.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 16.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:35 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:35 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:35 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:35 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:35 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0903655403693205
46:35 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:35 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:35 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:35 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
46:35 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:35 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:35 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:35 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:35 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:35 INFO    opendrift.models.chemicaldrift:1882: partitioning: [164, 0, 5, 331, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:35 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:35 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:35 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:35 DEBUG   opendrift:737: No elements hit seafloor.
46:35 DEBUG   opendrift:2059: ======================================================================
46:35 INFO    opendrift:2060: 2025-04-14 01:14:52.046155 - step 78 of 96 - 500 active elements (0 deactivated)
46:35 DEBUG   opendrift:2066: 0 elements scheduled.
46:35 DEBUG   opendrift:2068: ======================================================================
46:35 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.853911273983606
46:35 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 11.120559801218606
46:35 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.17689064056427528
46:35 DEBUG   opendrift:2090: ---------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:35 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:35 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:35 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:35 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:35 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 01:00:00 (before)
                2025-04-14 02:00:00 (after)
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:37 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:37 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 77x41x7) for time after (2025-04-14 02:00:00)
46:37 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 01:00:00) in space  (linearNDFast)
46:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:37 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 02:00:00) in space  (linearNDFast)
46:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:37 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 01:00:00, weight 0.75) and
                      after (2025-04-14 02:00:00, weight 0.25) in time
46:37 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:37 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8794511480332 degrees.
46:37 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8794511480332 degrees.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:37 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:37 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:37 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:37 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:37 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:37 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:37 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.197081 (min) 0.560332 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.13814 (min) 0.20946 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.272679 (min) -0.226339 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 8.24035 (min) 10.7204 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.08273 (min) 4.0591 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.7937 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48352 (min) 7.92522 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.0034 (min) 34.4723 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000523486 (min) 0.000296142 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:37 DEBUG   opendrift:698: No elements hit coastline.
46:37 DEBUG   opendrift:737: No elements hit seafloor.
46:37 DEBUG   opendrift:1699: No elements to deactivate
46:37 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:37 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:37 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:37 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:37 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0]
46:37 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3]
46:37 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 313.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 17.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:37 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:37 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:37 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:37 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:37 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.09482116153071612
46:37 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:37 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:37 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:37 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:37 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:37 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:37 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:37 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:37 INFO    opendrift.models.chemicaldrift:1882: partitioning: [164, 0, 5, 331, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:37 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:37 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:37 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:37 DEBUG   opendrift:737: No elements hit seafloor.
46:37 DEBUG   opendrift:2059: ======================================================================
46:37 INFO    opendrift:2060: 2025-04-14 01:44:52.046155 - step 79 of 96 - 500 active elements (0 deactivated)
46:37 DEBUG   opendrift:2066: 0 elements scheduled.
46:37 DEBUG   opendrift:2068: ======================================================================
46:37 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.855950539093755
46:37 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 11.126873525168836
46:37 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   0.0
46:37 DEBUG   opendrift:2090: ---------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 01:00:00 (before)
                2025-04-14 02:00:00 (after)
46:37 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 01:00:00) in space  (linearNDFast)
46:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:37 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 02:00:00) in space  (linearNDFast)
46:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:37 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 01:00:00, weight 0.25) and
                      after (2025-04-14 02:00:00, weight 0.75) in time
46:37 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:37 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.87313740867778 degrees.
46:37 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.87313740867778 degrees.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:37 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:37 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:37 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:37 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:37 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:37 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:37 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:37 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:37 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:37 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:37 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.205748 (min) 0.556062 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.157341 (min) 0.185921 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.218731 (min) -0.169135 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 8.18593 (min) 10.9949 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.36733 (min) 3.95162 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 67.0379 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48432 (min) 7.91372 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.0217 (min) 34.4015 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000483793 (min) 0.000316384 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:37 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:37 DEBUG   opendrift:698: No elements hit coastline.
46:37 DEBUG   opendrift:737: No elements hit seafloor.
46:37 DEBUG   opendrift:1699: No elements to deactivate
46:37 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:37 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:37 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:37 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:37 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:37 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.09864384930222553
46:37 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:37 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:37 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:37 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:37 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:37 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:37 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:37 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:37 INFO    opendrift.models.chemicaldrift:1882: partitioning: [164, 0, 5, 331, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:37 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:37 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:37 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:37 DEBUG   opendrift:737: No elements hit seafloor.
46:37 DEBUG   opendrift:2059: ======================================================================
46:37 INFO    opendrift:2060: 2025-04-14 02:14:52.046155 - step 80 of 96 - 500 active elements (0 deactivated)
46:37 DEBUG   opendrift:2066: 0 elements scheduled.
46:37 DEBUG   opendrift:2068: ======================================================================
46:37 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.857377582020405
46:37 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 11.13399501639841
46:37 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   0.0
46:37 DEBUG   opendrift:2090: ---------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:37 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:37 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:37 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:37 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 02:00:00 (before)
                2025-04-14 03:00:00 (after)
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:39 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:39 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 78x41x7) for time after (2025-04-14 03:00:00)
46:39 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 02:00:00) in space  (linearNDFast)
46:39 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:39 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 03:00:00) in space  (linearNDFast)
46:39 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:39 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 02:00:00, weight 0.75) and
                      after (2025-04-14 03:00:00, weight 0.25) in time
46:39 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:39 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.86601591852492 degrees.
46:39 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.86601591852492 degrees.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:39 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:39 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:39 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:39 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:39 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:39 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:39 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.207096 (min) 0.548621 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.175295 (min) 0.163678 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.176242 (min) -0.119199 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 7.63249 (min) 10.6039 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.28126 (min) 3.85497 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.8974 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48482 (min) 7.9056 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.0364 (min) 34.406 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000398153 (min) 0.000357631 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:39 DEBUG   opendrift:698: No elements hit coastline.
46:39 DEBUG   opendrift:737: No elements hit seafloor.
46:39 DEBUG   opendrift:1699: No elements to deactivate
46:39 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:39 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:39 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:39 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:39 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:39 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.09199596926885349
46:39 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:39 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:39 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 4 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:39 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:39 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:39 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:39 INFO    opendrift.models.chemicaldrift:1882: partitioning: [164, 0, 5, 331, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:39 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:39 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:39 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:39 DEBUG   opendrift:737: No elements hit seafloor.
