ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic, reader_ROMS_native
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

13:58:51 DEBUG   opendrift.models.basemodel:625: Adding 18 config items from basemodel
13:58:51 DEBUG   opendrift.models.basemodel:625: Adding 13 config items from basemodel
13:58:51 DEBUG   opendrift.models.basemodel:625: Adding 32 config items from basemodel
13:58:51 INFO    opendrift.models.basemodel:539: OpenDriftSimulation initialised (version 1.10.7 / v1.10.6-119-g1da5bec)
13:58:51 DEBUG   opendrift.models.basemodel:625: Adding 15 config items from oceandrift
13:58:51 DEBUG   opendrift.models.basemodel:637:   Overwriting config item seed:z
13:58:51 DEBUG   opendrift.models.basemodel:625: Adding 71 config items from chemicaldrift
13:58:51 INFO    opendrift.readers.reader_netCDF_CF_generic:92: Opening dataset: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:58:56 DEBUG   opendrift.readers.reader_netCDF_CF_generic:109: Finding coordinate variables.
13:58:56 DEBUG   opendrift.readers.reader_netCDF_CF_generic:122: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
/opt/conda/envs/opendrift/lib/python3.11/site-packages/pyproj/crs/crs.py:1286: UserWarning: You will likely lose important projection information when converting to a PROJ string from another format. See: https://proj.org/faq.html#what-is-the-best-format-for-describing-coordinate-reference-systems
  proj = self._crs.to_proj4(version=version)
13:58:56 DEBUG   opendrift.readers.reader_netCDF_CF_generic:310: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
13:58:56 DEBUG   opendrift.readers.basereader.variables:593: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
13:58:56 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
13:58:56 DEBUG   opendrift.readers.basereader.variables:548: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
13:58:56 DEBUG   opendrift.readers.basereader.variables:548: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
13:58:56 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
13:58:56 DEBUG   opendrift.readers.basereader.variables:593: Setting buffer size 7 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 1 m/s and time span of 1:00:00
13:58:56 DEBUG   opendrift.models.basemodel:952: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
13:58:56 DEBUG   opendrift.models.basemodel:952: Added reader constant_reader
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: 0, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: 0, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

58:56 DEBUG   opendrift.models.chemicaldrift:870: Partitioning coefficients (Tref,freshwater)
58:56 DEBUG   opendrift.models.chemicaldrift:871: KOC_sed: 12953.922406542462 L/KgOC
58:56 DEBUG   opendrift.models.chemicaldrift:872: KOC_SPM: 12953.922406542462 L/KgOC
58:56 DEBUG   opendrift.models.chemicaldrift:873: KOC_DOM: 3004.29439651874 L/KgOC
58:56 DEBUG   opendrift.models.chemicaldrift:885: Kd_sed: 647.6961203271231 L/Kg
58:56 DEBUG   opendrift.models.chemicaldrift:886: Kd_SPM: 647.6961203271231 L/Kg
58:56 DEBUG   opendrift.models.chemicaldrift:887: Kd_DOM: 1580.2588525688573 L/Kg
58:56 DEBUG   opendrift.models.chemicaldrift:1104: nspecies: 5
58:56 DEBUG   opendrift.models.chemicaldrift:1105: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
58:56 DEBUG   opendrift.models.chemicaldrift:509: Initial partitioning:
58:56 DEBUG   opendrift.models.chemicaldrift:511:       449   0 LMM
58:56 DEBUG   opendrift.models.chemicaldrift:511:         0   1 Humic colloid
58:56 DEBUG   opendrift.models.chemicaldrift:511:        51   2 Particle reversible
58:56 DEBUG   opendrift.models.chemicaldrift:511:         0   3 Sediment reversible
58:56 DEBUG   opendrift.models.chemicaldrift:511:         0   4 Sediment slowly reversible

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

58:56 DEBUG   opendrift.models.basemodel:2545:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.10.7
  Platform: Linux, 5.15.0-1039-aws
56807327270508 GB memory
processors (x86_64)
  NumPy version 1.25.2
  SciPy version 1.11.2
  Matplotlib version 3.7.2
  NetCDF4 version 1.6.1
  Xarray version 2023.8.0
  Python version 3.11.4 | packaged by conda-forge | (main, Jun 10 2023, 18:08:17) [GCC 12.2.0]
------------------------------------------------------

58:56 DEBUG   opendrift.models.basemodel:2562: No output file is specified, neglecting export_buffer_length
58:56 INFO    opendrift.models.basemodel:2591: Fallback values will be used for the following variables which have no readers:
58:56 INFO    opendrift.models.basemodel:2594:       ocean_vertical_diffusivity: 0.000100
58:56 INFO    opendrift.models.basemodel:2594:       spm: 1.000000
58:56 INFO    opendrift.models.basemodel:2594:       active_sediment_layer_thickness: 0.030000
58:56 INFO    opendrift.models.basemodel:2594:       doc: 0.000000
58:56 INFO    opendrift.models.basemodel:2594:       sea_water_ph_reported_on_total_scale: 8.100000
58:56 INFO    opendrift.models.basemodel:2594:       pH_sediment: 6.900000
58:56 DEBUG   opendrift.models.basemodel:2718: Preparing readers for simulation coverage ([7.601756713767218, 55.98946593001082, 13.6114371796654, 59.20488526627824]) and time (2023-08-22 13:58:56.855288 to 2023-08-24 13:58:56.855288)
58:56 DEBUG   opendrift.models.basemodel:2722:       Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:56 DEBUG   opendrift.readers.basereader.structured:119: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
58:56 DEBUG   opendrift.readers.basereader:188: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:56 DEBUG   opendrift.models.basemodel:2722:       Preparing constant_reader
58:56 DEBUG   opendrift.readers.basereader:188: Nothing more to prepare for constant_reader
58:56 INFO    opendrift.models.basemodel:2753: Adding a dynamical landmask with max. priority based on assumed maximum speed of 1 m/s. Adding a customised landmask may be faster...
58:56 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
59:02 DEBUG   opendrift.models.basemodel:952: Added reader global_landmask
59:02 INFO    opendrift.models.basemodel:1701: Using existing reader for land_binary_mask
59:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:02 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:02 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:02 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:02 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:02 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:02 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:02 DEBUG   opendrift.models.basemodel:1527:               0 active elements
59:02 INFO    opendrift.models.basemodel:1713: All points are in ocean
59:02 INFO    opendrift.models.chemicaldrift:353: Number of species: 5
59:02 INFO    opendrift.models.chemicaldrift:355:   0 LMM
59:02 INFO    opendrift.models.chemicaldrift:355:   1 Humic colloid
59:02 INFO    opendrift.models.chemicaldrift:355:   2 Particle reversible
59:02 INFO    opendrift.models.chemicaldrift:355:   3 Sediment reversible
59:02 INFO    opendrift.models.chemicaldrift:355:   4 Sediment slowly reversible
59:02 INFO    opendrift.models.chemicaldrift:358: transfer setup: organics
59:02 INFO    opendrift.models.chemicaldrift:360: nspecies: 5
59:02 INFO    opendrift.models.chemicaldrift:361: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
59:02 DEBUG   opendrift.models.basemodel:1658: to be seeded: 500, already seeded 0
59:02 DEBUG   opendrift.models.basemodel:1676: Released 500 new elements.
59:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level']
59:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:02 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 13:00:00 (before)
                2023-08-22 14:00:00 (after)
59:02 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:02 DEBUG   opendrift.readers.basereader.structured:253: Fetched env-block (size 28x27x2) for time before (2023-08-22 13:00:00)
59:02 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 13:00:00) in space  (linearNDFast)
59:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:02 DEBUG   opendrift.readers.basereader.structured:350: No time interpolation needed - right on time.
59:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:02 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:02 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:02 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
59:02 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:02 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:02 DEBUG   opendrift.models.basemodel:1538:               57.546223 <- latitude  -> 57.64813
59:02 DEBUG   opendrift.models.basemodel:1543:               10.507113 <- longitude -> 10.70608
59:02 DEBUG   opendrift.models.basemodel:1548:               -9.98847   <- z ->   -0.046954762
59:02 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:02 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:02 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:02 INFO    opendrift.models.basemodel:2882: 2023-08-22 13:58:56.855288 - step 1 of 96 - 500 active elements (0 deactivated)
59:02 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:02 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:02 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 13:00:00 (before)
                2023-08-22 14:00:00 (after)
59:04 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:04 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:04 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:04 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:04 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:04 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:04 DEBUG   opendrift.readers.basereader.structured:253: Fetched env-block (size 28x27x6) for time before (2023-08-22 13:00:00)
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:05 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 28x27x6) for time after (2023-08-22 14:00:00)
59:05 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 13:00:00) in space  (linearNDFast)
59:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:05 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 14:00:00) in space  (linearNDFast)
59:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:05 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 13:00:00, weight 0.02) and
                      after (2023-08-22 14:00:00, weight 0.98) in time
59:05 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
59:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
59:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:05 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:05 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:05 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:05 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:05 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0535502 (min) 0.141855 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0695174 (min) 0.301077 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     x_wind: -2.59468 (min) 4.88507 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.69981 (min) 1.45484 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.7286 (min) 17.8387 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8735 (min) 32.0303 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -6.52757e-05 (min) 4.05635e-05 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:05 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:05 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:05 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:05 DEBUG   opendrift.models.basemodel:1538:               57.546223 <- latitude  -> 57.64813
59:05 DEBUG   opendrift.models.basemodel:1543:               10.507113 <- longitude -> 10.70608
59:05 DEBUG   opendrift.models.basemodel:1548:               -9.98847   <- z ->   -0.046954762
59:05 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:05 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:05 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:05 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:05 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
59:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
59:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
59:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
59:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
59:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:05 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:05 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.018698277062758457
59:05 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:05 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:05 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:05 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:06 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:06 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:06 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:06 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:06 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [450, 0, 50, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:06 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:06 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:06 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:06 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:06 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:06 INFO    opendrift.models.basemodel:2882: 2023-08-22 14:28:56.855288 - step 2 of 96 - 500 active elements (0 deactivated)
59:06 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:06 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:06 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:06 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:06 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:06 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:06 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:06 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:06 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:06 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 14:00:00 (before)
                2023-08-22 15:00:00 (after)
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:07 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 29x26x6) for time after (2023-08-22 15:00:00)
59:07 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 14:00:00) in space  (linearNDFast)
59:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:07 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 15:00:00) in space  (linearNDFast)
59:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:07 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 14:00:00, weight 0.52) and
                      after (2023-08-22 15:00:00, weight 0.48) in time
59:07 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.49274093757244 and -59.29364854997221 degrees.
59:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.49274093757244 and -59.29364854997221 degrees.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:07 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:07 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0574896 (min) 0.128609 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0609197 (min) 0.305099 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     x_wind: -2.23789 (min) 5.13257 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.44676 (min) 1.45057 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.46428 (min) 23.6904 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5748 (min) 17.8471 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8752 (min) 32.5429 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -6.04426e-05 (min) 6.07548e-05 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:07 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:07 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:07 DEBUG   opendrift.models.basemodel:1538:               57.549435362084196 <- latitude  -> 57.65173794580869
59:07 DEBUG   opendrift.models.basemodel:1543:               10.507270143928865 <- longitude -> 10.706362511651855
59:07 DEBUG   opendrift.models.basemodel:1548:               -18.37889159601236   <- z ->   -0.0024274102690060584
59:07 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:07 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:07 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:07 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:07 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
59:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 0]
59:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 3]
59:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 7. 0.]
 [0. 0. 0. 0. 0.]
 [2. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
59:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:07 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:07 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.019889956570314712
59:07 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:07 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:07 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:07 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [444, 0, 47, 9, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:07 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:07 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:07 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:07 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:07 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:07 INFO    opendrift.models.basemodel:2882: 2023-08-22 14:58:56.855288 - step 3 of 96 - 500 active elements (0 deactivated)
59:07 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:07 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:07 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 14:00:00 (before)
                2023-08-22 15:00:00 (after)
59:07 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 14:00:00) in space  (linearNDFast)
59:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:07 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 15:00:00) in space  (linearNDFast)
59:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:07 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 14:00:00, weight 0.02) and
                      after (2023-08-22 15:00:00, weight 0.98) in time
59:07 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.492313282993884 and -59.29304888054129 degrees.
59:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.492313282993884 and -59.29304888054129 degrees.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:07 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:07 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:07 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:07 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0584682 (min) 0.133079 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0615484 (min) 0.307191 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     x_wind: -1.86643 (min) 5.43697 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.23144 (min) 1.40929 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.40876 (min) 23.4838 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.576 (min) 17.8339 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8762 (min) 32.5432 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.31911e-05 (min) 7.31968e-05 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:07 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:07 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:07 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:07 DEBUG   opendrift.models.basemodel:1538:               57.55104649967625 <- latitude  -> 57.654850638175496
59:07 DEBUG   opendrift.models.basemodel:1543:               10.507697804021335 <- longitude -> 10.706962183822059
59:07 DEBUG   opendrift.models.basemodel:1548:               -19.113775638543835   <- z ->   -0.009411672735872623
59:07 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:07 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:07 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:07 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
59:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 27.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0.  2.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
59:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:07 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:07 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.021865011095154447
59:07 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:07 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:07 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:07 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:07 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [425, 0, 43, 32, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:07 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:07 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:07 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:07 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:07 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:07 INFO    opendrift.models.basemodel:2882: 2023-08-22 15:28:56.855288 - step 4 of 96 - 500 active elements (0 deactivated)
59:07 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:07 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:07 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 15:00:00 (before)
                2023-08-22 16:00:00 (after)
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:09 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:09 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 30x26x6) for time after (2023-08-22 16:00:00)
59:09 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 15:00:00) in space  (linearNDFast)
59:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:09 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 16:00:00) in space  (linearNDFast)
59:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:09 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 15:00:00, weight 0.52) and
                      after (2023-08-22 16:00:00, weight 0.48) in time
59:09 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.49198721615706 and -59.29225933238597 degrees.
59:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.49198721615706 and -59.29225933238597 degrees.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:09 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:09 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0612429 (min) 0.174227 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0483742 (min) 0.300331 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     x_wind: -1.30838 (min) 5.12669 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.15407 (min) 0.944831 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.33794 (min) 23.3735 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5775 (min) 17.867 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8837 (min) 32.5441 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -4.86215e-05 (min) 7.9659e-05 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:09 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:09 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:09 DEBUG   opendrift.models.basemodel:1538:               57.55374621366413 <- latitude  -> 57.6574523497386
59:09 DEBUG   opendrift.models.basemodel:1543:               10.50802386469571 <- longitude -> 10.707751726183968
59:09 DEBUG   opendrift.models.basemodel:1548:               -19.689117878690226   <- z ->   0.0
59:09 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:09 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:09 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:09 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
59:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 42.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0.  5.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
59:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:09 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:09 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0194983635014156
59:09 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:09 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:09 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:09 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [410, 0, 43, 47, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:09 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:09 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:09 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:09 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:09 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:09 INFO    opendrift.models.basemodel:2882: 2023-08-22 15:58:56.855288 - step 5 of 96 - 500 active elements (0 deactivated)
59:09 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:09 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:09 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 15:00:00 (before)
                2023-08-22 16:00:00 (after)
59:09 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 15:00:00) in space  (linearNDFast)
59:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:09 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 16:00:00) in space  (linearNDFast)
59:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:09 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 15:00:00, weight 0.02) and
                      after (2023-08-22 16:00:00, weight 0.98) in time
59:09 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.490933311786115 and -59.291653888296835 degrees.
59:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.490933311786115 and -59.291653888296835 degrees.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:09 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:09 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:09 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:09 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0639785 (min) 0.178633 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0425953 (min) 0.290735 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     x_wind: -0.7706 (min) 4.80687 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.08542 (min) 0.81035 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.31425 (min) 23.3066 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5802 (min) 17.9134 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8884 (min) 32.5414 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -4.41368e-05 (min) 8.60538e-05 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:09 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:09 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:09 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:09 DEBUG   opendrift.models.basemodel:1538:               57.55703146097908 <- latitude  -> 57.6606178596815
59:09 DEBUG   opendrift.models.basemodel:1543:               10.509077773908222 <- longitude -> 10.708357167459402
59:09 DEBUG   opendrift.models.basemodel:1548:               -20.14186739931103   <- z ->   0.0
59:09 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:09 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:09 DEBUG   opendrift.models.basemodel:836: Lifting 10 elements to seafloor.
59:09 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:09 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
59:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 63.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0.  5.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
59:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:09 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:09 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.016911117025491848
59:09 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:09 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:09 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:09 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [389, 0, 42, 69, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:09 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:09 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:09 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:09 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:09 INFO    opendrift.models.basemodel:2882: 2023-08-22 16:28:56.855288 - step 6 of 96 - 500 active elements (0 deactivated)
59:09 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:09 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:09 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 16:00:00 (before)
                2023-08-22 17:00:00 (after)
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:11 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:11 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 30x26x6) for time after (2023-08-22 17:00:00)
59:11 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 16:00:00) in space  (linearNDFast)
59:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:11 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 17:00:00) in space  (linearNDFast)
59:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:11 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 16:00:00, weight 0.52) and
                      after (2023-08-22 17:00:00, weight 0.48) in time
59:11 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.490288244929026 and -59.29109723287924 degrees.
59:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.490288244929026 and -59.29109723287924 degrees.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:11 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:11 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0649249 (min) 0.167231 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0364784 (min) 0.27239 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     x_wind: -0.0496133 (min) 4.60873 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.789177 (min) 0.884081 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.26562 (min) 23.2406 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5825 (min) 17.9012 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.8915 (min) 32.5389 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -3.8782e-05 (min) 9.0388e-05 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:11 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:11 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:11 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.6635700524048
59:11 DEBUG   opendrift.models.basemodel:1543:               10.50972284553309 <- longitude -> 10.70891381522597
59:11 DEBUG   opendrift.models.basemodel:1548:               -20.52760540537983   <- z ->   0.0
59:11 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:11 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:11 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:11 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:11 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
59:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0]
59:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 0 3]
59:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 81.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 6.  0.  0.  6.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
59:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:11 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:11 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.01577668565425851
59:11 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:11 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:11 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:11 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:11 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:11 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:11 INFO    opendrift.models.chemicaldrift:1861: partitioning: [374, 0, 38, 88, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:11 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:11 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:11 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:11 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:11 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:11 INFO    opendrift.models.basemodel:2882: 2023-08-22 16:58:56.855288 - step 7 of 96 - 500 active elements (0 deactivated)
59:11 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:11 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:11 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 16:00:00 (before)
                2023-08-22 17:00:00 (after)
59:11 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 16:00:00) in space  (linearNDFast)
59:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:11 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 17:00:00) in space  (linearNDFast)
59:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:11 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 16:00:00, weight 0.02) and
                      after (2023-08-22 17:00:00, weight 0.98) in time
59:11 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48950363781648 and -59.2906380295232 degrees.
59:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48950363781648 and -59.2906380295232 degrees.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:11 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:11 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:11 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:11 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0658062 (min) 0.163099 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0303492 (min) 0.249324 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     x_wind: 0.673613 (min) 4.64019 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.553464 (min) 0.962993 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.22768 (min) 23.1782 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5848 (min) 17.8713 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9061 (min) 32.5367 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -3.14766e-05 (min) 9.46473e-05 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:11 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:11 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:11 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:11 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.66551149980848
59:11 DEBUG   opendrift.models.basemodel:1543:               10.51050744365183 <- longitude -> 10.709373030548319
59:11 DEBUG   opendrift.models.basemodel:1548:               -21.051525115966797   <- z ->   -0.2226390823352929
59:11 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:11 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:11 DEBUG   opendrift.models.basemodel:836: Lifting 13 elements to seafloor.
59:11 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:11 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 23
59:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 104.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   7.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:11 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:11 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.01596466134235801
59:11 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:11 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:11 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:11 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:11 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:11 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:11 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:11 INFO    opendrift.models.chemicaldrift:1861: partitioning: [351, 0, 38, 111, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:11 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:11 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:11 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:11 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:11 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:11 INFO    opendrift.models.basemodel:2882: 2023-08-22 17:28:56.855288 - step 8 of 96 - 500 active elements (0 deactivated)
59:11 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:11 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:11 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 17:00:00 (before)
                2023-08-22 18:00:00 (after)
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:12 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:12 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 30x27x6) for time after (2023-08-22 18:00:00)
59:12 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 17:00:00) in space  (linearNDFast)
59:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:12 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 18:00:00) in space  (linearNDFast)
59:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:12 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 17:00:00, weight 0.52) and
                      after (2023-08-22 18:00:00, weight 0.48) in time
59:12 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:12 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48805890594059 and -59.2902850194928 degrees.
59:12 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48805890594059 and -59.2902850194928 degrees.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:12 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:12 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:12 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:12 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:12 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:12 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:12 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0653329 (min) 0.152949 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0264176 (min) 0.227047 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.0313 (min) 4.52949 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.018971 (min) 1.06268 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.23645 (min) 23.119 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.584 (min) 17.8351 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9196 (min) 32.5356 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.72515e-05 (min) 9.59148e-05 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:12 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:12 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:12 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.667929633842675
59:12 DEBUG   opendrift.models.basemodel:1543:               10.511952173941493 <- longitude -> 10.709726032536928
59:12 DEBUG   opendrift.models.basemodel:1548:               -21.051525115966797   <- z ->   -0.03363456222312944
59:12 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:12 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:12 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:12 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:12 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
59:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0]
59:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3]
59:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 115.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   7.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:12 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:12 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.015360414686256861
59:12 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:12 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:12 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:12 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [340, 0, 38, 122, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:12 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:12 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:12 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:12 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:12 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:12 INFO    opendrift.models.basemodel:2882: 2023-08-22 17:58:56.855288 - step 9 of 96 - 500 active elements (0 deactivated)
59:12 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:12 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:12 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 17:00:00 (before)
                2023-08-22 18:00:00 (after)
59:12 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 17:00:00) in space  (linearNDFast)
59:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:12 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 18:00:00) in space  (linearNDFast)
59:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:12 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 17:00:00, weight 0.02) and
                      after (2023-08-22 18:00:00, weight 0.98) in time
59:12 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:12 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48699934471025 and -59.290067873031155 degrees.
59:12 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48699934471025 and -59.290067873031155 degrees.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:12 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:12 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:12 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:12 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:12 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:12 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:12 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:12 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:12 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:12 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:12 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0648104 (min) 0.156629 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0214746 (min) 0.204355 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.32271 (min) 4.41815 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.586909 (min) 1.20151 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.23011 (min) 23.0598 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5845 (min) 17.8302 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9942 (min) 32.5334 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.14306e-05 (min) 9.70735e-05 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:12 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:12 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:12 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:12 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.669722756529076
59:12 DEBUG   opendrift.models.basemodel:1543:               10.51301173564059 <- longitude -> 10.709943187924477
59:12 DEBUG   opendrift.models.basemodel:1548:               -22.315351483717087   <- z ->   -0.08529223677289788
59:12 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:12 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:12 DEBUG   opendrift.models.basemodel:836: Lifting 5 elements to seafloor.
59:12 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:12 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
59:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0]
59:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3]
59:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 128.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   7.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:12 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:12 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.014859808145471035
59:12 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:12 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:12 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:12 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:12 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:12 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:12 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:12 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:12 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [327, 0, 36, 137, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:12 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:12 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:12 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:12 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:12 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:12 INFO    opendrift.models.basemodel:2882: 2023-08-22 18:28:56.855288 - step 10 of 96 - 500 active elements (0 deactivated)
59:12 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:12 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:12 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:12 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:12 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:12 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:12 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:12 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 18:00:00 (before)
                2023-08-22 19:00:00 (after)
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:14 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:14 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 31x26x6) for time after (2023-08-22 19:00:00)
59:14 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 18:00:00) in space  (linearNDFast)
59:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:14 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 19:00:00) in space  (linearNDFast)
59:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:14 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 18:00:00, weight 0.52) and
                      after (2023-08-22 19:00:00, weight 0.48) in time
59:14 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:14 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.28637748399511 degrees.
59:14 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.28637748399511 degrees.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:14 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:14 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:14 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:14 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:14 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:14 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:14 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0631617 (min) 0.170226 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0219034 (min) 0.188986 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.65703 (min) 4.38608 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.874332 (min) 1.32186 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.23685 (min) 23.0598 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5845 (min) 17.8308 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9256 (min) 32.5318 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -1.99175e-05 (min) 9.36049e-05 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:14 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:14 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:14 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.67155947472733
59:14 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.713633569512895
59:14 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   -0.015839128153509185
59:14 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:14 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:14 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:14 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:14 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
59:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 147.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   9.   0.]
 [  0.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:14 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:14 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.014951979569050361
59:14 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:14 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:14 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [308, 0, 36, 156, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:14 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:14 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:14 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:14 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:14 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:14 INFO    opendrift.models.basemodel:2882: 2023-08-22 18:58:56.855288 - step 11 of 96 - 500 active elements (0 deactivated)
59:14 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:14 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:14 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 18:00:00 (before)
                2023-08-22 19:00:00 (after)
59:14 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 18:00:00) in space  (linearNDFast)
59:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:14 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 19:00:00) in space  (linearNDFast)
59:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:14 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 18:00:00, weight 0.02) and
                      after (2023-08-22 19:00:00, weight 0.98) in time
59:14 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:14 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.28195851226546 degrees.
