ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

20:13:48 DEBUG   opendrift.config:168: Adding 18 config items from __init__
20:13:48 DEBUG   opendrift.config:178:   Overwriting config item readers:max_number_of_fails
20:13:48 DEBUG   opendrift.config:168: Adding 13 config items from __init__
20:13:48 INFO    opendrift.models.basemodel:515: OpenDriftSimulation initialised (version 1.12.0 / v1.12.0-26-g390e945)
20:13:48 DEBUG   opendrift.config:168: Adding 15 config items from oceandrift
20:13:48 DEBUG   opendrift.config:178:   Overwriting config item seed:z
20:13:48 DEBUG   opendrift.config:168: Adding 71 config items from chemicaldrift
20:13:48 INFO    opendrift.readers:58: Opening file with xr.open_dataset
20:13:52 DEBUG   opendrift.readers.reader_netCDF_CF_generic:128: Finding coordinate variables.
20:13:52 DEBUG   opendrift.readers.reader_netCDF_CF_generic:143: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
20:13:52 INFO    opendrift.readers.reader_netCDF_CF_generic:337: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
20:13:52 DEBUG   opendrift.readers.reader_netCDF_CF_generic:373: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
20:13:52 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
20:13:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
20:13:52 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
20:13:52 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
20:13:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
20:13:52 DEBUG   opendrift.models.basemodel.environment:328: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
20:13:52 DEBUG   opendrift.models.basemodel.environment:328: Added reader constant_reader
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:sea_surface_height [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_surface_height [0] float min: None, max: None [None] Fallback value for s...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: -20, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: -20, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:max_speed                     [2.0] float min: 0, max: inf [seconds] Typical maximum spee...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
general:simulation_name             [] str   min length 0, max length 64 Name of simulation...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:coastline_approximation_precision [0.001] float min: 0.0001, max: 0.005 [degrees] The precision of the...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:profiles_depth                [50] float min: 0, max: None [meters] Environment profiles...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

13:52 DEBUG   opendrift.models.chemicaldrift:870: Partitioning coefficients (Tref,freshwater)
13:52 DEBUG   opendrift.models.chemicaldrift:871: KOC_sed: 12953.922406542462 L/KgOC
13:52 DEBUG   opendrift.models.chemicaldrift:872: KOC_SPM: 12953.922406542462 L/KgOC
13:52 DEBUG   opendrift.models.chemicaldrift:873: KOC_DOM: 3004.29439651874 L/KgOC
13:52 DEBUG   opendrift.models.chemicaldrift:885: Kd_sed: 647.6961203271231 L/Kg
13:52 DEBUG   opendrift.models.chemicaldrift:886: Kd_SPM: 647.6961203271231 L/Kg
13:52 DEBUG   opendrift.models.chemicaldrift:887: Kd_DOM: 1580.2588525688573 L/Kg
13:52 DEBUG   opendrift.models.chemicaldrift:1104: nspecies: 5
13:52 DEBUG   opendrift.models.chemicaldrift:1105: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
13:52 DEBUG   opendrift.models.chemicaldrift:509: Initial partitioning:
13:52 DEBUG   opendrift.models.chemicaldrift:511:       449   0 LMM
13:52 DEBUG   opendrift.models.chemicaldrift:511:         0   1 Humic colloid
13:52 DEBUG   opendrift.models.chemicaldrift:511:        51   2 Particle reversible
13:52 DEBUG   opendrift.models.chemicaldrift:511:         0   3 Sediment reversible
13:52 DEBUG   opendrift.models.chemicaldrift:511:         0   4 Sediment slowly reversible
13:52 INFO    opendrift.models.basemodel.environment:218: Adding a dynamical landmask with max. priority based on assumed maximum speed of 2.0 m/s. Adding a customised landmask may be faster...
13:52 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
13:56 DEBUG   opendrift.models.basemodel.environment:328: Added reader global_landmask
13:56 INFO    opendrift.models.basemodel.environment:245: Fallback values will be used for the following variables which have no readers:
13:56 INFO    opendrift.models.basemodel.environment:248:    ocean_vertical_diffusivity: 0.000100
13:56 INFO    opendrift.models.basemodel.environment:248:    spm: 1.000000
13:56 INFO    opendrift.models.basemodel.environment:248:    active_sediment_layer_thickness: 0.030000
13:56 INFO    opendrift.models.basemodel.environment:248:    doc: 0.000000
13:56 INFO    opendrift.models.basemodel.environment:248:    sea_water_ph_reported_on_total_scale: 8.100000
13:56 INFO    opendrift.models.basemodel.environment:248:    pH_sediment: 6.900000
13:56 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Config to Mode.Ready

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

13:56 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Ready to Mode.Run
13:56 DEBUG   opendrift.models.basemodel:1777:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.12.0
  Platform: Linux, 5.15.0-1057-aws
5677490234375 GB memory
processors (x86_64)
  NumPy version 1.26.4
  SciPy version 1.14.1
  Matplotlib version 3.9.1
  NetCDF4 version 1.6.1
  Xarray version 2024.11.0
  ADIOS (adios_db) version 1.2.5
  Copernicusmarine version 1.3.5
  Python version 3.11.6 | packaged by conda-forge | (main, Oct  3 2023, 10:40:35) [GCC 12.3.0]
------------------------------------------------------