46:39 DEBUG   opendrift:2059: ======================================================================
46:39 INFO    opendrift:2060: 2025-04-14 02:44:52.046155 - step 81 of 96 - 500 active elements (0 deactivated)
46:39 DEBUG   opendrift:2066: 0 elements scheduled.
46:39 DEBUG   opendrift:2068: ======================================================================
46:39 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.85793824515896
46:39 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.140232069222709
46:39 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.017632211579564516
46:39 DEBUG   opendrift:2090: ---------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 02:00:00 (before)
                2025-04-14 03:00:00 (after)
46:39 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 02:00:00) in space  (linearNDFast)
46:39 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:39 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 03:00:00) in space  (linearNDFast)
46:39 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:39 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 02:00:00, weight 0.25) and
                      after (2025-04-14 03:00:00, weight 0.75) in time
46:39 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:39 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.85977887484681 degrees.
46:39 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.85977887484681 degrees.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:39 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:39 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:39 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:39 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:39 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:39 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:39 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:39 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:39 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:39 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:39 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.200863 (min) 0.503093 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.18338 (min) 0.110745 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.144522 (min) -0.0762638 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 6.57115 (min) 9.55921 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.81237 (min) 3.89217 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 66.4756 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48258 (min) 7.90092 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.0477 (min) 34.4093 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000312242 (min) 0.000415269 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:39 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:39 DEBUG   opendrift:698: No elements hit coastline.
46:39 DEBUG   opendrift:737: No elements hit seafloor.
46:39 DEBUG   opendrift:1699: No elements to deactivate
46:39 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:39 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:39 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:39 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 4
46:39 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3 0 0]
46:39 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0 3 3]
46:39 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 316.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 18.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:39 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:39 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:39 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:39 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:39 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0761470528254323
46:39 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:39 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:39 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
46:39 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:39 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:39 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:39 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:39 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:39 INFO    opendrift.models.chemicaldrift:1882: partitioning: [162, 0, 5, 333, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:39 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:39 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:39 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:39 DEBUG   opendrift:737: No elements hit seafloor.
46:39 DEBUG   opendrift:2059: ======================================================================
46:39 INFO    opendrift:2060: 2025-04-14 03:14:52.046155 - step 82 of 96 - 500 active elements (0 deactivated)
46:39 DEBUG   opendrift:2066: 0 elements scheduled.
46:39 DEBUG   opendrift:2068: ======================================================================
46:39 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.85881325537349
46:39 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.142879746444581
46:39 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   0.0
46:39 DEBUG   opendrift:2090: ---------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:39 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:39 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:39 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:39 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 03:00:00 (before)
                2025-04-14 04:00:00 (after)
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:41 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:41 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 79x41x7) for time after (2025-04-14 04:00:00)
46:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 03:00:00) in space  (linearNDFast)
46:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 04:00:00) in space  (linearNDFast)
46:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 03:00:00, weight 0.75) and
                      after (2025-04-14 04:00:00, weight 0.25) in time
46:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.857131198697196 degrees.
46:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.857131198697196 degrees.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:41 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:41 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.186258 (min) 0.490675 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.17144 (min) 0.123421 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.127414 (min) -0.0490668 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 6.09981 (min) 9.0588 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.92699 (min) 3.9418 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.9422 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.4812 (min) 7.89415 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.0598 (min) 34.4308 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000374597 (min) 0.000421492 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:41 DEBUG   opendrift:698: No elements hit coastline.
46:41 DEBUG   opendrift:737: No elements hit seafloor.
46:41 DEBUG   opendrift:1699: No elements to deactivate
46:41 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:41 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:41 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:41 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:41 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3]
46:41 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0]
46:41 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 317.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 19.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:41 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:41 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:41 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06914578104036272
46:41 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:41 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:41 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:41 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:41 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:41 INFO    opendrift.models.chemicaldrift:1882: partitioning: [162, 0, 5, 333, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:41 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:41 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:41 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:41 DEBUG   opendrift:737: No elements hit seafloor.
46:41 DEBUG   opendrift:2059: ======================================================================
46:41 INFO    opendrift:2060: 2025-04-14 03:44:52.046155 - step 83 of 96 - 500 active elements (0 deactivated)
46:41 DEBUG   opendrift:2066: 0 elements scheduled.
46:41 DEBUG   opendrift:2068: ======================================================================
46:41 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.85903082818246
46:41 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.145424267707885
46:41 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   0.0
46:41 DEBUG   opendrift:2090: ---------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 03:00:00 (before)
                2025-04-14 04:00:00 (after)
46:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 03:00:00) in space  (linearNDFast)
46:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 04:00:00) in space  (linearNDFast)
46:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 03:00:00, weight 0.25) and
                      after (2025-04-14 04:00:00, weight 0.75) in time
46:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.85458666310282 degrees.
46:41 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.85458666310282 degrees.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:41 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:41 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:41 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:41 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:41 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:41 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:41 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:41 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.163133 (min) 0.483749 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.141385 (min) 0.111267 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.125439 (min) -0.0383219 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 6.229 (min) 9.03454 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.61769 (min) 3.98181 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.4425 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.4812 (min) 7.88525 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.7899 (min) 34.4389 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000417879 (min) 0.000402918 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:41 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:41 DEBUG   opendrift:698: No elements hit coastline.
46:41 DEBUG   opendrift:737: No elements hit seafloor.
46:41 DEBUG   opendrift:1699: No elements to deactivate
46:41 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:41 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:41 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:41 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
46:41 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3 0]
46:41 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0 3]
46:41 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 319.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 20.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:41 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:41 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:41 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06904639865699556
46:41 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:41 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:41 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:41 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:41 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:41 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:41 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:41 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:41 INFO    opendrift.models.chemicaldrift:1882: partitioning: [161, 0, 5, 334, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:41 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:41 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:41 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:41 DEBUG   opendrift:737: No elements hit seafloor.