59:14 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.28195851226546 degrees.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:14 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:14 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:14 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:14 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:14 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:14 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:14 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:14 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:14 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:14 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:14 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0614721 (min) 0.164819 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0221242 (min) 0.172486 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.96125 (min) 4.49182 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.12573 (min) 1.46712 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.25702 (min) 23.0598 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5845 (min) 17.8119 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9604 (min) 32.5302 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -1.81711e-05 (min) 8.99681e-05 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:14 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:14 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:14 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:14 DEBUG   opendrift.models.basemodel:1538:               57.55762996506784 <- latitude  -> 57.67386452698419
59:14 DEBUG   opendrift.models.basemodel:1543:               10.513569422184892 <- longitude -> 10.718052529865892
59:14 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   -0.12746520170207076
59:14 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:14 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:14 DEBUG   opendrift.models.basemodel:836: Lifting 8 elements to seafloor.
59:14 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:14 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
59:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0]
59:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3]
59:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 163.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   9.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:14 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:14 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.015898678853763323
59:14 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:14 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:14 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:14 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [293, 0, 36, 171, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:14 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:14 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:14 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:14 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:14 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:14 INFO    opendrift.models.basemodel:2882: 2023-08-22 19:28:56.855288 - step 12 of 96 - 500 active elements (0 deactivated)
59:14 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:14 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:14 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:14 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:14 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:14 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:14 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:14 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 19:00:00 (before)
                2023-08-22 20:00:00 (after)
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:16 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:16 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 32x26x6) for time after (2023-08-22 20:00:00)
59:16 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 19:00:00) in space  (linearNDFast)
59:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:16 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 20:00:00) in space  (linearNDFast)
59:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:16 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 19:00:00, weight 0.52) and
                      after (2023-08-22 20:00:00, weight 0.48) in time
59:16 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:16 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.27748924657563 degrees.
59:16 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.27748924657563 degrees.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:16 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:16 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:16 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:16 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:16 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:16 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:16 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0591518 (min) 0.149572 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0303634 (min) 0.166399 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.82706 (min) 4.66098 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.30303 (min) 1.7515 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.31897 (min) 23.0598 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5876 (min) 17.7838 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9875 (min) 32.5287 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -1.01569e-05 (min) 8.3099e-05 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:16 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:16 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:16 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.676195404418635
59:16 DEBUG   opendrift.models.basemodel:1543:               10.513569422184895 <- longitude -> 10.722521793650463
59:16 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   0.0
59:16 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:16 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:16 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:16 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:16 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
59:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0]
59:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3]
59:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 175.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.   9.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:16 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:16 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.017447040499564116
59:16 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:16 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:16 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:16 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [281, 0, 36, 183, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:16 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:16 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:16 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:16 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:16 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:16 INFO    opendrift.models.basemodel:2882: 2023-08-22 19:58:56.855288 - step 13 of 96 - 500 active elements (0 deactivated)
59:16 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:16 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:16 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 19:00:00 (before)
                2023-08-22 20:00:00 (after)
59:16 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 19:00:00) in space  (linearNDFast)
59:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:16 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 20:00:00) in space  (linearNDFast)
59:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:16 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 19:00:00, weight 0.02) and
                      after (2023-08-22 20:00:00, weight 0.98) in time
59:16 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:16 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.273073712528884 degrees.
59:16 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.486441668972965 and -59.273073712528884 degrees.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:16 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:16 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:16 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:16 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:16 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:16 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:16 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:16 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:16 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:16 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:16 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0568086 (min) 0.145613 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0388942 (min) 0.168337 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.57778 (min) 4.84922 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.47975 (min) 2.05308 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.37775 (min) 23.0598 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5904 (min) 17.754 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.931 (min) 32.5273 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -4.97758e-06 (min) 7.61125e-05 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:16 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:16 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:16 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:16 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.67833737293152
59:16 DEBUG   opendrift.models.basemodel:1543:               10.513569422184892 <- longitude -> 10.726937329942157
59:16 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   -0.01842560487454581
59:16 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:16 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:16 DEBUG   opendrift.models.basemodel:836: Lifting 8 elements to seafloor.
59:16 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:16 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
59:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2]
59:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 0]
59:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 191.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.   9.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:16 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:16 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.01941935185879546
59:16 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:16 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:16 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:16 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:16 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [267, 0, 34, 199, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:16 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:16 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:16 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:16 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:16 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:16 INFO    opendrift.models.basemodel:2882: 2023-08-22 20:28:56.855288 - step 14 of 96 - 500 active elements (0 deactivated)
59:16 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:16 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:16 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:16 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:16 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:16 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:16 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:16 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 20:00:00 (before)
                2023-08-22 21:00:00 (after)
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:18 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:18 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 33x26x6) for time after (2023-08-22 21:00:00)
59:18 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 20:00:00) in space  (linearNDFast)
59:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:18 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 21:00:00) in space  (linearNDFast)
59:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:18 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 20:00:00, weight 0.52) and
                      after (2023-08-22 21:00:00, weight 0.48) in time
59:18 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:18 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.26897212520738 degrees.
59:18 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.26897212520738 degrees.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:18 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:18 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:18 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:18 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:18 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:18 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:18 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0540839 (min) 0.15879 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.053145 (min) 0.177549 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.48376 (min) 4.9143 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.7518 (min) 2.36878 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.43662 (min) 23.0598 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5892 (min) 17.7279 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9401 (min) 32.5358 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -1.14199e-05 (min) 6.70746e-05 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:18 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:18 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:18 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.68037811372458
59:18 DEBUG   opendrift.models.basemodel:1543:               10.513569422184892 <- longitude -> 10.731038914054952
59:18 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   -0.03550706946128568
59:18 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:18 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:18 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:18 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:18 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
59:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0]
59:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3]
59:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 204.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.   9.   0.]
 [  1.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:18 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:18 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02130182719219516
59:18 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:18 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:18 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:18 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:18 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [254, 0, 33, 213, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:18 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:18 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:18 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:18 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:18 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:18 INFO    opendrift.models.basemodel:2882: 2023-08-22 20:58:56.855288 - step 15 of 96 - 500 active elements (0 deactivated)
59:18 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:18 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:18 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 20:00:00 (before)
                2023-08-22 21:00:00 (after)
59:18 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 20:00:00) in space  (linearNDFast)
59:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:18 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 21:00:00) in space  (linearNDFast)
59:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:18 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 20:00:00, weight 0.02) and
                      after (2023-08-22 21:00:00, weight 0.98) in time
59:18 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:18 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.264803804349825 degrees.
59:18 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.264803804349825 degrees.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:18 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:18 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:18 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:18 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:18 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:18 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:18 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:18 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:18 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:18 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:18 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0513452 (min) 0.152207 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0649502 (min) 0.194195 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.39539 (min) 5.05339 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.02732 (min) 2.81439 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.51762 (min) 23.1631 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5892 (min) 17.7008 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9433 (min) 32.5344 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.10237e-05 (min) 5.7962e-05 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:18 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:18 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:18 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:18 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.682302746714754
59:18 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.735207229571866
59:18 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   0.0
59:18 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:18 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:18 DEBUG   opendrift.models.basemodel:836: Lifting 7 elements to seafloor.
59:18 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:18 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
59:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 3 0 0 0 0 0 0 0 0 0]
59:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 3 3 3 3 3 3 3 3]
59:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 218.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  10.   0.]
 [  2.   0.   0.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:18 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:18 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02374454908777399
59:18 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:18 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:18 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:18 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:18 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [241, 0, 33, 226, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:18 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:18 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:18 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:18 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:18 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:18 INFO    opendrift.models.basemodel:2882: 2023-08-22 21:28:56.855288 - step 16 of 96 - 500 active elements (0 deactivated)
59:18 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:18 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:18 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:18 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:18 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:18 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:18 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:18 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 21:00:00 (before)
                2023-08-22 22:00:00 (after)
59:19 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:19 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:19 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:19 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:19 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:19 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:19 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 33x26x6) for time after (2023-08-22 22:00:00)
59:19 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 21:00:00) in space  (linearNDFast)
59:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:19 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 22:00:00) in space  (linearNDFast)
59:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:19 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 21:00:00, weight 0.52) and
                      after (2023-08-22 22:00:00, weight 0.48) in time
59:19 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:19 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.26058902459528 degrees.
59:20 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166190687 and -59.26058902459528 degrees.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:20 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:20 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:20 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:20 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:20 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:20 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:20 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:20 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:20 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0486397 (min) 0.168051 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.073972 (min) 0.209977 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.89116 (min) 5.319 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.94788 (min) 2.67259 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.60356 (min) 23.3387 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5902 (min) 17.6754 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.0439 (min) 32.5334 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.67978e-05 (min) 4.99321e-05 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:20 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:20 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:20 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.68437103815228
59:20 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.739422015535048
59:20 DEBUG   opendrift.models.basemodel:1548:               -23.059791564941406   <- z ->   -0.15412989078226924
59:20 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:20 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:20 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:20 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:20 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
59:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
59:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
59:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 232.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  11.   0.]
 [  2.   0.   1.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:20 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:20 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02558426704835097
59:20 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:20 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:20 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:20 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:20 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
59:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
59:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [227, 0, 42, 231, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:20 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:20 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:20 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:20 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:20 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:20 INFO    opendrift.models.basemodel:2882: 2023-08-22 21:58:56.855288 - step 17 of 96 - 500 active elements (0 deactivated)
59:20 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:20 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:20 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 21:00:00 (before)
                2023-08-22 22:00:00 (after)
59:20 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 21:00:00) in space  (linearNDFast)
59:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:20 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 22:00:00) in space  (linearNDFast)
59:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:20 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 21:00:00, weight 0.02) and
                      after (2023-08-22 22:00:00, weight 0.98) in time
59:20 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:20 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644165307429 and -59.256468941325956 degrees.
59:20 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644165307429 and -59.256468941325956 degrees.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:20 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:20 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:20 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:20 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:20 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:20 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:20 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:20 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:20 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:20 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:20 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0459354 (min) 0.178511 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0829184 (min) 0.230136 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     x_wind: 4.24752 (min) 5.59138 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.77976 (min) 2.61274 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.69791 (min) 23.5247 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5911 (min) 17.6518 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9686 (min) 32.5323 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -3.51653e-05 (min) 4.19415e-05 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:20 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:20 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:20 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:20 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.686886928143544
59:20 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.743542090953841
59:20 DEBUG   opendrift.models.basemodel:1548:               -22.442639798106025   <- z ->   -0.17379168699169167
59:20 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:20 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:20 DEBUG   opendrift.models.basemodel:836: Lifting 4 elements to seafloor.
59:20 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:20 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
59:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 2 0]
59:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 3 0 3 3 3 3 3 3 0 3]
59:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 246.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  12.   0.]
 [  4.   0.  11.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:20 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:20 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02752854657369474
59:20 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:20 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:20 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:20 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:20 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:20 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 57
59:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 57 elements
59:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [216, 0, 97, 187, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:20 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:20 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:20 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:20 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:20 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:20 INFO    opendrift.models.basemodel:2882: 2023-08-22 22:28:56.855288 - step 18 of 96 - 500 active elements (0 deactivated)
59:20 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:20 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:20 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:20 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:20 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:20 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:20 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:20 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 22:00:00 (before)
                2023-08-22 23:00:00 (after)
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:21 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:21 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 34x26x6) for time after (2023-08-22 23:00:00)
59:21 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 22:00:00) in space  (linearNDFast)
59:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:21 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 23:00:00) in space  (linearNDFast)
59:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:21 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 22:00:00, weight 0.52) and
                      after (2023-08-22 23:00:00, weight 0.48) in time
59:21 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:21 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.252097098006985 degrees.
59:21 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.252097098006985 degrees.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:21 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:21 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:21 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:21 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:21 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:21 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:21 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0458617 (min) 0.210136 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0891964 (min) 0.243348 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     x_wind: 4.9761 (min) 5.8371 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.78597 (min) 2.28211 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.81875 (min) 23.7275 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5913 (min) 17.6168 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9802 (min) 32.5313 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -4.38044e-05 (min) 3.84253e-05 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:21 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:21 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:21 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.69044648530274
59:21 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.747913945859723
59:21 DEBUG   opendrift.models.basemodel:1548:               -21.051525115966797   <- z ->   -0.03565823989911472
59:21 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:21 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:21 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
59:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0]
59:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3]
59:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 261.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  13.   0.]
 [  4.   0.  68.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:21 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:21 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02831116960349484
59:21 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:21 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:21 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:21 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 36
59:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 36 elements
59:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [202, 0, 125, 173, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:21 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:21 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:21 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:21 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:21 INFO    opendrift.models.basemodel:2882: 2023-08-22 22:58:56.855288 - step 19 of 96 - 500 active elements (0 deactivated)
59:21 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:21 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:21 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 22:00:00 (before)
                2023-08-22 23:00:00 (after)
59:21 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 22:00:00) in space  (linearNDFast)
59:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:21 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-22 23:00:00) in space  (linearNDFast)
59:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:21 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 22:00:00, weight 0.02) and
                      after (2023-08-22 23:00:00, weight 0.98) in time
59:21 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:21 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166689375 and -59.24805676024313 degrees.