13:56 DEBUG   opendrift.models.basemodel:1791: No output file is specified, neglecting export_buffer_length
13:56 DEBUG   opendrift.models.basemodel:1909: Finalizing environment and preparing readers for simulation coverage ([4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]) and time (2024-12-02 20:13:52.626553 to 2024-12-04 20:13:52.626553)
13:56 DEBUG   opendrift.models.basemodel.environment:180:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
13:56 DEBUG   opendrift.readers.basereader.structured:153: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
13:56 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 11 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 2 m/s and time span of 1:00:00
13:56 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:56 DEBUG   opendrift.models.basemodel.environment:180:    Preparing constant_reader for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
13:56 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for constant_reader
13:56 DEBUG   opendrift.models.basemodel.environment:180:    Preparing global_landmask for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
13:56 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for global_landmask
13:56 INFO    opendrift.models.basemodel:935: Using existing reader for land_binary_mask
13:56 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
13:56 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
13:56 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
13:56 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
13:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
13:56 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
13:56 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
13:56 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
13:56 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
13:56 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
13:56 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
13:56 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
13:56 INFO    opendrift.models.basemodel:946: All points are in ocean
13:56 INFO    opendrift.models.chemicaldrift:352: Number of species: 5
13:56 INFO    opendrift.models.chemicaldrift:354:   0 LMM
13:56 INFO    opendrift.models.chemicaldrift:354:   1 Humic colloid
13:56 INFO    opendrift.models.chemicaldrift:354:   2 Particle reversible
13:56 INFO    opendrift.models.chemicaldrift:354:   3 Sediment reversible
13:56 INFO    opendrift.models.chemicaldrift:354:   4 Sediment slowly reversible
13:56 INFO    opendrift.models.chemicaldrift:357: transfer setup: organics
13:56 INFO    opendrift.models.chemicaldrift:359: nspecies: 5
13:56 INFO    opendrift.models.chemicaldrift:360: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
13:56 DEBUG   opendrift.models.basemodel:890: to be seeded: 500, already seeded 0
13:56 DEBUG   opendrift.models.basemodel:908: Released 500 new elements.
13:56 WARNING opendrift.models.basemodel:729: Seafloor check not being run because environment is missing. This will happen the first time the function is run but if it happens subsequently there is probably a problem.
13:56 DEBUG   opendrift.models.basemodel:2034: ======================================================================
13:56 INFO    opendrift.models.basemodel:2035: 2024-12-02 20:13:52.626553 - step 1 of 96 - 500 active elements (0 deactivated)
13:56 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
13:56 DEBUG   opendrift.models.basemodel:2043: ======================================================================
13:56 DEBUG   opendrift.models.basemodel:2054:               57.546223 <- latitude  -> 57.64813
13:56 DEBUG   opendrift.models.basemodel:2059:               10.507113 <- longitude -> 10.70608
13:56 DEBUG   opendrift.models.basemodel:2064:               -9.98847   <- z ->   -0.046954762
13:56 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
13:56 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:56 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
13:56 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
13:56 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
13:56 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 20:00:00 (before)
                2024-12-02 21:00:00 (after)
13:59 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
13:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
13:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
13:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
13:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
13:59 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
13:59 DEBUG   opendrift.readers.basereader.structured:291: Fetched env-block (size 36x35x7) for time before (2024-12-02 20:00:00)
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:01 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:01 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-02 21:00:00)
14:01 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 20:00:00) in space  (linearNDFast)
14:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:01 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 21:00:00) in space  (linearNDFast)
14:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:01 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 20:00:00, weight 0.77) and
                      after (2024-12-02 21:00:00, weight 0.23) in time
14:01 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
14:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
14:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:01 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:01 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:01 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:01 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0972135 (min) 0.141998 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0116287 (min) 0.104487 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.167199 (min) -0.150056 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.88493 (min) 5.5201 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.19144 (min) 6.29138 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.25825 (min) 10.2918 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.7495 (min) 32.3432 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.40634e-05 (min) 0.000115093 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:01 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:01 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:01 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:02 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:02 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
14:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
14:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
14:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
14:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
14:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:02 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:02 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.046447511935803466
14:02 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:02 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:02 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:02 DEBUG   opendrift.models.oceandrift:609: 3 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [450, 0, 48, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:02 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:02 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:02 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:02 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:02 INFO    opendrift.models.basemodel:2035: 2024-12-02 20:43:52.626553 - step 2 of 96 - 500 active elements (0 deactivated)
14:02 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:02 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:02 DEBUG   opendrift.models.basemodel:2054:               57.54627504382262 <- latitude  -> 57.64946889918748
14:02 DEBUG   opendrift.models.basemodel:2059:               10.508957426920475 <- longitude -> 10.708836110366077
14:02 DEBUG   opendrift.models.basemodel:2064:               -20.137596130371094   <- z ->   0.0
14:02 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 20:00:00 (before)
                2024-12-02 21:00:00 (after)
14:02 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 20:00:00) in space  (linearNDFast)
14:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:02 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 21:00:00) in space  (linearNDFast)
14:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:02 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 20:00:00, weight 0.27) and
                      after (2024-12-02 21:00:00, weight 0.73) in time
14:02 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49105365226418 and -59.29117495612517 degrees.
14:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49105365226418 and -59.29117495612517 degrees.
14:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:02 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:02 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:02 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.110155 (min) 0.129127 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0452307 (min) 0.0995082 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.194019 (min) -0.176846 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.20966 (min) 5.83599 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.54626 (min) 5.52976 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.60376 (min) 23.9855 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.26751 (min) 10.3938 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8057 (min) 32.4846 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.82348e-05 (min) 0.000113759 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:02 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:02 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:02 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:02 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 25
14:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 25.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  2.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
14:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:02 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:02 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.04505049924502073
14:02 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:02 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:02 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:02 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:02 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [425, 0, 47, 28, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:02 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:02 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:02 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:02 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
14:02 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:02 INFO    opendrift.models.basemodel:2035: 2024-12-02 21:13:52.626553 - step 3 of 96 - 500 active elements (0 deactivated)
14:02 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:02 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:02 DEBUG   opendrift.models.basemodel:2054:               57.54650733516721 <- latitude  -> 57.650284813656796
14:02 DEBUG   opendrift.models.basemodel:2059:               10.511185348766467 <- longitude -> 10.709936518970512
14:02 DEBUG   opendrift.models.basemodel:2064:               -20.96622921756921   <- z ->   -0.0865400836612138
14:02 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 21:00:00 (before)
                2024-12-02 22:00:00 (after)
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:04 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:04 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-02 22:00:00)
14:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 21:00:00) in space  (linearNDFast)
14:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 22:00:00) in space  (linearNDFast)
14:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 21:00:00, weight 0.77) and
                      after (2024-12-02 22:00:00, weight 0.23) in time
14:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48882574695483 and -59.290074550155204 degrees.
14:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48882574695483 and -59.290074550155204 degrees.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.100485 (min) 0.123337 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0355581 (min) 0.106863 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.216107 (min) -0.1991 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.34049 (min) 6.33233 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.72795 (min) 4.68049 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.69649 (min) 24.0658 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.26064 (min) 10.415 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.7641 (min) 32.5213 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.41123e-05 (min) 0.000114506 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:04 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
14:04 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:04 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
14:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 46.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  3.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
14:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:04 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:04 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.042777025724839046
14:04 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:04 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:04 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:04 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [404, 0, 46, 50, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:04 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:04 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:04 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:04 INFO    opendrift.models.basemodel:2035: 2024-12-02 21:43:52.626553 - step 4 of 96 - 500 active elements (0 deactivated)
14:04 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:04 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:04 DEBUG   opendrift.models.basemodel:2054:               57.54661027684794 <- latitude  -> 57.65129106772925
14:04 DEBUG   opendrift.models.basemodel:2059:               10.513076396805474 <- longitude -> 10.71237456471626
14:04 DEBUG   opendrift.models.basemodel:2064:               -21.504657745361328   <- z ->   0.0
14:04 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 21:00:00 (before)
                2024-12-02 22:00:00 (after)
14:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 21:00:00) in space  (linearNDFast)
14:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 22:00:00) in space  (linearNDFast)
14:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 21:00:00, weight 0.27) and
                      after (2024-12-02 22:00:00, weight 0.73) in time
14:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48693468820036 and -59.28763648607852 degrees.
14:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48693468820036 and -59.28763648607852 degrees.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0938352 (min) 0.119368 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0434792 (min) 0.111053 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.23299 (min) -0.215732 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.24764 (min) 6.89674 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 2.46102 (min) 3.78269 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.76749 (min) 24.1824 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.26022 (min) 10.4188 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.7728 (min) 32.5235 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.90194e-05 (min) 0.000104844 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:04 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
14:04 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:04 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
14:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 60.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  4.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
14:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:04 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:04 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.041004400581793485
14:04 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:04 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:04 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:04 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:04 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [390, 0, 45, 65, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:04 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:04 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:04 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:04 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:04 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:04 INFO    opendrift.models.basemodel:2035: 2024-12-02 22:13:52.626553 - step 5 of 96 - 500 active elements (0 deactivated)
14:04 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:04 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:04 DEBUG   opendrift.models.basemodel:2054:               57.54645528489286 <- latitude  -> 57.65231255475749
14:04 DEBUG   opendrift.models.basemodel:2059:               10.515559643695244 <- longitude -> 10.714292895428551
14:04 DEBUG   opendrift.models.basemodel:2064:               -22.04105555102452   <- z ->   0.0
14:04 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 22:00:00 (before)
                2024-12-02 23:00:00 (after)
14:06 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:07 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-02 23:00:00)
14:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 22:00:00) in space  (linearNDFast)
14:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 23:00:00) in space  (linearNDFast)
14:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 22:00:00, weight 0.77) and
                      after (2024-12-02 23:00:00, weight 0.23) in time
14:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48445144553987 and -59.28571815818872 degrees.
14:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48445144553987 and -59.28571815818872 degrees.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0872395 (min) 0.117493 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0499393 (min) 0.114199 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.243089 (min) -0.225694 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.59384 (min) 6.9977 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 1.18455 (min) 2.53189 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.2925 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.25622 (min) 10.4263 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.7785 (min) 32.531 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.14929e-05 (min) 9.405e-05 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:07 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
14:07 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:07 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
14:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 75.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  5.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
14:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:07 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:07 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.03775370697035501
14:07 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:07 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:07 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:07 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [375, 0, 44, 81, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:07 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:07 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:07 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:07 INFO    opendrift.models.basemodel:2035: 2024-12-02 22:43:52.626553 - step 6 of 96 - 500 active elements (0 deactivated)
14:07 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:07 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:07 DEBUG   opendrift.models.basemodel:2054:               57.5467227257682 <- latitude  -> 57.653105083187256
14:07 DEBUG   opendrift.models.basemodel:2059:               10.515674673592413 <- longitude -> 10.715978330358952
14:07 DEBUG   opendrift.models.basemodel:2064:               -21.556121709684103   <- z ->   -0.04747178710910127
14:07 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 22:00:00 (before)
                2024-12-02 23:00:00 (after)
14:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 22:00:00) in space  (linearNDFast)
14:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-02 23:00:00) in space  (linearNDFast)
14:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 22:00:00, weight 0.27) and
                      after (2024-12-02 23:00:00, weight 0.73) in time
14:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28403272795596 degrees.
14:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28403272795596 degrees.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.080707 (min) 0.108432 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0583359 (min) 0.120061 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.245302 (min) -0.227866 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.42463 (min) 7.02191 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.913304 (min) 0.803511 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.3998 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.25405 (min) 10.4211 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.785 (min) 32.5208 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -3.03495e-05 (min) 8.36261e-05 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:07 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
14:07 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:07 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
14:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 91.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 1.  0.  0.  6.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
14:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:07 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:07 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.035979987385432226
14:07 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:07 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:07 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:07 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 98 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 98 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 98 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 98 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 99 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 99 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 100 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 100 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 100 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 100 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:07 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [359, 0, 40, 101, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:07 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:07 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:07 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:07 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:07 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:07 INFO    opendrift.models.basemodel:2035: 2024-12-02 23:13:52.626553 - step 7 of 96 - 500 active elements (0 deactivated)
14:07 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:07 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:07 DEBUG   opendrift.models.basemodel:2054:               57.54769454750023 <- latitude  -> 57.653944301383
14:07 DEBUG   opendrift.models.basemodel:2059:               10.515674673592413 <- longitude -> 10.716847292500788
14:07 DEBUG   opendrift.models.basemodel:2064:               -21.877079010009766   <- z ->   -0.09977865473781405
14:07 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 23:00:00 (before)
                2024-12-03 00:00:00 (after)
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:09 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:09 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x36x7) for time after (2024-12-03 00:00:00)
14:09 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 23:00:00) in space  (linearNDFast)
14:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:09 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 00:00:00) in space  (linearNDFast)
14:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:09 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 23:00:00, weight 0.77) and
                      after (2024-12-03 00:00:00, weight 0.23) in time
14:09 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28316377477056 degrees.
14:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28316377477056 degrees.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:09 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:09 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0720394 (min) 0.0858791 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.058446 (min) 0.127762 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.233437 (min) -0.217201 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.52292 (min) 7.12631 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.33788 (min) 0.693126 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.4847 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.24527 (min) 10.4166 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8093 (min) 32.5229 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -3.43069e-05 (min) 7.52269e-05 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:09 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:09 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:09 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
14:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 106.   0.]
 [  0.   0.   0.   0.   0.]
 [  1.   0.   0.  10.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:09 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:09 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.03670190949130966
14:09 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:09 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:09 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:09 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 116 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 116 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 116 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 116 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 118 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 118 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 118 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 118 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [344, 0, 36, 120, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:09 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:09 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:09 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:09 INFO    opendrift.models.basemodel:2035: 2024-12-02 23:43:52.626553 - step 8 of 96 - 500 active elements (0 deactivated)
14:09 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:09 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:09 DEBUG   opendrift.models.basemodel:2054:               57.54769454750023 <- latitude  -> 57.65468697405544
14:09 DEBUG   opendrift.models.basemodel:2059:               10.515674673592418 <- longitude -> 10.716229988149369
14:09 DEBUG   opendrift.models.basemodel:2064:               -21.877079010009766   <- z ->   -0.1920435977330971
14:09 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-02 23:00:00 (before)
                2024-12-03 00:00:00 (after)
14:09 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-02 23:00:00) in space  (linearNDFast)
14:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:09 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 00:00:00) in space  (linearNDFast)
14:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:09 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-02 23:00:00, weight 0.27) and
                      after (2024-12-03 00:00:00, weight 0.73) in time
14:09 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.283781071026254 degrees.
14:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.283781071026254 degrees.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:09 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:09 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:09 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:09 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0608912 (min) 0.0620757 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0479548 (min) 0.130669 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.206721 (min) -0.191678 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.1047 (min) 6.16507 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.395668 (min) 1.60301 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.5133 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.24065 (min) 10.4116 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8197 (min) 32.5138 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -4.41996e-05 (min) 6.55193e-05 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:09 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:09 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:09 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:09 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
14:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0 0 0 0]
14:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3 3 3 3]
14:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 116.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  14.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:09 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:09 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.027673591896545762
14:09 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:09 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:09 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:09 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:09 DEBUG   opendrift.models.oceandrift:627: 132 elements reached seafloor, interacting with bottom
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [335, 0, 33, 132, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:09 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:09 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:09 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:09 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:09 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:09 INFO    opendrift.models.basemodel:2035: 2024-12-03 00:13:52.626553 - step 9 of 96 - 500 active elements (0 deactivated)
14:09 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:09 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:09 DEBUG   opendrift.models.basemodel:2054:               57.54769454750023 <- latitude  -> 57.65537088104398
14:09 DEBUG   opendrift.models.basemodel:2059:               10.515674673592423 <- longitude -> 10.715011765641805
14:09 DEBUG   opendrift.models.basemodel:2064:               -22.092814359323867   <- z ->   -0.09581429031925537
14:09 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 00:00:00 (before)
                2024-12-03 01:00:00 (after)
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:11 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:11 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x36x7) for time after (2024-12-03 01:00:00)
14:11 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 00:00:00) in space  (linearNDFast)
14:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:11 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 01:00:00) in space  (linearNDFast)
14:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:11 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 00:00:00, weight 0.77) and
                      after (2024-12-03 01:00:00, weight 0.23) in time
14:11 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28499931007147 degrees.
14:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28499931007147 degrees.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:11 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:11 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:11 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:11 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:11 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:11 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:11 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:11 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:11 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:11 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0589027 (min) 0.0492153 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0481082 (min) 0.129901 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.168738 (min) -0.155097 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.11708 (min) 4.08776 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.00193 (min) -0.276856 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.5128 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.33447 (min) 10.4063 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8487 (min) 32.5045 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -5.88731e-05 (min) 4.7361e-05 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:11 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 132 elements to seafloor.
14:11 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:11 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
14:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 133.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  16.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:11 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:11 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.012507630132486371
14:11 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:11 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:11 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:11 DEBUG   opendrift.models.oceandrift:609: 3 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 3 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 3 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 2 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 3 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 4 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 4 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 4 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 149 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 149 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 150 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 150 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 5 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 150 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 150 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 150 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 150 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 150 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 150 elements to seafloor.
14:11 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:11 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:11 INFO    opendrift.models.chemicaldrift:1861: partitioning: [318, 0, 32, 150, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:11 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:11 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:11 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 151 elements to seafloor.
14:11 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:11 INFO    opendrift.models.basemodel:2035: 2024-12-03 00:43:52.626553 - step 10 of 96 - 500 active elements (0 deactivated)
14:11 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:11 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:11 DEBUG   opendrift.models.basemodel:2054:               57.547694547500235 <- latitude  -> 57.65618622526053
14:11 DEBUG   opendrift.models.basemodel:2059:               10.515674673592423 <- longitude -> 10.71453814922688
14:11 DEBUG   opendrift.models.basemodel:2064:               -22.58989715576172   <- z ->   -0.0972635270565122
14:11 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:11 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:11 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:11 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 00:00:00 (before)
                2024-12-03 01:00:00 (after)
14:11 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 00:00:00) in space  (linearNDFast)
14:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:11 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 01:00:00) in space  (linearNDFast)
14:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:11 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 00:00:00, weight 0.27) and
                      after (2024-12-03 01:00:00, weight 0.73) in time
14:11 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28547292169808 degrees.
14:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28547292169808 degrees.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:11 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:11 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:11 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:11 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:11 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:11 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:11 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:11 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:11 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:11 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:11 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:11 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:11 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:11 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0728687 (min) 0.0491215 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0428259 (min) 0.121683 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.117742 (min) -0.10542 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.40563 (min) 1.37145 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.05341 (min) -3.92626 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.4157 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.31422 (min) 10.4008 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9766 (min) 32.4949 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -7.57557e-05 (min) 4.69228e-05 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:11 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:11 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 152 elements to seafloor.
14:11 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:11 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
14:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0]
14:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3]
14:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 146.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  17.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:11 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:11 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.027911198758548476
14:11 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:11 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:11 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:11 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:11 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:11 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:11 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:12 DEBUG   opendrift.models.oceandrift:627: 163 elements reached seafloor, interacting with bottom
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [305, 0, 32, 163, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:12 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:12 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:12 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:12 DEBUG   opendrift.models.basemodel:754: Lifting 164 elements to seafloor.
14:12 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:12 INFO    opendrift.models.basemodel:2035: 2024-12-03 01:13:52.626553 - step 11 of 96 - 500 active elements (0 deactivated)
14:12 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:12 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:12 DEBUG   opendrift.models.basemodel:2054:               57.54769454750024 <- latitude  -> 57.65691611911121
14:12 DEBUG   opendrift.models.basemodel:2059:               10.515674673592427 <- longitude -> 10.713751445963355
14:12 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   -0.14102207617629758
14:12 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 01:00:00 (before)
                2024-12-03 02:00:00 (after)
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:13 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:13 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-03 02:00:00)
14:13 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 01:00:00) in space  (linearNDFast)
14:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:13 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 02:00:00) in space  (linearNDFast)
14:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:13 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 01:00:00, weight 0.77) and
                      after (2024-12-03 02:00:00, weight 0.23) in time
14:13 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28625961467025 degrees.
14:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.28625961467025 degrees.
14:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:13 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:13 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:13 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:13 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:13 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0773278 (min) 0.0655197 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0513236 (min) 0.1074 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0638101 (min) -0.0535586 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.56735 (min) -0.856784 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.19797 (min) -6.58435 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.3719 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.25196 (min) 10.3935 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8542 (min) 32.4849 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -9.46618e-05 (min) 5.5242e-05 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:13 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:13 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:13 DEBUG   opendrift.models.basemodel:754: Lifting 163 elements to seafloor.
14:14 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:14 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
14:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 3 0 0 0 0 0 0 0]
14:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 0 3 3 3 3 3 3 3]
14:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 160.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  17.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:14 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:14 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07033560882287186
14:14 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:14 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:14 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:14 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [292, 0, 32, 176, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:14 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:14 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:14 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 177 elements to seafloor.
14:14 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:14 INFO    opendrift.models.basemodel:2035: 2024-12-03 01:43:52.626553 - step 12 of 96 - 500 active elements (0 deactivated)
14:14 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:14 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:14 DEBUG   opendrift.models.basemodel:2054:               57.54769454750024 <- latitude  -> 57.6569161191112
14:14 DEBUG   opendrift.models.basemodel:2059:               10.515674673592427 <- longitude -> 10.711907443735225
14:14 DEBUG   opendrift.models.basemodel:2064:               -22.58989715576172   <- z ->   -0.13029061235707662
14:14 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 01:00:00 (before)
                2024-12-03 02:00:00 (after)
14:14 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 01:00:00) in space  (linearNDFast)
14:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:14 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 02:00:00) in space  (linearNDFast)
14:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:14 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 01:00:00, weight 0.27) and
                      after (2024-12-03 02:00:00, weight 0.73) in time
14:14 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.288103616168115 degrees.
14:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.288103616168115 degrees.
14:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:14 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:14 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:14 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.100441 (min) 0.0786048 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0809493 (min) 0.0927094 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.00591884 (min) 0.00144137 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.04894 (min) -2.51794 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.0934 (min) -8.66409 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.3414 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.31254 (min) 10.384 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8478 (min) 32.4743 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000111556 (min) 3.52949e-05 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:14 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:14 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 178 elements to seafloor.
14:14 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:14 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
14:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 177.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  17.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:14 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:14 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08523252323416207
14:14 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:14 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:14 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:14 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 193 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 193 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:14 DEBUG   opendrift.models.oceandrift:627: 194 elements reached seafloor, interacting with bottom
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 194 elements to seafloor.
14:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [275, 0, 31, 194, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:14 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:14 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:14 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:14 DEBUG   opendrift.models.basemodel:754: Lifting 196 elements to seafloor.
14:14 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:14 INFO    opendrift.models.basemodel:2035: 2024-12-03 02:13:52.626553 - step 13 of 96 - 500 active elements (0 deactivated)
14:14 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:14 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:14 DEBUG   opendrift.models.basemodel:2054:               57.54769454750025 <- latitude  -> 57.656916119111195
14:14 DEBUG   opendrift.models.basemodel:2059:               10.515674673592423 <- longitude -> 10.713171540317926
14:14 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   0.0
14:14 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 02:00:00 (before)
                2024-12-03 03:00:00 (after)
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:16 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:16 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-03 03:00:00)
14:16 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 02:00:00) in space  (linearNDFast)
14:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:16 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 03:00:00) in space  (linearNDFast)
14:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:16 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 02:00:00, weight 0.77) and
                      after (2024-12-03 03:00:00, weight 0.23) in time
14:16 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28683952176756 degrees.
14:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28683952176756 degrees.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:16 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:16 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.114082 (min) 0.0958131 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.112281 (min) 0.0646402 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0482353 (min) 0.0529488 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.82909 (min) -3.85964 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.5225 (min) -9.75034 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.3649 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.26532 (min) 10.3762 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.831 (min) 32.4629 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000141508 (min) 3.64466e-05 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:16 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:16 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:16 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:16 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
14:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 193.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  18.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:16 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:16 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09602368483900105
14:16 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:16 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:16 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:16 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [259, 0, 31, 210, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:16 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:16 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:16 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:16 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:16 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:16 INFO    opendrift.models.basemodel:2035: 2024-12-03 02:43:52.626553 - step 14 of 96 - 500 active elements (0 deactivated)
14:16 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:16 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:16 DEBUG   opendrift.models.basemodel:2054:               57.54769454750024 <- latitude  -> 57.65691611911119
14:16 DEBUG   opendrift.models.basemodel:2059:               10.515674673592423 <- longitude -> 10.714761832835952
14:16 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   -0.05910933943672281
14:16 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 02:00:00 (before)
                2024-12-03 03:00:00 (after)
14:16 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 02:00:00) in space  (linearNDFast)
14:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:16 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 03:00:00) in space  (linearNDFast)
14:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:16 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 02:00:00, weight 0.27) and
                      after (2024-12-03 03:00:00, weight 0.73) in time
14:16 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.285249235308676 degrees.
14:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.285249235308676 degrees.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:16 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:16 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:16 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.12943 (min) 0.123035 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.132164 (min) 0.020797 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0962148 (min) 0.106569 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.84573 (min) -4.83017 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.3521 (min) -9.68169 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.4313 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.23196 (min) 10.3705 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8664 (min) 32.4508 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000189887 (min) 2.82233e-05 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:16 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:16 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:16 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:16 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:16 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
14:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0]
14:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3]
14:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 206.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  18.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:16 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:16 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.10180190017398594
14:16 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:16 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:16 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:16 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:16 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:16 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [246, 0, 31, 223, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:16 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:16 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:16 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:16 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:16 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:16 INFO    opendrift.models.basemodel:2035: 2024-12-03 03:13:52.626553 - step 15 of 96 - 500 active elements (0 deactivated)
14:16 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:16 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:16 DEBUG   opendrift.models.basemodel:2054:               57.54769454750024 <- latitude  -> 57.65691611911119
14:16 DEBUG   opendrift.models.basemodel:2059:               10.515674673592423 <- longitude -> 10.712130573377282
14:16 DEBUG   opendrift.models.basemodel:2064:               -23.657363006613142   <- z ->   -0.009767288544786368
14:16 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:16 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 03:00:00 (before)
                2024-12-03 04:00:00 (after)
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:18 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:18 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-03 04:00:00)
14:18 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 03:00:00) in space  (linearNDFast)
14:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:18 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 04:00:00) in space  (linearNDFast)
14:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:18 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 03:00:00, weight 0.77) and
                      after (2024-12-03 04:00:00, weight 0.23) in time
14:18 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.2878804895914 degrees.
14:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.2878804895914 degrees.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:18 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:18 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:18 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:18 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:18 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:18 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:18 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.136923 (min) 0.148364 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.141727 (min) 0.000546902 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.129985 (min) 0.147908 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.73289 (min) -5.80116 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.0638 (min) -9.54704 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.4058 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.28008 (min) 10.3608 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8511 (min) 32.4374 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000231493 (min) 1.97687e-05 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:18 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:18 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:18 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 24
14:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0]
14:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3 3]
14:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 229.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  18.   0.]
 [  2.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:18 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:18 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.10526152980070157
14:18 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:18 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:18 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
14:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
14:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [224, 0, 45, 231, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:18 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:18 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:18 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
14:18 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:18 INFO    opendrift.models.basemodel:2035: 2024-12-03 03:43:52.626553 - step 16 of 96 - 500 active elements (0 deactivated)
14:18 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:18 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:18 DEBUG   opendrift.models.basemodel:2054:               57.54660588565201 <- latitude  -> 57.656916119111195
14:18 DEBUG   opendrift.models.basemodel:2059:               10.51567467359242 <- longitude -> 10.713426488583057
14:18 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   -0.22956354359457287
14:18 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 03:00:00 (before)
                2024-12-03 04:00:00 (after)
14:18 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 03:00:00) in space  (linearNDFast)
14:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:18 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 04:00:00) in space  (linearNDFast)
14:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:18 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 03:00:00, weight 0.27) and
                      after (2024-12-03 04:00:00, weight 0.73) in time
14:18 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28658457915096 degrees.
14:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.28658457915096 degrees.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:18 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:18 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:18 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:18 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:18 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:18 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:18 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:18 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:18 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:18 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:18 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.145465 (min) 0.176603 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.135718 (min) -0.0114217 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.147034 (min) 0.173276 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.52032 (min) -6.73004 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.72549 (min) -9.36539 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.518 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.30128 (min) 10.3466 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8884 (min) 32.4226 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00026523 (min) 9.07241e-06 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:18 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:18 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:18 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:18 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:18 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
14:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 243.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  18.   0.]
 [  2.   0.  14.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:18 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:18 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.10590486391887907
14:18 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:18 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:18 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:18 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:18 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:18 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:18 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:18 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
14:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 22 elements
14:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [210, 0, 67, 223, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:18 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:18 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:18 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:18 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
14:18 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:18 INFO    opendrift.models.basemodel:2035: 2024-12-03 04:13:52.626553 - step 17 of 96 - 500 active elements (0 deactivated)
14:18 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:18 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:18 DEBUG   opendrift.models.basemodel:2054:               57.545159206270064 <- latitude  -> 57.65691611911119
14:18 DEBUG   opendrift.models.basemodel:2059:               10.515674673592418 <- longitude -> 10.714397392931435
14:18 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   -0.15052407331644974
14:18 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:18 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:18 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:18 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 04:00:00 (before)
                2024-12-03 05:00:00 (after)
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:20 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:20 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x36x7) for time after (2024-12-03 05:00:00)
14:20 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 04:00:00) in space  (linearNDFast)
14:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:20 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 05:00:00) in space  (linearNDFast)
14:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:20 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 04:00:00, weight 0.77) and
                      after (2024-12-03 05:00:00, weight 0.23) in time
14:20 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.285613675469314 degrees.
14:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.285613675469314 degrees.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:20 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:20 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.171346 (min) 0.17489 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.148331 (min) -0.0114024 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.150466 (min) 0.183123 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.98246 (min) -7.37452 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.75897 (min) -9.38753 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.6212 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.30416 (min) 10.3187 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.974 (min) 32.3874 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000286618 (min) 1.6079e-05 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:20 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:20 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:20 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 28
14:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 269.   0.]
 [  0.   0.   0.   0.   0.]
 [  4.   0.   0.  18.   0.]
 [  2.   0.  36.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:20 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:20 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11094012268119784
14:20 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:20 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:20 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:20 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:20 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:20 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
14:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
14:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [186, 0, 67, 247, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:20 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:20 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:20 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:20 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:20 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:20 INFO    opendrift.models.basemodel:2035: 2024-12-03 04:43:52.626553 - step 18 of 96 - 500 active elements (0 deactivated)
14:20 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:20 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:20 DEBUG   opendrift.models.basemodel:2054:               57.543560973804276 <- latitude  -> 57.65691611911119
14:20 DEBUG   opendrift.models.basemodel:2059:               10.515674673592422 <- longitude -> 10.714475821207797
14:20 DEBUG   opendrift.models.basemodel:2064:               -22.589895248413086   <- z ->   -0.2316378053890671
14:20 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 04:00:00 (before)
                2024-12-03 05:00:00 (after)
14:20 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 04:00:00) in space  (linearNDFast)
14:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:20 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 05:00:00) in space  (linearNDFast)
14:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:20 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 04:00:00, weight 0.27) and
                      after (2024-12-03 05:00:00, weight 0.73) in time
14:20 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.285535237893896 degrees.
14:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.285535237893896 degrees.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:20 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:20 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:20 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:20 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.171127 (min) 0.167051 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.125536 (min) -0.000650168 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.138075 (min) 0.174939 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.94643 (min) -7.57075 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.0295 (min) -9.86883 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.6935 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.18516 (min) 10.275 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8145 (min) 32.3285 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000302412 (min) 2.09022e-05 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:20 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:20 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
14:20 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:20 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 22
14:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0]
14:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3]
14:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 290.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  38.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:20 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:20 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11778114699269601
14:20 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:20 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:20 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:20 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:20 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:20 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
14:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
14:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [166, 0, 69, 265, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:20 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:20 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:20 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:20 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
14:20 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:20 INFO    opendrift.models.basemodel:2035: 2024-12-03 05:13:52.626553 - step 19 of 96 - 500 active elements (0 deactivated)
14:20 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:20 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:20 DEBUG   opendrift.models.basemodel:2054:               57.542102958199294 <- latitude  -> 57.65691611911119
14:20 DEBUG   opendrift.models.basemodel:2059:               10.515674673592422 <- longitude -> 10.70998565785506
14:20 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.3884173952456206
14:20 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 05:00:00 (before)
                2024-12-03 06:00:00 (after)
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:22 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:22 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x36x7) for time after (2024-12-03 06:00:00)
14:22 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 05:00:00) in space  (linearNDFast)
14:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:22 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 06:00:00) in space  (linearNDFast)
14:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:22 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 05:00:00, weight 0.77) and
                      after (2024-12-03 06:00:00, weight 0.23) in time
14:22 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.29002540364543 degrees.
14:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.29002540364543 degrees.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:22 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:22 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.177684 (min) 0.136824 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.134119 (min) 0.0197835 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.117308 (min) 0.15763 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.00707 (min) -7.73951 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.3059 (min) -10.0584 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.5899 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.17947 (min) 10.199 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8283 (min) 32.2322 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000317104 (min) 2.27317e-05 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:22 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:22 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
14:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 307.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:22 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:22 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12266246367883923
14:22 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:22 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:22 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [149, 0, 69, 282, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:22 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:22 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:22 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
14:22 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:22 INFO    opendrift.models.basemodel:2035: 2024-12-03 05:43:52.626553 - step 20 of 96 - 500 active elements (0 deactivated)
14:22 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:22 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:22 DEBUG   opendrift.models.basemodel:2054:               57.54102470254332 <- latitude  -> 57.656916119111195
14:22 DEBUG   opendrift.models.basemodel:2059:               10.515674673592422 <- longitude -> 10.704637710744302
14:22 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.24678440464796747
14:22 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 05:00:00 (before)
                2024-12-03 06:00:00 (after)
14:22 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 05:00:00) in space  (linearNDFast)
14:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:22 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 06:00:00) in space  (linearNDFast)
14:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:22 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 05:00:00, weight 0.27) and
                      after (2024-12-03 06:00:00, weight 0.73) in time
14:22 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.295373351726006 degrees.
14:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.295373351726006 degrees.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:22 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:22 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:22 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:22 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.145287 (min) 0.13642 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.100797 (min) 0.0549066 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0868083 (min) 0.128973 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.09348 (min) -7.95858 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.3921 (min) -10.0694 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.4219 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.18822 (min) 10.0853 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9431 (min) 32.0925 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000332897 (min) 2.1083e-05 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:22 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:22 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:22 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:22 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 20
14:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 327.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:22 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:22 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12482958569221622
14:22 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:22 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:22 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:22 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 69, 302, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:22 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:22 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:22 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:22 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:22 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:22 INFO    opendrift.models.basemodel:2035: 2024-12-03 06:13:52.626553 - step 21 of 96 - 500 active elements (0 deactivated)
14:22 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:22 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:22 DEBUG   opendrift.models.basemodel:2054:               57.54033435505538 <- latitude  -> 57.656916119111195
14:22 DEBUG   opendrift.models.basemodel:2059:               10.51567467359242 <- longitude -> 10.70026487038015
14:22 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.18730848238614278
14:22 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 06:00:00 (before)
                2024-12-03 07:00:00 (after)
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:24 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:24 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-03 07:00:00)
14:24 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 06:00:00) in space  (linearNDFast)
14:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:24 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 07:00:00) in space  (linearNDFast)
14:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:24 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 06:00:00, weight 0.77) and
                      after (2024-12-03 07:00:00, weight 0.23) in time
14:24 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.29974618787362 degrees.
14:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.29974618787362 degrees.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:24 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:24 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:24 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:24 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:24 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:24 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:24 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.14981 (min) 0.124546 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.108192 (min) 0.0869417 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0533269 (min) 0.0956536 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.22319 (min) -8.06546 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.4764 (min) -10.1879 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.2303 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.16675 (min) 9.9755 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8471 (min) 32.0808 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000371813 (min) 2.11238e-05 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:24 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
14:24 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:24 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
14:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
14:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
14:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 341.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:24 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:24 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12698046760031828
14:24 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:24 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:24 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:24 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:24 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:24 INFO    opendrift.models.chemicaldrift:1861: partitioning: [115, 0, 69, 316, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:24 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:24 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:24 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:24 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:24 INFO    opendrift.models.basemodel:2035: 2024-12-03 06:43:52.626553 - step 22 of 96 - 500 active elements (0 deactivated)
14:24 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:24 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:24 DEBUG   opendrift.models.basemodel:2054:               57.53997454911742 <- latitude  -> 57.65691611911119
14:24 DEBUG   opendrift.models.basemodel:2059:               10.515674673592418 <- longitude -> 10.698302066113303
14:24 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.3428693805938452
14:24 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 06:00:00 (before)
                2024-12-03 07:00:00 (after)
14:24 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 06:00:00) in space  (linearNDFast)
14:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:24 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 07:00:00) in space  (linearNDFast)
14:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:24 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 06:00:00, weight 0.27) and
                      after (2024-12-03 07:00:00, weight 0.73) in time
14:24 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30170899723399 degrees.
14:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30170899723399 degrees.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:24 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:24 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:24 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:24 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:24 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:24 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:24 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:24 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:24 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:24 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:24 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.155985 (min) 0.101138 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.083754 (min) 0.115389 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0163255 (min) 0.0568512 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.37957 (min) -8.04813 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.6192 (min) -10.4413 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 24.1236 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.17342 (min) 9.87018 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8669 (min) 32.0779 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000329709 (min) 2.31274e-05 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:24 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:24 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:24 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:24 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
14:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0]
14:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3]
14:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 353.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:24 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:24 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13166665589112572
14:24 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:24 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:24 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:24 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:24 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:24 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:24 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:24 INFO    opendrift.models.chemicaldrift:1861: partitioning: [103, 0, 69, 328, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:24 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:24 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:24 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:24 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:24 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:24 INFO    opendrift.models.basemodel:2035: 2024-12-03 07:13:52.626553 - step 23 of 96 - 500 active elements (0 deactivated)
14:24 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:24 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:24 DEBUG   opendrift.models.basemodel:2054:               57.539812926863036 <- latitude  -> 57.65691611911119
14:24 DEBUG   opendrift.models.basemodel:2059:               10.515674673592418 <- longitude -> 10.696178752949063
14:24 DEBUG   opendrift.models.basemodel:2064:               -22.962346069282287   <- z ->   -0.10332107326740797
14:24 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:24 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:24 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:24 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:24 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 07:00:00 (before)
                2024-12-03 08:00:00 (after)
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:26 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:26 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-12-03 08:00:00)
14:26 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 07:00:00) in space  (linearNDFast)
14:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:26 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 08:00:00) in space  (linearNDFast)
14:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:26 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 07:00:00, weight 0.77) and
                      after (2024-12-03 08:00:00, weight 0.23) in time
14:26 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30383232051414 degrees.
14:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30383232051414 degrees.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:26 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:26 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.155251 (min) 0.0908711 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0737201 (min) 0.137614 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0216504 (min) 0.0169275 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.52797 (min) -8.09044 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.6354 (min) -10.4715 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 23.9869 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.19728 (min) 9.78252 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8889 (min) 32.0741 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000345624 (min) 2.51703e-05 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:26 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 233 elements to seafloor.
14:26 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:26 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
14:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0]
14:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3]
14:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 362.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  18.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:26 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:26 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.1339483200730982
14:26 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:26 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:26 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:26 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 238 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 238 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 240 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 240 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 240 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 240 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 239 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 239 elements to seafloor.
14:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [94, 0, 68, 338, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:26 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:26 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:26 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 240 elements to seafloor.
14:26 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:26 INFO    opendrift.models.basemodel:2035: 2024-12-03 07:43:52.626553 - step 24 of 96 - 500 active elements (0 deactivated)
14:26 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:26 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:26 DEBUG   opendrift.models.basemodel:2054:               57.53986296283805 <- latitude  -> 57.65691611911119
14:26 DEBUG   opendrift.models.basemodel:2059:               10.515674673592422 <- longitude -> 10.692379443270724
14:26 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.1203949733467633
14:26 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 07:00:00 (before)
                2024-12-03 08:00:00 (after)
14:26 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 07:00:00) in space  (linearNDFast)
14:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:26 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 08:00:00) in space  (linearNDFast)
14:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:26 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 07:00:00, weight 0.27) and
                      after (2024-12-03 08:00:00, weight 0.73) in time
14:26 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30763162550392 degrees.
14:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.30763162550392 degrees.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:26 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:26 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:26 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:26 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.163669 (min) 0.0745774 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0891838 (min) 0.152608 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.060179 (min) -0.0244499 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.67559 (min) -8.2012 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.4186 (min) -10.2785 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 23.7481 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.14908 (min) 9.71537 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8669 (min) 32.0692 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00034798 (min) 2.72586e-05 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:26 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:26 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 340 elements to seafloor.
14:26 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:26 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0]
14:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3]
14:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 367.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  19.   0.]
 [  2.   0.  41.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:26 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:26 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13198462303057792
14:26 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:26 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:26 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:26 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 343 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 343 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 344 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 344 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 349 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 349 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:26 DEBUG   opendrift.models.oceandrift:627: 350 elements reached seafloor, interacting with bottom
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 350 elements to seafloor.
14:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
14:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
14:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [89, 0, 62, 349, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:26 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:26 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:26 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:26 DEBUG   opendrift.models.basemodel:754: Lifting 351 elements to seafloor.
14:26 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:26 INFO    opendrift.models.basemodel:2035: 2024-12-03 08:13:52.626553 - step 25 of 96 - 500 active elements (0 deactivated)
14:26 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:26 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:26 DEBUG   opendrift.models.basemodel:2054:               57.54033211874548 <- latitude  -> 57.65691611911119
14:26 DEBUG   opendrift.models.basemodel:2059:               10.515674673592422 <- longitude -> 10.690505971058766
14:26 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.2001619580558347
14:26 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:26 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 08:00:00 (before)
                2024-12-03 09:00:00 (after)
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:28 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:28 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 37x34x7) for time after (2024-12-03 09:00:00)
14:28 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 08:00:00) in space  (linearNDFast)
14:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:28 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 09:00:00) in space  (linearNDFast)
14:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:28 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 08:00:00, weight 0.77) and
                      after (2024-12-03 09:00:00, weight 0.23) in time
14:28 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.309505100576835 degrees.
14:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.309505100576835 degrees.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:28 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:28 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.144403 (min) 0.0717482 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0735541 (min) 0.166619 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0966177 (min) -0.0630369 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.71152 (min) -8.30191 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.2993 (min) -10.2059 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 23.5807 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.17834 (min) 9.69481 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9181 (min) 32.0633 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000341428 (min) 3.01058e-05 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:28 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 353 elements to seafloor.
14:28 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:28 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:28 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:28 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:28 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:28 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 0 0]
14:28 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 3 3]
14:28 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 374.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.  26.   0.]
 [  2.   0.  42.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:28 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:28 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:28 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.1308785306430493
14:28 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:28 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:28 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:28 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 7 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 356 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 356 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 357 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 357 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 357 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 357 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 357 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 357 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 357 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 357 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 357 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 357 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 358 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 358 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 359 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 359 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 361 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 361 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 362 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
14:28 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
14:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:28 INFO    opendrift.models.chemicaldrift:1861: partitioning: [83, 0, 56, 361, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:28 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:28 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:28 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 362 elements to seafloor.
14:28 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:28 INFO    opendrift.models.basemodel:2035: 2024-12-03 08:43:52.626553 - step 26 of 96 - 500 active elements (0 deactivated)
14:28 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:28 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:28 DEBUG   opendrift.models.basemodel:2054:               57.54104259917225 <- latitude  -> 57.65691611911118
14:28 DEBUG   opendrift.models.basemodel:2059:               10.515674673592418 <- longitude -> 10.686670145777802
14:28 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.2208173058808951
14:28 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 08:00:00 (before)
                2024-12-03 09:00:00 (after)
14:28 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 08:00:00) in space  (linearNDFast)
14:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:28 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 09:00:00) in space  (linearNDFast)
14:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:28 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 08:00:00, weight 0.27) and
                      after (2024-12-03 09:00:00, weight 0.73) in time
14:28 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.31334091682944 degrees.
14:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433641721716 and -59.31334091682944 degrees.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:28 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:28 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:28 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:28 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.136969 (min) 0.0616269 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0797967 (min) 0.175351 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.130628 (min) -0.0981385 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.61304 (min) -8.25969 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.3601 (min) -10.19 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 23.3137 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.15386 (min) 9.67867 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8977 (min) 32.0564 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000289983 (min) 3.38348e-05 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:28 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:28 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 363 elements to seafloor.
14:28 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:28 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:28 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:28 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:28 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
14:28 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 3 0 0 0]
14:28 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 3]
14:28 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 378.   0.]
 [  0.   0.   0.   0.   0.]
 [  7.   0.   0.  32.   0.]
 [  3.   0.  43.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:28 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:28 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:28 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13071768299167427
14:28 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:28 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:28 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 364 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:28 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:28 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
14:28 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
14:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:28 INFO    opendrift.models.chemicaldrift:1861: partitioning: [81, 0, 59, 360, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:28 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:28 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:28 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:28 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:28 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:28 INFO    opendrift.models.basemodel:2035: 2024-12-03 09:13:52.626553 - step 27 of 96 - 500 active elements (0 deactivated)
14:28 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:28 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:28 DEBUG   opendrift.models.basemodel:2054:               57.5413687000317 <- latitude  -> 57.658278234100685
14:28 DEBUG   opendrift.models.basemodel:2059:               10.515674673592414 <- longitude -> 10.685014134325266
14:28 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.14220912116824147
14:28 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:28 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 09:00:00 (before)
                2024-12-03 10:00:00 (after)
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:30 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:30 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 37x34x7) for time after (2024-12-03 10:00:00)
14:30 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 09:00:00) in space  (linearNDFast)
14:30 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:30 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 10:00:00) in space  (linearNDFast)
14:30 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:30 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 09:00:00, weight 0.77) and
                      after (2024-12-03 10:00:00, weight 0.23) in time
14:30 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.31499693270885 degrees.
14:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.31499693270885 degrees.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:30 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:30 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.126879 (min) 0.0609181 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0851324 (min) 0.184089 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.162085 (min) -0.129767 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.7831 (min) -8.34625 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.3605 (min) -10.1037 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 23.1382 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.17755 (min) 9.66256 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9564 (min) 32.0491 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000289526 (min) 3.79212e-05 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:30 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:30 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:30 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:30 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:30 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:30 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 3]
14:30 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 0]
14:30 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 384.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  33.   0.]
 [  4.   0.  48.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:30 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:30 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:30 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13058184510242257
14:30 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:30 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:30 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:30 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 365 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 365 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 366 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 366 elements to seafloor.
14:30 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
14:30 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
14:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:30 INFO    opendrift.models.chemicaldrift:1861: partitioning: [77, 0, 64, 359, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:30 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:30 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:30 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 363 elements to seafloor.
14:30 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:30 INFO    opendrift.models.basemodel:2035: 2024-12-03 09:43:52.626553 - step 28 of 96 - 500 active elements (0 deactivated)
14:30 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:30 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:30 DEBUG   opendrift.models.basemodel:2054:               57.541150054883616 <- latitude  -> 57.66125349921183
14:30 DEBUG   opendrift.models.basemodel:2059:               10.515674673592414 <- longitude -> 10.6818045218077
14:30 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.27349029661103685
14:30 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 09:00:00 (before)
                2024-12-03 10:00:00 (after)
14:30 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 09:00:00) in space  (linearNDFast)
14:30 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:30 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 10:00:00) in space  (linearNDFast)
14:30 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:30 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 09:00:00, weight 0.27) and
                      after (2024-12-03 10:00:00, weight 0.73) in time
14:30 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.31820653819982 degrees.
14:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.31820653819982 degrees.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:30 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:30 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:30 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:30 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.115743 (min) 0.0553871 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0894145 (min) 0.193555 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.190924 (min) -0.157246 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.13076 (min) -8.53504 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.2732 (min) -9.98103 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.872 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.16464 (min) 9.64646 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9182 (min) 32.0412 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000254197 (min) 4.2423e-05 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:30 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:30 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 364 elements to seafloor.
14:30 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:30 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:30 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:30 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:30 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:30 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 0]
14:30 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
14:30 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 386.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  34.   0.]
 [  5.   0.  55.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:30 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:30 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:30 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13289738755618163
14:30 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:30 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:30 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:30 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 360 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 360 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 361 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 361 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 361 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 361 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 361 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 361 elements to seafloor.
14:30 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:30 DEBUG   opendrift.models.oceandrift:627: 361 elements reached seafloor, interacting with bottom
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 361 elements to seafloor.
14:30 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
14:30 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
14:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:30 INFO    opendrift.models.chemicaldrift:1861: partitioning: [76, 0, 82, 342, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:30 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:30 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:30 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:30 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:30 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:30 INFO    opendrift.models.basemodel:2035: 2024-12-03 10:13:52.626553 - step 29 of 96 - 500 active elements (0 deactivated)
14:30 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:30 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:30 DEBUG   opendrift.models.basemodel:2054:               57.54195081409067 <- latitude  -> 57.6643817516842
14:30 DEBUG   opendrift.models.basemodel:2059:               10.515674673592411 <- longitude -> 10.67934062963512
14:30 DEBUG   opendrift.models.basemodel:2064:               -22.81550407409668   <- z ->   -0.11529472042249989
14:30 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 10:00:00 (before)
                2024-12-03 11:00:00 (after)
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:32 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:32 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 38x34x7) for time after (2024-12-03 11:00:00)
14:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 10:00:00) in space  (linearNDFast)
14:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 11:00:00) in space  (linearNDFast)
14:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 10:00:00, weight 0.77) and
                      after (2024-12-03 11:00:00, weight 0.23) in time
14:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.3206704319627 degrees.
14:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.3206704319627 degrees.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.141612 (min) 0.0563147 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0905694 (min) 0.190807 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.213077 (min) -0.1784 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.51053 (min) -8.73235 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -10.0536 (min) -9.75234 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.8155 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.15381 (min) 9.63128 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9063 (min) 32.0322 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000254953 (min) 4.68103e-05 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:32 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:32 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0]
14:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3]
14:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 390.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  35.   0.]
 [  5.   0.  74.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:32 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:32 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13542892341009707
14:32 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:32 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:32 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 346 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 346 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 6 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 347 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 347 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 348 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 348 elements to seafloor.
14:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
14:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
14:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [73, 0, 97, 330, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:32 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:32 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:32 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 333 elements to seafloor.
14:32 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:32 INFO    opendrift.models.basemodel:2035: 2024-12-03 10:43:52.626553 - step 30 of 96 - 500 active elements (0 deactivated)
14:32 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:32 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:32 DEBUG   opendrift.models.basemodel:2054:               57.54306153821851 <- latitude  -> 57.66713019939957
14:32 DEBUG   opendrift.models.basemodel:2059:               10.515674673592407 <- longitude -> 10.678237787659619
14:32 DEBUG   opendrift.models.basemodel:2064:               -22.58989715576172   <- z ->   -0.7969148479235102
14:32 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 10:00:00 (before)
                2024-12-03 11:00:00 (after)
14:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 10:00:00) in space  (linearNDFast)
14:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 11:00:00) in space  (linearNDFast)
14:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 10:00:00, weight 0.27) and
                      after (2024-12-03 11:00:00, weight 0.73) in time
14:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32177326608222 degrees.
14:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32177326608222 degrees.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.11343 (min) 0.0560696 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0880911 (min) 0.209186 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.226391 (min) -0.191867 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.91341 (min) -8.77234 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.68585 (min) -9.42165 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.6977 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.14254 (min) 9.61037 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9099 (min) 32.0262 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000245765 (min) 5.07187e-05 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:32 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 333 elements to seafloor.
14:32 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:32 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
14:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0]
14:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3]
14:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 396.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  37.   0.]
 [  5.   0.  92.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:32 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:32 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13796125008653026
14:32 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:32 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:32 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 336 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 336 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 337 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 337 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:32 DEBUG   opendrift.models.oceandrift:627: 338 elements reached seafloor, interacting with bottom
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 338 elements to seafloor.
14:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 36
14:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 36 elements
14:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [68, 0, 130, 302, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:32 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:32 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:32 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:32 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:32 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:32 INFO    opendrift.models.basemodel:2035: 2024-12-03 11:13:52.626553 - step 31 of 96 - 500 active elements (0 deactivated)
14:32 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:32 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:32 DEBUG   opendrift.models.basemodel:2054:               57.544397505276976 <- latitude  -> 57.66983021978893
14:32 DEBUG   opendrift.models.basemodel:2059:               10.515674673592407 <- longitude -> 10.676943311578356
14:32 DEBUG   opendrift.models.basemodel:2064:               -22.185567130186413   <- z ->   -0.30675278892455193
14:32 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 11:00:00 (before)
                2024-12-03 12:00:00 (after)
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:34 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:34 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 39x33x7) for time after (2024-12-03 12:00:00)
14:34 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 11:00:00) in space  (linearNDFast)
14:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:34 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 12:00:00) in space  (linearNDFast)
14:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:34 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 11:00:00, weight 0.77) and
                      after (2024-12-03 12:00:00, weight 0.23) in time
14:34 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.323067747848796 degrees.
14:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.323067747848796 degrees.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:34 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:34 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.162186 (min) 0.0542269 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0854973 (min) 0.221209 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.226478 (min) -0.193151 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.1866 (min) -8.7445 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.42433 (min) -9.16325 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.5446 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.06665 (min) 9.59707 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.8753 (min) 32.0236 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000191673 (min) 5.46439e-05 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:34 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:34 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 2 2 0 2 0 2]
14:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3 0 3 0]
14:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 399.   0.]
 [  0.   0.   0.   0.   0.]
 [ 14.   0.   0.  39.   0.]
 [  6.   0. 128.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:34 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:34 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13916921736053997
14:34 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:34 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:34 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:34 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 308 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 308 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 308 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 308 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 308 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 308 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 308 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 308 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 310 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 310 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 310 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 310 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 311 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 311 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 311 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 311 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 311 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 312 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 312 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 312 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 312 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 312 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 312 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 312 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 312 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 313 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 313 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 313 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 313 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 313 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 313 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 313 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 313 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 315 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 315 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 315 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 315 elements to seafloor.
14:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 27
14:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 27 elements
14:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [70, 0, 142, 288, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:34 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:34 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:34 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 290 elements to seafloor.
14:34 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:34 INFO    opendrift.models.basemodel:2035: 2024-12-03 11:43:52.626553 - step 32 of 96 - 500 active elements (0 deactivated)
14:34 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:34 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:34 DEBUG   opendrift.models.basemodel:2054:               57.54522361769275 <- latitude  -> 57.672573418428705
14:34 DEBUG   opendrift.models.basemodel:2059:               10.515674673592411 <- longitude -> 10.675766441330351
14:34 DEBUG   opendrift.models.basemodel:2064:               -20.824609996365073   <- z ->   -0.47494633265863584
14:34 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 11:00:00 (before)
                2024-12-03 12:00:00 (after)
14:34 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 11:00:00) in space  (linearNDFast)
14:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:34 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 12:00:00) in space  (linearNDFast)
14:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:34 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 11:00:00, weight 0.27) and
                      after (2024-12-03 12:00:00, weight 0.73) in time
14:34 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32424461361278 degrees.
14:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32424461361278 degrees.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:34 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:34 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:34 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.129567 (min) 0.0542813 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0827693 (min) 0.235096 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.211171 (min) -0.180404 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2471 (min) -8.65294 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.30339 (min) -9.00814 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.1622 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.11777 (min) 9.57777 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.934 (min) 32.0216 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000190481 (min) 5.85886e-05 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:34 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:34 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 291 elements to seafloor.
14:34 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:34 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
14:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
14:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 400.   0.]
 [  0.   0.   0.   0.   0.]
 [ 16.   0.   0.  50.   0.]
 [  6.   0. 155.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:34 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:34 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13842649379807997
14:34 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:34 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:34 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:34 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 290 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 290 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 291 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 291 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 292 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 292 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 292 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 292 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 292 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 292 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 292 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 292 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 292 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 292 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 293 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 293 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 293 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 293 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 293 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 293 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 295 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 295 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 295 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 295 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 295 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 295 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 295 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 295 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 297 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 297 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 298 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 298 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:34 DEBUG   opendrift.models.oceandrift:627: 299 elements reached seafloor, interacting with bottom
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 299 elements to seafloor.
14:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
14:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
14:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [71, 0, 154, 275, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:34 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:34 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:34 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:34 DEBUG   opendrift.models.basemodel:754: Lifting 276 elements to seafloor.
14:34 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:34 INFO    opendrift.models.basemodel:2035: 2024-12-03 12:13:52.626553 - step 33 of 96 - 500 active elements (0 deactivated)
14:34 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:34 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:34 DEBUG   opendrift.models.basemodel:2054:               57.54655548139723 <- latitude  -> 57.67604047150184
14:34 DEBUG   opendrift.models.basemodel:2059:               10.515674673592411 <- longitude -> 10.672825128058038
14:34 DEBUG   opendrift.models.basemodel:2064:               -20.676402118318723   <- z ->   -0.04226997043966918
14:34 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 12:00:00 (before)
                2024-12-03 13:00:00 (after)
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:36 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:36 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 40x33x7) for time after (2024-12-03 13:00:00)
14:36 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 12:00:00) in space  (linearNDFast)
14:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:36 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 13:00:00) in space  (linearNDFast)
14:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:36 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 12:00:00, weight 0.77) and
                      after (2024-12-03 13:00:00, weight 0.23) in time
14:36 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.327185931092025 degrees.
14:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.327185931092025 degrees.
14:36 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:36 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:36 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:36 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:36 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:36 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:36 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:36 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:36 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:36 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:36 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:36 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:36 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:36 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:36 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:36 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:36 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:36 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.145667 (min) 0.0686299 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0823716 (min) 0.240212 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.183619 (min) -0.157311 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2831 (min) -8.60543 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.18444 (min) -8.89157 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 22.0032 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.12548 (min) 9.56277 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9428 (min) 32.0204 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000153313 (min) 6.24615e-05 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:36 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:36 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 276 elements to seafloor.
14:36 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:36 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
14:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2]
14:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0]
14:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 402.   0.]
 [  0.   0.   0.   0.   0.]
 [ 18.   0.   0.  60.   0.]
 [  6.   0. 179.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:36 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:36 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13737114114816248
14:36 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:36 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:36 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:36 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 277 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 277 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 277 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 277 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 278 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 278 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:36 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:36 DEBUG   opendrift.models.oceandrift:627: 284 elements reached seafloor, interacting with bottom
14:36 DEBUG   opendrift.models.basemodel:754: Lifting 284 elements to seafloor.
14:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
14:37 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
14:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:37 INFO    opendrift.models.chemicaldrift:1861: partitioning: [71, 0, 154, 275, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:37 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:37 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:37 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 275 elements to seafloor.
14:37 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:37 INFO    opendrift.models.basemodel:2035: 2024-12-03 12:43:52.626553 - step 34 of 96 - 500 active elements (0 deactivated)
14:37 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:37 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:37 DEBUG   opendrift.models.basemodel:2054:               57.547483693267395 <- latitude  -> 57.67942783129954
14:37 DEBUG   opendrift.models.basemodel:2059:               10.515674673592411 <- longitude -> 10.67229344096873
14:37 DEBUG   opendrift.models.basemodel:2064:               -20.756618220411113   <- z ->   -0.04716983686021603
14:37 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 12:00:00 (before)
                2024-12-03 13:00:00 (after)
14:37 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 12:00:00) in space  (linearNDFast)
14:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:37 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 13:00:00) in space  (linearNDFast)
14:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:37 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 12:00:00, weight 0.27) and
                      after (2024-12-03 13:00:00, weight 0.73) in time
14:37 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32771761575136 degrees.
14:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32771761575136 degrees.
14:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:37 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:37 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:37 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:37 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.147172 (min) 0.0468823 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0846813 (min) 0.221807 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.141881 (min) -0.122108 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2714 (min) -8.62367 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.10396 (min) -8.82651 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 21.8409 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.12191 (min) 9.54777 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.951 (min) 32.0192 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000170878 (min) 6.69215e-05 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:37 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:37 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 277 elements to seafloor.
14:37 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:37 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
14:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 0]
14:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 3]
14:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 406.   0.]
 [  0.   0.   0.   0.   0.]
 [ 20.   0.   0.  67.   0.]
 [  6.   0. 188.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:37 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:37 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13560602528857774
14:37 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:37 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:37 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:37 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 279 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 279 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 280 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 281 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 282 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 282 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:37 DEBUG   opendrift.models.oceandrift:627: 283 elements reached seafloor, interacting with bottom
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:37 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
14:37 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
14:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:37 INFO    opendrift.models.chemicaldrift:1861: partitioning: [69, 0, 151, 280, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:37 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:37 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:37 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:37 DEBUG   opendrift.models.basemodel:754: Lifting 280 elements to seafloor.
14:37 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:37 INFO    opendrift.models.basemodel:2035: 2024-12-03 13:13:52.626553 - step 35 of 96 - 500 active elements (0 deactivated)
14:37 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:37 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:37 DEBUG   opendrift.models.basemodel:2054:               57.54902601958432 <- latitude  -> 57.682024319138364
14:37 DEBUG   opendrift.models.basemodel:2059:               10.515674673592407 <- longitude -> 10.670645722782462
14:37 DEBUG   opendrift.models.basemodel:2064:               -20.51628803595229   <- z ->   -0.035851763310862886
14:37 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 13:00:00 (before)
                2024-12-03 14:00:00 (after)
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:39 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:39 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 40x34x7) for time after (2024-12-03 14:00:00)
14:39 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 13:00:00) in space  (linearNDFast)
14:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:39 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 14:00:00) in space  (linearNDFast)
14:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:39 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 13:00:00, weight 0.77) and
                      after (2024-12-03 14:00:00, weight 0.23) in time
14:39 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32936533334356 degrees.
14:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32936533334356 degrees.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:39 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:39 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.154336 (min) 0.0552024 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0914881 (min) 0.221877 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0918266 (min) -0.0778689 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.1321 (min) -8.69322 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -9.02908 (min) -8.71471 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 21.6654 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.0749 (min) 9.53211 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9351 (min) 32.0176 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00015599 (min) 7.00603e-05 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:39 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 281 elements to seafloor.
14:39 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:39 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:39 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:39 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:39 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
14:39 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 2 2 2 0]
14:39 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 0 0 0 3]
14:39 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 412.   0.]
 [  0.   0.   0.   0.   0.]
 [ 24.   0.   0.  71.   0.]
 [  6.   0. 191.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:39 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:39 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:39 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.13099913107700392
14:39 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:39 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:39 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 288 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 288 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 288 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 288 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 288 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 288 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
14:39 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
14:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:39 INFO    opendrift.models.chemicaldrift:1861: partitioning: [67, 0, 150, 283, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:39 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:39 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:39 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 283 elements to seafloor.
14:39 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:39 INFO    opendrift.models.basemodel:2035: 2024-12-03 13:43:52.626553 - step 36 of 96 - 500 active elements (0 deactivated)
14:39 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:39 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:39 DEBUG   opendrift.models.basemodel:2054:               57.550241823269694 <- latitude  -> 57.684941630042175
14:39 DEBUG   opendrift.models.basemodel:2059:               10.515674673592411 <- longitude -> 10.670356654686525
14:39 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.06801733496201744
14:39 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 13:00:00 (before)
                2024-12-03 14:00:00 (after)
14:39 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 13:00:00) in space  (linearNDFast)
14:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:39 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 14:00:00) in space  (linearNDFast)
14:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:39 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 13:00:00, weight 0.27) and
                      after (2024-12-03 14:00:00, weight 0.73) in time
14:39 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.329654405342644 degrees.
14:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.329654405342644 degrees.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:39 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:39 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:39 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:39 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.138936 (min) 0.0519635 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.10352 (min) 0.19448 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0320783 (min) -0.0216139 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.83751 (min) -8.82181 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.85862 (min) -8.53154 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 21.2948 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.09376 (min) 9.51805 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9432 (min) 32.0142 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000125579 (min) 7.38929e-05 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:39 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:39 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 285 elements to seafloor.
14:39 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:39 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:39 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:39 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:39 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
14:39 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2 2]
14:39 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0 0]
14:39 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 414.   0.]
 [  0.   0.   0.   0.   0.]
 [ 28.   0.   0.  74.   0.]
 [  6.   0. 197.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:39 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:39 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:39 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12324337930543837
14:39 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:39 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:39 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:39 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 286 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 286 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 287 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 287 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 288 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 288 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 289 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 290 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 290 elements to seafloor.
14:39 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:39 DEBUG   opendrift.models.oceandrift:627: 290 elements reached seafloor, interacting with bottom
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 290 elements to seafloor.
14:39 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
14:39 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
14:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:39 INFO    opendrift.models.chemicaldrift:1861: partitioning: [69, 0, 143, 288, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:39 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:39 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:39 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:39 DEBUG   opendrift.models.basemodel:754: Lifting 289 elements to seafloor.
14:39 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:39 INFO    opendrift.models.basemodel:2035: 2024-12-03 14:13:52.626553 - step 37 of 96 - 500 active elements (0 deactivated)
14:39 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:39 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:39 DEBUG   opendrift.models.basemodel:2054:               57.55107563258772 <- latitude  -> 57.68732016666723
14:39 DEBUG   opendrift.models.basemodel:2059:               10.515674673592407 <- longitude -> 10.669886277014076
14:39 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.08916175371595184
14:39 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 14:00:00 (before)
                2024-12-03 15:00:00 (after)
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:41 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:41 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 41x34x7) for time after (2024-12-03 15:00:00)
14:41 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 14:00:00) in space  (linearNDFast)
14:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:41 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 15:00:00) in space  (linearNDFast)
14:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:41 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 14:00:00, weight 0.77) and
                      after (2024-12-03 15:00:00, weight 0.23) in time
14:41 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.33012476658453 degrees.
14:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.33012476658453 degrees.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:41 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:41 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.125088 (min) 0.0580163 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.117201 (min) 0.176802 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0231824 (min) 0.033722 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.70696 (min) -8.94421 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.73368 (min) -8.37848 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 21.0152 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.0906 (min) 9.49969 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9329 (min) 32.0121 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000122356 (min) 7.62646e-05 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:41 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:41 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:41 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:41 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
14:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0]
14:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3]
14:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 419.   0.]
 [  0.   0.   0.   0.   0.]
 [ 29.   0.   0.  79.   0.]
 [  6.   0. 199.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:41 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:41 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11913230256882311
14:41 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:41 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:41 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:41 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 142, 293, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:41 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:41 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:41 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:41 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:41 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:41 INFO    opendrift.models.basemodel:2035: 2024-12-03 14:43:52.626553 - step 38 of 96 - 500 active elements (0 deactivated)
14:41 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:41 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:41 DEBUG   opendrift.models.basemodel:2054:               57.55138238719331 <- latitude  -> 57.68931072223071
14:41 DEBUG   opendrift.models.basemodel:2059:               10.515674673592404 <- longitude -> 10.670413187248302
14:41 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.07370857140379516
14:41 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 14:00:00 (before)
                2024-12-03 15:00:00 (after)
14:41 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 14:00:00) in space  (linearNDFast)
14:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:41 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 15:00:00) in space  (linearNDFast)
14:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:41 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 14:00:00, weight 0.27) and
                      after (2024-12-03 15:00:00, weight 0.73) in time
14:41 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32959785742596 degrees.
14:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48433640485208 and -59.32959785742596 degrees.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:41 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:41 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:41 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.136523 (min) 0.0666815 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.132797 (min) 0.15167 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0730657 (min) 0.0869915 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.78725 (min) -8.97121 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.66502 (min) -8.2877 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88131 (min) 20.8066 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.10805 (min) 9.47979 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.926 (min) 32.01 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000141139 (min) 7.8306e-05 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:41 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:41 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:41 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
14:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 2 0 2 0 0 0 0 0]
14:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 0 3 3 3 3 3]
14:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 426.   0.]
 [  0.   0.   0.   0.   0.]
 [ 31.   0.   0.  79.   0.]
 [  7.   0. 199.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:41 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:41 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11925736550127065
14:41 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:41 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:41 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:41 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:41 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
14:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
14:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [61, 0, 141, 298, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:41 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:41 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:41 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:41 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:41 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:41 INFO    opendrift.models.basemodel:2035: 2024-12-03 15:13:52.626553 - step 39 of 96 - 500 active elements (0 deactivated)
14:41 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:41 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:41 DEBUG   opendrift.models.basemodel:2054:               57.55139334436421 <- latitude  -> 57.69044565509176
14:41 DEBUG   opendrift.models.basemodel:2059:               10.513569389222274 <- longitude -> 10.67104957085048
14:41 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.06908356299584872
14:41 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 15:00:00 (before)
                2024-12-03 16:00:00 (after)
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:43 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:43 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 42x34x7) for time after (2024-12-03 16:00:00)
14:43 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 15:00:00) in space  (linearNDFast)
14:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:43 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 16:00:00) in space  (linearNDFast)
14:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:43 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 15:00:00, weight 0.77) and
                      after (2024-12-03 16:00:00, weight 0.23) in time
14:43 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48644168944034 and -59.328961484139825 degrees.
14:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48644168944034 and -59.328961484139825 degrees.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:43 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:43 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.117883 (min) 0.0746777 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.149514 (min) 0.130193 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.109392 (min) 0.128668 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.95539 (min) -9.09732 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.48952 (min) -8.18282 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.82572 (min) 20.6868 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.10318 (min) 9.46014 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9214 (min) 32.0031 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000134944 (min) 7.74154e-05 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:43 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:43 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:43 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:43 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:43 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:43 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:43 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 2 2 2]
14:43 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0]
14:43 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 427.   0.]
 [  0.   0.   0.   0.   0.]
 [ 34.   0.   0.  79.   0.]
 [  8.   0. 200.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:43 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:43 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:43 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12110246740979203
14:43 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:43 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:43 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:43 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:43 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:43 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:43 INFO    opendrift.models.chemicaldrift:1861: partitioning: [64, 0, 138, 298, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:43 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:43 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:43 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:43 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:43 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:43 INFO    opendrift.models.basemodel:2035: 2024-12-03 15:43:52.626553 - step 40 of 96 - 500 active elements (0 deactivated)
14:43 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:43 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:43 DEBUG   opendrift.models.basemodel:2054:               57.551522916995026 <- latitude  -> 57.69176784151892
14:43 DEBUG   opendrift.models.basemodel:2059:               10.511579811749092 <- longitude -> 10.670254556560769
14:43 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.13608800864381254
14:43 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 15:00:00 (before)
                2024-12-03 16:00:00 (after)
14:43 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 15:00:00) in space  (linearNDFast)
14:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:43 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 16:00:00) in space  (linearNDFast)
14:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:43 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 15:00:00, weight 0.27) and
                      after (2024-12-03 16:00:00, weight 0.73) in time
14:43 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488431275475186 and -59.32975649798807 degrees.
14:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488431275475186 and -59.32975649798807 degrees.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:43 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:43 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:43 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.128732 (min) 0.0818966 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.1602 (min) 0.121817 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.129969 (min) 0.156876 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2069 (min) -9.33645 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.26986 (min) -7.99117 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.78214 (min) 20.6081 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.0884 (min) 9.4397 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9195 (min) 31.9968 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000138134 (min) 7.25528e-05 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:43 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:43 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:43 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:43 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:43 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:43 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:43 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
14:43 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
14:43 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 428.   0.]
 [  0.   0.   0.   0.   0.]
 [ 36.   0.   0.  79.   0.]
 [  8.   0. 200.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:43 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:43 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:43 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12465318990526927
14:43 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:43 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:43 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:43 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:43 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:43 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:43 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:43 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 136, 299, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:43 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:43 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:43 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:43 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:43 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:43 INFO    opendrift.models.basemodel:2035: 2024-12-03 16:13:52.626553 - step 41 of 96 - 500 active elements (0 deactivated)
14:43 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:43 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:43 DEBUG   opendrift.models.basemodel:2054:               57.551154259897096 <- latitude  -> 57.69306984190438
14:43 DEBUG   opendrift.models.basemodel:2059:               10.509793446465318 <- longitude -> 10.67074219286493
14:43 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.040926733011268146
14:43 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 16:00:00 (before)
                2024-12-03 17:00:00 (after)
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:45 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:45 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 42x34x7) for time after (2024-12-03 17:00:00)
14:45 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 16:00:00) in space  (linearNDFast)
14:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:45 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 17:00:00) in space  (linearNDFast)
14:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:45 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 16:00:00, weight 0.77) and
                      after (2024-12-03 17:00:00, weight 0.23) in time
14:45 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49021764359348 and -59.32926884980218 degrees.
14:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49021764359348 and -59.32926884980218 degrees.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:45 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:45 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.133965 (min) 0.0873795 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.163254 (min) 0.115642 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.135261 (min) 0.170036 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.4475 (min) -9.65513 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -8.12598 (min) -7.74986 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.75021 (min) 20.5292 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.08418 (min) 9.41883 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9191 (min) 31.9907 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000138552 (min) 6.4966e-05 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:45 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:45 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:45 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:45 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:45 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:45 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2]
14:45 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0]
14:45 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 432.   0.]
 [  0.   0.   0.   0.   0.]
 [ 37.   0.   0.  79.   0.]
 [  8.   0. 200.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:45 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:45 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:45 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12648388754650333
14:45 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:45 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:45 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:45 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:45 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:45 INFO    opendrift.models.chemicaldrift:1861: partitioning: [62, 0, 135, 303, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:45 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:45 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:45 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:45 INFO    opendrift.models.basemodel:2035: 2024-12-03 16:43:52.626553 - step 42 of 96 - 500 active elements (0 deactivated)
14:45 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:45 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:45 DEBUG   opendrift.models.basemodel:2054:               57.550695592448555 <- latitude  -> 57.69442545244096
14:45 DEBUG   opendrift.models.basemodel:2059:               10.508300236647985 <- longitude -> 10.669514489924136
14:45 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.276393124433005
14:45 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 16:00:00 (before)
                2024-12-03 17:00:00 (after)
14:45 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 16:00:00) in space  (linearNDFast)
14:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:45 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 17:00:00) in space  (linearNDFast)
14:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:45 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 16:00:00, weight 0.27) and
                      after (2024-12-03 17:00:00, weight 0.73) in time
14:45 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491710848682466 and -59.330496559336495 degrees.
14:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491710848682466 and -59.330496559336495 degrees.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:45 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:45 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:45 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:45 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.126874 (min) 0.0908456 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.15846 (min) 0.137697 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.122766 (min) 0.165841 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.6731 (min) -10.0662 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -7.82062 (min) -7.38454 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.73745 (min) 20.4568 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.08291 (min) 9.39476 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9203 (min) 31.9847 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000135749 (min) 5.61412e-05 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:45 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:45 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:45 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:45 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:45 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:45 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
14:45 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 2 0 0 0 0 0 0 0]
14:45 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 3 3 3 3 3]
14:45 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 440.   0.]
 [  0.   0.   0.   0.   0.]
 [ 38.   0.   0.  79.   0.]
 [  9.   0. 200.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:45 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:45 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:45 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12635464455217635
14:45 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:45 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:45 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:45 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:45 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:45 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
14:45 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:45 INFO    opendrift.models.chemicaldrift:1861: partitioning: [56, 0, 134, 310, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:45 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:45 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:45 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:45 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:45 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:45 INFO    opendrift.models.basemodel:2035: 2024-12-03 17:13:52.626553 - step 43 of 96 - 500 active elements (0 deactivated)
14:45 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:45 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:45 DEBUG   opendrift.models.basemodel:2054:               57.54992281156356 <- latitude  -> 57.6962172966826
14:45 DEBUG   opendrift.models.basemodel:2059:               10.507142225348318 <- longitude -> 10.67012180389742
14:45 DEBUG   opendrift.models.basemodel:2064:               -20.456771850585938   <- z ->   -0.1793162643098859
14:45 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:45 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 17:00:00 (before)
                2024-12-03 18:00:00 (after)
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:47 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:47 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 42x34x7) for time after (2024-12-03 18:00:00)
14:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 17:00:00) in space  (linearNDFast)
14:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 18:00:00) in space  (linearNDFast)
14:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 17:00:00, weight 0.77) and
                      after (2024-12-03 18:00:00, weight 0.23) in time
14:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.492868860561465 and -59.329889245687255 degrees.
14:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.492868860561465 and -59.329889245687255 degrees.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.114196 (min) 0.0926491 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.170402 (min) 0.1621 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.09913 (min) 0.149417 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.8451 (min) -10.3872 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -7.36552 (min) -6.95413 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.72535 (min) 20.4568 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.07205 (min) 9.37387 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9224 (min) 31.9775 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000137522 (min) 4.76622e-05 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:47 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
14:47 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:47 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 2 0 0 3]
14:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 0 3 3 0]
14:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 445.   0.]
 [  0.   0.   0.   0.   0.]
 [ 40.   0.   0.  79.   0.]
 [ 10.   0. 200.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:47 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:47 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.12404866257778348
14:47 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:47 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:47 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:47 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
14:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
14:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [54, 0, 133, 313, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:47 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:47 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:47 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:47 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:47 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:47 INFO    opendrift.models.basemodel:2035: 2024-12-03 17:43:52.626553 - step 44 of 96 - 500 active elements (0 deactivated)
14:47 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:47 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:47 DEBUG   opendrift.models.basemodel:2054:               57.54931222636462 <- latitude  -> 57.69864846604305
14:47 DEBUG   opendrift.models.basemodel:2059:               10.505367615979555 <- longitude -> 10.67094886859582
14:47 DEBUG   opendrift.models.basemodel:2064:               -20.456771850585938   <- z ->   -0.25862312674133925
14:47 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 17:00:00 (before)
                2024-12-03 18:00:00 (after)
14:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 17:00:00) in space  (linearNDFast)
14:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 18:00:00) in space  (linearNDFast)
14:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 17:00:00, weight 0.27) and
                      after (2024-12-03 18:00:00, weight 0.73) in time
14:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4946434797924 and -59.329062169831865 degrees.
14:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4946434797924 and -59.329062169831865 degrees.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.113327 (min) 0.0925209 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.138053 (min) 0.197238 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0623994 (min) 0.118196 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.9649 (min) -10.5541 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.7702 (min) -6.47358 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.66953 (min) 20.4568 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.05943 (min) 9.3535 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9254 (min) 31.9788 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000164321 (min) 3.89589e-05 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:47 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:47 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 3 0]
14:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3]
14:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 447.   0.]
 [  0.   0.   0.   0.   0.]
 [ 42.   0.   0.  79.   0.]
 [ 11.   0. 201.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:47 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:47 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11970258445692483
14:47 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:47 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:47 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:47 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
14:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
14:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [55, 0, 132, 313, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:47 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:47 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:47 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:47 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:47 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:47 INFO    opendrift.models.basemodel:2035: 2024-12-03 18:13:52.626553 - step 45 of 96 - 500 active elements (0 deactivated)
14:47 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:47 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:47 DEBUG   opendrift.models.basemodel:2054:               57.549299260482314 <- latitude  -> 57.70183620631881
14:47 DEBUG   opendrift.models.basemodel:2059:               10.504821036120724 <- longitude -> 10.67187496470226
14:47 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.007746140818210456
14:47 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 18:00:00 (before)
                2024-12-03 19:00:00 (after)
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:49 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:49 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 43x34x7) for time after (2024-12-03 19:00:00)
14:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 18:00:00) in space  (linearNDFast)
14:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 19:00:00) in space  (linearNDFast)
14:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 18:00:00, weight 0.77) and
                      after (2024-12-03 19:00:00, weight 0.23) in time
14:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49519005694468 and -59.32813608251516 degrees.
14:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49519005694468 and -59.32813608251516 degrees.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.117949 (min) 0.0914522 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.122321 (min) 0.25607 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0.0198661 (min) 0.0781757 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.9551 (min) -10.4968 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.30185 (min) -6.0251 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.68163 (min) 20.3711 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.04619 (min) 9.33114 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9289 (min) 31.9796 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000144089 (min) 3.13792e-05 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:49 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:49 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:49 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0]
14:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3]
14:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 451.   0.]
 [  0.   0.   0.   0.   0.]
 [ 43.   0.   0.  79.   0.]
 [ 11.   0. 202.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:49 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:49 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.11454998034262179
14:49 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:49 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:49 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
14:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
14:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [52, 0, 134, 314, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:49 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:49 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:49 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:49 DEBUG   opendrift.models.basemodel:749: No elements hit seafloor.
14:49 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:49 INFO    opendrift.models.basemodel:2035: 2024-12-03 18:43:52.626553 - step 46 of 96 - 500 active elements (0 deactivated)
14:49 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:49 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:49 DEBUG   opendrift.models.basemodel:2054:               57.54883544893208 <- latitude  -> 57.705974785656295
14:49 DEBUG   opendrift.models.basemodel:2059:               10.504553804682468 <- longitude -> 10.673527790645164
14:49 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.07101112014430633
14:49 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 18:00:00 (before)
                2024-12-03 19:00:00 (after)
14:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 18:00:00) in space  (linearNDFast)
14:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 19:00:00) in space  (linearNDFast)
14:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 18:00:00, weight 0.27) and
                      after (2024-12-03 19:00:00, weight 0.73) in time
14:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49545729356633 and -59.326483260278465 degrees.
14:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49545729356633 and -59.326483260278465 degrees.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.112034 (min) 0.119081 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.104026 (min) 0.317747 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0293867 (min) 0.0284639 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.8062 (min) -10.1843 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.88631 (min) -5.61937 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.68693 (min) 20.2903 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.03222 (min) 9.31066 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9331 (min) 31.9797 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000149685 (min) 2.7187e-05 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:49 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:49 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 3 0 0 0 2]
14:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 3 3 0]
14:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 456.   0.]
 [  0.   0.   0.   0.   0.]
 [ 45.   0.   0.  79.   0.]
 [ 12.   0. 205.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:49 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:49 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.10823988743805268
14:49 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:49 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:49 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:49 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
14:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
14:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
14:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [50, 0, 141, 309, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:49 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:49 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:49 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:49 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
14:49 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:49 INFO    opendrift.models.basemodel:2035: 2024-12-03 19:13:52.626553 - step 47 of 96 - 500 active elements (0 deactivated)
14:49 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:49 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:49 DEBUG   opendrift.models.basemodel:2054:               57.54926271092856 <- latitude  -> 57.71111015159365
14:49 DEBUG   opendrift.models.basemodel:2059:               10.50451102364152 <- longitude -> 10.674134755653668
14:49 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.11441872369861886
14:49 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 19:00:00 (before)
                2024-12-03 20:00:00 (after)
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:51 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:51 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 45x34x7) for time after (2024-12-03 20:00:00)
14:51 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 19:00:00) in space  (linearNDFast)
14:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:51 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 20:00:00) in space  (linearNDFast)
14:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:51 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 19:00:00, weight 0.77) and
                      after (2024-12-03 20:00:00, weight 0.23) in time
14:51 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49550005590193 and -59.32587627826041 degrees.
14:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49550005590193 and -59.32587627826041 degrees.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:51 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:51 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:51 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:51 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:51 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:51 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.101218 (min) 0.177967 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0864065 (min) 0.351453 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.0805876 (min) -0.0226314 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.6446 (min) -9.9443 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.54173 (min) -5.28006 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.572 (min) 20.214 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.02008 (min) 9.31007 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9378 (min) 31.98 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000155194 (min) 3.09179e-05 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:51 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 311 elements to seafloor.
14:51 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:51 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
14:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 2]
14:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 0]
14:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 462.   0.]
 [  0.   0.   0.   0.   0.]
 [ 47.   0.   0.  80.   0.]
 [ 12.   0. 215.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:51 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:51 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.10284543285162943
14:51 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:51 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:51 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 315 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 315 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 316 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 316 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 316 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 316 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 316 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 316 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 316 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 316 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 317 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 317 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 8 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 318 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 318 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 319 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 319 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 319 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 319 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 319 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 319 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 319 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 319 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 319 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 319 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 320 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 320 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 320 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 320 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 321 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 321 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 322 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 322 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 323 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 323 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 324 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 324 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 325 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 325 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 325 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 325 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 325 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 325 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 325 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 325 elements to seafloor.
14:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
14:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
14:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [46, 0, 153, 301, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:51 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:51 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:51 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 301 elements to seafloor.
14:51 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:51 INFO    opendrift.models.basemodel:2035: 2024-12-03 19:43:52.626553 - step 48 of 96 - 500 active elements (0 deactivated)
14:51 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:51 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:51 DEBUG   opendrift.models.basemodel:2054:               57.54956304219801 <- latitude  -> 57.71679020209704
14:51 DEBUG   opendrift.models.basemodel:2059:               10.504667279963869 <- longitude -> 10.677430718971644
14:51 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.10935891366643431
14:51 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 19:00:00 (before)
                2024-12-03 20:00:00 (after)
14:51 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 19:00:00) in space  (linearNDFast)
14:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:51 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 20:00:00) in space  (linearNDFast)
14:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:51 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 19:00:00, weight 0.27) and
                      after (2024-12-03 20:00:00, weight 0.73) in time
14:51 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49534381752398 and -59.322580315132946 degrees.
14:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49534381752398 and -59.322580315132946 degrees.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:51 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:51 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:51 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:51 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:51 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:51 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:51 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:51 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:51 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.103729 (min) 0.207468 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0700923 (min) 0.46001 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.13442 (min) -0.0752315 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.4653 (min) -9.8102 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.2327 (min) -5.03117 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.44601 (min) 20.1132 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.01008 (min) 9.28783 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9431 (min) 31.9807 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000174348 (min) 3.34003e-05 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:51 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:51 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 302 elements to seafloor.
14:51 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:51 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
14:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
14:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 464.   0.]
 [  0.   0.   0.   0.   0.]
 [ 48.   0.   0.  90.   0.]
 [ 12.   0. 239.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:51 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:51 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0981386478707842
14:51 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:51 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:51 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:51 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 303 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 303 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 304 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 304 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 305 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 305 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 306 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 306 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:51 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:51 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:51 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
14:52 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:52 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:52 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:52 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:52 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:52 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
14:52 DEBUG   opendrift.models.oceandrift:627: 307 elements reached seafloor, interacting with bottom
14:52 DEBUG   opendrift.models.basemodel:754: Lifting 307 elements to seafloor.
14:52 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 57
14:52 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:52 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 57 elements
14:52 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:52 INFO    opendrift.models.chemicaldrift:1861: partitioning: [45, 0, 205, 250, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:52 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:52 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:52 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:52 DEBUG   opendrift.models.basemodel:754: Lifting 253 elements to seafloor.
14:52 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:52 INFO    opendrift.models.basemodel:2035: 2024-12-03 20:13:52.626553 - step 49 of 96 - 500 active elements (0 deactivated)
14:52 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:52 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:52 DEBUG   opendrift.models.basemodel:2054:               57.55061147318473 <- latitude  -> 57.72422470002703
14:52 DEBUG   opendrift.models.basemodel:2059:               10.504983062918273 <- longitude -> 10.683697909469211
14:52 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.09007585597320991
14:52 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:52 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 20:00:00 (before)
                2024-12-03 21:00:00 (after)
14:53 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:53 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:53 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 47x34x7) for time after (2024-12-03 21:00:00)
14:53 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 20:00:00) in space  (linearNDFast)
14:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:54 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 21:00:00) in space  (linearNDFast)
14:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:54 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 20:00:00, weight 0.77) and
                      after (2024-12-03 21:00:00, weight 0.23) in time
14:54 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49502803819579 and -59.31631311633638 degrees.
14:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49502803819579 and -59.31631311633638 degrees.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:54 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:54 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:54 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0978514 (min) 0.200719 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0550785 (min) 0.559677 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.189513 (min) -0.127811 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.3377 (min) -9.67155 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.9066 (min) -4.7059 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.29504 (min) 20.068 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 9.00008 (min) 9.25753 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9489 (min) 31.9812 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000165463 (min) 3.85102e-05 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:54 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 257 elements to seafloor.
14:54 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:54 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2]
14:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0]
14:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 468.   0.]
 [  0.   0.   0.   0.   0.]
 [ 49.   0.   0.  94.   0.]
 [ 12.   0. 296.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:54 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:54 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09400724275891395
14:54 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:54 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:54 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:54 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 254 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 254 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 256 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 256 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 256 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 256 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 258 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 258 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 259 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 259 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 260 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 260 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 260 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 260 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 260 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 260 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 260 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 260 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 262 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 262 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 262 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 262 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 263 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 263 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 264 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 264 elements to seafloor.
14:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 69
14:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 69 elements
14:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [42, 0, 263, 195, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:54 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:54 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:54 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 199 elements to seafloor.
14:54 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:54 INFO    opendrift.models.basemodel:2035: 2024-12-03 20:43:52.626553 - step 50 of 96 - 500 active elements (0 deactivated)
14:54 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:54 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:54 DEBUG   opendrift.models.basemodel:2054:               57.55179285998899 <- latitude  -> 57.73327008459768
14:54 DEBUG   opendrift.models.basemodel:2059:               10.50543278746703 <- longitude -> 10.688070310672845
14:54 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.055850414301413714
14:54 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 20:00:00 (before)
                2024-12-03 21:00:00 (after)
14:54 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 20:00:00) in space  (linearNDFast)
14:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:54 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 21:00:00) in space  (linearNDFast)
14:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:54 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 20:00:00, weight 0.27) and
                      after (2024-12-03 21:00:00, weight 0.73) in time
14:54 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49457830734922 and -59.3119407163629 degrees.
14:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49457830734922 and -59.3119407163629 degrees.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:54 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:54 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:54 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:54 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.108202 (min) 0.219019 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0409323 (min) 0.611515 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.24325 (min) -0.180464 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2689 (min) -9.52846 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.55946 (min) -4.28872 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.14059 (min) 20.068 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.99008 (min) 9.25109 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9551 (min) 31.9815 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000170433 (min) 7.50925e-05 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:54 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:54 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:54 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
14:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
14:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 468.   0.]
 [  0.   0.   0.   0.   0.]
 [ 52.   0.   0. 104.   0.]
 [ 12.   0. 365.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:54 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:54 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09053276402724479