46:41 DEBUG   opendrift:2059: ======================================================================
46:41 INFO    opendrift:2060: 2025-04-14 04:14:52.046155 - step 84 of 96 - 500 active elements (0 deactivated)
46:41 DEBUG   opendrift:2066: 0 elements scheduled.
46:41 DEBUG   opendrift:2068: ======================================================================
46:41 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.859359489070805
46:41 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.150917720777255
46:41 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.13226306193367465
46:41 DEBUG   opendrift:2090: ---------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:41 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:41 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:41 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:41 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 04:00:00 (before)
                2025-04-14 05:00:00 (after)
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:43 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:43 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 80x41x7) for time after (2025-04-14 05:00:00)
46:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 04:00:00) in space  (linearNDFast)
46:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:43 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 05:00:00) in space  (linearNDFast)
46:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:43 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 04:00:00, weight 0.75) and
                      after (2025-04-14 05:00:00, weight 0.25) in time
46:43 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84909322446701 degrees.
46:43 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84909322446701 degrees.
46:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:43 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:43 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:43 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:43 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:43 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:43 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:43 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:43 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:43 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:43 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:43 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:43 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:43 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:43 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:43 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:43 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:43 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:43 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:43 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:43 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.142753 (min) 0.44837 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.118447 (min) 0.13259 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.136085 (min) -0.0428769 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.98027 (min) 8.73523 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.18602 (min) 3.95129 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 65.0102 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.4812 (min) 7.87406 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6536 (min) 34.4595 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000377958 (min) 0.000356639 (max)
46:43 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:44 DEBUG   opendrift:698: No elements hit coastline.
46:44 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:44 DEBUG   opendrift:1699: No elements to deactivate
46:44 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:44 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:44 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:44 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:44 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:44 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:44 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 321.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 20.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:44 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:44 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:44 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.06526981866263624
46:44 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:44 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:44 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:44 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:44 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:44 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:44 INFO    opendrift.models.chemicaldrift:1882: partitioning: [159, 0, 5, 336, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:44 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:44 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:44 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:44 DEBUG   opendrift:737: No elements hit seafloor.
46:44 DEBUG   opendrift:2059: ======================================================================
46:44 INFO    opendrift:2060: 2025-04-14 04:44:52.046155 - step 85 of 96 - 500 active elements (0 deactivated)
46:44 DEBUG   opendrift:2066: 0 elements scheduled.
46:44 DEBUG   opendrift:2068: ======================================================================
46:44 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.85940776280682
46:44 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.153146905503634
46:44 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.030496298895997365
46:44 DEBUG   opendrift:2090: ---------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 04:00:00 (before)
                2025-04-14 05:00:00 (after)
46:44 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 04:00:00) in space  (linearNDFast)
46:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:44 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 05:00:00) in space  (linearNDFast)
46:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:44 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 04:00:00, weight 0.25) and
                      after (2025-04-14 05:00:00, weight 0.75) in time
46:44 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:44 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8468640366229 degrees.
46:44 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8468640366229 degrees.
46:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:44 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:44 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:44 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:44 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:44 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:44 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:44 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:44 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:44 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:44 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:44 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.146469 (min) 0.430084 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.108838 (min) 0.136991 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.158433 (min) -0.0653769 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 5.23288 (min) 8.31033 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.82577 (min) 3.69297 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 64.275 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.4812 (min) 7.86055 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.1108 (min) 34.4339 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000502927 (min) 0.000280103 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:44 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:44 DEBUG   opendrift:698: No elements hit coastline.
46:44 DEBUG   opendrift:742: Lifting 7 elements to seafloor.
46:44 DEBUG   opendrift:1699: No elements to deactivate
46:44 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:44 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:44 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:44 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
46:44 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 3 0]
46:44 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 0 3]
46:44 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 323.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 21.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:44 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:44 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:44 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.05908970661804685
46:44 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:44 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:44 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:44 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:44 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:44 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:44 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:44 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:44 INFO    opendrift.models.chemicaldrift:1882: partitioning: [158, 0, 5, 337, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:44 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:44 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:44 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:44 DEBUG   opendrift:737: No elements hit seafloor.
46:44 DEBUG   opendrift:2059: ======================================================================
46:44 INFO    opendrift:2060: 2025-04-14 05:14:52.046155 - step 86 of 96 - 500 active elements (0 deactivated)
46:44 DEBUG   opendrift:2066: 0 elements scheduled.
46:44 DEBUG   opendrift:2068: ======================================================================
46:44 DEBUG   opendrift:2079:                57.560323057589656 <- latitude  -> 57.859899702749885
46:44 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.154381169206527
46:44 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.04042690902131696
46:44 DEBUG   opendrift:2090: ---------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:44 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:44 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:44 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:44 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 05:00:00 (before)
                2025-04-14 06:00:00 (after)
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:46 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:46 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 80x41x7) for time after (2025-04-14 06:00:00)
46:46 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 05:00:00) in space  (linearNDFast)
46:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:46 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 06:00:00) in space  (linearNDFast)
46:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:46 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 05:00:00, weight 0.75) and
                      after (2025-04-14 06:00:00, weight 0.25) in time
46:46 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84562976806544 degrees.
46:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84562976806544 degrees.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:46 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:46 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.144015 (min) 0.427627 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0961084 (min) 0.15601 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.186668 (min) -0.0992075 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.85989 (min) 8.04977 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.68865 (min) 3.52091 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 63.3697 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48243 (min) 7.8477 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.1374 (min) 34.4072 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000628118 (min) 0.000227293 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:46 DEBUG   opendrift:698: No elements hit coastline.
46:46 DEBUG   opendrift:742: Lifting 10 elements to seafloor.
46:46 DEBUG   opendrift:1699: No elements to deactivate
46:46 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:46 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:46 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:46 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:46 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3]
46:46 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0]
46:46 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 323.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 22.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:46 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:46 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:46 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.055231721330768174
46:46 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:46 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:46 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:46 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:46 INFO    opendrift.models.chemicaldrift:1882: partitioning: [159, 0, 5, 336, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:46 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:46 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:46 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:46 DEBUG   opendrift:737: No elements hit seafloor.