59:21 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166689375 and -59.24805676024313 degrees.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:21 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:21 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:21 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:21 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:21 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:21 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:21 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:21 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:21 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:21 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:21 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0458837 (min) 0.228989 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0953773 (min) 0.268321 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.43808 (min) 6.11623 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.74906 (min) 1.96089 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.91644 (min) 23.9289 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.5927 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9906 (min) 32.5302 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.14488e-05 (min) 3.50717e-05 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:21 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:21 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:21 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:21 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.69337037769743
59:21 DEBUG   opendrift.models.basemodel:1543:               10.513569422184885 <- longitude -> 10.751954269847303
59:21 DEBUG   opendrift.models.basemodel:1548:               -23.02272155784718   <- z ->   -0.0845517545655392
59:21 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:21 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:21 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:21 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
59:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0]
59:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3]
59:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 273.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  20.   0.]
 [  4.   0. 104.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:21 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:21 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.029814442009182894
59:21 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:21 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:21 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:21 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:21 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:21 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 95
59:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 95 elements
59:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [190, 0, 212, 98, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:21 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:21 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:21 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:21 DEBUG   opendrift.models.basemodel:836: Lifting 4 elements to seafloor.
59:21 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:21 INFO    opendrift.models.basemodel:2882: 2023-08-22 23:28:56.855288 - step 20 of 96 - 500 active elements (0 deactivated)
59:21 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:21 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:21 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:21 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:21 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:21 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:21 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:21 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 23:00:00 (before)
                2023-08-23 00:00:00 (after)
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:24 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:24 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 35x25x6) for time after (2023-08-23 00:00:00)
59:24 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 23:00:00) in space  (linearNDFast)
59:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:24 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 00:00:00) in space  (linearNDFast)
59:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:24 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 23:00:00, weight 0.52) and
                      after (2023-08-23 00:00:00, weight 0.48) in time
59:24 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:24 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.245678291833414 degrees.
59:24 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.245678291833414 degrees.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:24 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:24 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:24 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:24 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:24 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:24 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:24 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0496043 (min) 0.254338 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.094951 (min) 0.280873 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.58987 (min) 6.58316 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.07218 (min) 2.32954 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.91644 (min) 24.0701 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.5392 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9232 (min) 32.5292 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.4047e-05 (min) 3.98329e-05 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:24 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:24 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:24 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.69655358517674
59:24 DEBUG   opendrift.models.basemodel:1543:               10.513569422184888 <- longitude -> 10.75433274551198
59:24 DEBUG   opendrift.models.basemodel:1548:               -21.83562073660401   <- z ->   -0.17999463866456558
59:24 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:24 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:24 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:24 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:24 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 2]
59:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 0]
59:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 278.   0.]
 [  0.   0.   0.   0.   0.]
 [ 12.   0.   0.  28.   0.]
 [  4.   0. 199.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:24 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:24 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.035034093045067674
59:24 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:24 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:24 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:24 DEBUG   opendrift.models.oceandrift:582: 52 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 36 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 39 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 35 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 36 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 35 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 34 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 35 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 31 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 30 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 27
59:24 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 27 elements
59:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:24 INFO    opendrift.models.chemicaldrift:1861: partitioning: [187, 0, 225, 88, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:24 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:24 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:24 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:24 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:24 INFO    opendrift.models.basemodel:2882: 2023-08-22 23:58:56.855288 - step 21 of 96 - 500 active elements (0 deactivated)
59:24 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:24 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:24 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-22 23:00:00 (before)
                2023-08-23 00:00:00 (after)
59:24 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-22 23:00:00) in space  (linearNDFast)
59:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:24 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 00:00:00) in space  (linearNDFast)
59:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:24 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-22 23:00:00, weight 0.02) and
                      after (2023-08-23 00:00:00, weight 0.98) in time
59:24 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:24 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.2430712370953 degrees.
59:24 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.2430712370953 degrees.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:24 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:24 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:24 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:24 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:24 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:24 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:24 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:24 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:24 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:24 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:24 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0534593 (min) 0.280633 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.10173 (min) 0.290883 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.6969 (min) 7.08462 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.29231 (min) 2.86435 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.91644 (min) 24.2271 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.5072 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1756 (min) 32.5281 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.52128e-05 (min) 4.48891e-05 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:24 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:24 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:24 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:24 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.70109282154542
59:24 DEBUG   opendrift.models.basemodel:1543:               10.513569422184892 <- longitude -> 10.756939791469188
59:24 DEBUG   opendrift.models.basemodel:1548:               -22.115726470947266   <- z ->   -0.1084435885683511
59:24 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:24 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:24 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:24 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:24 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
59:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0 0 0 0 0 2 0 0 0 0 2]
59:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 3 3 3 3 0 3 3 3 3 0]
59:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 289.   0.]
 [  0.   0.   0.   0.   0.]
 [ 16.   0.   0.  40.   0.]
 [  4.   0. 226.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:24 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:24 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04127982217588308
59:24 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:24 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:24 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:24 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 32 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 33 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:24 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:24 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:24 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 42
59:24 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 42 elements
59:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:24 INFO    opendrift.models.chemicaldrift:1861: partitioning: [180, 0, 260, 60, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:24 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:24 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:24 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:24 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:24 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:24 INFO    opendrift.models.basemodel:2882: 2023-08-23 00:28:56.855288 - step 22 of 96 - 500 active elements (0 deactivated)
59:24 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:24 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:24 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:24 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:24 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:24 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:24 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:24 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 00:00:00 (before)
                2023-08-23 01:00:00 (after)
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:25 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:25 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 37x25x6) for time after (2023-08-23 01:00:00)
59:25 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 00:00:00) in space  (linearNDFast)
59:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:25 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 01:00:00) in space  (linearNDFast)
59:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:25 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 00:00:00, weight 0.52) and
                      after (2023-08-23 01:00:00, weight 0.48) in time
59:25 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:25 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.24024419401098 degrees.
59:25 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48644166720641 and -59.24024419401098 degrees.
59:25 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:25 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:25 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:25 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:25 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:25 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:25 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:25 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:25 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:25 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:25 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:25 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:25 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:25 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:25 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:25 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:25 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:25 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:25 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:25 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:25 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:25 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0615967 (min) 0.280317 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.101236 (min) 0.276782 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.69681 (min) 7.42179 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.2381 (min) 2.67338 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.91644 (min) 24.4035 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.4833 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 27.9569 (min) 32.5278 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.93345e-05 (min) 5.6652e-05 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:25 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:25 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:25 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:25 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.705793779247216
59:25 DEBUG   opendrift.models.basemodel:1543:               10.513569422184892 <- longitude -> 10.75976684760315
59:25 DEBUG   opendrift.models.basemodel:1548:               -23.10811413963087   <- z ->   -0.06051248497712991
59:25 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:25 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:25 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:25 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:25 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
59:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 2 0 0 0 2 0]
59:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 0 3 3 3 0 3]
59:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 299.   0.]
 [  0.   0.   0.   0.   0.]
 [ 19.   0.   0.  43.   0.]
 [  4.   0. 268.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:25 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:25 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04421158836338353
59:25 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:25 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:25 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:25 DEBUG   opendrift.models.oceandrift:582: 30 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:25 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:25 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 30 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 33 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:25 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:25 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
59:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
59:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [173, 0, 265, 62, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:26 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:26 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:26 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:26 INFO    opendrift.models.basemodel:2882: 2023-08-23 00:58:56.855288 - step 23 of 96 - 500 active elements (0 deactivated)
59:26 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:26 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:26 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:26 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:26 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:26 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:26 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 00:00:00 (before)
                2023-08-23 01:00:00 (after)
59:26 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 00:00:00) in space  (linearNDFast)
59:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:26 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 01:00:00) in space  (linearNDFast)
59:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:26 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 00:00:00, weight 0.02) and
                      after (2023-08-23 01:00:00, weight 0.98) in time
59:26 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:26 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.484594401826925 and -59.23669281960169 degrees.
59:26 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.484594401826925 and -59.23669281960169 degrees.
59:26 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:26 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:26 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:26 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:26 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:26 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:26 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:26 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:26 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:26 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:26 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:26 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:26 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:26 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:26 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:26 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:26 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:26 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:26 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:26 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:26 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0698898 (min) 0.270756 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.100635 (min) 0.283264 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.72242 (min) 7.76545 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.07733 (min) 2.46774 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 9.95612 (min) 24.6335 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.474 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.148 (min) 32.5276 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -6.31645e-05 (min) 6.86588e-05 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:26 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:26 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:26 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:26 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.71023461634731
59:26 DEBUG   opendrift.models.basemodel:1543:               10.515416685803379 <- longitude -> 10.76331821327635
59:26 DEBUG   opendrift.models.basemodel:1548:               -23.623052357052668   <- z ->   -0.04678980718735137
59:26 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:26 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:26 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:26 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
59:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 0 0 0 2 0 0 0 2 0 0 0]
59:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 3 3 3 0 3 3 3 0 3 3 3]
59:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 309.   0.]
 [  0.   0.   0.   0.   0.]
 [ 25.   0.   0.  51.   0.]
 [  4.   0. 284.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:26 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:26 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.047391492768111707
59:26 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:26 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:26 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:26 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 30 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:26 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:26 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
59:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
59:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [169, 0, 273, 58, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:26 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:26 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:26 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:26 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:26 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:26 INFO    opendrift.models.basemodel:2882: 2023-08-23 01:28:56.855288 - step 24 of 96 - 500 active elements (0 deactivated)
59:26 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:26 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:26 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:26 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:26 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:26 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:26 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:26 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 01:00:00 (before)
                2023-08-23 02:00:00 (after)
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:27 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:27 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 38x25x6) for time after (2023-08-23 02:00:00)
59:27 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 01:00:00) in space  (linearNDFast)
59:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:27 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 02:00:00) in space  (linearNDFast)
59:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:27 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 01:00:00, weight 0.52) and
                      after (2023-08-23 02:00:00, weight 0.48) in time
59:27 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:27 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.482474824870906 and -59.23013242940608 degrees.
59:27 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.482474824870906 and -59.23013242940608 degrees.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:27 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:27 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:27 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:27 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:27 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:27 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:27 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0741798 (min) 0.265631 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.103521 (min) 0.277906 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.30417 (min) 7.24296 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.85266 (min) 2.31147 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.0045 (min) 25.0085 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5914 (min) 17.4226 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1072 (min) 32.5281 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000124109 (min) 7.3391e-05 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:27 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:27 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:27 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.714643706033584
59:27 DEBUG   opendrift.models.basemodel:1543:               10.5175362518009 <- longitude -> 10.76987859450424
59:27 DEBUG   opendrift.models.basemodel:1548:               -23.081678984573347   <- z ->   -0.14474934246384316
59:27 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:27 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:27 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:27 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:27 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
59:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 2 2 0 0 0]
59:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 0 0 3 3 3]
59:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 320.   0.]
 [  0.   0.   0.   0.   0.]
 [ 28.   0.   0.  61.   0.]
 [  4.   0. 308.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:27 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:27 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0404182528169297
59:27 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:27 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:27 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 35 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
59:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
59:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [161, 0, 284, 55, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:27 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:27 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:27 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 4 elements to seafloor.
59:27 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:27 INFO    opendrift.models.basemodel:2882: 2023-08-23 01:58:56.855288 - step 25 of 96 - 500 active elements (0 deactivated)
59:27 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:27 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:27 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 01:00:00 (before)
                2023-08-23 02:00:00 (after)
59:27 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 01:00:00) in space  (linearNDFast)
59:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:27 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 02:00:00) in space  (linearNDFast)
59:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:27 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 01:00:00, weight 0.02) and
                      after (2023-08-23 02:00:00, weight 0.98) in time
59:27 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:27 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48002151888018 and -59.226614671420414 degrees.
59:27 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.48002151888018 and -59.226614671420414 degrees.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:27 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:27 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:27 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:27 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:27 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:27 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:27 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:27 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:27 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:27 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:27 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0783244 (min) 0.29703 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.106533 (min) 0.280472 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     x_wind: 4.87229 (min) 7.30194 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.52235 (min) 2.19728 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.0695 (min) 25.292 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.592 (min) 17.4281 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.201 (min) 32.5301 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000136619 (min) 7.78587e-05 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:27 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:27 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:27 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:27 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.71825637400423
59:27 DEBUG   opendrift.models.basemodel:1543:               10.519989562503165 <- longitude -> 10.773396351915414
59:27 DEBUG   opendrift.models.basemodel:1548:               -24.92280710811478   <- z ->   -0.12624942510419337
59:27 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:27 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:27 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:27 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:27 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 0]
59:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 3]
59:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 326.   0.]