14:54 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:54 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:54 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:54 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 196 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 196 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 196 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 196 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 198 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 198 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 198 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 198 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 200 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 200 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 200 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 200 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 200 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 200 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 201 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 201 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 201 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 201 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 202 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 202 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 203 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 203 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 204 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 204 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 204 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 204 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 204 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 204 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 205 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 205 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 205 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 205 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 206 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 206 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 206 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 206 elements to seafloor.
14:54 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:54 DEBUG   opendrift.models.oceandrift:627: 206 elements reached seafloor, interacting with bottom
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 206 elements to seafloor.
14:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 44
14:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 44 elements
14:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [45, 0, 293, 162, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:54 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:54 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:54 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:54 DEBUG   opendrift.models.basemodel:754: Lifting 166 elements to seafloor.
14:54 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:54 INFO    opendrift.models.basemodel:2035: 2024-12-03 21:13:52.626553 - step 51 of 96 - 500 active elements (0 deactivated)
14:54 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:54 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:54 DEBUG   opendrift.models.basemodel:2054:               57.55335179786197 <- latitude  -> 57.74315332224959
14:54 DEBUG   opendrift.models.basemodel:2059:               10.506021165990575 <- longitude -> 10.687712518623542
14:54 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.11032858244832919
14:54 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 21:00:00 (before)
                2024-12-03 22:00:00 (after)
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:55 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:55 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 49x35x7) for time after (2024-12-03 22:00:00)
14:55 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 21:00:00) in space  (linearNDFast)
14:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:55 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 22:00:00) in space  (linearNDFast)
14:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:55 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 21:00:00, weight 0.77) and
                      after (2024-12-03 22:00:00, weight 0.23) in time
14:55 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.493989925584174 and -59.31229850743273 degrees.
14:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.493989925584174 and -59.31229850743273 degrees.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:55 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:55 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0902509 (min) 0.193254 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0268219 (min) 0.549476 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.291691 (min) -0.228814 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.267 (min) -9.4019 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.26666 (min) -3.95062 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.03186 (min) 21.9296 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.98008 (min) 9.25 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9623 (min) 31.9817 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000633817 (min) 0.000112579 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:55 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 168 elements to seafloor.
14:55 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:55 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2]
14:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0]
14:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 470.   0.]
 [  0.   0.   0.   0.   0.]
 [ 53.   0.   0. 115.   0.]
 [ 12.   0. 409.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:55 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:55 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08843160508494533
14:55 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:55 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:55 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:55 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 165 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 165 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 167 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 167 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 169 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 169 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 170 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 170 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 170 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 170 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 172 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 172 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 172 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 172 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 174 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 174 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 176 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 176 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 177 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 177 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 178 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 178 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 179 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 179 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 180 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 180 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 182 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 182 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 182 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 182 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 182 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 182 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 182 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 182 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 183 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 183 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 185 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 185 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 186 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 186 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 187 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 187 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 187 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 187 elements to seafloor.
14:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 61
14:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 61 elements
14:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [44, 0, 330, 126, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:55 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:55 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:55 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 128 elements to seafloor.
14:55 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:55 INFO    opendrift.models.basemodel:2035: 2024-12-03 21:43:52.626553 - step 52 of 96 - 500 active elements (0 deactivated)
14:55 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:55 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:55 DEBUG   opendrift.models.basemodel:2054:               57.55335179786198 <- latitude  -> 57.751460724391755
14:55 DEBUG   opendrift.models.basemodel:2059:               10.506766178568144 <- longitude -> 10.691616564323065
14:55 DEBUG   opendrift.models.basemodel:2064:               -20.0679874420166   <- z ->   -0.13630049234478614
14:55 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 21:00:00 (before)
                2024-12-03 22:00:00 (after)
14:55 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 21:00:00) in space  (linearNDFast)
14:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:55 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 22:00:00) in space  (linearNDFast)
14:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:55 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 21:00:00, weight 0.27) and
                      after (2024-12-03 22:00:00, weight 0.73) in time
14:55 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49324491910363 and -59.308394459115384 degrees.
14:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49324491910363 and -59.308394459115384 degrees.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:55 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:55 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:55 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.181115 (min) 0.239446 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0142363 (min) 0.529518 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.33571 (min) -0.272381 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.3434 (min) -9.32927 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.03685 (min) -3.69591 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.96511 (min) 25.7817 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.96624 (min) 9.24195 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9706 (min) 31.9818 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000414186 (min) 0.000143369 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:55 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:55 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:55 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
14:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 0]
14:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 3]
14:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 473.   0.]
 [  0.   0.   0.   0.   0.]
 [ 55.   0.   0. 138.   0.]
 [ 12.   0. 470.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:55 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:55 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08786609637561135
14:55 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:55 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:55 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:55 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 129 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 129 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 130 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 130 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 131 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 131 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 134 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 134 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 135 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 135 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 135 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 135 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 137 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 137 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 137 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 137 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 138 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 138 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 138 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 138 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 138 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 138 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 139 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 139 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 139 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 139 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 139 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 139 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 139 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 139 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 140 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 140 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 141 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 141 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 142 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 142 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 143 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 143 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 144 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 144 elements to seafloor.
14:55 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:55 DEBUG   opendrift.models.oceandrift:627: 145 elements reached seafloor, interacting with bottom
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 145 elements to seafloor.
14:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 38
14:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 38 elements
14:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [43, 0, 350, 107, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:55 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:55 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:55 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:55 DEBUG   opendrift.models.basemodel:754: Lifting 112 elements to seafloor.
14:55 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:55 INFO    opendrift.models.basemodel:2035: 2024-12-03 22:13:52.626553 - step 53 of 96 - 500 active elements (0 deactivated)
14:55 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:55 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:55 DEBUG   opendrift.models.basemodel:2054:               57.55335179786198 <- latitude  -> 57.759993856072064
14:55 DEBUG   opendrift.models.basemodel:2059:               10.507603316407085 <- longitude -> 10.696902899152363
14:55 DEBUG   opendrift.models.basemodel:2064:               -19.37276879075509   <- z ->   -0.19461815814406064
14:55 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 22:00:00 (before)
                2024-12-03 23:00:00 (after)
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
14:58 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
14:58 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x35x7) for time after (2024-12-03 23:00:00)
14:58 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 22:00:00) in space  (linearNDFast)
14:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:58 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 23:00:00) in space  (linearNDFast)
14:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:58 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 22:00:00, weight 0.77) and
                      after (2024-12-03 23:00:00, weight 0.23) in time
14:58 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49240777753462 and -59.3031081254753 degrees.
14:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49240777753462 and -59.3031081254753 degrees.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:58 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:58 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.276423 (min) 0.304779 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.00111474 (min) 0.588834 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.371707 (min) -0.309803 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.4105 (min) -9.38016 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.87877 (min) -3.47723 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.8392 (min) 31.9301 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.92457 (min) 9.22886 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9723 (min) 31.9816 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000419105 (min) 7.40566e-05 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:58 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 113 elements to seafloor.
14:58 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:58 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
14:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2]
14:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0]
14:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 473.   0.]
 [  0.   0.   0.   0.   0.]
 [ 61.   0.   0. 154.   0.]
 [ 12.   0. 508.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:58 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:58 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08790171163257078
14:58 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:58 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:58 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:58 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 108 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 108 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 108 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 108 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 109 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 109 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 109 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 109 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 110 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 110 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 113 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 113 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 113 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 113 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 115 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 115 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 115 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 115 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 115 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 115 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 116 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 116 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 119 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 119 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 120 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 120 elements to seafloor.
14:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 30
14:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 30 elements
14:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [49, 0, 361, 90, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:58 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:58 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:58 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 93 elements to seafloor.
14:58 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:58 INFO    opendrift.models.basemodel:2035: 2024-12-03 22:43:52.626553 - step 54 of 96 - 500 active elements (0 deactivated)
14:58 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:58 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:58 DEBUG   opendrift.models.basemodel:2054:               57.55335179786198 <- latitude  -> 57.76666013009971
14:58 DEBUG   opendrift.models.basemodel:2059:               10.508525175245257 <- longitude -> 10.701503039291032
14:58 DEBUG   opendrift.models.basemodel:2064:               -19.43729436468278   <- z ->   -0.07617700045525011
14:58 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 22:00:00 (before)
                2024-12-03 23:00:00 (after)
14:58 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 22:00:00) in space  (linearNDFast)
14:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:58 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-03 23:00:00) in space  (linearNDFast)
14:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
14:58 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 22:00:00, weight 0.27) and
                      after (2024-12-03 23:00:00, weight 0.73) in time
14:58 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
14:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491485918215346 and -59.29850798409465 degrees.
14:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491485918215346 and -59.29850798409465 degrees.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
14:58 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
14:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
14:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
14:58 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
14:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
14:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
14:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
14:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
14:58 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
14:58 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.380153 (min) 0.275492 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0101491 (min) 0.53873 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.399887 (min) -0.340092 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.4669 (min) -9.56632 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.80481 (min) -3.28389 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.78416 (min) 38.379 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.91364 (min) 9.23204 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9579 (min) 31.9811 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000343065 (min) 0.000410298 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
14:58 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
14:58 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 99 elements to seafloor.
14:58 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
14:58 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
14:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
14:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
14:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
14:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2]
14:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0]
14:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 475.   0.]
 [  0.   0.   0.   0.   0.]
 [ 62.   0.   0. 167.   0.]
 [ 12.   0. 538.   0.   0.]
 [  0.   0.   0.   0.   0.]]
14:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
14:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
14:58 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
14:58 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08851987358757216
14:58 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
14:58 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
14:58 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
14:58 DEBUG   opendrift.models.oceandrift:609: 58 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 94 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 94 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 94 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 94 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 95 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 95 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 95 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 95 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 95 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 95 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 96 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 96 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 98 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 98 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 101 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 101 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 102 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 102 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 103 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 103 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 103 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 103 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 103 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 103 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 103 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 103 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 104 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 104 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 104 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 104 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 104 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 104 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 104 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 104 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 105 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 105 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 107 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 107 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 107 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 107 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 108 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 108 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 110 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 110 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 110 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 110 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 113 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 113 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 114 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 114 elements to seafloor.
14:58 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
14:58 DEBUG   opendrift.models.oceandrift:627: 117 elements reached seafloor, interacting with bottom
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 117 elements to seafloor.
14:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 44
14:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
14:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 44 elements
14:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
14:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [48, 0, 379, 73, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
14:58 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
14:58 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
14:58 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
14:58 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
14:58 DEBUG   opendrift.models.basemodel:2034: ======================================================================
14:58 INFO    opendrift.models.basemodel:2035: 2024-12-03 23:13:52.626553 - step 55 of 96 - 500 active elements (0 deactivated)
14:58 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
14:58 DEBUG   opendrift.models.basemodel:2043: ======================================================================
14:58 DEBUG   opendrift.models.basemodel:2054:               57.55335179786198 <- latitude  -> 57.77095221895275
14:58 DEBUG   opendrift.models.basemodel:2059:               10.509266041038392 <- longitude -> 10.705455278857835
14:58 DEBUG   opendrift.models.basemodel:2064:               -19.944625854492188   <- z ->   -0.0711814918963769
14:58 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
14:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
14:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
14:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
14:58 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 23:00:00 (before)
                2024-12-04 00:00:00 (after)
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:00 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:00 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x34x7) for time after (2024-12-04 00:00:00)
15:00 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 23:00:00) in space  (linearNDFast)
15:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:00 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 00:00:00) in space  (linearNDFast)
15:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:00 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 23:00:00, weight 0.77) and
                      after (2024-12-04 00:00:00, weight 0.23) in time
15:00 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49074504774617 and -59.29455574910016 degrees.
15:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49074504774617 and -59.29455574910016 degrees.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:00 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:00 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:00 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:00 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:00 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:00 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.383963 (min) 0.264799 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0223722 (min) 0.617862 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.420751 (min) -0.359149 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.3989 (min) -9.61922 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.80165 (min) -3.2851 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.73164 (min) 43.5437 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.88878 (min) 9.25613 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9937 (min) 31.9807 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000431395 (min) 0.000686533 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:00 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:00 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 0 2]
15:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 3 0]
15:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 476.   0.]
 [  0.   0.   0.   0.   0.]
 [ 68.   0.   0. 192.   0.]
 [ 12.   0. 582.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:00 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:00 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0866572182435232
15:00 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:00 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:00 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:00 DEBUG   opendrift.models.oceandrift:609: 61 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 58 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 76 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 76 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 91 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 91 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 91 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 91 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 93 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 93 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 95 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 95 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 95 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 95 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 97 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 97 elements to seafloor.
15:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 37
15:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 37 elements
15:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [53, 0, 387, 60, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:00 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:00 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:00 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:00 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:00 INFO    opendrift.models.basemodel:2035: 2024-12-03 23:43:52.626553 - step 56 of 96 - 500 active elements (0 deactivated)
15:00 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:00 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:00 DEBUG   opendrift.models.basemodel:2054:               57.554450406114576 <- latitude  -> 57.77474622328332
15:00 DEBUG   opendrift.models.basemodel:2059:               10.509971435634398 <- longitude -> 10.707560976585484
15:00 DEBUG   opendrift.models.basemodel:2064:               -35.04311099451567   <- z ->   -0.06481677954475851
15:00 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-03 23:00:00 (before)
                2024-12-04 00:00:00 (after)
15:00 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-03 23:00:00) in space  (linearNDFast)
15:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:00 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 00:00:00) in space  (linearNDFast)
15:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:00 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-03 23:00:00, weight 0.27) and
                      after (2024-12-04 00:00:00, weight 0.73) in time
15:00 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49003965912082 and -59.29245004018367 degrees.
15:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49003965912082 and -59.29245004018367 degrees.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:00 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:00 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:00 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:00 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:00 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:00 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:00 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:00 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:00 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.585057 (min) 0.348649 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0450215 (min) 0.602945 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.421912 (min) -0.365015 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.1986 (min) -9.50333 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.88769 (min) -3.11909 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.66947 (min) 48.9462 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.8661 (min) 9.33685 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9724 (min) 32.8377 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000518388 (min) 0.00148443 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:00 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:00 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:00 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:00 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
15:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 2 2 0 2 2 0 0]
15:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 0 0 3 0 0 3 3]
15:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 480.   0.]
 [  0.   0.   0.   0.   0.]
 [ 76.   0.   0. 215.   0.]
 [ 12.   0. 619.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:00 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:00 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08402888430125391
15:00 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:00 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:00 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:00 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 56 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 67 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 67 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:00 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:00 DEBUG   opendrift.models.oceandrift:627: 84 elements reached seafloor, interacting with bottom
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 84 elements to seafloor.
15:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 35
15:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 35 elements
15:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [57, 0, 394, 49, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:00 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:00 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:00 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:00 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:00 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:00 INFO    opendrift.models.basemodel:2035: 2024-12-04 00:13:52.626553 - step 57 of 96 - 500 active elements (0 deactivated)
15:00 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:00 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:00 DEBUG   opendrift.models.basemodel:2054:               57.554450406114576 <- latitude  -> 57.77401735908235
15:00 DEBUG   opendrift.models.basemodel:2059:               10.510932169549232 <- longitude -> 10.708377282586246
15:00 DEBUG   opendrift.models.basemodel:2064:               -30.90117910822351   <- z ->   -0.04998741720452621
15:00 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:00 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:00 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:00 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 00:00:00 (before)
                2024-12-04 01:00:00 (after)
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:03 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:03 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x37x7) for time after (2024-12-04 01:00:00)
15:03 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 00:00:00) in space  (linearNDFast)
15:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:03 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 01:00:00) in space  (linearNDFast)
15:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:03 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 00:00:00, weight 0.77) and
                      after (2024-12-04 01:00:00, weight 0.23) in time
15:03 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48907891677085 and -59.291633731864394 degrees.
15:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48907891677085 and -59.291633731864394 degrees.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:03 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:03 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:03 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:03 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:03 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:03 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:03 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.597415 (min) 0.296177 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.101065 (min) 0.57274 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.406526 (min) -0.361577 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.1745 (min) -9.64015 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.72078 (min) -2.54511 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.56529 (min) 49.6265 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.84576 (min) 9.34014 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 30.9936 (min) 33.0734 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000905183 (min) 0.00176058 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:03 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:03 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:03 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0]
15:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3]
15:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 481.   0.]
 [  0.   0.   0.   0.   0.]
 [ 80.   0.   0. 235.   0.]
 [ 12.   0. 654.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:03 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:03 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08408302740005741
15:03 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:03 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:03 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:03 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 51 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 67 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 33
15:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 33 elements
15:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [60, 0, 398, 42, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:03 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:03 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:03 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:03 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:03 INFO    opendrift.models.basemodel:2035: 2024-12-04 00:43:52.626553 - step 58 of 96 - 500 active elements (0 deactivated)
15:03 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:03 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:03 DEBUG   opendrift.models.basemodel:2054:               57.554450406114576 <- latitude  -> 57.772382677113136
15:03 DEBUG   opendrift.models.basemodel:2059:               10.511655048774703 <- longitude -> 10.708178685299394
15:03 DEBUG   opendrift.models.basemodel:2064:               -34.817618501725015   <- z ->   -0.0390734597254469
15:03 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 00:00:00 (before)
                2024-12-04 01:00:00 (after)
15:03 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 00:00:00) in space  (linearNDFast)
15:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:03 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 01:00:00) in space  (linearNDFast)
15:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:03 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 00:00:00, weight 0.27) and
                      after (2024-12-04 01:00:00, weight 0.73) in time
15:03 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488356039958354 and -59.29183233396088 degrees.
15:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488356039958354 and -59.29183233396088 degrees.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:03 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:03 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:03 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:03 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:03 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:03 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:03 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:03 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:03 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:03 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:03 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.629912 (min) 0.300582 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.143661 (min) 0.546103 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.374227 (min) -0.345736 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.4076 (min) -10.0399 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.277 (min) -1.65716 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.51482 (min) 49.4748 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.80826 (min) 9.31804 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0151 (min) 33.4648 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00129518 (min) 0.00166101 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:03 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:03 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:03 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:03 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 2 2]
15:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 0 0]
15:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 482.   0.]
 [  0.   0.   0.   0.   0.]
 [ 86.   0.   0. 260.   0.]
 [ 12.   0. 687.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:03 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:03 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08550253969756125
15:03 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:03 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:03 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:03 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 45 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 47 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 48 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 48 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 51 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 50 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:03 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:03 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
15:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
15:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 394, 41, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:03 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:03 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:03 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:03 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:03 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:03 INFO    opendrift.models.basemodel:2035: 2024-12-04 01:13:52.626553 - step 59 of 96 - 500 active elements (0 deactivated)
15:03 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:03 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:03 DEBUG   opendrift.models.basemodel:2054:               57.556773968416756 <- latitude  -> 57.77009301881397
15:03 DEBUG   opendrift.models.basemodel:2059:               10.511655048774706 <- longitude -> 10.708987302311249
15:03 DEBUG   opendrift.models.basemodel:2064:               -35.631614685058594   <- z ->   0.0
15:03 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:03 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:03 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:03 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:03 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 01:00:00 (before)
                2024-12-04 02:00:00 (after)
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:05 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x38x7) for time after (2024-12-04 02:00:00)
15:05 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 01:00:00) in space  (linearNDFast)
15:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:05 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 02:00:00) in space  (linearNDFast)
15:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:05 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 01:00:00, weight 0.77) and
                      after (2024-12-04 02:00:00, weight 0.23) in time
15:05 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835604525852 and -59.29102372066541 degrees.
15:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835604525852 and -59.29102372066541 degrees.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:05 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:05 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.648767 (min) 0.260886 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.151933 (min) 0.479969 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.330818 (min) -0.313848 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.7411 (min) -10.0554 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.9049 (min) -0.92962 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.39384 (min) 48.9631 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.78938 (min) 9.36806 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0205 (min) 33.6208 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00101825 (min) 0.00188362 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:05 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:05 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:05 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0]
15:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3]
15:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 485.   0.]
 [  0.   0.   0.   0.   0.]
 [ 88.   0.   0. 282.   0.]
 [ 12.   0. 711.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:05 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:05 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08886470750988135
15:05 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:05 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:05 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 50 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 50 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 67 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
15:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
15:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [64, 0, 394, 42, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:05 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:05 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:05 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:05 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:05 INFO    opendrift.models.basemodel:2035: 2024-12-04 01:43:52.626553 - step 60 of 96 - 500 active elements (0 deactivated)
15:05 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:05 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:05 DEBUG   opendrift.models.basemodel:2054:               57.55917062285555 <- latitude  -> 57.77209446800692
15:05 DEBUG   opendrift.models.basemodel:2059:               10.511655048774706 <- longitude -> 10.71213558239636
15:05 DEBUG   opendrift.models.basemodel:2064:               -37.58568025055501   <- z ->   -0.1381060189690476
15:05 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 01:00:00 (before)
                2024-12-04 02:00:00 (after)
15:05 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 01:00:00) in space  (linearNDFast)
15:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:05 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 02:00:00) in space  (linearNDFast)
15:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:05 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 01:00:00, weight 0.27) and
                      after (2024-12-04 02:00:00, weight 0.73) in time
15:05 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.287875437929884 degrees.
15:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.287875437929884 degrees.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:05 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:05 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:05 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:05 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.673142 (min) 0.276014 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.137178 (min) 0.458756 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.282345 (min) -0.264859 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.0574 (min) -9.94335 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.57118 (min) -0.344225 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.34014 (min) 49.0043 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.76513 (min) 9.34646 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0456 (min) 33.3857 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00108616 (min) 0.00180796 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:05 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:05 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:05 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:05 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
15:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 2 0 2 0 2 0]
15:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0 3 0 3 0 3]
15:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 490.   0.]
 [  0.   0.   0.   0.   0.]
 [ 93.   0.   0. 308.   0.]
 [ 12.   0. 739.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:05 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:05 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09223905540115765
15:05 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:05 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:05 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:05 DEBUG   opendrift.models.oceandrift:609: 51 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 48 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 48 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 52 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 50 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 57 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 59 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 53 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:05 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:05 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
15:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
15:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [64, 0, 392, 44, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:05 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:05 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:05 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:05 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:05 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:05 INFO    opendrift.models.basemodel:2035: 2024-12-04 02:13:52.626553 - step 61 of 96 - 500 active elements (0 deactivated)
15:05 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:05 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:05 DEBUG   opendrift.models.basemodel:2054:               57.56151699652438 <- latitude  -> 57.773998646578285
15:05 DEBUG   opendrift.models.basemodel:2059:               10.511655048774706 <- longitude -> 10.71364090646274
15:05 DEBUG   opendrift.models.basemodel:2064:               -37.00292084958491   <- z ->   0.0
15:05 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 02:00:00 (before)
                2024-12-04 03:00:00 (after)
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:07 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x40x7) for time after (2024-12-04 03:00:00)
15:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 02:00:00) in space  (linearNDFast)
15:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 03:00:00) in space  (linearNDFast)
15:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 02:00:00, weight 0.77) and
                      after (2024-12-04 03:00:00, weight 0.23) in time
15:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.28637012086217 degrees.
15:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.28637012086217 degrees.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.725068 (min) 0.234873 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.154974 (min) 0.396265 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.236194 (min) -0.214563 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.2091 (min) -9.80136 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.03392 (min) 0.204274 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29523 (min) 51.4312 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.74289 (min) 9.43421 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0631 (min) 33.6681 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00102249 (min) 0.00152367 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:07 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:07 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:07 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
15:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 2 0 0 0 0 0 2 0 0]
15:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3 3 3 3 0 3 3]
15:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 498.   0.]
 [  0.   0.   0.   0.   0.]
 [ 95.   0.   0. 326.   0.]
 [ 13.   0. 760.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:07 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:07 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09363544320093307
15:07 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:07 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:07 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 67 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 51 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
15:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
15:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [59, 0, 396, 45, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:07 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:07 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:07 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 48 elements to seafloor.
15:07 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:07 INFO    opendrift.models.basemodel:2035: 2024-12-04 02:43:52.626553 - step 62 of 96 - 500 active elements (0 deactivated)
15:07 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:07 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:07 DEBUG   opendrift.models.basemodel:2054:               57.563818136868974 <- latitude  -> 57.77441984780226
15:07 DEBUG   opendrift.models.basemodel:2059:               10.511655048774706 <- longitude -> 10.718618506952167
15:07 DEBUG   opendrift.models.basemodel:2064:               -34.28405186701364   <- z ->   -0.1028070639006829
15:07 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 02:00:00 (before)
                2024-12-04 03:00:00 (after)
15:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 02:00:00) in space  (linearNDFast)
15:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 03:00:00) in space  (linearNDFast)
15:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 02:00:00, weight 0.27) and
                      after (2024-12-04 03:00:00, weight 0.73) in time
15:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.28139250714135 degrees.
15:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48835605585889 and -59.28139250714135 degrees.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.769161 (min) 0.2223 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.13208 (min) 0.35869 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.190035 (min) -0.165197 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.1758 (min) -9.62463 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.22726 (min) 0.639279 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.25715 (min) 54.359 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.7218 (min) 9.3132 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0704 (min) 32.9178 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000486386 (min) 0.00166994 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:07 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 48 elements to seafloor.
15:07 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:07 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 2]
15:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 0]
15:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 500.   0.]
 [  0.   0.   0.   0.   0.]
 [ 99.   0.   0. 348.   0.]
 [ 13.   0. 788.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:07 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:07 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09125383176236646
15:07 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:07 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:07 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:07 DEBUG   opendrift.models.oceandrift:609: 55 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 47 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 47 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 50 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 50 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 51 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:07 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
15:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
15:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [61, 0, 387, 52, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:07 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:07 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:07 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:07 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:07 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:07 INFO    opendrift.models.basemodel:2035: 2024-12-04 03:13:52.626553 - step 63 of 96 - 500 active elements (0 deactivated)
15:07 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:07 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:07 DEBUG   opendrift.models.basemodel:2054:               57.566258851475325 <- latitude  -> 57.775293757625235
15:07 DEBUG   opendrift.models.basemodel:2059:               10.50804681070417 <- longitude -> 10.721643221542465
15:07 DEBUG   opendrift.models.basemodel:2064:               -32.86631609699447   <- z ->   -0.025485016488432558
15:07 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 03:00:00 (before)
                2024-12-04 04:00:00 (after)
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:10 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:10 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x42x7) for time after (2024-12-04 04:00:00)
15:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 03:00:00) in space  (linearNDFast)
15:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 04:00:00) in space  (linearNDFast)
15:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 03:00:00, weight 0.77) and
                      after (2024-12-04 04:00:00, weight 0.23) in time
15:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491964223305565 and -59.27836779333769 degrees.
15:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.491964223305565 and -59.27836779333769 degrees.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.671271 (min) 0.209874 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.236446 (min) 0.316511 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.159397 (min) -0.130109 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.1961 (min) -9.55943 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.541973 (min) 1.01914 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.21484 (min) 57.7662 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.69633 (min) 9.28695 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.0808 (min) 33.1913 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000586553 (min) 0.00163945 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:10 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:10 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0 2 0]
15:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3 0 3]
15:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 502.   0.]
 [  0.   0.   0.   0.   0.]
 [104.   0.   0. 371.   0.]
 [ 13.   0. 806.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:10 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:10 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09074545997993885
15:10 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:10 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:10 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:10 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
15:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
15:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [64, 0, 378, 58, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:10 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:10 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:10 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:10 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:10 INFO    opendrift.models.basemodel:2035: 2024-12-04 03:43:52.626553 - step 64 of 96 - 500 active elements (0 deactivated)
15:10 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:10 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:10 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.77524643999435
15:10 DEBUG   opendrift.models.basemodel:2059:               10.487749643138065 <- longitude -> 10.724604982733403
15:10 DEBUG   opendrift.models.basemodel:2064:               -36.069365736601064   <- z ->   0.0
15:10 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 03:00:00 (before)
                2024-12-04 04:00:00 (after)
15:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 03:00:00) in space  (linearNDFast)
15:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 04:00:00) in space  (linearNDFast)
15:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 03:00:00, weight 0.27) and
                      after (2024-12-04 04:00:00, weight 0.73) in time
15:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.51226139743656 and -59.27540602749173 degrees.
15:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.51226139743656 and -59.27540602749173 degrees.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.846783 (min) 0.187579 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.214016 (min) 0.32295 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.151368 (min) -0.103757 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.2415 (min) -9.62379 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.00505071 (min) 1.3035 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.1729 (min) 58.4034 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.67133 (min) 9.32181 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1062 (min) 33.3115 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00139132 (min) 0.00149607 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:10 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:10 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:10 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 0]
15:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 3]
15:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 506.   0.]
 [  0.   0.   0.   0.   0.]
 [106.   0.   0. 391.   0.]
 [ 13.   0. 822.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:10 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:10 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09132628381463859
15:10 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:10 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:10 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:10 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 76 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 76 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:10 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:10 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
15:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
15:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [62, 0, 372, 66, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:10 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:10 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:10 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:10 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:10 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:10 INFO    opendrift.models.basemodel:2035: 2024-12-04 04:13:52.626553 - step 65 of 96 - 500 active elements (0 deactivated)