46:46 DEBUG   opendrift:2059: ======================================================================
46:46 INFO    opendrift:2060: 2025-04-14 05:44:52.046155 - step 87 of 96 - 500 active elements (0 deactivated)
46:46 DEBUG   opendrift:2066: 0 elements scheduled.
46:46 DEBUG   opendrift:2068: ======================================================================
46:46 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.86059261722861
46:46 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.156135693118284
46:46 DEBUG   opendrift:2089:                -39.90262985229492   <- z ->   -0.2723791943261895
46:46 DEBUG   opendrift:2090: ---------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 05:00:00 (before)
                2025-04-14 06:00:00 (after)
46:46 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 05:00:00) in space  (linearNDFast)
46:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:46 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 06:00:00) in space  (linearNDFast)
46:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:46 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 05:00:00, weight 0.25) and
                      after (2025-04-14 06:00:00, weight 0.75) in time
46:46 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84387526324401 degrees.
46:46 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.84387526324401 degrees.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:46 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:46 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:46 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:46 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:46 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:46 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:46 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:46 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.133248 (min) 0.381826 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0389724 (min) 0.194013 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.221027 (min) -0.142884 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.96945 (min) 7.9333 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.8166 (min) 3.23676 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.4014 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48492 (min) 7.84753 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.6842 (min) 34.3991 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000753535 (min) 0.000189155 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:46 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:46 DEBUG   opendrift:698: No elements hit coastline.
46:46 DEBUG   opendrift:742: Lifting 10 elements to seafloor.
46:46 DEBUG   opendrift:1699: No elements to deactivate
46:46 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:46 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:46 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:46 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:46 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 3]
46:46 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 0]
46:46 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 323.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 24.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:46 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:46 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:46 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.052706928650999484
46:46 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:46 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:46 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:46 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:46 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:46 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:46 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:46 INFO    opendrift.models.chemicaldrift:1882: partitioning: [161, 0, 5, 334, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:46 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:46 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:46 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:46 DEBUG   opendrift:737: No elements hit seafloor.
46:46 DEBUG   opendrift:2059: ======================================================================
46:46 INFO    opendrift:2060: 2025-04-14 06:14:52.046155 - step 88 of 96 - 500 active elements (0 deactivated)
46:46 DEBUG   opendrift:2066: 0 elements scheduled.
46:46 DEBUG   opendrift:2068: ======================================================================
46:46 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.86166324960662
46:46 DEBUG   opendrift:2084:                10.512965885539497 <- longitude -> 11.15580866797322
46:46 DEBUG   opendrift:2089:                -39.98023090625999   <- z ->   -0.323182996186534
46:46 DEBUG   opendrift:2090: ---------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:46 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:46 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:46 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:46 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 06:00:00 (before)
                2025-04-14 07:00:00 (after)
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:48 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:48 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 81x41x7) for time after (2025-04-14 07:00:00)
46:48 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 06:00:00) in space  (linearNDFast)
46:48 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:48 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 07:00:00) in space  (linearNDFast)
46:48 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:48 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 06:00:00, weight 0.75) and
                      after (2025-04-14 07:00:00, weight 0.25) in time
46:48 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:48 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.844202267019135 degrees.
46:48 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.844202267019135 degrees.
46:48 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:48 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:48 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:48 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:48 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:48 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:48 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:48 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:48 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:48 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:48 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:48 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:48 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:48 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:48 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:48 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:48 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:48 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:48 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:48 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:48 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.123808 (min) 0.352089 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0304846 (min) 0.270662 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.257101 (min) -0.184284 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.54329 (min) 7.39096 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.25286 (min) 3.3682 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 61.5703 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48725 (min) 7.84893 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.7581 (min) 34.4224 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000864517 (min) 0.000158702 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:48 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:48 DEBUG   opendrift:698: No elements hit coastline.
46:48 DEBUG   opendrift:742: Lifting 9 elements to seafloor.
46:48 DEBUG   opendrift:1699: No elements to deactivate
46:48 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:48 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:48 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:48 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:48 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:48 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:48 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 325.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 24.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:48 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:48 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:48 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:48 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:48 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.047166609675546124
46:48 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:48 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:48 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:48 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:48 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:48 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:48 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:48 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:48 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:48 INFO    opendrift.models.chemicaldrift:1882: partitioning: [159, 0, 5, 336, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:48 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:48 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:48 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:48 DEBUG   opendrift:737: No elements hit seafloor.
46:48 DEBUG   opendrift:2059: ======================================================================
46:48 INFO    opendrift:2060: 2025-04-14 06:44:52.046155 - step 89 of 96 - 500 active elements (0 deactivated)
46:48 DEBUG   opendrift:2066: 0 elements scheduled.
46:48 DEBUG   opendrift:2068: ======================================================================
46:48 DEBUG   opendrift:2079:                57.560323057589656 <- latitude  -> 57.8630397288827
46:48 DEBUG   opendrift:2084:                10.5129658855395 <- longitude -> 11.157805029332305
46:48 DEBUG   opendrift:2089:                -40.34962575673701   <- z ->   -0.5651968721599396
46:48 DEBUG   opendrift:2090: ---------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:48 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:48 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:48 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:48 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:48 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 06:00:00 (before)
                2025-04-14 07:00:00 (after)
46:48 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 06:00:00) in space  (linearNDFast)
46:48 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:48 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 07:00:00) in space  (linearNDFast)
46:48 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:48 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 06:00:00, weight 0.25) and
                      after (2025-04-14 07:00:00, weight 0.75) in time
46:48 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:48 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8422058999303 degrees.
46:49 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.8422058999303 degrees.
46:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:49 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:49 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:49 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:49 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:49 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:49 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:49 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:49 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.10749 (min) 0.339805 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0425126 (min) 0.278795 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.297003 (min) -0.228884 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 4.03983 (min) 6.45818 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.95765 (min) 4.03531 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 60.7179 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.48942 (min) 7.8519 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.2089 (min) 34.3672 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00120646 (min) 0.000219075 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:49 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:49 DEBUG   opendrift:698: No elements hit coastline.
46:49 DEBUG   opendrift:742: Lifting 12 elements to seafloor.