 [  0.   0.   0.   0.   0.]
 [ 29.   0.   0.  70.   0.]
 [  4.   0. 331.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:27 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:27 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04058801840437529
59:27 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:27 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:27 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:27 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 32 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:27 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
59:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
59:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [156, 0, 293, 51, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:27 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:27 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:27 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:27 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:27 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:27 INFO    opendrift.models.basemodel:2882: 2023-08-23 02:28:56.855288 - step 26 of 96 - 500 active elements (0 deactivated)
59:27 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:27 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:27 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:27 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:27 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:27 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:27 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:27 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 02:00:00 (before)
                2023-08-23 03:00:00 (after)
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:29 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:29 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 40x25x6) for time after (2023-08-23 03:00:00)
59:29 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 02:00:00) in space  (linearNDFast)
59:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:29 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 03:00:00) in space  (linearNDFast)
59:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:29 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 02:00:00, weight 0.52) and
                      after (2023-08-23 03:00:00, weight 0.48) in time
59:29 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:29 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47733137210969 and -59.22402919087652 degrees.
59:29 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47733137210969 and -59.22402919087652 degrees.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:29 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:29 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:29 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:29 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:29 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:29 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:29 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0839077 (min) 0.305861 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.103707 (min) 0.261934 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.44475 (min) 7.11539 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.35424 (min) 1.75783 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.1467 (min) 25.5429 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5957 (min) 17.4088 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.247 (min) 32.5146 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000151598 (min) 8.58619e-05 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:29 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:29 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:29 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.721731422490855
59:29 DEBUG   opendrift.models.basemodel:1543:               10.522679706586127 <- longitude -> 10.775981831714939
59:29 DEBUG   opendrift.models.basemodel:1548:               -24.239560386838377   <- z ->   -0.13128335509714517
59:29 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:29 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:29 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:29 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:29 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
59:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0 2 2 2]
59:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 0 0 0]
59:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 332.   0.]
 [  0.   0.   0.   0.   0.]
 [ 33.   0.   0.  81.   0.]
 [  4.   0. 352.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:29 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:29 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.03795296953162058
59:29 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:29 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:29 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
59:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
59:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [154, 0, 290, 56, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:29 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:29 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:29 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:29 INFO    opendrift.models.basemodel:2882: 2023-08-23 02:58:56.855288 - step 27 of 96 - 500 active elements (0 deactivated)
59:29 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:29 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:29 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 02:00:00 (before)
                2023-08-23 03:00:00 (after)
59:29 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 02:00:00) in space  (linearNDFast)
59:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:29 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 03:00:00) in space  (linearNDFast)
59:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:29 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 02:00:00, weight 0.02) and
                      after (2023-08-23 03:00:00, weight 0.98) in time
59:29 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:29 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.475919858910764 and -59.221142852082515 degrees.
59:29 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.475919858910764 and -59.221142852082515 degrees.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:29 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:29 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:29 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:29 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:29 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:29 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:29 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:29 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:29 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:29 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:29 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0895434 (min) 0.327958 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0969273 (min) 0.258826 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.46657 (min) 6.89938 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.643413 (min) 1.54573 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.1559 (min) 26.2829 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5964 (min) 17.3694 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1441 (min) 32.559 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000168506 (min) 9.39935e-05 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:29 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:29 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:29 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:29 DEBUG   opendrift.models.basemodel:1538:               57.55762996506783 <- latitude  -> 57.72471666292915
59:29 DEBUG   opendrift.models.basemodel:1543:               10.524091222988337 <- longitude -> 10.778868173613077
59:29 DEBUG   opendrift.models.basemodel:1548:               -25.270708313076145   <- z ->   -0.03729417190183657
59:29 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:29 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 5 elements to seafloor.
59:29 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:29 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
59:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2 2 0 2 2 0 2 0 0 0 2 2 0 0]
59:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0 0 3 0 0 3 0 3 3 3 0 0 3 3]
59:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 343.   0.]
 [  0.   0.   0.   0.   0.]
 [ 41.   0.   0.  97.   0.]
 [  4.   0. 369.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:29 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:29 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.035196667090242606
59:29 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:29 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:29 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:29 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:29 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
59:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
59:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [151, 0, 294, 55, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:29 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:29 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:29 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:29 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:29 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:29 INFO    opendrift.models.basemodel:2882: 2023-08-23 03:28:56.855288 - step 28 of 96 - 500 active elements (0 deactivated)
59:29 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:29 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:29 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:29 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:29 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:29 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:29 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:29 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 03:00:00 (before)
                2023-08-23 04:00:00 (after)
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:31 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:31 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 41x25x6) for time after (2023-08-23 04:00:00)
59:31 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 03:00:00) in space  (linearNDFast)
59:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:31 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 04:00:00) in space  (linearNDFast)
59:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:31 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 03:00:00, weight 0.52) and
                      after (2023-08-23 04:00:00, weight 0.48) in time
59:31 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:31 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47511022353662 and -59.22039073308374 degrees.
59:31 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47511022353662 and -59.22039073308374 degrees.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:31 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:31 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:31 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:31 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:31 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:31 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:31 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0907851 (min) 0.324371 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0885818 (min) 0.248153 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.99359 (min) 7.19872 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.09102 (min) 1.58791 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.1362 (min) 27.7055 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5961 (min) 17.3428 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2377 (min) 32.5147 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000175817 (min) 8.79462e-05 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:31 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:31 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:31 DEBUG   opendrift.models.basemodel:1538:               57.55963774045587 <- latitude  -> 57.72762045467074
59:31 DEBUG   opendrift.models.basemodel:1543:               10.524900860721367 <- longitude -> 10.779620302680245
59:31 DEBUG   opendrift.models.basemodel:1548:               -22.65350565525271   <- z ->   -0.039961250338348187
59:31 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:31 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:31 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
59:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 2 2 0 0 2 0 0 2 0]
59:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 0 0 3 3 0 3 3 0 3]
59:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 352.   0.]
 [  0.   0.   0.   0.   0.]
 [ 46.   0.   0. 106.   0.]
 [  4.   0. 390.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:31 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:31 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0385195020736784
59:31 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:31 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:31 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:31 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 27 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
59:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
59:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [147, 0, 294, 59, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:31 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:31 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:31 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:31 INFO    opendrift.models.basemodel:2882: 2023-08-23 03:58:56.855288 - step 29 of 96 - 500 active elements (0 deactivated)
59:31 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:31 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:31 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 03:00:00 (before)
                2023-08-23 04:00:00 (after)
59:31 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 03:00:00) in space  (linearNDFast)
59:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:31 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 04:00:00) in space  (linearNDFast)
59:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:31 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 03:00:00, weight 0.02) and
                      after (2023-08-23 04:00:00, weight 0.98) in time
59:31 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:31 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.472444158023144 and -59.21177506274101 degrees.
59:31 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.472444158023144 and -59.21177506274101 degrees.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:31 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:31 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:31 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:31 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:31 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:31 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:31 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:31 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:31 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:31 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:31 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0749635 (min) 0.332156 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0632536 (min) 0.261767 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.24168 (min) 7.49126 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.37897 (min) 1.64405 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.2299 (min) 28.7447 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5964 (min) 17.3352 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1894 (min) 32.5386 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.00020561 (min) 8.82259e-05 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:31 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:31 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:31 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:31 DEBUG   opendrift.models.basemodel:1538:               57.56192255045836 <- latitude  -> 57.72999048362355
59:31 DEBUG   opendrift.models.basemodel:1543:               10.527566920981998 <- longitude -> 10.788235964652095
59:31 DEBUG   opendrift.models.basemodel:1548:               -26.0462646484375   <- z ->   -0.08121357841046084
59:31 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:31 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:31 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0 0 2]
59:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3 3 0]
59:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 356.   0.]
 [  0.   0.   0.   0.   0.]
 [ 49.   0.   0. 116.   0.]
 [  4.   0. 405.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:31 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:31 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04195375124021546
59:31 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:31 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:31 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 26 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 31 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 29 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 28 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 22 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:31 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
59:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
59:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [146, 0, 292, 62, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:31 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:31 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:31 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:31 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:31 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:31 INFO    opendrift.models.basemodel:2882: 2023-08-23 04:28:56.855288 - step 30 of 96 - 500 active elements (0 deactivated)
59:31 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:31 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:31 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:31 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:31 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:31 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:31 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:31 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 04:00:00 (before)
                2023-08-23 05:00:00 (after)
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:33 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:33 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 42x25x7) for time after (2023-08-23 05:00:00)
59:33 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 04:00:00) in space  (linearNDFast)
59:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:33 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 05:00:00) in space  (linearNDFast)
59:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:33 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 04:00:00, weight 0.52) and
                      after (2023-08-23 05:00:00, weight 0.48) in time
59:33 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:33 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47042634821862 and -59.20364297575571 degrees.
59:33 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.47042634821862 and -59.20364297575571 degrees.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:33 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:33 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:33 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:33 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:33 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:33 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:33 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0596622 (min) 0.32625 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0236713 (min) 0.234219 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.72866 (min) 7.12824 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.3308 (min) 1.74977 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.2919 (min) 29.7284 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5951 (min) 17.3011 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3254 (min) 32.5282 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000243596 (min) 9.10617e-05 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:33 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:33 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:33 DEBUG   opendrift.models.basemodel:1538:               57.56547888140617 <- latitude  -> 57.73175991823839
59:33 DEBUG   opendrift.models.basemodel:1543:               10.529584742562747 <- longitude -> 10.79636803955077
59:33 DEBUG   opendrift.models.basemodel:1548:               -25.467444667239924   <- z ->   -0.16434044875089437
59:33 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:33 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:33 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
59:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2 2 0 0 2]
59:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0 0 3 3 0]
59:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 361.   0.]
 [  0.   0.   0.   0.   0.]
 [ 53.   0.   0. 121.   0.]
 [  4.   0. 411.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:33 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:33 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.038163028232436294
59:33 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:33 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:33 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
59:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
59:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [145, 0, 287, 68, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:33 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:33 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:33 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:33 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:33 INFO    opendrift.models.basemodel:2882: 2023-08-23 04:58:56.855288 - step 31 of 96 - 500 active elements (0 deactivated)
59:33 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:33 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:33 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 04:00:00 (before)
                2023-08-23 05:00:00 (after)
59:33 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 04:00:00) in space  (linearNDFast)
59:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:33 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 05:00:00) in space  (linearNDFast)
59:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:33 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 04:00:00, weight 0.02) and
                      after (2023-08-23 05:00:00, weight 0.98) in time
59:33 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:33 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46671208846301 and -59.19665689048589 degrees.
59:33 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46671208846301 and -59.19665689048589 degrees.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:33 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:33 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:33 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:33 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:33 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:33 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:33 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:33 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:33 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:33 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:33 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0615558 (min) 0.308412 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.0125609 (min) 0.215946 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.19388 (min) 6.75336 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.28118 (min) 1.85724 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 30.8851 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5964 (min) 17.2885 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1488 (min) 32.5184 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000249193 (min) 9.38894e-05 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:33 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:33 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:33 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:33 DEBUG   opendrift.models.basemodel:1538:               57.56859529204788 <- latitude  -> 57.73344347725287
59:33 DEBUG   opendrift.models.basemodel:1543:               10.533298991692153 <- longitude -> 10.803354139286174
59:33 DEBUG   opendrift.models.basemodel:1548:               -26.403744205540413   <- z ->   -0.07848749013430933
59:33 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:33 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:33 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:33 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
59:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 0 0 0 2 0]
59:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 3 3 3 0 3]
59:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 367.   0.]
 [  0.   0.   0.   0.   0.]
 [ 57.   0.   0. 128.   0.]
 [  4.   0. 417.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:33 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:33 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.034441636352350355
59:33 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:33 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:33 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:33 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 25 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 23 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 24 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:33 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:33 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
59:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
59:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [143, 0, 280, 77, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:33 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:33 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:33 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:33 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:33 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:33 INFO    opendrift.models.basemodel:2882: 2023-08-23 05:28:56.855288 - step 32 of 96 - 500 active elements (0 deactivated)
59:33 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:33 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:33 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:33 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:33 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:33 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:33 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:33 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 05:00:00 (before)
                2023-08-23 06:00:00 (after)
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:34 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:34 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 42x26x7) for time after (2023-08-23 06:00:00)
59:34 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 05:00:00) in space  (linearNDFast)
59:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:34 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 06:00:00) in space  (linearNDFast)
59:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:34 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 05:00:00, weight 0.52) and
                      after (2023-08-23 06:00:00, weight 0.48) in time
59:34 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:34 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.18973891141309 degrees.