15:10 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:10 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:10 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.77458607642244
15:10 DEBUG   opendrift.models.basemodel:2059:               10.464329653460329 <- longitude -> 10.726333210795696
15:10 DEBUG   opendrift.models.basemodel:2064:               -36.40534619842154   <- z ->   -0.07866042479644512
15:10 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 04:00:00 (before)
                2024-12-04 05:00:00 (after)
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:12 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:12 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x44x7) for time after (2024-12-04 05:00:00)
15:12 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 04:00:00) in space  (linearNDFast)
15:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:12 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 05:00:00) in space  (linearNDFast)
15:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:12 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 04:00:00, weight 0.77) and
                      after (2024-12-04 05:00:00, weight 0.23) in time
15:12 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.53568138614849 and -59.273677794556804 degrees.
15:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.53568138614849 and -59.273677794556804 degrees.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.686094 (min) 0.187313 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.274749 (min) 0.331034 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.154541 (min) -0.0889491 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -11.1505 (min) -9.64239 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.713794 (min) 1.69636 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.1367 (min) 59.6799 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.64564 (min) 9.59659 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1179 (min) 34.0043 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000904951 (min) 0.00132995 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:12 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 67 elements to seafloor.
15:12 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:12 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
15:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 0 0 2 0]
15:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 3 3 0 3]
15:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 509.   0.]
 [  0.   0.   0.   0.   0.]
 [112.   0.   0. 412.   0.]
 [ 13.   0. 839.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:12 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:12 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.09027826039484083
15:12 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:12 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:12 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:12 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 52 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 84 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 84 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 86 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 86 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 87 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 87 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 87 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 87 elements to seafloor.
15:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
15:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
15:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 364, 71, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:12 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:12 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:12 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:12 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:12 INFO    opendrift.models.basemodel:2035: 2024-12-04 04:43:52.626553 - step 66 of 96 - 500 active elements (0 deactivated)
15:12 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:12 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:12 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.773357285284376
15:12 DEBUG   opendrift.models.basemodel:2059:               10.444591971572875 <- longitude -> 10.724893453842842
15:12 DEBUG   opendrift.models.basemodel:2064:               -33.90548738970894   <- z ->   0.0
15:12 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 04:00:00 (before)
                2024-12-04 05:00:00 (after)
15:12 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 04:00:00) in space  (linearNDFast)
15:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:12 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 05:00:00) in space  (linearNDFast)
15:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:12 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 04:00:00, weight 0.27) and
                      after (2024-12-04 05:00:00, weight 0.73) in time
15:12 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.55541907284572 and -59.275117558918296 degrees.
15:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.55541907284572 and -59.275117558918296 degrees.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.924375 (min) 0.210499 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.285232 (min) 0.383252 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.175884 (min) -0.0919978 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.8946 (min) -9.52947 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 1.63372 (min) 2.27587 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.10837 (min) 57.9531 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.61916 (min) 9.71084 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.115 (min) 34.1962 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000716645 (min) 0.00137744 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:12 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:12 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:12 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 0 0]
15:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 3 3]
15:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 513.   0.]
 [  0.   0.   0.   0.   0.]
 [115.   0.   0. 430.   0.]
 [ 13.   0. 855.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:12 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:12 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08778696469743048
15:12 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:12 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:12 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 76 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 76 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 76 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 76 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 86 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 86 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 86 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 86 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 86 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 86 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:12 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:12 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
15:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
15:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [64, 0, 361, 75, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:12 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:12 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:12 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:12 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:12 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:12 INFO    opendrift.models.basemodel:2035: 2024-12-04 05:13:52.626553 - step 67 of 96 - 500 active elements (0 deactivated)
15:12 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:12 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:12 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.774890671355685
15:12 DEBUG   opendrift.models.basemodel:2059:               10.425684920285105 <- longitude -> 10.723931279724916
15:12 DEBUG   opendrift.models.basemodel:2064:               -35.752293806318015   <- z ->   0.0
15:12 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 05:00:00 (before)
                2024-12-04 06:00:00 (after)
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:14 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:14 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x46x7) for time after (2024-12-04 06:00:00)
15:14 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 05:00:00) in space  (linearNDFast)
15:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:14 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 06:00:00) in space  (linearNDFast)
15:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:14 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 05:00:00, weight 0.77) and
                      after (2024-12-04 06:00:00, weight 0.23) in time
15:14 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.574326131874514 and -59.27607972350817 degrees.
15:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.574326131874514 and -59.27607972350817 degrees.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:14 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:14 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.80129 (min) 0.228235 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.348507 (min) 0.406978 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.20328 (min) -0.108999 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.6028 (min) -9.27896 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 2.11406 (min) 2.69677 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.09072 (min) 55.5485 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.59174 (min) 9.41019 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1275 (min) 33.6697 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.0010983 (min) 0.00120914 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:14 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:14 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:14 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
15:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 0 0 2 2 2]
15:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 3 3 0 0 0]
15:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 517.   0.]
 [  0.   0.   0.   0.   0.]
 [121.   0.   0. 444.   0.]
 [ 13.   0. 869.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:14 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:14 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08523156294967624
15:14 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:14 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:14 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:14 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 84 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 84 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 85 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 85 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 86 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 86 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 87 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 87 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 87 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 87 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 88 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 88 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 89 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 89 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 90 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 90 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 91 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 91 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 91 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 91 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 92 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 92 elements to seafloor.
15:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 25
15:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 25 elements
15:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [66, 0, 367, 67, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:14 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:14 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:14 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:14 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:14 INFO    opendrift.models.basemodel:2035: 2024-12-04 05:43:52.626553 - step 68 of 96 - 500 active elements (0 deactivated)
15:14 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:14 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:14 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.77427927999494
15:14 DEBUG   opendrift.models.basemodel:2059:               10.403945183716154 <- longitude -> 10.720793369181154
15:14 DEBUG   opendrift.models.basemodel:2064:               -33.23962472958331   <- z ->   0.0
15:14 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 05:00:00 (before)
                2024-12-04 06:00:00 (after)
15:14 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 05:00:00) in space  (linearNDFast)
15:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:14 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 06:00:00) in space  (linearNDFast)
15:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:14 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 05:00:00, weight 0.27) and
                      after (2024-12-04 06:00:00, weight 0.73) in time
15:14 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5960658636443 and -59.279217642025266 degrees.
15:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5960658636443 and -59.279217642025266 degrees.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:14 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:14 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:14 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.95753 (min) 0.310728 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.31033 (min) 0.507689 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.245501 (min) -0.143027 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -10.2248 (min) -8.79906 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 2.54712 (min) 3.07884 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.09072 (min) 55.395 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.56322 (min) 9.67214 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1372 (min) 34.1162 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000959239 (min) 0.00124839 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:14 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:14 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:14 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:14 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 0]
15:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3]
15:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 519.   0.]
 [  0.   0.   0.   0.   0.]
 [125.   0.   0. 457.   0.]
 [ 13.   0. 894.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:14 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:14 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.08159353223605799
15:14 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:14 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:14 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:14 DEBUG   opendrift.models.oceandrift:609: 52 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 71 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 71 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 72 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 72 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 73 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 73 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 74 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 74 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 75 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 75 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 77 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 77 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 78 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 78 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 79 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 79 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 80 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 80 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 81 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 81 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 82 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 82 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:14 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:14 DEBUG   opendrift.models.oceandrift:627: 83 elements reached seafloor, interacting with bottom
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 83 elements to seafloor.
15:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 34
15:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 34 elements
15:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [68, 0, 383, 49, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:14 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:14 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:14 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:14 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:14 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:14 INFO    opendrift.models.basemodel:2035: 2024-12-04 06:13:52.626553 - step 69 of 96 - 500 active elements (0 deactivated)
15:14 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:14 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:14 DEBUG   opendrift.models.basemodel:2054:               57.56642879113576 <- latitude  -> 57.77339466661797
15:14 DEBUG   opendrift.models.basemodel:2059:               10.382553976465593 <- longitude -> 10.715550175979393
15:14 DEBUG   opendrift.models.basemodel:2064:               -35.61878967285156   <- z ->   0.0
15:14 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 06:00:00 (before)
                2024-12-04 07:00:00 (after)
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:16 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:16 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x47x7) for time after (2024-12-04 07:00:00)
15:16 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 06:00:00) in space  (linearNDFast)
15:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:16 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 07:00:00) in space  (linearNDFast)
15:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:16 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 06:00:00, weight 0.77) and
                      after (2024-12-04 07:00:00, weight 0.23) in time
15:16 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.61745708112757 and -59.28446084375877 degrees.
15:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.61745708112757 and -59.28446084375877 degrees.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:16 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:16 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.934263 (min) 0.371714 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.312095 (min) 0.566943 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.287492 (min) -0.18146 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.8603 (min) -8.46801 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 2.8121 (min) 3.47201 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.09072 (min) 55.985 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.53334 (min) 9.87172 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1468 (min) 34.5014 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00106457 (min) 0.00177923 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:16 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:16 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:16 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
15:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
15:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
15:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 519.   0.]
 [  0.   0.   0.   0.   0.]
 [127.   0.   0. 471.   0.]
 [ 13.   0. 928.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:16 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:16 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0778509223053846
15:16 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:16 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:16 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:16 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 41
15:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 41 elements
15:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [70, 0, 406, 24, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:16 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:16 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:16 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:16 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:16 INFO    opendrift.models.basemodel:2035: 2024-12-04 06:43:52.626553 - step 70 of 96 - 500 active elements (0 deactivated)
15:16 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:16 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:16 DEBUG   opendrift.models.basemodel:2054:               57.56864994035871 <- latitude  -> 57.77508995819029
15:16 DEBUG   opendrift.models.basemodel:2059:               10.362438842536287 <- longitude -> 10.71034692214512
15:16 DEBUG   opendrift.models.basemodel:2064:               -37.328483803647   <- z ->   0.0
15:16 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 06:00:00 (before)
                2024-12-04 07:00:00 (after)
15:16 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 06:00:00) in space  (linearNDFast)
15:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:16 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 07:00:00) in space  (linearNDFast)
15:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:16 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 06:00:00, weight 0.27) and
                      after (2024-12-04 07:00:00, weight 0.73) in time
15:16 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6375722157028 and -59.28966409327266 degrees.
15:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6375722157028 and -59.28966409327266 degrees.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:16 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:16 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:16 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:16 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:16 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:16 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.01249 (min) 0.427492 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.321773 (min) 0.621351 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.330392 (min) -0.226442 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.5247 (min) -8.26965 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 2.94672 (min) 3.64278 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.09072 (min) 59.5448 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.50187 (min) 9.81534 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1545 (min) 34.4547 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000808074 (min) 0.0015384 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:16 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:16 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
15:16 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:16 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0]
15:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3]
15:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 523.   0.]
 [  0.   0.   0.   0.   0.]
 [128.   0.   0. 487.   0.]
 [ 13.   0. 969.   0.   0.]
 [  0.   0.   0.   0.   0.]]
15:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:16 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:16 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07311506047518193
15:16 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:16 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:16 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 29 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 37 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 37 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 46 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 39 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 39 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 45 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 45 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 47 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:16 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:16 DEBUG   opendrift.models.oceandrift:627: 47 elements reached seafloor, interacting with bottom
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 47 elements to seafloor.
15:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 38
15:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 38 elements
15:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [67, 0, 424, 9, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:16 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:16 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:16 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:16 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:16 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:16 INFO    opendrift.models.basemodel:2035: 2024-12-04 07:13:52.626553 - step 71 of 96 - 500 active elements (0 deactivated)
15:16 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:16 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:16 DEBUG   opendrift.models.basemodel:2054:               57.571263858450514 <- latitude  -> 57.779524977920715
15:16 DEBUG   opendrift.models.basemodel:2059:               10.342559097459523 <- longitude -> 10.705763372590644
15:16 DEBUG   opendrift.models.basemodel:2064:               -34.254832281938086   <- z ->   -0.13914663627103507
15:16 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:16 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:16 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:16 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 07:00:00 (before)
                2024-12-04 08:00:00 (after)
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:19 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:19 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x49x7) for time after (2024-12-04 08:00:00)
15:19 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 07:00:00) in space  (linearNDFast)
15:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:19 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 08:00:00) in space  (linearNDFast)
15:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
15:19 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 07:00:00, weight 0.77) and
                      after (2024-12-04 08:00:00, weight 0.23) in time
15:19 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6574519710084 and -59.2942476317692 degrees.
15:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6574519710084 and -59.2942476317692 degrees.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:19 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:19 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.999221 (min) 0.436434 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.331188 (min) 0.642935 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.37199 (min) -0.272596 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.39467 (min) -7.95805 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.17097 (min) 3.85461 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.09072 (min) 61.3242 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.47156 (min) 9.84413 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1706 (min) 34.57 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000817944 (min) 0.00159663 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:19 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:19 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:19 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
15:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 0 0 2 0 2]
15:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 3 3 0 3 0]
15:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 132.    0.    0.  506.    0.]
 [  13.    0. 1007.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:19 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:19 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07334570527466244
15:19 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:19 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:19 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:19 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 47 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 54 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 25 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 36
15:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 36 elements
15:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [66, 0, 434, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:19 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:19 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:19 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:19 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:19 INFO    opendrift.models.basemodel:2035: 2024-12-04 07:43:52.626553 - step 72 of 96 - 500 active elements (0 deactivated)
15:19 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:19 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:19 DEBUG   opendrift.models.basemodel:2054:               57.57426363115795 <- latitude  -> 57.78111456919094
15:19 DEBUG   opendrift.models.basemodel:2059:               10.324539629811762 <- longitude -> 10.701591436051608
15:19 DEBUG   opendrift.models.basemodel:2064:               -36.14846853875859   <- z ->   0.0
15:19 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 07:00:00 (before)
                2024-12-04 08:00:00 (after)
15:19 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 07:00:00) in space  (linearNDFast)
15:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:19 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 08:00:00) in space  (linearNDFast)
15:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:19 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 07:00:00, weight 0.27) and
                      after (2024-12-04 08:00:00, weight 0.73) in time
15:19 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.67547143606757 and -59.29841958765219 degrees.
15:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.67547143606757 and -59.29841958765219 degrees.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:19 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:19 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:19 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:19 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.02424 (min) 0.509132 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.310011 (min) 0.653006 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.410535 (min) -0.320127 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.46773 (min) -7.77539 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.59408 (min) 4.15376 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.16705 (min) 65.1787 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.45791 (min) 9.81874 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1804 (min) 34.451 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000754804 (min) 0.00172689 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:19 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:19 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:19 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:19 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
15:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2]
15:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0]
15:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  529.    0.]
 [   0.    0.    0.    0.    0.]
 [ 135.    0.    0.  528.    0.]
 [  13.    0. 1043.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:19 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:19 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07659729209189103
15:19 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:19 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:19 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:19 DEBUG   opendrift.models.oceandrift:609: 53 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:19 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:19 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
15:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
15:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [68, 0, 432, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:19 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:19 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:19 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:19 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:19 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:19 INFO    opendrift.models.basemodel:2035: 2024-12-04 08:13:52.626553 - step 73 of 96 - 500 active elements (0 deactivated)
15:19 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:19 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:19 DEBUG   opendrift.models.basemodel:2054:               57.57790177386182 <- latitude  -> 57.78148318783317
15:19 DEBUG   opendrift.models.basemodel:2059:               10.30405355693792 <- longitude -> 10.701297645812915
15:19 DEBUG   opendrift.models.basemodel:2064:               -38.43514149168511   <- z ->   0.0
15:19 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:19 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 08:00:00 (before)
                2024-12-04 09:00:00 (after)
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:21 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:21 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x51x7) for time after (2024-12-04 09:00:00)
15:21 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 08:00:00) in space  (linearNDFast)
15:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 09:00:00) in space  (linearNDFast)
15:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:21 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 08:00:00, weight 0.77) and
                      after (2024-12-04 09:00:00, weight 0.23) in time
15:21 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.695957515072216 and -59.29871337043445 degrees.
15:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.695957515072216 and -59.29871337043445 degrees.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:21 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:21 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.91438 (min) 0.426359 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.309626 (min) 0.641896 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.451467 (min) -0.368355 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -9.27553 (min) -7.61081 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.86604 (min) 4.4366 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.27097 (min) 68.603 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.44783 (min) 9.84005 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1883 (min) 34.5653 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000717736 (min) 0.00185136 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:21 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:21 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:21 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 2 2 2]
15:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 0 0 0]
15:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  531.    0.]
 [   0.    0.    0.    0.    0.]
 [ 140.    0.    0.  551.    0.]
 [  13.    0. 1067.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:21 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:21 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0760071760926079
15:21 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:21 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:21 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:21 DEBUG   opendrift.models.oceandrift:609: 49 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 48 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
15:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
15:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [71, 0, 429, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:21 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:21 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:21 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:21 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:21 INFO    opendrift.models.basemodel:2035: 2024-12-04 08:43:52.626553 - step 74 of 96 - 500 active elements (0 deactivated)
15:21 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:21 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:21 DEBUG   opendrift.models.basemodel:2054:               57.58257709002294 <- latitude  -> 57.78594942591375
15:21 DEBUG   opendrift.models.basemodel:2059:               10.27796183100706 <- longitude -> 10.702774990136176
15:21 DEBUG   opendrift.models.basemodel:2064:               -35.918661403686535   <- z ->   0.0
15:21 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 08:00:00 (before)
                2024-12-04 09:00:00 (after)
15:21 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 08:00:00) in space  (linearNDFast)
15:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:21 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 09:00:00) in space  (linearNDFast)
15:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:21 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 08:00:00, weight 0.27) and
                      after (2024-12-04 09:00:00, weight 0.73) in time
15:21 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.72204924375665 and -59.29723602125293 degrees.
15:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.72204924375665 and -59.29723602125293 degrees.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:21 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:21 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:21 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.974363 (min) 0.454775 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.319113 (min) 0.622963 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.496285 (min) -0.416345 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.78852 (min) -7.43909 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.064 (min) 4.66988 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.42375 (min) 68.4443 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.44423 (min) 9.832 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.1984 (min) 34.5414 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000911326 (min) 0.00203073 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:21 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:21 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:21 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:21 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2 0]
15:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0 3]
15:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  533.    0.]
 [   0.    0.    0.    0.    0.]
 [ 144.    0.    0.  572.    0.]
 [  13.    0. 1090.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:21 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:21 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07157652232784363
15:21 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:21 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:21 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:21 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 44 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:21 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:21 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
15:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
15:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [73, 0, 427, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:21 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:21 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:21 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:21 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:21 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:21 INFO    opendrift.models.basemodel:2035: 2024-12-04 09:13:52.626553 - step 75 of 96 - 500 active elements (0 deactivated)
15:21 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:21 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:21 DEBUG   opendrift.models.basemodel:2054:               57.586429301492004 <- latitude  -> 57.789381145831484
15:21 DEBUG   opendrift.models.basemodel:2059:               10.252742613922365 <- longitude -> 10.706198855878487
15:21 DEBUG   opendrift.models.basemodel:2064:               -34.97314115215957   <- z ->   0.0
15:21 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 09:00:00 (before)
                2024-12-04 10:00:00 (after)
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:23 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:23 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x54x7) for time after (2024-12-04 10:00:00)
15:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 09:00:00) in space  (linearNDFast)
15:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 10:00:00) in space  (linearNDFast)
15:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
15:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 09:00:00, weight 0.77) and
                      after (2024-12-04 10:00:00, weight 0.23) in time
15:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.74726845736203 and -59.29381216112612 degrees.
15:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.74726845736203 and -59.29381216112612 degrees.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.861042 (min) 0.45249 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.335214 (min) 0.583607 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.53907 (min) -0.463112 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.3912 (min) -7.1175 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.06828 (min) 4.86112 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.60383 (min) 70.2154 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.42207 (min) 9.78867 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2067 (min) 34.5916 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000742293 (min) 0.00190735 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:23 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:23 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:23 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
15:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
15:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
15:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  533.    0.]
 [   0.    0.    0.    0.    0.]
 [ 145.    0.    0.  589.    0.]
 [  13.    0. 1109.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:23 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:23 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06796116421337223
15:23 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:23 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:23 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:23 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 43 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
15:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
15:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [74, 0, 426, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:23 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:23 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:23 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:23 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:23 INFO    opendrift.models.basemodel:2035: 2024-12-04 09:43:52.626553 - step 76 of 96 - 500 active elements (0 deactivated)
15:23 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:23 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:23 DEBUG   opendrift.models.basemodel:2054:               57.59044516559667 <- latitude  -> 57.787918128068554
15:23 DEBUG   opendrift.models.basemodel:2059:               10.233216434328146 <- longitude -> 10.713894242099956
15:23 DEBUG   opendrift.models.basemodel:2064:               -36.4697162110312   <- z ->   0.0
15:23 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 09:00:00 (before)
                2024-12-04 10:00:00 (after)
15:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 09:00:00) in space  (linearNDFast)
15:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 10:00:00) in space  (linearNDFast)
15:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 09:00:00, weight 0.27) and
                      after (2024-12-04 10:00:00, weight 0.73) in time
15:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.766794644362356 and -59.286116780068284 degrees.
15:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.766794644362356 and -59.286116780068284 degrees.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.04678 (min) 0.44384 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.345765 (min) 0.53825 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.579446 (min) -0.506632 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.12607 (min) -6.40619 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.98347 (min) 4.92719 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.83348 (min) 70.5916 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.41673 (min) 9.78689 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2236 (min) 34.6109 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000653961 (min) 0.00216503 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:23 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:23 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:23 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 2]
15:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 0]
15:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  534.    0.]
 [   0.    0.    0.    0.    0.]
 [ 150.    0.    0.  601.    0.]
 [  13.    0. 1121.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:23 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:23 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06460309879286286
15:23 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:23 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:23 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:23 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 41 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 45 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 25 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 25 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 25 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:23 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:23 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 26
15:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 26 elements
15:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [78, 0, 422, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:23 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:23 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:23 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:23 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:23 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:23 INFO    opendrift.models.basemodel:2035: 2024-12-04 10:13:52.626553 - step 77 of 96 - 500 active elements (0 deactivated)
15:23 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:23 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:23 DEBUG   opendrift.models.basemodel:2054:               57.594359159967766 <- latitude  -> 57.785278044895655
15:23 DEBUG   opendrift.models.basemodel:2059:               10.213469809696901 <- longitude -> 10.719873397753272
15:23 DEBUG   opendrift.models.basemodel:2064:               -36.443912828421354   <- z ->   0.0
15:23 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 10:00:00 (before)
                2024-12-04 11:00:00 (after)
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:25 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:25 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 50x55x7) for time after (2024-12-04 11:00:00)
15:25 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 10:00:00) in space  (linearNDFast)
15:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 11:00:00) in space  (linearNDFast)
15:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:25 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 10:00:00, weight 0.77) and
                      after (2024-12-04 11:00:00, weight 0.23) in time
15:25 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.78654127539684 and -59.28013762299898 degrees.
15:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.78654127539684 and -59.28013762299898 degrees.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:25 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.06642 (min) 0.418354 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.344324 (min) 0.515559 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.614316 (min) -0.545204 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.89594 (min) -6.22033 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.90878 (min) 5.10788 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.0545 (min) 70.0426 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.39522 (min) 9.78775 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2311 (min) 34.6136 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00108846 (min) 0.00217371 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:25 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:25 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:25 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
15:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
15:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  534.    0.]
 [   0.    0.    0.    0.    0.]
 [ 155.    0.    0.  626.    0.]
 [  13.    0. 1147.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:25 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:25 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06142026410826986
15:25 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:25 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:25 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:25 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 39 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 42 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
15:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
15:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [83, 0, 417, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:25 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:25 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:25 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:25 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:25 INFO    opendrift.models.basemodel:2035: 2024-12-04 10:43:52.626553 - step 78 of 96 - 500 active elements (0 deactivated)
15:25 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:25 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:25 DEBUG   opendrift.models.basemodel:2054:               57.59873830247011 <- latitude  -> 57.78393410446656
15:25 DEBUG   opendrift.models.basemodel:2059:               10.183095156056375 <- longitude -> 10.72447801184086
15:25 DEBUG   opendrift.models.basemodel:2064:               -36.11350101787641   <- z ->   0.0
15:25 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 10:00:00 (before)
                2024-12-04 11:00:00 (after)
15:25 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 10:00:00) in space  (linearNDFast)
15:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:25 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 11:00:00) in space  (linearNDFast)
15:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:25 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 10:00:00, weight 0.27) and
                      after (2024-12-04 11:00:00, weight 0.73) in time
15:25 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.81691593167935 and -59.27553300312384 degrees.
15:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.81691593167935 and -59.27553300312384 degrees.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:25 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.18501 (min) 0.382222 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.337443 (min) 0.484138 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.642563 (min) -0.578929 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.66272 (min) -5.98787 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.6486 (min) 5.35739 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.26911 (min) 73.0213 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.4068 (min) 9.79468 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2452 (min) 34.6175 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00137758 (min) 0.0021533 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:25 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:25 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
15:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0]
15:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3]
15:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  535.    0.]
 [   0.    0.    0.    0.    0.]
 [ 157.    0.    0.  636.    0.]
 [  13.    0. 1157.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:25 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:25 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.05846221366342772
15:25 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:25 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:25 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:25 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 36 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 35 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:25 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:25 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
15:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
15:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [84, 0, 416, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:25 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:25 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:25 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:25 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:25 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:25 INFO    opendrift.models.basemodel:2035: 2024-12-04 11:13:52.626553 - step 79 of 96 - 500 active elements (0 deactivated)
15:25 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:25 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:25 DEBUG   opendrift.models.basemodel:2054:               57.60242097400209 <- latitude  -> 57.78311945228888
15:25 DEBUG   opendrift.models.basemodel:2059:               10.157363701840636 <- longitude -> 10.724420504373116
15:25 DEBUG   opendrift.models.basemodel:2064:               -36.129158819659644   <- z ->   0.0
15:25 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 11:00:00 (before)
                2024-12-04 12:00:00 (after)
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:28 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:28 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x59x7) for time after (2024-12-04 12:00:00)
15:28 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 11:00:00) in space  (linearNDFast)
15:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:28 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 12:00:00) in space  (linearNDFast)
15:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
15:28 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 11:00:00, weight 0.77) and
                      after (2024-12-04 12:00:00, weight 0.23) in time
15:28 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.84264738421093 and -59.27559051046065 degrees.
15:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.84264738421093 and -59.27559051046065 degrees.
15:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:28 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:28 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:28 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:28 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:28 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:28 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.14755 (min) 0.348893 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.321975 (min) 0.469373 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.657737 (min) -0.599722 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.49106 (min) -5.71954 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.54542 (min) 5.50838 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.47499 (min) 75.4353 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.39309 (min) 9.77286 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2716 (min) 34.6135 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000959062 (min) 0.00228941 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:28 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:28 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:28 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:28 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:28 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:28 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:28 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
15:28 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0]
15:28 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3]
15:28 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  537.    0.]
 [   0.    0.    0.    0.    0.]
 [ 159.    0.    0.  648.    0.]
 [  13.    0. 1170.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:28 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:28 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:28 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.057240406995357665
15:28 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:28 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:28 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:28 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:28 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:28 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:28 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
15:28 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:28 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
15:28 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:28 INFO    opendrift.models.chemicaldrift:1861: partitioning: [84, 0, 416, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:28 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:28 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:28 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:28 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:28 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:28 INFO    opendrift.models.basemodel:2035: 2024-12-04 11:43:52.626553 - step 80 of 96 - 500 active elements (0 deactivated)
15:28 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:28 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:28 DEBUG   opendrift.models.basemodel:2054:               57.60666140814602 <- latitude  -> 57.77985807629092
15:28 DEBUG   opendrift.models.basemodel:2059:               10.122694130600532 <- longitude -> 10.72457410558546
15:28 DEBUG   opendrift.models.basemodel:2064:               -34.630278568261936   <- z ->   0.0
15:28 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:28 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 11:00:00 (before)
                2024-12-04 12:00:00 (after)
15:28 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 11:00:00) in space  (linearNDFast)
15:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:28 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 12:00:00) in space  (linearNDFast)
15:28 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:28 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 11:00:00, weight 0.27) and
                      after (2024-12-04 12:00:00, weight 0.73) in time
15:28 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.87731695688764 and -59.275436902310965 degrees.
15:28 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.87731695688764 and -59.275436902310965 degrees.
15:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:28 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:28 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:28 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:28 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:28 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:28 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:28 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:28 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:30 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:30 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:30 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:30 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:30 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:30 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:30 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:30 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.07769 (min) 0.37112 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.330277 (min) 0.447403 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.655206 (min) -0.604108 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.3679 (min) -5.37021 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.62928 (min) 5.62121 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.62092 (min) 75.8414 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.39953 (min) 9.74892 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2773 (min) 34.6244 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00103429 (min) 0.00208747 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:30 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:30 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:30 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:30 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:30 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:30 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:30 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
15:30 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
15:30 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
15:30 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  537.    0.]
 [   0.    0.    0.    0.    0.]
 [ 163.    0.    0.  664.    0.]
 [  13.    0. 1188.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:30 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:30 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:30 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.056098607558970254
15:30 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:30 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:30 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:30 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:30 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:30 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:30 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
15:30 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
15:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:30 INFO    opendrift.models.chemicaldrift:1861: partitioning: [88, 0, 412, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:30 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:30 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:30 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:30 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:30 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:30 INFO    opendrift.models.basemodel:2035: 2024-12-04 12:13:52.626553 - step 81 of 96 - 500 active elements (0 deactivated)
15:30 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:30 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:30 DEBUG   opendrift.models.basemodel:2054:               57.61006809782083 <- latitude  -> 57.780328480307176
15:30 DEBUG   opendrift.models.basemodel:2059:               10.090130452922029 <- longitude -> 10.724417834585799
15:30 DEBUG   opendrift.models.basemodel:2064:               -33.93151377919673   <- z ->   0.0
15:30 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:30 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:30 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:30 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:30 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:30 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:30 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 12:00:00 (before)
                2024-12-04 13:00:00 (after)
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:32 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:32 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x64x7) for time after (2024-12-04 13:00:00)
15:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 12:00:00) in space  (linearNDFast)
15:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 13:00:00) in space  (linearNDFast)
15:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 12:00:00, weight 0.77) and
                      after (2024-12-04 13:00:00, weight 0.23) in time
15:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.90988064259012 and -59.2755931738585 degrees.
15:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.90988064259012 and -59.2755931738585 degrees.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.07677 (min) 0.35578 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.324579 (min) 0.474833 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.640141 (min) -0.588853 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.2021 (min) -5.05734 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 3.79762 (min) 5.77867 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.79027 (min) 76.7547 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.38221 (min) 9.79847 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2831 (min) 34.6192 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000960387 (min) 0.00217059 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:32 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:32 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:32 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
15:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
15:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  537.    0.]
 [   0.    0.    0.    0.    0.]
 [ 168.    0.    0.  680.    0.]
 [  13.    0. 1204.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:32 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:32 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0559862295609255