46:49 DEBUG   opendrift:1699: No elements to deactivate
46:49 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:49 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:49 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:49 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 1
46:49 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0]
46:49 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3]
46:49 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 326.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 24.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:49 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:49 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:49 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.041220189215405115
46:49 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:49 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:49 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:49 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:49 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:49 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:49 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:49 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:49 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:49 INFO    opendrift.models.chemicaldrift:1882: partitioning: [158, 0, 5, 337, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:49 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:49 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:49 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:49 DEBUG   opendrift:737: No elements hit seafloor.
46:49 DEBUG   opendrift:2059: ======================================================================
46:49 INFO    opendrift:2060: 2025-04-14 07:14:52.046155 - step 90 of 96 - 500 active elements (0 deactivated)
46:49 DEBUG   opendrift:2066: 0 elements scheduled.
46:49 DEBUG   opendrift:2068: ======================================================================
46:49 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.86479851983571
46:49 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 11.163347925313925
46:49 DEBUG   opendrift:2089:                -40.38333768651107   <- z ->   -0.32398961061711706
46:49 DEBUG   opendrift:2090: ---------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:49 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:49 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:49 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:49 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 07:00:00 (before)
                2025-04-14 08:00:00 (after)
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:51 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:51 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 82x41x7) for time after (2025-04-14 08:00:00)
46:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 07:00:00) in space  (linearNDFast)
46:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 08:00:00) in space  (linearNDFast)
46:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 07:00:00, weight 0.75) and
                      after (2025-04-14 08:00:00, weight 0.25) in time
46:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.83666300373198 degrees.
46:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.83666300373198 degrees.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:51 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:51 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0982104 (min) 0.321488 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0468289 (min) 0.294715 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.336078 (min) -0.27013 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.85569 (min) 5.83361 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 3.12634 (min) 4.61927 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 59.9448 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.49192 (min) 7.85562 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.677 (min) 34.4057 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00121753 (min) 0.000170027 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:51 DEBUG   opendrift:698: No elements hit coastline.
46:51 DEBUG   opendrift:742: Lifting 16 elements to seafloor.
46:51 DEBUG   opendrift:1699: No elements to deactivate
46:51 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:51 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:51 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:51 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:51 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:51 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.0375748892894475
46:51 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:51 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:51 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 3 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:51 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:51 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:51 INFO    opendrift.models.chemicaldrift:1882: partitioning: [158, 0, 5, 337, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:51 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:51 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:51 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:51 DEBUG   opendrift:737: No elements hit seafloor.
46:51 DEBUG   opendrift:2059: ======================================================================
46:51 INFO    opendrift:2060: 2025-04-14 07:44:52.046155 - step 91 of 96 - 500 active elements (0 deactivated)
46:51 DEBUG   opendrift:2066: 0 elements scheduled.
46:51 DEBUG   opendrift:2068: ======================================================================
46:51 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.86699776561959
46:51 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 11.168532548792953
46:51 DEBUG   opendrift:2089:                -40.6192072453632   <- z ->   -0.06652061979541235
46:51 DEBUG   opendrift:2090: ---------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 07:00:00 (before)
                2025-04-14 08:00:00 (after)
46:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 07:00:00) in space  (linearNDFast)
46:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 08:00:00) in space  (linearNDFast)
46:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 07:00:00, weight 0.25) and
                      after (2025-04-14 08:00:00, weight 0.75) in time
46:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.831478377693 degrees.
46:51 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.831478377693 degrees.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:51 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:51 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:51 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:51 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:51 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:51 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:51 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:51 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0901759 (min) 0.340512 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0338683 (min) 0.316716 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.372859 (min) -0.307908 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.92875 (min) 5.42951 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.74939 (min) 4.62125 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 59.8561 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.49475 (min) 7.86011 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8526 (min) 34.4066 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.00110406 (min) 0.000103376 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:51 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:51 DEBUG   opendrift:698: No elements hit coastline.
46:51 DEBUG   opendrift:742: Lifting 16 elements to seafloor.
46:51 DEBUG   opendrift:1699: No elements to deactivate
46:51 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:51 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:51 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:51 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 3
46:51 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0 0]
46:51 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3 3]
46:51 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 329.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 24.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:51 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:51 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:51 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.03491626048992515
46:51 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:51 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:51 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:51 DEBUG   opendrift.models.oceandrift:534: 3 elements reached seafloor, interacting with bottom
46:51 DEBUG   opendrift:742: Lifting 3 elements to seafloor.
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:51 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:51 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:51 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:51 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:51 INFO    opendrift.models.chemicaldrift:1882: partitioning: [155, 0, 5, 340, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:51 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:51 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:51 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:51 DEBUG   opendrift:737: No elements hit seafloor.
46:51 DEBUG   opendrift:2059: ======================================================================
46:51 INFO    opendrift:2060: 2025-04-14 08:14:52.046155 - step 92 of 96 - 500 active elements (0 deactivated)
46:51 DEBUG   opendrift:2066: 0 elements scheduled.
46:51 DEBUG   opendrift:2068: ======================================================================
46:51 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.86937715624771
46:51 DEBUG   opendrift:2084:                10.512965885539508 <- longitude -> 11.173293609739533
46:51 DEBUG   opendrift:2089:                -40.891097347796865   <- z ->   -0.6097398107524579
46:51 DEBUG   opendrift:2090: ---------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:51 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:51 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:51 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:51 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 08:00:00 (before)
                2025-04-14 09:00:00 (after)
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:53 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:53 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 83x41x7) for time after (2025-04-14 09:00:00)
46:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 08:00:00) in space  (linearNDFast)
46:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 09:00:00) in space  (linearNDFast)
46:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 08:00:00, weight 0.75) and
                      after (2025-04-14 09:00:00, weight 0.25) in time
46:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:53 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.82671731169941 degrees.
46:53 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.82671731169941 degrees.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:53 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:53 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:53 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:53 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:53 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:53 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:53 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0915568 (min) 0.362503 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0501168 (min) 0.376802 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.408589 (min) -0.342575 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.73706 (min) 5.03894 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.37352 (min) 4.54288 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 60.419 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.49725 (min) 7.85929 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8704 (min) 34.4215 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000939118 (min) 0.000127251 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:53 DEBUG   opendrift:698: No elements hit coastline.