59:34 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.18973891141309 degrees.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:34 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:34 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:34 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:34 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:34 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:34 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:34 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0603659 (min) 0.308291 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.0390727 (min) 0.220122 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.00504 (min) 6.09749 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.47389 (min) 1.86867 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 31.7805 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5982 (min) 17.2664 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3383 (min) 32.5129 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000242668 (min) 9.17946e-05 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:34 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:34 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:34 DEBUG   opendrift.models.basemodel:1538:               57.57142237472268 <- latitude  -> 57.73473260445949
59:34 DEBUG   opendrift.models.basemodel:1543:               10.534906094435684 <- longitude -> 10.810272099870932
59:34 DEBUG   opendrift.models.basemodel:1548:               -28.03018645858441   <- z ->   -0.2820862959434839
59:34 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:34 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:34 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:34 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:34 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
59:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2 0 0 2 2]
59:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0 3 3 0 0]
59:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 370.   0.]
 [  0.   0.   0.   0.   0.]
 [ 63.   0.   0. 140.   0.]
 [  4.   0. 426.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:34 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:34 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02862900435078448
59:34 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:34 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:34 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
59:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
59:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [146, 0, 268, 86, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:34 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:34 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:34 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:34 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:34 INFO    opendrift.models.basemodel:2882: 2023-08-23 05:58:56.855288 - step 33 of 96 - 500 active elements (0 deactivated)
59:34 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:34 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:34 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 05:00:00 (before)
                2023-08-23 06:00:00 (after)
59:34 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 05:00:00) in space  (linearNDFast)
59:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:34 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 06:00:00) in space  (linearNDFast)
59:34 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:34 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 05:00:00, weight 0.02) and
                      after (2023-08-23 06:00:00, weight 0.98) in time
59:34 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:34 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.18347644952109 degrees.
59:34 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.18347644952109 degrees.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:34 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:34 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:34 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:34 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:34 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:34 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:34 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:34 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:34 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:34 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:34 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0593378 (min) 0.283991 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.0727087 (min) 0.196012 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     x_wind: 4.59524 (min) 5.4152 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.67412 (min) 1.92048 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 32.333 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.5999 (min) 17.2744 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1764 (min) 32.5125 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000228901 (min) 0.00015516 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:34 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:34 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:34 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:34 DEBUG   opendrift.models.basemodel:1538:               57.57379658669729 <- latitude  -> 57.73505004929929
59:34 DEBUG   opendrift.models.basemodel:1543:               10.534906094435684 <- longitude -> 10.8165345631126
59:34 DEBUG   opendrift.models.basemodel:1548:               -27.821594058243466   <- z ->   -0.05693223233679323
59:34 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:34 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 5 elements to seafloor.
59:34 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:34 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
59:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 0 0 0 0 0 2 0 0 2 2 2 0 2]
59:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 3 3 3 3 3 0 3 3 0 0 0 3 0]
59:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 380.   0.]
 [  0.   0.   0.   0.   0.]
 [ 70.   0.   0. 149.   0.]
 [  4.   0. 429.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:34 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:34 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02374044316550557
59:34 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:34 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:34 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 19 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:34 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:34 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:34 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
59:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
59:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [143, 0, 261, 96, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:34 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:34 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:34 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:34 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:34 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:34 INFO    opendrift.models.basemodel:2882: 2023-08-23 06:28:56.855288 - step 34 of 96 - 500 active elements (0 deactivated)
59:34 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:34 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:34 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:34 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:34 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:34 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:34 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:34 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 06:00:00 (before)
                2023-08-23 07:00:00 (after)
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:36 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:36 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 41x26x7) for time after (2023-08-23 07:00:00)
59:36 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 06:00:00) in space  (linearNDFast)
59:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:36 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 07:00:00) in space  (linearNDFast)
59:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:36 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 06:00:00, weight 0.52) and
                      after (2023-08-23 07:00:00, weight 0.48) in time
59:36 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:36 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.17742396024643 degrees.
59:36 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.17742396024643 degrees.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:36 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:36 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:36 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:36 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:36 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:36 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:36 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0568887 (min) 0.262388 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.0885028 (min) 0.186164 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.63696 (min) 5.14357 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.60566 (min) 1.92077 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 32.9084 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6009 (min) 17.2471 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3317 (min) 32.5125 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000185838 (min) 0.000138049 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:36 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:36 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:36 DEBUG   opendrift.models.basemodel:1538:               57.575534674626056 <- latitude  -> 57.73558328618964
59:36 DEBUG   opendrift.models.basemodel:1543:               10.534906094435684 <- longitude -> 10.822587059652072
59:36 DEBUG   opendrift.models.basemodel:1548:               -26.763725940199237   <- z ->   0.0
59:36 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:36 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:36 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:36 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:36 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2 2]
59:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0 0]
59:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 384.   0.]
 [  0.   0.   0.   0.   0.]
 [ 73.   0.   0. 152.   0.]
 [  4.   0. 432.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:36 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:36 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.021000973946290816
59:36 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:36 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:36 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:36 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 20 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
59:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
59:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [142, 0, 254, 104, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:36 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:36 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:36 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:36 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:36 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:36 INFO    opendrift.models.basemodel:2882: 2023-08-23 06:58:56.855288 - step 35 of 96 - 500 active elements (0 deactivated)
59:36 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:36 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:36 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 06:00:00 (before)
                2023-08-23 07:00:00 (after)
59:36 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 06:00:00) in space  (linearNDFast)
59:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:36 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 07:00:00) in space  (linearNDFast)
59:36 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:36 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 06:00:00, weight 0.02) and
                      after (2023-08-23 07:00:00, weight 0.98) in time
59:36 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:36 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.17117566644564 degrees.
59:36 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.17117566644564 degrees.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:36 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:36 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:36 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:36 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:36 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:36 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:36 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:36 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:36 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:36 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:36 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.063778 (min) 0.239093 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.128675 (min) 0.136743 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.63106 (min) 4.90905 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.37922 (min) 2.02915 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.1313 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6017 (min) 17.2495 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3576 (min) 32.5124 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000177664 (min) 0.000141062 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:36 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:36 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:36 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:36 DEBUG   opendrift.models.basemodel:1538:               57.57687308907674 <- latitude  -> 57.73521446274954
59:36 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.828835339851558
59:36 DEBUG   opendrift.models.basemodel:1548:               -28.247400846370304   <- z ->   -0.023183511344966518
59:36 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:36 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 5 elements to seafloor.
59:36 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:36 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
59:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 0 0 2 0 0 0 0 2]
59:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 3 3 0 3 3 3 3 0]
59:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 392.   0.]
 [  0.   0.   0.   0.   0.]
 [ 78.   0.   0. 158.   0.]
 [  4.   0. 434.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:36 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:36 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.01934153880655376
59:36 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:36 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:36 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:36 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:36 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [139, 0, 243, 118, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:36 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:36 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:36 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:36 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:36 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:36 INFO    opendrift.models.basemodel:2882: 2023-08-23 07:28:56.855288 - step 36 of 96 - 500 active elements (0 deactivated)
59:36 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:36 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:36 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:36 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:36 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:36 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:36 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:36 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 07:00:00 (before)
                2023-08-23 08:00:00 (after)
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:38 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:38 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 42x27x7) for time after (2023-08-23 08:00:00)
59:38 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 07:00:00) in space  (linearNDFast)
59:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:38 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 08:00:00) in space  (linearNDFast)
59:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:38 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 07:00:00, weight 0.52) and
                      after (2023-08-23 08:00:00, weight 0.48) in time
59:38 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:38 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.164962960275666 degrees.
59:38 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.164962960275666 degrees.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:38 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:38 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:38 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:38 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:38 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:38 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:38 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0742916 (min) 0.226508 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.128443 (min) 0.128524 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.97122 (min) 3.88169 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.24579 (min) 2.93017 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.5702 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.603 (min) 17.2551 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4338 (min) 32.5114 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.00015546 (min) 0.000153574 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:38 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:38 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:38 DEBUG   opendrift.models.basemodel:1538:               57.5771930776867 <- latitude  -> 57.73559919601601
59:38 DEBUG   opendrift.models.basemodel:1543:               10.53490609443568 <- longitude -> 10.835048053024021
59:38 DEBUG   opendrift.models.basemodel:1548:               -29.461495945015812   <- z ->   -0.13981235792475816
59:38 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:38 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:38 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:38 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:38 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
59:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 0 0 2 0 0]
59:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 3 0 3 3]
59:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 398.   0.]
 [  0.   0.   0.   0.   0.]
 [ 81.   0.   0. 164.   0.]
 [  4.   0. 434.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:38 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:38 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.014842630703685142
59:38 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:38 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:38 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:38 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 233, 131, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:38 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:38 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:38 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:38 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:38 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:38 INFO    opendrift.models.basemodel:2882: 2023-08-23 07:58:56.855288 - step 37 of 96 - 500 active elements (0 deactivated)
59:38 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:38 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:38 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 07:00:00 (before)
                2023-08-23 08:00:00 (after)
59:38 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 07:00:00) in space  (linearNDFast)
59:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:38 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 08:00:00) in space  (linearNDFast)
59:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:38 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 07:00:00, weight 0.02) and
                      after (2023-08-23 08:00:00, weight 0.98) in time
59:38 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:38 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.15894201967543 degrees.
59:38 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.15894201967543 degrees.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:38 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:38 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:38 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:38 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:38 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:38 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:38 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:38 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:38 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:38 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:38 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0715544 (min) 0.205463 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.137187 (min) 0.120689 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.71398 (min) 3.60012 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.92057 (min) 4.40365 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.9254 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6042 (min) 17.2578 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3646 (min) 32.5242 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.00012643 (min) 0.000153445 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:38 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:38 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:38 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:38 DEBUG   opendrift.models.basemodel:1538:               57.5771930776867 <- latitude  -> 57.73583672583833
59:38 DEBUG   opendrift.models.basemodel:1543:               10.53490609443568 <- longitude -> 10.841068983384895
59:38 DEBUG   opendrift.models.basemodel:1548:               -28.805334979197283   <- z ->   -0.07449022850472342
59:38 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:38 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:38 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:38 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
59:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2]
59:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0]
59:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 400.   0.]
 [  0.   0.   0.   0.   0.]
 [ 83.   0.   0. 171.   0.]
 [  4.   0. 434.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:38 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:38 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02057864471293009
59:38 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:38 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:38 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:38 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 223, 141, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:38 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:38 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:38 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:38 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:38 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:38 INFO    opendrift.models.basemodel:2882: 2023-08-23 08:28:56.855288 - step 38 of 96 - 500 active elements (0 deactivated)
59:38 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:38 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:38 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:38 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:38 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:38 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:38 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:38 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 08:00:00 (before)
                2023-08-23 09:00:00 (after)
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:40 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:40 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 42x27x7) for time after (2023-08-23 09:00:00)
59:40 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 08:00:00) in space  (linearNDFast)
59:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:40 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 09:00:00) in space  (linearNDFast)
59:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:40 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 08:00:00, weight 0.52) and
                      after (2023-08-23 09:00:00, weight 0.48) in time
59:40 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:40 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.15276027776842 degrees.
59:40 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.15276027776842 degrees.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:40 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:40 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:40 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:40 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:40 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:40 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:40 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.100117 (min) 0.208749 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.134786 (min) 0.127409 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.89836 (min) 3.46048 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.67296 (min) 4.49199 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.8386 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.607 (min) 17.2721 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4235 (min) 32.5211 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000118686 (min) 0.000137032 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:40 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:40 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:40 DEBUG   opendrift.models.basemodel:1538:               57.5771930776867 <- latitude  -> 57.734676416290824
59:40 DEBUG   opendrift.models.basemodel:1543:               10.53490609443568 <- longitude -> 10.847250738499572
59:40 DEBUG   opendrift.models.basemodel:1548:               -29.972854428312584   <- z ->   0.0
59:40 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:40 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:40 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:40 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:40 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
59:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 0]
59:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 3]
59:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 403.   0.]
 [  0.   0.   0.   0.   0.]
 [ 86.   0.   0. 180.   0.]
 [  4.   0. 435.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:40 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:40 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02144253534780048
59:40 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:40 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:40 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:40 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 214, 150, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:40 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:40 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:40 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:40 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:40 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:40 INFO    opendrift.models.basemodel:2882: 2023-08-23 08:58:56.855288 - step 39 of 96 - 500 active elements (0 deactivated)
59:40 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:40 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:40 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 08:00:00 (before)
                2023-08-23 09:00:00 (after)
59:40 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 08:00:00) in space  (linearNDFast)
59:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:40 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 09:00:00) in space  (linearNDFast)
59:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:40 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 08:00:00, weight 0.02) and
                      after (2023-08-23 09:00:00, weight 0.98) in time
59:40 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:40 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.14679119046222 degrees.