15:32 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:32 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:32 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:32 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 1 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 1 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
15:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
15:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [93, 0, 406, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:32 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:32 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:32 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:32 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:32 INFO    opendrift.models.basemodel:2035: 2024-12-04 12:43:52.626553 - step 82 of 96 - 500 active elements (0 deactivated)
15:32 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:32 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:32 DEBUG   opendrift.models.basemodel:2054:               57.61433429358192 <- latitude  -> 57.77924030587969
15:32 DEBUG   opendrift.models.basemodel:2059:               10.068271105433825 <- longitude -> 10.730902554908022
15:32 DEBUG   opendrift.models.basemodel:2064:               -37.58710922719996   <- z ->   0.0
15:32 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 12:00:00 (before)
                2024-12-04 13:00:00 (after)
15:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 12:00:00) in space  (linearNDFast)
15:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 13:00:00) in space  (linearNDFast)
15:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 12:00:00, weight 0.27) and
                      after (2024-12-04 13:00:00, weight 0.73) in time
15:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.93173999546084 and -59.26910845189754 degrees.
15:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.93173999546084 and -59.26910845189754 degrees.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.0754 (min) 0.407021 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.319597 (min) 0.402365 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.607215 (min) -0.552681 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.00758 (min) -4.98599 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.13002 (min) 5.87315 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.92546 (min) 79.5921 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.38741 (min) 9.77101 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3024 (min) 34.6462 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000878435 (min) 0.00213231 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:32 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:32 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:32 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
15:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0]
15:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3]
15:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  538.    0.]
 [   0.    0.    0.    0.    0.]
 [ 170.    0.    0.  693.    0.]
 [  13.    0. 1216.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:32 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:32 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.05601060384066855
15:32 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:32 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:32 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 2 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:32 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:32 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
15:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
15:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [94, 0, 405, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:32 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:32 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:32 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:32 DEBUG   opendrift.models.basemodel:754: Lifting 2 elements to seafloor.
15:32 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:32 INFO    opendrift.models.basemodel:2035: 2024-12-04 13:13:52.626553 - step 83 of 96 - 500 active elements (0 deactivated)
15:32 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:32 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:32 DEBUG   opendrift.models.basemodel:2054:               57.617670171125255 <- latitude  -> 57.77920554114609
15:32 DEBUG   opendrift.models.basemodel:2059:               10.047616213822597 <- longitude -> 10.735908689931815
15:32 DEBUG   opendrift.models.basemodel:2064:               -38.01257517528041   <- z ->   0.0
15:32 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 13:00:00 (before)
                2024-12-04 14:00:00 (after)
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:34 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:34 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 55x66x7) for time after (2024-12-04 14:00:00)
15:34 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 13:00:00) in space  (linearNDFast)
15:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:34 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 14:00:00) in space  (linearNDFast)
15:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:34 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 13:00:00, weight 0.77) and
                      after (2024-12-04 14:00:00, weight 0.23) in time
15:34 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.952394881064535 and -59.264102319630595 degrees.
15:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.952394881064535 and -59.264102319630595 degrees.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:34 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:34 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.01572 (min) 0.392789 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.321144 (min) 0.378294 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.562718 (min) -0.506264 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.96765 (min) -5.0738 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.45484 (min) 6.02527 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.0544 (min) 80.6907 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.38446 (min) 9.76606 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.318 (min) 34.6476 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000758965 (min) 0.00215225 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:34 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:34 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:34 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 2]
15:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 0]
15:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  538.    0.]
 [   0.    0.    0.    0.    0.]
 [ 177.    0.    0.  711.    0.]
 [  13.    0. 1235.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:34 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:34 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.05682743877050486
15:34 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:34 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:34 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 33 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 9 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
15:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
15:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [101, 0, 397, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:34 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:34 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:34 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:34 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:34 INFO    opendrift.models.basemodel:2035: 2024-12-04 13:43:52.626553 - step 84 of 96 - 500 active elements (0 deactivated)
15:34 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:34 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:34 DEBUG   opendrift.models.basemodel:2054:               57.620720506117785 <- latitude  -> 57.77937423094053
15:34 DEBUG   opendrift.models.basemodel:2059:               10.027275652773671 <- longitude -> 10.741477540597069
15:34 DEBUG   opendrift.models.basemodel:2064:               -36.92897951513852   <- z ->   0.0
15:34 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 13:00:00 (before)
                2024-12-04 14:00:00 (after)
15:34 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 13:00:00) in space  (linearNDFast)
15:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:34 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 14:00:00) in space  (linearNDFast)
15:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:34 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 13:00:00, weight 0.27) and
                      after (2024-12-04 14:00:00, weight 0.73) in time
15:34 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.97273545212726 and -59.25853348660562 degrees.
15:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.97273545212726 and -59.25853348660562 degrees.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:34 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:34 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:34 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:34 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:34 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:34 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.987463 (min) 0.403085 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.330422 (min) 0.356921 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.50509 (min) -0.449706 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.15839 (min) -5.16965 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.77871 (min) 6.26033 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 79.458 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.37564 (min) 9.77972 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3309 (min) 34.6103 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000601104 (min) 0.00218606 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:34 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:34 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:34 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:34 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
15:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2]
15:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0]
15:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  539.    0.]
 [   0.    0.    0.    0.    0.]
 [ 178.    0.    0.  732.    0.]
 [  13.    0. 1255.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:34 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:34 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06043874745003055
15:34 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:34 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:34 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:34 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:34 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:34 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
15:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
15:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [101, 0, 396, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:34 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:34 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:34 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:34 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:34 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:34 INFO    opendrift.models.basemodel:2035: 2024-12-04 14:13:52.626553 - step 85 of 96 - 500 active elements (0 deactivated)
15:34 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:34 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:34 DEBUG   opendrift.models.basemodel:2054:               57.62367645930516 <- latitude  -> 57.77840513959755
15:34 DEBUG   opendrift.models.basemodel:2059:               10.006452398863187 <- longitude -> 10.753525667453358
15:34 DEBUG   opendrift.models.basemodel:2064:               -36.52208712194721   <- z ->   0.0
15:34 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:34 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:34 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:34 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 14:00:00 (before)
                2024-12-04 15:00:00 (after)
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:37 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:37 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 55x70x7) for time after (2024-12-04 15:00:00)
15:37 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 14:00:00) in space  (linearNDFast)
15:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:37 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 15:00:00) in space  (linearNDFast)
15:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
15:37 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 14:00:00, weight 0.77) and
                      after (2024-12-04 15:00:00, weight 0.23) in time
15:37 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.99355869875376 and -59.24648535104671 degrees.
15:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.99355869875376 and -59.24648535104671 degrees.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:37 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:37 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.05903 (min) 0.411813 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.328121 (min) 0.313054 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.448739 (min) -0.393064 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.28328 (min) -5.28019 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.79625 (min) 6.36556 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 77.5984 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.36993 (min) 9.78623 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3389 (min) 34.6157 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000947476 (min) 0.00176092 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:37 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:37 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
15:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 2 2]
15:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 0 0]
15:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  539.    0.]
 [   0.    0.    0.    0.    0.]
 [ 186.    0.    0.  751.    0.]
 [  13.    0. 1274.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:37 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:37 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06160836689284542
15:37 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:37 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:37 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:37 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 3 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 3 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 4 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 4 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 5 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 5 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 31 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 37 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 40 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 38 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:37 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
15:37 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
15:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:37 INFO    opendrift.models.chemicaldrift:1861: partitioning: [109, 0, 385, 6, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:37 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:37 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:37 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:37 INFO    opendrift.models.basemodel:2035: 2024-12-04 14:43:52.626553 - step 86 of 96 - 500 active elements (0 deactivated)
15:37 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:37 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:37 DEBUG   opendrift.models.basemodel:2054:               57.62625356393537 <- latitude  -> 57.77823329850334
15:37 DEBUG   opendrift.models.basemodel:2059:               9.98564158366931 <- longitude -> 10.758644582771945
15:37 DEBUG   opendrift.models.basemodel:2064:               -35.061141293091985   <- z ->   0.0
15:37 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 14:00:00 (before)
                2024-12-04 15:00:00 (after)
15:37 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 14:00:00) in space  (linearNDFast)
15:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:37 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 15:00:00) in space  (linearNDFast)
15:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:37 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 14:00:00, weight 0.27) and
                      after (2024-12-04 15:00:00, weight 0.73) in time
15:37 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.014369514422384 and -59.2413664439894 degrees.
15:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.014369514422384 and -59.2413664439894 degrees.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:37 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:37 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:37 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:37 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.991873 (min) 0.395624 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.322701 (min) 0.341436 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.394106 (min) -0.338097 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.50279 (min) -5.55042 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.71351 (min) 6.30846 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 75.3688 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.33771 (min) 9.77122 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3389 (min) 34.6538 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000996366 (min) 0.00187259 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:37 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:37 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:37 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 2]
15:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 0]
15:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  539.    0.]
 [   0.    0.    0.    0.    0.]
 [ 193.    0.    0.  764.    0.]
 [  13.    0. 1284.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:37 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:37 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06349658981132938
15:37 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:37 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:37 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 30 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 6 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 6 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 7 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 7 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:37 DEBUG   opendrift.models.oceandrift:627: 13 elements reached seafloor, interacting with bottom
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 13 elements to seafloor.
15:37 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
15:37 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
15:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:37 INFO    opendrift.models.chemicaldrift:1861: partitioning: [116, 0, 376, 8, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:37 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:37 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:37 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:37 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:37 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:37 INFO    opendrift.models.basemodel:2035: 2024-12-04 15:13:52.626553 - step 87 of 96 - 500 active elements (0 deactivated)
15:37 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:37 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:37 DEBUG   opendrift.models.basemodel:2054:               57.62976924804371 <- latitude  -> 57.77846156059032
15:37 DEBUG   opendrift.models.basemodel:2059:               9.96639694730185 <- longitude -> 10.766351577908134
15:37 DEBUG   opendrift.models.basemodel:2064:               -34.988351824007545   <- z ->   0.0
15:37 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:37 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 15:00:00 (before)
                2024-12-04 16:00:00 (after)
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:40 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:40 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 56x73x7) for time after (2024-12-04 16:00:00)
15:40 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 15:00:00) in space  (linearNDFast)
15:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:40 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 16:00:00) in space  (linearNDFast)
15:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:40 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 15:00:00, weight 0.77) and
                      after (2024-12-04 16:00:00, weight 0.23) in time
15:40 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.03361416677848 and -59.23365943669574 degrees.
15:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.03361416677848 and -59.23365943669574 degrees.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:40 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:40 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -1.01562 (min) 0.34281 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.330549 (min) 0.389051 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.34978 (min) -0.291191 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.7285 (min) -5.64225 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.61764 (min) 6.37421 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 74.7319 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.34796 (min) 9.74329 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3274 (min) 34.6556 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000481699 (min) 0.00165791 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:40 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:40 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2]
15:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0]
15:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  539.    0.]
 [   0.    0.    0.    0.    0.]
 [ 199.    0.    0.  771.    0.]
 [  13.    0. 1289.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:40 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:40 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06515173191454159
15:40 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:40 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:40 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:40 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 8 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 8 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 9 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 9 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 10 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 10 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 11 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 11 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 12 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 12 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 14 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 14 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 34 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 15 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 15 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
15:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
15:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [122, 0, 364, 14, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:40 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:40 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:40 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:40 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:40 INFO    opendrift.models.basemodel:2035: 2024-12-04 15:43:52.626553 - step 88 of 96 - 500 active elements (0 deactivated)
15:40 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:40 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:40 DEBUG   opendrift.models.basemodel:2054:               57.63209409463337 <- latitude  -> 57.77891026630055
15:40 DEBUG   opendrift.models.basemodel:2059:               9.94891075789745 <- longitude -> 10.773861686192392
15:40 DEBUG   opendrift.models.basemodel:2064:               -37.86519183705528   <- z ->   0.0
15:40 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 15:00:00 (before)
                2024-12-04 16:00:00 (after)
15:40 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 15:00:00) in space  (linearNDFast)
15:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:40 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 16:00:00) in space  (linearNDFast)
15:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:40 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 15:00:00, weight 0.27) and
                      after (2024-12-04 16:00:00, weight 0.73) in time
15:40 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05110035814839 and -59.22614933481145 degrees.
15:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05110035814839 and -59.22614933481145 degrees.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:40 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:40 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:40 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:40 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.993616 (min) 0.33759 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.321879 (min) 0.318702 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.316824 (min) -0.254526 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.9414 (min) -5.65579 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.55361 (min) 6.43515 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 73.311 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.33238 (min) 9.7053 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.359 (min) 34.6557 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000500187 (min) 0.00187398 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:40 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:40 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:40 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:40 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
15:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0 2 2 0 2 2 2]
15:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3 0 0 3 0 0 0]
15:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  541.    0.]
 [   0.    0.    0.    0.    0.]
 [ 208.    0.    0.  787.    0.]
 [  13.    0. 1299.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:40 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:40 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06616584881889147
15:40 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:40 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:40 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 16 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 16 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 17 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 17 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 18 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 18 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 19 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 32 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 23 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 23 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:40 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:40 DEBUG   opendrift.models.oceandrift:627: 29 elements reached seafloor, interacting with bottom
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
15:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
15:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
15:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 353, 18, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:40 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:40 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:40 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:40 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:40 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:40 INFO    opendrift.models.basemodel:2035: 2024-12-04 16:13:52.626553 - step 89 of 96 - 500 active elements (0 deactivated)
15:40 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:40 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:40 DEBUG   opendrift.models.basemodel:2054:               57.63452468324223 <- latitude  -> 57.77876853507061
15:40 DEBUG   opendrift.models.basemodel:2059:               9.937635258509417 <- longitude -> 10.782456649749895
15:40 DEBUG   opendrift.models.basemodel:2064:               -35.65144080664476   <- z ->   0.0
15:40 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:40 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 16:00:00 (before)
                2024-12-04 17:00:00 (after)
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:42 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:42 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 57x76x7) for time after (2024-12-04 17:00:00)
15:42 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 16:00:00) in space  (linearNDFast)
15:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:42 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 17:00:00) in space  (linearNDFast)
15:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:42 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 16:00:00, weight 0.77) and
                      after (2024-12-04 17:00:00, weight 0.23) in time
15:42 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06237584471873 and -59.21755436108131 degrees.
15:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06237584471873 and -59.21755436108131 degrees.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:42 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:42 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:42 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:42 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:42 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:42 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.976934 (min) 0.337481 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.348507 (min) 0.421929 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.300171 (min) -0.224977 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -8.06171 (min) -5.61471 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.64354 (min) 6.63082 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.90171 (min) 71.3066 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.34151 (min) 9.69996 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.378 (min) 34.6632 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000431091 (min) 0.00185041 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:42 DEBUG   opendrift.models.basemodel:712: 2 elements hit coastline, moving back to water
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 19 elements to seafloor.
15:42 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:42 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2]
15:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0]
15:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  542.    0.]
 [   0.    0.    0.    0.    0.]
 [ 212.    0.    0.  800.    0.]
 [  13.    0. 1310.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:42 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:42 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06819545950608191
15:42 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:42 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:42 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 20 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 20 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 21 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 21 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 22 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 22 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 24 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 24 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 25 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 29 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 27 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
15:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
15:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [132, 0, 344, 24, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:42 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:42 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:42 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:42 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:42 INFO    opendrift.models.basemodel:2035: 2024-12-04 16:43:52.626553 - step 90 of 96 - 500 active elements (0 deactivated)
15:42 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:42 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:42 DEBUG   opendrift.models.basemodel:2054:               57.634524683242226 <- latitude  -> 57.77586616209359
15:42 DEBUG   opendrift.models.basemodel:2059:               9.926732358559706 <- longitude -> 10.788501780692663
15:42 DEBUG   opendrift.models.basemodel:2064:               -35.32150825556796   <- z ->   0.0
15:42 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 16:00:00 (before)
                2024-12-04 17:00:00 (after)
15:42 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 16:00:00) in space  (linearNDFast)
15:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:42 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 17:00:00) in space  (linearNDFast)
15:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:42 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 16:00:00, weight 0.27) and
                      after (2024-12-04 17:00:00, weight 0.73) in time
15:42 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.07327875167291 and -59.21150922876631 degrees.
15:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.07327875167291 and -59.21150922876631 degrees.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:42 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:42 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:42 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:42 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:42 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:42 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:42 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:42 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:42 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.986792 (min) 0.328757 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.3446 (min) 0.382362 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.299971 (min) -0.207812 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.96697 (min) -5.5764 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.8259 (min) 6.84371 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.86337 (min) 70.0114 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.32503 (min) 9.76939 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3339 (min) 34.6629 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000711009 (min) 0.00184654 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:42 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:42 DEBUG   opendrift.models.basemodel:712: 1 elements hit coastline, moving back to water
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 25 elements to seafloor.
15:42 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:42 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
15:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 2 2 2]
15:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0 0 0]
15:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  544.    0.]
 [   0.    0.    0.    0.    0.]
 [ 217.    0.    0.  814.    0.]
 [  13.    0. 1319.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:42 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:42 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0709927964569404
15:42 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:42 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:42 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:42 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 26 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 26 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 27 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 27 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 28 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 28 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 29 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 29 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 30 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 31 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 31 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:42 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
15:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
15:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [135, 0, 335, 30, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:42 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:42 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:42 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:42 DEBUG   opendrift.models.basemodel:754: Lifting 30 elements to seafloor.
15:42 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:42 INFO    opendrift.models.basemodel:2035: 2024-12-04 17:13:52.626553 - step 91 of 96 - 500 active elements (0 deactivated)
15:42 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:42 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:42 DEBUG   opendrift.models.basemodel:2054:               57.634524683242226 <- latitude  -> 57.77239709309488
15:42 DEBUG   opendrift.models.basemodel:2059:               9.910705809838532 <- longitude -> 10.798436946050696
15:42 DEBUG   opendrift.models.basemodel:2064:               -34.52880610572932   <- z ->   0.0
15:42 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:42 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:42 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:42 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 17:00:00 (before)
                2024-12-04 18:00:00 (after)
15:44 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:44 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:44 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:44 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:44 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:44 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:44 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 58x79x7) for time after (2024-12-04 18:00:00)
15:44 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 17:00:00) in space  (linearNDFast)
15:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:44 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 18:00:00) in space  (linearNDFast)
15:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:44 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 15 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
15:45 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 17:00:00, weight 0.77) and
                      after (2024-12-04 18:00:00, weight 0.23) in time
15:45 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08930530685331 and -59.20157405675149 degrees.
15:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08930530685331 and -59.20157405675149 degrees.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:45 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:45 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:45 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.963913 (min) 0.337768 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.327169 (min) 0.397865 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.309298 (min) -0.204489 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.85806 (min) -5.47219 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 4.98867 (min) 6.95096 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 71.0662 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.30693 (min) 9.73279 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3903 (min) 34.6755 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000508962 (min) 0.00173716 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:45 DEBUG   opendrift.models.basemodel:712: 3 elements hit coastline, moving back to water
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:45 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:45 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:45 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:45 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:45 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0 0]
15:45 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3 3]
15:45 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  546.    0.]
 [   0.    0.    0.    0.    0.]
 [ 221.    0.    0.  821.    0.]
 [  13.    0. 1322.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:45 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:45 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:45 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07292724012721984
15:45 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:45 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:45 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 32 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 32 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 33 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 33 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 29 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 34 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 34 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 35 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
15:45 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
15:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:45 INFO    opendrift.models.chemicaldrift:1861: partitioning: [137, 0, 328, 35, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:45 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:45 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:45 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 35 elements to seafloor.
15:45 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:45 INFO    opendrift.models.basemodel:2035: 2024-12-04 17:43:52.626553 - step 92 of 96 - 500 active elements (0 deactivated)
15:45 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:45 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:45 DEBUG   opendrift.models.basemodel:2054:               57.634524683242226 <- latitude  -> 57.768599252632406
15:45 DEBUG   opendrift.models.basemodel:2059:               9.896194955839805 <- longitude -> 10.805544772708076
15:45 DEBUG   opendrift.models.basemodel:2064:               -36.33776887831085   <- z ->   0.0
15:45 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 17:00:00 (before)
                2024-12-04 18:00:00 (after)
15:45 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 17:00:00) in space  (linearNDFast)
15:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:45 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 18:00:00) in space  (linearNDFast)
15:45 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:45 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 17:00:00, weight 0.27) and
                      after (2024-12-04 18:00:00, weight 0.73) in time
15:45 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.103816162908586 and -59.19446622698861 degrees.
15:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.103816162908586 and -59.19446622698861 degrees.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:45 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:45 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:45 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:45 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:45 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:45 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:45 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.978954 (min) 0.269974 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.324067 (min) 0.340075 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.325972 (min) -0.216566 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.70614 (min) -5.33502 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.16794 (min) 6.96881 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 71.9233 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.28695 (min) 9.7348 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3942 (min) 34.6757 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000716273 (min) 0.0017172 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:45 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:45 DEBUG   opendrift.models.basemodel:712: 3 elements hit coastline, moving back to water
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:45 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:45 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:45 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:45 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
15:45 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
15:45 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
15:45 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  547.    0.]
 [   0.    0.    0.    0.    0.]
 [ 223.    0.    0.  827.    0.]
 [  13.    0. 1325.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:45 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:45 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:45 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07350393332644749
15:45 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:45 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:45 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:45 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 36 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 36 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 37 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 37 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 38 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 38 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 40 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 40 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 40 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 40 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 40 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 41 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 41 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 42 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:45 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:45 DEBUG   opendrift.models.oceandrift:627: 43 elements reached seafloor, interacting with bottom
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 43 elements to seafloor.
15:45 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
15:45 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
15:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:45 INFO    opendrift.models.chemicaldrift:1861: partitioning: [138, 0, 323, 39, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:45 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:45 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:45 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:45 DEBUG   opendrift.models.basemodel:754: Lifting 40 elements to seafloor.
15:45 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:45 INFO    opendrift.models.basemodel:2035: 2024-12-04 18:13:52.626553 - step 93 of 96 - 500 active elements (0 deactivated)
15:45 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:45 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:45 DEBUG   opendrift.models.basemodel:2054:               57.634524683242226 <- latitude  -> 57.76466454302604
15:45 DEBUG   opendrift.models.basemodel:2059:               9.88273652877933 <- longitude -> 10.812576601293681
15:45 DEBUG   opendrift.models.basemodel:2064:               -35.75741270275272   <- z ->   0.0
15:45 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:45 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:45 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:45 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:45 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 18:00:00 (before)
                2024-12-04 19:00:00 (after)
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:47 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:47 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 59x81x7) for time after (2024-12-04 19:00:00)
15:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 18:00:00) in space  (linearNDFast)
15:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 19:00:00) in space  (linearNDFast)
15:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
15:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 18:00:00, weight 0.77) and
                      after (2024-12-04 19:00:00, weight 0.23) in time
15:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.11727457724547 and -59.187434408512736 degrees.
15:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.11727457724547 and -59.187434408512736 degrees.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.959025 (min) 0.302721 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.320046 (min) 0.38632 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.34903 (min) -0.236858 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.31792 (min) -4.99896 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.29187 (min) 7.03535 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 70.637 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.26698 (min) 9.70257 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3925 (min) 34.6771 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000588205 (min) 0.00175864 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:47 DEBUG   opendrift.models.basemodel:712: 2 elements hit coastline, moving back to water
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 42 elements to seafloor.
15:47 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:47 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
15:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 0 0 2 2]
15:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 3 3 0 0]
15:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  551.    0.]
 [   0.    0.    0.    0.    0.]
 [ 228.    0.    0.  834.    0.]
 [  13.    0. 1329.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:47 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:47 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07223034190529645
15:47 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:47 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:47 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 44 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 44 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 45 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 45 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 46 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 46 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 48 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 48 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 49 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 49 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 51 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 51 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 52 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
15:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
15:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [139, 0, 311, 50, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:47 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:47 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:47 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 52 elements to seafloor.
15:47 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:47 INFO    opendrift.models.basemodel:2035: 2024-12-04 18:43:52.626553 - step 94 of 96 - 500 active elements (0 deactivated)
15:47 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:47 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:47 DEBUG   opendrift.models.basemodel:2054:               57.634524683242226 <- latitude  -> 57.76492072803736
15:47 DEBUG   opendrift.models.basemodel:2059:               9.870019839155452 <- longitude -> 10.816769026765595
15:47 DEBUG   opendrift.models.basemodel:2064:               -39.14183386933505   <- z ->   0.0
15:47 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 18:00:00 (before)
                2024-12-04 19:00:00 (after)
15:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 18:00:00) in space  (linearNDFast)
15:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 19:00:00) in space  (linearNDFast)
15:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 18:00:00, weight 0.27) and
                      after (2024-12-04 19:00:00, weight 0.73) in time
15:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.129991282564376 and -59.18324198103784 degrees.
15:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.129991282564376 and -59.18324198103784 degrees.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.927935 (min) 0.254316 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.327489 (min) 0.539667 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.374944 (min) -0.268358 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.08896 (min) -4.59599 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.36851 (min) 7.20364 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 72.75 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.24703 (min) 9.87739 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.2851 (min) 34.6736 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000901964 (min) 0.00173473 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:47 DEBUG   opendrift.models.basemodel:712: 2 elements hit coastline, moving back to water
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:47 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:47 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0]
15:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3]
15:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  554.    0.]
 [   0.    0.    0.    0.    0.]
 [ 230.    0.    0.  848.    0.]
 [  13.    0. 1336.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:47 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:47 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.0702251337415104
15:47 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:47 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:47 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 54 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 12 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 28 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 10 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:47 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
15:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
15:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [138, 0, 307, 55, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:47 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:47 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:47 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:47 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:47 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:47 INFO    opendrift.models.basemodel:2035: 2024-12-04 19:13:52.626553 - step 95 of 96 - 500 active elements (0 deactivated)
15:47 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:47 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:47 DEBUG   opendrift.models.basemodel:2054:               57.63602266255484 <- latitude  -> 57.76735209460917
15:47 DEBUG   opendrift.models.basemodel:2059:               9.858075739901675 <- longitude -> 10.822755061654027
15:47 DEBUG   opendrift.models.basemodel:2064:               -40.57763561088161   <- z ->   0.0
15:47 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 19:00:00 (before)
                2024-12-04 20:00:00 (after)
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
15:49 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'sea_water_salinity']
15:49 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 62x84x7) for time after (2024-12-04 20:00:00)
15:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 19:00:00) in space  (linearNDFast)
15:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 20:00:00) in space  (linearNDFast)
15:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift:136: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
15:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 19:00:00, weight 0.77) and
                      after (2024-12-04 20:00:00, weight 0.23) in time
15:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.141935386786486 and -59.17725593532005 degrees.
15:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.141935386786486 and -59.17725593532005 degrees.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.917475 (min) 0.251025 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.302804 (min) 0.502554 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.402172 (min) -0.30242 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.97198 (min) -4.32873 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.50079 (min) 7.22944 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 74.5221 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.24628 (min) 9.82863 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3943 (min) 34.6783 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000735132 (min) 0.00222904 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:49 DEBUG   opendrift.models.basemodel:712: 1 elements hit coastline, moving back to water
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:49 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:49 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
15:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0 0]
15:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3 3]
15:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  558.    0.]
 [   0.    0.    0.    0.    0.]
 [ 232.    0.    0.  861.    0.]
 [  13.    0. 1347.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:49 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:49 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.06990353023065968
15:49 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:49 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:49 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 25 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 63 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 63 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 65 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 65 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 26 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 66 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 66 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 68 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 68 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 23 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 69 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 69 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 70 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 70 elements to seafloor.
15:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
15:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
15:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 313, 51, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:49 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:49 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:49 DEBUG   opendrift.models.basemodel:890: to be seeded: 0, already seeded 500
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 54 elements to seafloor.
15:49 DEBUG   opendrift.models.basemodel:2034: ======================================================================
15:49 INFO    opendrift.models.basemodel:2035: 2024-12-04 19:43:52.626553 - step 96 of 96 - 500 active elements (0 deactivated)
15:49 DEBUG   opendrift.models.basemodel:2041: 0 elements scheduled.
15:49 DEBUG   opendrift.models.basemodel:2043: ======================================================================
15:49 DEBUG   opendrift.models.basemodel:2054:               57.63773187627345 <- latitude  -> 57.769399725739554
15:49 DEBUG   opendrift.models.basemodel:2059:               9.846447787033954 <- longitude -> 10.826603015378923
15:49 DEBUG   opendrift.models.basemodel:2064:               -41.92984362880234   <- z ->   0.0
15:49 DEBUG   opendrift.models.basemodel:2065: ---------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-12-04 19:00:00 (before)
                2024-12-04 20:00:00 (after)
15:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-12-04 19:00:00) in space  (linearNDFast)
15:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-12-04 20:00:00) in space  (linearNDFast)
15:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
15:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-12-04 19:00:00, weight 0.27) and
                      after (2024-12-04 20:00:00, weight 0.73) in time
15:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
15:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.153563339391916 and -59.173407985420006 degrees.
15:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.153563339391916 and -59.173407985420006 degrees.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
15:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
15:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
15:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
15:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.904218 (min) 0.214405 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.30189 (min) 0.614358 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: -0.435688 (min) -0.339268 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.91863 (min) -4.20998 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 5.6553 (min) 7.3924 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.1602 (min) 74.6499 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 8.22261 (min) 9.86761 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 31.3387 (min) 34.6777 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000922366 (min) 0.00195828 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:49 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:49 DEBUG   opendrift.models.basemodel:2108: Calling ChemicalDrift.update()
15:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
15:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
15:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
15:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2]
15:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0]
15:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  560.    0.]
 [   0.    0.    0.    0.    0.]
 [ 235.    0.    0.  872.    0.]
 [  13.    0. 1366.    0.    0.]
 [   0.    0.    0.    0.    0.]]
15:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
15:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
15:49 DEBUG   opendrift.models.oceandrift:521: Using functional expression for diffusivity
15:49 DEBUG   opendrift.models.oceandrift:526: Diffusivities are in range 0.0 to 0.07253651025522068
15:49 DEBUG   opendrift.models.oceandrift:545: TSprofiles deactivated for vertical mixing
15:49 DEBUG   opendrift.models.oceandrift:559: Vertical mixing module:windspeed_Large1994
15:49 DEBUG   opendrift.models.oceandrift:562: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
15:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 53 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 53 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 55 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 55 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 56 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 56 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 57 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 57 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 58 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 58 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 15 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 16 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 59 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 59 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 21 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 14 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 60 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 60 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 20 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 11 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 24 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 18 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 19 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 13 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 61 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 61 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 17 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 62 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 62 elements to seafloor.
15:49 DEBUG   opendrift.models.oceandrift:609: 22 elements penetrated seafloor, lifting up
15:49 DEBUG   opendrift.models.oceandrift:627: 64 elements reached seafloor, interacting with bottom
15:49 DEBUG   opendrift.models.basemodel:754: Lifting 64 elements to seafloor.
15:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 31
15:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
15:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 31 elements
15:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
15:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [137, 0, 330, 33, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
15:49 DEBUG   opendrift.models.basemodel:1660: Horizontal diffusivity is 0, no random walk.
15:49 DEBUG   opendrift.models.basemodel:2123: 500 active elements (0 deactivated)
15:49 DEBUG   opendrift.models.basemodel:2152: Cleaning up
15:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
15:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
15:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
15:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
15:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
15:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
15:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
15:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
15:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
15:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
15:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
15:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
15:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
15:49 DEBUG   opendrift.models.basemodel:710: No elements hit coastline.
15:49 DEBUG   opendrift.models.basemodel:1709: No elements to deactivate
15:49 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Run to Mode.Result