46:53 DEBUG   opendrift:742: Lifting 19 elements to seafloor.
46:53 DEBUG   opendrift:1699: No elements to deactivate
46:53 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:53 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:53 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:53 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:53 DEBUG   opendrift.models.chemicaldrift:1473: old species: [3 0]
46:53 DEBUG   opendrift.models.chemicaldrift:1474: new species: [0 3]
46:53 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 330.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 25.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:53 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:53 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:53 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:53 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:53 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.031214812165208338
46:53 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:53 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:53 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:53 DEBUG   opendrift.models.oceandrift:534: 1 elements reached seafloor, interacting with bottom
46:53 DEBUG   opendrift:742: Lifting 1 elements to seafloor.
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 2 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:53 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:53 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:53 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:53 INFO    opendrift.models.chemicaldrift:1882: partitioning: [155, 0, 5, 340, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:53 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:53 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:53 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:53 DEBUG   opendrift:737: No elements hit seafloor.
46:53 DEBUG   opendrift:2059: ======================================================================
46:53 INFO    opendrift:2060: 2025-04-14 08:44:52.046155 - step 93 of 96 - 500 active elements (0 deactivated)
46:53 DEBUG   opendrift:2066: 0 elements scheduled.
46:53 DEBUG   opendrift:2068: ======================================================================
46:53 DEBUG   opendrift:2079:                57.56032305758965 <- latitude  -> 57.87201492034017
46:53 DEBUG   opendrift:2084:                10.512965885539504 <- longitude -> 11.177536151080114
46:53 DEBUG   opendrift:2089:                -41.567786607324784   <- z ->   -0.29642843143775865
46:53 DEBUG   opendrift:2090: ---------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 08:00:00 (before)
                2025-04-14 09:00:00 (after)
46:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 08:00:00) in space  (linearNDFast)
46:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 09:00:00) in space  (linearNDFast)
46:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 08:00:00, weight 0.25) and
                      after (2025-04-14 09:00:00, weight 0.75) in time
46:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:53 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.82247476466486 degrees.
46:53 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.82247476466486 degrees.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:53 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:53 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:53 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:53 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:53 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:53 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:53 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:53 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:53 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:53 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:53 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.0976205 (min) 0.427075 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0599948 (min) 0.401843 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.443809 (min) -0.374286 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.52404 (min) 5.05559 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 2.04745 (min) 4.39315 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 61.0064 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.49942 (min) 7.82572 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.3216 (min) 34.4239 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000721769 (min) 0.000153554 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:53 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:53 DEBUG   opendrift:698: No elements hit coastline.
46:53 DEBUG   opendrift:742: Lifting 21 elements to seafloor.
46:53 DEBUG   opendrift:1699: No elements to deactivate
46:53 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:53 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:53 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:53 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:53 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:53 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:53 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 332.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 25.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:53 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:53 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:53 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:53 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:53 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.02624297277921695
46:53 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:53 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:53 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:53 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:53 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:53 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:53 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:53 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:53 INFO    opendrift.models.chemicaldrift:1882: partitioning: [153, 0, 5, 342, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:53 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:53 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:53 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:53 DEBUG   opendrift:737: No elements hit seafloor.
46:53 DEBUG   opendrift:2059: ======================================================================
46:53 INFO    opendrift:2060: 2025-04-14 09:14:52.046155 - step 94 of 96 - 500 active elements (0 deactivated)
46:53 DEBUG   opendrift:2066: 0 elements scheduled.
46:53 DEBUG   opendrift:2068: ======================================================================
46:53 DEBUG   opendrift:2079:                57.56032305758964 <- latitude  -> 57.87416076188113
46:53 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 11.180601590287676
46:53 DEBUG   opendrift:2089:                -42.732060585408206   <- z ->   -0.19588754816029996
46:53 DEBUG   opendrift:2090: ---------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:53 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:53 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:53 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:53 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 09:00:00 (before)
                2025-04-14 10:00:00 (after)
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:56 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:56 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 84x41x7) for time after (2025-04-14 10:00:00)
46:56 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 09:00:00) in space  (linearNDFast)
46:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:56 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 10:00:00) in space  (linearNDFast)
46:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:56 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 09:00:00, weight 0.75) and
                      after (2025-04-14 10:00:00, weight 0.25) in time
46:56 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81940933686285 degrees.
46:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81940933686285 degrees.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:56 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:56 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.103993 (min) 0.447505 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0685158 (min) 0.420798 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.47597 (min) -0.403543 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 3.29866 (min) 4.90874 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.88368 (min) 4.14081 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 61.5786 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.50251 (min) 7.82826 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 28.3536 (min) 34.4259 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000676128 (min) 9.03695e-05 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:56 DEBUG   opendrift:698: No elements hit coastline.
46:56 DEBUG   opendrift:742: Lifting 36 elements to seafloor.
46:56 DEBUG   opendrift:1699: No elements to deactivate
46:56 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:56 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:56 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:56 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:56 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:56 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.022761570820059935
46:56 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:56 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:56 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:56 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:56 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:56 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:56 INFO    opendrift.models.chemicaldrift:1882: partitioning: [153, 0, 5, 342, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:56 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:56 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:56 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:56 DEBUG   opendrift:737: No elements hit seafloor.
46:56 DEBUG   opendrift:2059: ======================================================================
46:56 INFO    opendrift:2060: 2025-04-14 09:44:52.046155 - step 95 of 96 - 500 active elements (0 deactivated)
46:56 DEBUG   opendrift:2066: 0 elements scheduled.
46:56 DEBUG   opendrift:2068: ======================================================================
46:56 DEBUG   opendrift:2079:                57.56032305758964 <- latitude  -> 57.8766402450296
46:56 DEBUG   opendrift:2084:                10.512965885539499 <- longitude -> 11.18353193560671
46:56 DEBUG   opendrift:2089:                -43.65291223700892   <- z ->   -0.4235527014970863
46:56 DEBUG   opendrift:2090: ---------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 09:00:00 (before)
                2025-04-14 10:00:00 (after)
46:56 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 09:00:00) in space  (linearNDFast)
46:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:56 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 10:00:00) in space  (linearNDFast)
46:56 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:56 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 09:00:00, weight 0.25) and
                      after (2025-04-14 10:00:00, weight 0.75) in time
46:56 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81647897876621 degrees.