59:40 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.14679119046222 degrees.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:40 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:40 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:40 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:40 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:40 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:40 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:40 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:40 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:40 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:40 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:40 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.0940407 (min) 0.189135 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.119587 (min) 0.144616 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.91074 (min) 3.62843 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.85202 (min) 4.94855 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.6343 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6099 (min) 17.3084 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2225 (min) 32.5181 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -8.79945e-05 (min) 0.00014624 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:40 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:40 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:40 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:40 DEBUG   opendrift.models.basemodel:1538:               57.57719307768671 <- latitude  -> 57.73296399352719
59:40 DEBUG   opendrift.models.basemodel:1543:               10.53490609443568 <- longitude -> 10.853219813736917
59:40 DEBUG   opendrift.models.basemodel:1548:               -26.856359725833325   <- z ->   -0.0868889947365466
59:40 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:40 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 4 elements to seafloor.
59:40 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:40 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
59:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 2 3 0 2 0 0]
59:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 0 3 0 3 3]
59:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 409.   0.]
 [  0.   0.   0.   0.   0.]
 [ 89.   0.   0. 186.   0.]
 [  5.   0. 435.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:40 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:40 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.024383719031131547
59:40 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:40 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:40 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:40 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:40 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:40 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:40 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [134, 0, 207, 159, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:40 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:40 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:40 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:40 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:40 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:40 INFO    opendrift.models.basemodel:2882: 2023-08-23 09:28:56.855288 - step 40 of 96 - 500 active elements (0 deactivated)
59:40 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:40 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:40 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:40 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:40 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:40 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:40 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:40 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 09:00:00 (before)
                2023-08-23 10:00:00 (after)
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:48 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:48 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 42x28x7) for time after (2023-08-23 10:00:00)
59:48 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 09:00:00) in space  (linearNDFast)
59:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:48 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 10:00:00) in space  (linearNDFast)
59:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:48 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 09:00:00, weight 0.52) and
                      after (2023-08-23 10:00:00, weight 0.48) in time
59:48 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:48 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.1421106918214 degrees.
59:48 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.1421106918214 degrees.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:48 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:48 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:48 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:48 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:48 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:48 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:48 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.110825 (min) 0.186665 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.112479 (min) 0.160178 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.26694 (min) 3.67116 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.18577 (min) 4.07967 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.3591 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6141 (min) 17.2883 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4679 (min) 32.5156 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.50263e-05 (min) 0.000111007 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:48 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:48 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:48 DEBUG   opendrift.models.basemodel:1538:               57.57719307768671 <- latitude  -> 57.73104878156752
59:48 DEBUG   opendrift.models.basemodel:1543:               10.53490609443568 <- longitude -> 10.857900307760747
59:48 DEBUG   opendrift.models.basemodel:1548:               -28.838166512049078   <- z ->   -0.12409414653187434
59:48 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:48 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:48 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:48 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:48 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:48 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:48 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:48 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
59:48 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0]
59:48 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3]
59:48 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 414.   0.]
 [  0.   0.   0.   0.   0.]
 [ 90.   0.   0. 191.   0.]
 [  5.   0. 436.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:48 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:48 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:48 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.020728473805921875
59:48 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:48 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:48 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:48 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:48 INFO    opendrift.models.chemicaldrift:1861: partitioning: [130, 0, 199, 171, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:48 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:48 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:48 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:48 INFO    opendrift.models.basemodel:2882: 2023-08-23 09:58:56.855288 - step 41 of 96 - 500 active elements (0 deactivated)
59:48 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:48 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:48 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 09:00:00 (before)
                2023-08-23 10:00:00 (after)
59:48 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 09:00:00) in space  (linearNDFast)
59:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:48 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 10:00:00) in space  (linearNDFast)
59:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:48 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 09:00:00, weight 0.02) and
                      after (2023-08-23 10:00:00, weight 0.98) in time
59:48 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:48 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.13734967435305 degrees.
59:48 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.13734967435305 degrees.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:48 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:48 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:48 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:48 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:48 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:48 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:48 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:48 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:48 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:48 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:48 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.127621 (min) 0.199864 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.145437 (min) 0.181938 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.38795 (min) 4.1009 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.94723 (min) 3.69156 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 33.6856 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6184 (min) 17.3371 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2206 (min) 32.5309 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -8.60895e-05 (min) 0.000179467 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:48 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:48 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:48 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:48 DEBUG   opendrift.models.basemodel:1538:               57.57719307768671 <- latitude  -> 57.72973875308783
59:48 DEBUG   opendrift.models.basemodel:1543:               10.534906094435685 <- longitude -> 10.862661335155506
59:48 DEBUG   opendrift.models.basemodel:1548:               -30.205648792451388   <- z ->   -0.19928723776786506
59:48 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:48 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 6 elements to seafloor.
59:48 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:48 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:48 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:48 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:48 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:48 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 0 2 0]
59:48 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 3 0 3]
59:48 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 417.   0.]
 [  0.   0.   0.   0.   0.]
 [ 94.   0.   0. 198.   0.]
 [  5.   0. 436.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:48 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:48 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:48 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.020586161057306242
59:48 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:48 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:48 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:48 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:48 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:48 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:48 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:48 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:48 INFO    opendrift.models.chemicaldrift:1861: partitioning: [131, 0, 190, 179, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:48 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:48 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:48 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:48 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:48 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:48 INFO    opendrift.models.basemodel:2882: 2023-08-23 10:28:56.855288 - step 42 of 96 - 500 active elements (0 deactivated)
59:48 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:48 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:48 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:48 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:48 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:48 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:48 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:48 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 10:00:00 (before)
                2023-08-23 11:00:00 (after)
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:49 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:49 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 43x28x7) for time after (2023-08-23 11:00:00)
59:49 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 10:00:00) in space  (linearNDFast)
59:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:49 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 11:00:00) in space  (linearNDFast)
59:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:49 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 10:00:00, weight 0.52) and
                      after (2023-08-23 11:00:00, weight 0.48) in time
59:49 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:49 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.13310309794993 degrees.
59:49 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.13310309794993 degrees.
59:49 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:49 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:49 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:49 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:49 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:49 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:49 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:49 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:49 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:49 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:49 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:49 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:49 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:49 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:49 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:49 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:49 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:49 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:49 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:49 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:49 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:49 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.130334 (min) 0.204386 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.145171 (min) 0.190009 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.76458 (min) 3.74281 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.76558 (min) 3.46317 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 34.475 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6193 (min) 17.3542 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2228 (min) 32.5348 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -6.95422e-05 (min) 0.00018333 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:49 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:49 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:49 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:49 DEBUG   opendrift.models.basemodel:1538:               57.57719307768671 <- latitude  -> 57.730128780674846
59:49 DEBUG   opendrift.models.basemodel:1543:               10.534906094435685 <- longitude -> 10.866907906601188
59:49 DEBUG   opendrift.models.basemodel:1548:               -29.70263597391808   <- z ->   -0.18240388489577625
59:49 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:49 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:49 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:50 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:50 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
59:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 0 0]
59:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 3 3]
59:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 421.   0.]
 [  0.   0.   0.   0.   0.]
 [ 96.   0.   0. 204.   0.]
 [  5.   0. 437.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:50 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:50 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.017772995299491213
59:50 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:50 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:50 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:50 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:50 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:50 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 187, 184, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:50 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:50 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:50 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:50 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:50 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:50 INFO    opendrift.models.basemodel:2882: 2023-08-23 10:58:56.855288 - step 43 of 96 - 500 active elements (0 deactivated)
59:50 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:50 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:50 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:50 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:50 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:50 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:50 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 10:00:00 (before)
                2023-08-23 11:00:00 (after)
59:50 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 10:00:00) in space  (linearNDFast)
59:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:50 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 11:00:00) in space  (linearNDFast)
59:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:50 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 10:00:00, weight 0.02) and
                      after (2023-08-23 11:00:00, weight 0.98) in time
59:50 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:50 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.12874231226269 degrees.
59:50 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.12874231226269 degrees.
59:50 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:50 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:50 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:50 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:50 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:50 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:50 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:50 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:50 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:50 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:50 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:50 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:50 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:50 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:50 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:50 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:50 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:50 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:50 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:50 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:50 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.135928 (min) 0.212725 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.146049 (min) 0.215003 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     x_wind: 1.75629 (min) 3.57926 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.62236 (min) 3.21405 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 35.0742 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.62 (min) 17.3703 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2281 (min) 32.5377 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.4916e-05 (min) 0.000182318 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:50 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:50 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:50 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:50 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.73280597283018
59:50 DEBUG   opendrift.models.basemodel:1543:               10.53490609443569 <- longitude -> 10.871268692380676
59:50 DEBUG   opendrift.models.basemodel:1548:               -30.144689122961356   <- z ->   -0.2667521723828109
59:50 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:50 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:50 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:50 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
59:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2 0 0]
59:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0 3 3]
59:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 427.   0.]
 [  0.   0.   0.   0.   0.]
 [ 98.   0.   0. 205.   0.]
 [  5.   0. 437.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:50 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:50 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.015175777045882893
59:50 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:50 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:50 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:50 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:50 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:50 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:50 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:50 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:50 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:50 INFO    opendrift.models.chemicaldrift:1861: partitioning: [125, 0, 177, 198, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:50 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:50 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:50 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:50 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:50 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:50 INFO    opendrift.models.basemodel:2882: 2023-08-23 11:28:56.855288 - step 44 of 96 - 500 active elements (0 deactivated)
59:50 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:50 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:50 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:50 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:50 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:50 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:50 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:50 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 11:00:00 (before)
                2023-08-23 12:00:00 (after)
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:51 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:51 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 44x29x7) for time after (2023-08-23 12:00:00)
59:51 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 11:00:00) in space  (linearNDFast)
59:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:51 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 12:00:00) in space  (linearNDFast)
59:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:51 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 11:00:00, weight 0.52) and
                      after (2023-08-23 12:00:00, weight 0.48) in time
59:51 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:51 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.1246273583646 degrees.
59:51 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.1246273583646 degrees.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:51 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:51 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:51 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:51 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:51 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:51 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:51 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.134543 (min) 0.223772 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.13901 (min) 0.23898 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.01474 (min) 4.17705 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.11643 (min) 2.85601 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 35.7208 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6248 (min) 17.3902 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.298 (min) 32.5411 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.72785e-05 (min) 0.000180504 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:51 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:51 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:51 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.73566633300375
59:51 DEBUG   opendrift.models.basemodel:1543:               10.53490609443569 <- longitude -> 10.8753836323285
59:51 DEBUG   opendrift.models.basemodel:1548:               -30.631694032251804   <- z ->   -0.08238945552998989
59:51 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:51 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:51 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:51 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:51 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 2 0 2]
59:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0 3 0]
59:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 430.   0.]
 [  0.   0.   0.   0.   0.]
 [102.   0.   0. 213.   0.]
 [  5.   0. 437.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:51 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:51 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.01397002160360249
59:51 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:51 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:51 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [126, 0, 171, 203, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:51 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:51 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:51 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:51 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:51 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:51 INFO    opendrift.models.basemodel:2882: 2023-08-23 11:58:56.855288 - step 45 of 96 - 500 active elements (0 deactivated)
59:51 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:51 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:51 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 11:00:00 (before)
                2023-08-23 12:00:00 (after)
59:51 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 11:00:00) in space  (linearNDFast)
59:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:51 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 12:00:00) in space  (linearNDFast)
59:51 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:51 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 11:00:00, weight 0.02) and
                      after (2023-08-23 12:00:00, weight 0.98) in time
59:51 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:51 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.120148477869584 degrees.
59:51 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.120148477869584 degrees.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:51 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:51 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:51 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:51 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:51 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:51 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:51 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:51 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:51 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:51 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:51 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.136578 (min) 0.233238 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.122705 (min) 0.243471 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     x_wind: 1.19479 (min) 6.05683 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.497741 (min) 2.5225 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 36.6582 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6298 (min) 17.4166 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2978 (min) 32.5387 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.84265e-05 (min) 0.000159143 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:51 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:51 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:51 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:51 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.739528555328434
59:51 DEBUG   opendrift.models.basemodel:1543:               10.534906094435687 <- longitude -> 10.879862517705673
59:51 DEBUG   opendrift.models.basemodel:1548:               -31.33519058559402   <- z ->   -0.3147071733132841
59:51 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:51 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 6 elements to seafloor.
59:51 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:51 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
59:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0 0]
59:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3 3]
59:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 434.   0.]
 [  0.   0.   0.   0.   0.]
 [104.   0.   0. 216.   0.]
 [  5.   0. 438.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:51 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:51 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.02703591004109546
59:51 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:51 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:51 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:51 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [124, 0, 162, 214, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:51 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:51 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:51 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:51 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:51 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:51 INFO    opendrift.models.basemodel:2882: 2023-08-23 12:28:56.855288 - step 46 of 96 - 500 active elements (0 deactivated)
59:51 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:51 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:51 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:51 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:51 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:51 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:51 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:51 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 12:00:00 (before)
                2023-08-23 13:00:00 (after)
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:53 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:53 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 45x29x7) for time after (2023-08-23 13:00:00)
59:53 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 12:00:00) in space  (linearNDFast)
59:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:53 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 13:00:00) in space  (linearNDFast)
59:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:53 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 12:00:00, weight 0.52) and
                      after (2023-08-23 13:00:00, weight 0.48) in time
59:53 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:53 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11629311350486 degrees.