Print and plot results

print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int32(item)) for item in o.ntransformations[isp,:]]) )

mass = o.get_property('mass')
mass_d = o.get_property('mass_degraded')
mass_v = o.get_property('mass_volatilized')

m_pre = sum(mass[0][-1])
m_deg = sum(mass_d[0][-1])
m_vol = sum(mass_v[0][-1])
m_tot = m_pre + m_deg + m_vol

print('Mass budget for target chemical:')
print('mass preserved       : {:.3f}'.format(m_pre * 1e-6),' g   {:.3f}'.format(m_pre/m_tot*100),'%')
print('mass degraded        : {:.3f}'.format(m_deg * 1e-6),' g   {:.3f}'.format(m_deg/m_tot*100),'%')
print('mass volatilized     : {:.3f}'.format(m_vol * 1e-6),' g   {:.3f}'.format(m_vol/m_tot*100),'%')

legend=['dissolved', '', 'SPM', 'sediment', '']

o.animation_profile(color='specie',
            markersize='mass',
            markersize_scaling=30,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            legend = legend,
            legend_loc = 3,
            fps = 10
            )

Final speciation:
LMM                             :    137
Humic colloid                   :      0
Particle reversible             :    330
Sediment reversible             :     33
Sediment slowly reversible      :      0
Number of transformations:
['        0', '        0', '        0', '      560', '        0']
['        0', '        0', '        0', '        0', '        0']
['      235', '        0', '        0', '      883', '        0']
['       13', '        0', '     1397', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
Mass budget for target chemical:
mass preserved       : 0.505  g   50.514 %
mass degraded        : 0.492  g   49.179 %
mass volatilized     : 0.003  g   0.307 %
20:15:50 DEBUG   opendrift.models.basemodel:3044: Saving animation..
20:15:50 INFO    opendrift.models.basemodel:4613: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_0.gif...
20:16:01 DEBUG   opendrift.models.basemodel:4651: MPLBACKEND = agg
20:16:01 DEBUG   opendrift.models.basemodel:4652: DISPLAY = None
20:16:01 DEBUG   opendrift.models.basemodel:4653: Time to save animation: 0:00:11.803980
20:16:01 INFO    opendrift.models.basemodel:3251: Time to make animation: 0:00:11.999614

o.animation(color='specie',
            markersize='mass',
            markersize_scaling=100,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            fast = True,
            legend = legend,
            legend_loc = 3,
            fps=10
            )

16:01 DEBUG   opendrift.models.basemodel:2364: Setting up map: corners=None, fast=True, lscale=None
16:01 WARNING opendrift.models.basemodel:2410: Plotting fast. This will make your plots less accurate.
16:04 DEBUG   opendrift.models.basemodel:3044: Saving animation..
16:04 INFO    opendrift.models.basemodel:4613: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_1.gif...
17:11 DEBUG   opendrift.models.basemodel:4651: MPLBACKEND = agg
17:11 DEBUG   opendrift.models.basemodel:4652: DISPLAY = None
17:11 DEBUG   opendrift.models.basemodel:4653: Time to save animation: 0:01:07.522426
17:11 INFO    opendrift.models.basemodel:3037: Time to make animation: 0:01:10.030491

o.plot_mass(legend = legend,
            time_unit = 'hours',
            title = 'Chemical mass budget')

dissolved : 0.111370375g (22.047366409581578%)
SPM : 0.36005824999999997g (71.27870554932336%)
sediment : 0.033712773437499996g (6.673928041095053%)
/root/project/opendrift/models/chemicaldrift.py:3006: UserWarning: set_ticklabels() should only be used with a fixed number of ticks, i.e. after set_ticks() or using a FixedLocator.
  ax.axes.get_xaxis().set_ticklabels(np.round(ax.axes.get_xticks() * time_conversion_factor))

Total running time of the script: (3 minutes 28.602 seconds)

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