46:56 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81647897876621 degrees.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:56 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:56 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:56 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:56 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:56 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:56 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:56 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:56 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.110547 (min) 0.414198 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0706227 (min) 0.442621 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.504996 (min) -0.430285 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 2.87644 (min) 4.8156 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.9853 (min) 3.76638 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.1567 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.50749 (min) 7.93397 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.88 (min) 34.4334 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000805257 (min) 0.000121771 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:56 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:56 DEBUG   opendrift:698: No elements hit coastline.
46:56 DEBUG   opendrift:742: Lifting 46 elements to seafloor.
46:56 DEBUG   opendrift:1699: No elements to deactivate
46:56 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:56 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:56 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:56 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 2
46:56 DEBUG   opendrift.models.chemicaldrift:1473: old species: [0 0]
46:56 DEBUG   opendrift.models.chemicaldrift:1474: new species: [3 3]
46:56 DEBUG   opendrift.models.chemicaldrift:1481: Number of transformations total:
 [[  0.   0.   0. 334.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  35.   0.]
 [ 25.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
46:56 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:56 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:56 DEBUG   opendrift.models.chemicaldrift:1525: Adding uncertainty for desorption from sediments: 0.5 m
46:56 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:56 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.021739335628301434
46:56 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:56 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:56 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:56 DEBUG   opendrift.models.oceandrift:534: 2 elements reached seafloor, interacting with bottom
46:56 DEBUG   opendrift:742: Lifting 2 elements to seafloor.
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:56 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:56 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:56 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:56 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:56 INFO    opendrift.models.chemicaldrift:1882: partitioning: [151, 0, 5, 344, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:56 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:56 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:56 DEBUG   opendrift:878: to be seeded: 0, already seeded 500
46:56 DEBUG   opendrift:737: No elements hit seafloor.
46:56 DEBUG   opendrift:2059: ======================================================================
46:56 INFO    opendrift:2060: 2025-04-14 10:14:52.046155 - step 96 of 96 - 500 active elements (0 deactivated)
46:56 DEBUG   opendrift:2066: 0 elements scheduled.
46:56 DEBUG   opendrift:2068: ======================================================================
46:56 DEBUG   opendrift:2079:                57.560323057589635 <- latitude  -> 57.8791313748935
46:56 DEBUG   opendrift:2084:                10.512965885539503 <- longitude -> 11.186359950389647
46:56 DEBUG   opendrift:2089:                -44.93460896679164   <- z ->   -0.38339807531115
46:56 DEBUG   opendrift:2090: ---------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
46:56 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:597: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
46:56 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:56 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:56 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
46:56 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-04-14 10:00:00 (before)
                2025-04-14 11:00:00 (after)
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking sea_floor_depth_below_sea_level for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking x_wind for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking y_wind for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking x_sea_water_velocity for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking y_sea_water_velocity for invalid values
46:58 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['y_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'upward_sea_water_velocity', 'x_sea_water_velocity']
46:58 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 85x41x7) for time after (2025-04-14 11:00:00)
46:58 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-04-14 10:00:00) in space  (linearNDFast)
46:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:58 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-04-14 11:00:00) in space  (linearNDFast)
46:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
46:58 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-04-14 10:00:00, weight 0.75) and
                      after (2025-04-14 11:00:00, weight 0.25) in time
46:58 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
46:58 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81365097144206 degrees.
46:58 DEBUG   opendrift.readers.basereader.variables:100: Rotating vectors between -59.487045189474216 and -58.81365097144206 degrees.
46:58 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:58 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['ocean_mixed_layer_thickness']
46:58 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:597: Calling reader constant_reader
46:58 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:58 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from constant_reader covering 500 elements
46:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:58 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:58 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:58 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:58 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:58 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:58 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:58 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:58 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:58 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
46:58 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 10 for sea_water_temperature for 0 profiles
46:58 DEBUG   opendrift.models.basemodel.environment:798:       Using fallback value 34 for sea_water_salinity for 0 profiles
46:58 DEBUG   opendrift.models.basemodel.environment:787:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
46:58 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:58 DEBUG   opendrift.models.basemodel.environment:889:     x_sea_water_velocity: -0.115827 (min) 0.408874 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     y_sea_water_velocity: -0.0699919 (min) 0.464512 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     sea_surface_height: -0.52398 (min) -0.448581 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     x_wind: 2.45346 (min) 4.51589 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     y_wind: 1.90458 (min) 3.57884 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     sea_floor_depth_below_sea_level: 9.35757 (min) 62.7524 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_temperature: 6.51248 (min) 7.95121 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_salinity: 27.8915 (min) 34.4533 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     upward_sea_water_velocity: -0.000906212 (min) 0.000135554 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     spm: 1 (min) 1 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     doc: 0 (min) 0 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:889:     pH_sediment: 6.9 (min) 6.9 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:58 DEBUG   opendrift:698: No elements hit coastline.
46:58 DEBUG   opendrift:742: Lifting 48 elements to seafloor.
46:58 DEBUG   opendrift:1699: No elements to deactivate
46:58 DEBUG   opendrift:2133: Calling ChemicalDrift.update()
46:58 DEBUG   opendrift.models.chemicaldrift:1688: Calculating overall degradation using overall rate constants
46:58 DEBUG   opendrift.models.chemicaldrift:1743: Calculating: volatilization
46:58 INFO    opendrift.models.chemicaldrift:1456: Number of transformations: 0
46:58 DEBUG   opendrift.models.oceandrift:428: Using functional expression for diffusivity
46:58 DEBUG   opendrift.models.oceandrift:433: Diffusivities are in range 0.0 to 0.01894757150487261
46:58 DEBUG   opendrift.models.oceandrift:452: TSprofiles deactivated for vertical mixing
46:58 DEBUG   opendrift.models.oceandrift:466: Vertical mixing module:windspeed_Large1994
46:58 DEBUG   opendrift.models.oceandrift:469: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
46:58 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:58 DEBUG   opendrift.models.oceandrift:516: 1 elements penetrated seafloor, lifting up
46:58 INFO    opendrift.models.chemicaldrift:1654: Number of resuspended particles: 0
46:58 DEBUG   opendrift.models.chemicaldrift:1659: Adding uncertainty for resuspension from sediments: 0.5 m
46:58 DEBUG   opendrift.models.chemicaldrift:1560: Updated particle diameter for 0 elements
46:58 DEBUG   opendrift.models.chemicaldrift:1564: Adding uncertainty for particle diameter: 5e-06 m
46:58 INFO    opendrift.models.chemicaldrift:1882: partitioning: [151, 0, 5, 344, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
46:58 DEBUG   opendrift:1650: Horizontal diffusivity is 0, no random walk.
46:58 DEBUG   opendrift:2148: 500 active elements (0 deactivated)
46:58 DEBUG   opendrift:2177: Cleaning up
46:58 DEBUG   opendrift.models.basemodel.environment:591: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:592: Variable group ['land_binary_mask']
46:58 DEBUG   opendrift.models.basemodel.environment:593: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:597: Calling reader global_landmask
46:58 DEBUG   opendrift.models.basemodel.environment:598: ----------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:614: Data needed for 500 elements
46:58 DEBUG   opendrift.readers.basereader.variables:759: Fetching variables from global_landmask covering 500 elements
46:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
46:58 DEBUG   opendrift.readers.basereader.variables:637: Checking land_binary_mask for invalid values
46:58 DEBUG   opendrift.readers.basereader.variables:795: Reader projection is latlon - rotation of vectors is not needed.
46:58 DEBUG   opendrift.models.basemodel.environment:748: Obtained data for all elements.
46:58 DEBUG   opendrift.models.basemodel.environment:761: ---------------------------------------
46:58 DEBUG   opendrift.models.basemodel.environment:762: Finished processing all variable groups
46:58 DEBUG   opendrift.models.basemodel.environment:887: ------------ SUMMARY -------------
46:58 DEBUG   opendrift.models.basemodel.environment:889:     land_binary_mask: 0 (min) 0 (max)
46:58 DEBUG   opendrift.models.basemodel.environment:891: ---------------------------------
46:58 DEBUG   opendrift:698: No elements hit coastline.
46:58 DEBUG   opendrift:2263: Updating minval and maxval
46:58 DEBUG   opendrift:2343: Writing to file
46:58 DEBUG   opendrift:1699: No elements to deactivate
46:58 DEBUG   opendrift:100: Changed mode from Mode.Run to Mode.Result

Print and plot results

print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int32(item)) for item in o.ntransformations[isp,:]]) )

m_pre = o.result.mass.isel(time=-1).sum()
m_deg = o.result.mass_degraded.isel(time=-1).sum()
m_vol = o.result.mass_volatilized.isel(time=-1).sum()
m_tot = m_pre + m_deg + m_vol

print('Mass budget for target chemical:')
print('mass preserved       : {:.3f}'.format(m_pre * 1e-6),' g   {:.3f}'.format(m_pre/m_tot*100),'%')
print('mass degraded        : {:.3f}'.format(m_deg * 1e-6),' g   {:.3f}'.format(m_deg/m_tot*100),'%')
print('mass volatilized     : {:.3f}'.format(m_vol * 1e-6),' g   {:.3f}'.format(m_vol/m_tot*100),'%')

legend=['dissolved', '', 'SPM', 'sediment', '']

o.animation_profile(color='specie',
            markersize='mass',
            markersize_scaling=30,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            legend = legend,
            legend_loc = 3,
            fps = 10
            )

Final speciation:
LMM                             :    151
Humic colloid                   :      0
Particle reversible             :      5
Sediment reversible             :    344
Sediment slowly reversible      :      0
Number of transformations:
['        0', '        0', '        0', '      334', '        0']
['        0', '        0', '        0', '        0', '        0']
['       11', '        0', '        0', '       35', '        0']
['       25', '        0', '        0', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
Mass budget for target chemical:
mass preserved       : 0.360  g   36.048 %
mass degraded        : 0.637  g   63.698 %
mass volatilized     : 0.003  g   0.253 %
10:46:58 DEBUG   opendrift:3050: Saving animation..
10:46:58 INFO    opendrift:4607: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_0.gif...
10:47:09 DEBUG   opendrift:4645: MPLBACKEND = agg
10:47:09 DEBUG   opendrift:4646: DISPLAY = None
10:47:09 DEBUG   opendrift:4647: Time to save animation: 0:00:10.903493
10:47:09 INFO    opendrift:3253: Time to make animation: 0:00:11.007089

o.animation(color='specie',
            markersize='mass',
            markersize_scaling=100,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            fast = True,
            legend = legend,
            legend_loc = 3,
            fps=10
            )

47:09 DEBUG   opendrift:2405: Setting up map: corners=None, fast=True, lscale=None
47:09 WARNING opendrift:2436: Plotting fast. This will make your plots less accurate.
47:10 DEBUG   opendrift:3050: Saving animation..
47:10 INFO    opendrift:4607: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_1.gif...
48:15 DEBUG   opendrift:4645: MPLBACKEND = agg
48:15 DEBUG   opendrift:4646: DISPLAY = None
48:15 DEBUG   opendrift:4647: Time to save animation: 0:01:05.129829
48:15 INFO    opendrift:3043: Time to make animation: 0:01:06.401094

o.plot_mass(legend = legend,
            time_unit = 'hours',
            title = 'Chemical mass budget')

dissolved : 0.067324109375g (18.676143507394766%)
SPM : 0.01g (2.774064696996932%)
sediment : 0.28315775g (78.5497917956083%)
/root/project/opendrift/models/chemicaldrift.py:3031: UserWarning: set_ticklabels() should only be used with a fixed number of ticks, i.e. after set_ticks() or using a FixedLocator.
  ax.axes.get_xaxis().set_ticklabels(np.round(ax.axes.get_xticks() * time_conversion_factor))

Total running time of the script: (3 minutes 34.109 seconds)

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