59:53 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11629311350486 degrees.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:53 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:53 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:53 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:53 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:53 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:53 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:53 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.159336 (min) 0.266138 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.129905 (min) 0.258119 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     x_wind: 2.33818 (min) 6.24557 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.193573 (min) 1.83212 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 37.7724 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6324 (min) 17.4459 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3388 (min) 32.5503 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -8.12831e-05 (min) 0.000179249 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:53 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:53 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:53 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.743242145493284
59:53 DEBUG   opendrift.models.basemodel:1543:               10.534906094435684 <- longitude -> 10.883717892720131
59:53 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.3022689776473122
59:53 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:53 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:53 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:53 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:53 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
59:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0]
59:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3]
59:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 437.   0.]
 [  0.   0.   0.   0.   0.]
 [105.   0.   0. 223.   0.]
 [  5.   0. 438.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:53 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:53 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.028285499645787467
59:53 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:53 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:53 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:53 DEBUG   opendrift.models.oceandrift:582: 1 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:53 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:53 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [122, 0, 160, 218, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:53 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:53 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:53 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:53 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:53 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:53 INFO    opendrift.models.basemodel:2882: 2023-08-23 12:58:56.855288 - step 47 of 96 - 500 active elements (0 deactivated)
59:53 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:53 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:53 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 12:00:00 (before)
                2023-08-23 13:00:00 (after)
59:53 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 12:00:00) in space  (linearNDFast)
59:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:53 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 13:00:00) in space  (linearNDFast)
59:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:53 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 12:00:00, weight 0.02) and
                      after (2023-08-23 13:00:00, weight 0.98) in time
59:53 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:53 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11504628931275 degrees.
59:53 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11504628931275 degrees.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:53 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:53 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:53 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:53 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:53 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:53 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:53 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:53 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:53 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:53 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:53 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.175892 (min) 0.254019 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.12598 (min) 0.251749 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     x_wind: 3.06355 (min) 6.43094 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.947558 (min) 1.16514 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 39.0351 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6349 (min) 17.482 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3427 (min) 32.5562 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -8.25635e-05 (min) 0.000216962 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:53 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:53 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:53 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:53 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.74741363742233
59:53 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.884964712246518
59:53 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.5833434876395096
59:53 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:53 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:53 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:53 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:53 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
59:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0]
59:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3]
59:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 440.   0.]
 [  0.   0.   0.   0.   0.]
 [107.   0.   0. 225.   0.]
 [  5.   0. 439.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:53 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:53 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.03010047262856621
59:53 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:53 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:53 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:53 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:53 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [121, 0, 156, 223, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:53 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:53 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:53 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:53 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:53 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:53 INFO    opendrift.models.basemodel:2882: 2023-08-23 13:28:56.855288 - step 48 of 96 - 500 active elements (0 deactivated)
59:53 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:53 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:53 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:53 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:53 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:53 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:53 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:53 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 13:00:00 (before)
                2023-08-23 14:00:00 (after)
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:54 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:54 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 46x30x7) for time after (2023-08-23 14:00:00)
59:54 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 13:00:00) in space  (linearNDFast)
59:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:54 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 14:00:00) in space  (linearNDFast)
59:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:54 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 13:00:00, weight 0.52) and
                      after (2023-08-23 14:00:00, weight 0.48) in time
59:54 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:54 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11228156100672 degrees.
59:54 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.11228156100672 degrees.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:54 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:54 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:54 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:54 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:54 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:54 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:54 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.18884 (min) 0.274457 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.124649 (min) 0.251302 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     x_wind: 4.32293 (min) 6.94572 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.963315 (min) 1.298 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 40.1075 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6381 (min) 17.5118 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4388 (min) 32.5966 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.72985e-05 (min) 0.000248285 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:54 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:54 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:54 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75095597631183
59:54 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.887729433048873
59:54 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.0346155059475195
59:54 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:54 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:54 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:54 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:54 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
59:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0]
59:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3]
59:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 442.   0.]
 [  0.   0.   0.   0.   0.]
 [109.   0.   0. 227.   0.]
 [  5.   0. 439.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:54 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:54 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.034876948843786844
59:54 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:54 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:54 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:54 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:54 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [121, 0, 152, 227, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:54 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:54 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:54 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:54 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:54 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:54 INFO    opendrift.models.basemodel:2882: 2023-08-23 13:58:56.855288 - step 49 of 96 - 500 active elements (0 deactivated)
59:54 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:54 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:54 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 13:00:00 (before)
                2023-08-23 14:00:00 (after)
59:54 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 13:00:00) in space  (linearNDFast)
59:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:54 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 14:00:00) in space  (linearNDFast)
59:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:54 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 13:00:00, weight 0.02) and
                      after (2023-08-23 14:00:00, weight 0.98) in time
59:54 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:54 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.10520417022254 degrees.
59:54 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.10520417022254 degrees.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:54 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:54 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:54 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:54 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:54 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:54 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:54 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:54 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:54 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:54 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:54 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.181315 (min) 0.289742 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.123195 (min) 0.22124 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     x_wind: 5.57402 (min) 7.54081 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     y_wind: -1.32407 (min) 1.48654 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.3518 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6413 (min) 17.5429 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.2487 (min) 32.6035 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -8.23719e-05 (min) 0.000279578 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:54 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:54 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:54 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:54 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.75501721757273
59:54 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.894806835924635
59:54 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.3042569322129334
59:54 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:54 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:54 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
59:54 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:54 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
59:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 3 0 0]
59:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3]
59:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 446.   0.]
 [  0.   0.   0.   0.   0.]
 [109.   0.   0. 229.   0.]
 [  6.   0. 439.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:54 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:54 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04120785732676919
59:54 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:54 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:54 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:54 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:54 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:54 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:54 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [118, 0, 150, 232, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:54 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:54 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:54 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:54 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:54 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:54 INFO    opendrift.models.basemodel:2882: 2023-08-23 14:28:56.855288 - step 50 of 96 - 500 active elements (0 deactivated)
59:54 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:54 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:54 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:54 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:54 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:54 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:54 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:54 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 14:00:00 (before)
                2023-08-23 15:00:00 (after)
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:56 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:56 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 47x30x7) for time after (2023-08-23 15:00:00)
59:56 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 14:00:00) in space  (linearNDFast)
59:56 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:56 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 15:00:00) in space  (linearNDFast)
59:56 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:56 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 14:00:00, weight 0.52) and
                      after (2023-08-23 15:00:00, weight 0.48) in time
59:56 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:56 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.097154715028914 degrees.
59:56 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.097154715028914 degrees.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:56 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:56 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:56 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:56 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:56 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:56 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:56 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.163058 (min) 0.339987 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.120061 (min) 0.210036 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.00963 (min) 7.99459 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.966544 (min) 1.30654 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.1965 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6456 (min) 17.5521 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.1897 (min) 32.7403 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -6.33338e-05 (min) 0.000276726 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:56 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:56 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:56 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.757773768136204
59:56 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.90285629017346
59:56 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.13225032950367654
59:56 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:56 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:56 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:56 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:56 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:56 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:56 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:56 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
59:56 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
59:56 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
59:56 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 446.   0.]
 [  0.   0.   0.   0.   0.]
 [110.   0.   0. 231.   0.]
 [  6.   0. 439.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:56 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:56 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:56 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:56 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:56 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.046522022244896315
59:56 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:56 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:56 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:56 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:56 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:56 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:56 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:56 INFO    opendrift.models.chemicaldrift:1861: partitioning: [119, 0, 148, 233, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:56 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:56 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:56 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:56 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:56 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:56 INFO    opendrift.models.basemodel:2882: 2023-08-23 14:58:56.855288 - step 51 of 96 - 500 active elements (0 deactivated)
59:56 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:56 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:56 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 14:00:00 (before)
                2023-08-23 15:00:00 (after)
59:56 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 14:00:00) in space  (linearNDFast)
59:56 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:56 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 15:00:00) in space  (linearNDFast)
59:56 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:56 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 14:00:00, weight 0.02) and
                      after (2023-08-23 15:00:00, weight 0.98) in time
59:56 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:56 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.088586164833885 degrees.
59:56 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.088586164833885 degrees.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:56 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:56 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:56 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:56 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:56 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:56 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:56 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:56 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:56 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:56 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:56 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:56 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.154791 (min) 0.318829 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.125793 (min) 0.181236 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.33158 (min) 8.45615 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.594084 (min) 1.51023 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 43.224 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6498 (min) 17.4861 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3091 (min) 32.6806 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.80707e-05 (min) 0.000290544 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:56 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:56 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:56 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:56 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.76116792684467
59:56 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.911424828917838
59:56 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   0.0
59:56 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:56 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:56 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:56 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:56 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:56 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:56 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:56 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
59:56 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 2 0]
59:56 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 0 3]
59:56 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 454.   0.]
 [  0.   0.   0.   0.   0.]
 [111.   0.   0. 233.   0.]
 [  6.   0. 440.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:56 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:56 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:56 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:56 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:56 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.05231712728936712
59:56 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:56 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:56 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:56 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:56 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:56 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
59:56 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:56 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
59:56 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:56 INFO    opendrift.models.chemicaldrift:1861: partitioning: [112, 0, 145, 243, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:56 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:56 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:56 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:56 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:56 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:56 INFO    opendrift.models.basemodel:2882: 2023-08-23 15:28:56.855288 - step 52 of 96 - 500 active elements (0 deactivated)
59:56 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:56 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:56 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:56 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:56 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:56 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:56 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:56 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 15:00:00 (before)
                2023-08-23 16:00:00 (after)
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:57 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:57 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 48x31x7) for time after (2023-08-23 16:00:00)
59:57 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 15:00:00) in space  (linearNDFast)
59:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:57 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 16:00:00) in space  (linearNDFast)
59:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:57 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 15:00:00, weight 0.52) and
                      after (2023-08-23 16:00:00, weight 0.48) in time
59:57 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:57 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.078949368941245 degrees.
59:57 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.078949368941245 degrees.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:57 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:57 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:57 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:57 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:57 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:57 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:57 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.147004 (min) 0.310848 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.116337 (min) 0.158868 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.48716 (min) 8.44355 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     y_wind: -0.014009 (min) 1.93086 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 43.3991 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6524 (min) 17.5319 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.214 (min) 32.6996 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -3.44935e-05 (min) 0.000287684 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:57 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:57 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:57 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.761744304169184
59:57 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.921061627254879
59:57 DEBUG   opendrift.models.basemodel:1548:               -31.947533629463784   <- z ->   -0.29845514596359257
59:57 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:57 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:57 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:57 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:57 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 0 0 2 0 0]
59:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 3 3]
59:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 459.   0.]
 [  0.   0.   0.   0.   0.]
 [112.   0.   0. 237.   0.]
 [  7.   0. 442.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:57 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:57 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.05318909737661178
59:57 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:57 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:57 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [109, 0, 139, 252, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:57 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:57 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:57 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:57 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:57 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:57 INFO    opendrift.models.basemodel:2882: 2023-08-23 15:58:56.855288 - step 53 of 96 - 500 active elements (0 deactivated)
59:57 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:57 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:57 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 15:00:00 (before)
                2023-08-23 16:00:00 (after)
59:57 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 15:00:00) in space  (linearNDFast)
59:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:57 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 16:00:00) in space  (linearNDFast)
59:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:57 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 15:00:00, weight 0.02) and
                      after (2023-08-23 16:00:00, weight 0.98) in time
59:57 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:57 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.06955337017123 degrees.
59:57 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.06955337017123 degrees.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:57 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:57 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:57 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:57 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:57 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:57 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:57 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:57 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:57 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:57 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:57 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.14231 (min) 0.389687 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.110999 (min) 0.155477 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.63893 (min) 8.44135 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     y_wind: 0.579856 (min) 2.31524 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 43.679 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6549 (min) 17.4605 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3417 (min) 32.6733 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -3.53127e-05 (min) 0.000256574 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:57 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:57 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:57 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:57 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.76271215529653
59:57 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.93045762220001
59:57 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   -0.32403643992737363
59:57 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:57 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 5 elements to seafloor.
59:57 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:57 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
59:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 2 0 0]
59:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 0 3 3]
59:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 464.   0.]
 [  0.   0.   0.   0.   0.]
 [114.   0.   0. 242.   0.]
 [  7.   0. 442.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:57 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:57 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.05451388396441315
59:57 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:57 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:57 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:57 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:57 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:57 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
59:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [106, 0, 134, 260, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:57 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:57 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:57 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:57 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:57 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:57 INFO    opendrift.models.basemodel:2882: 2023-08-23 16:28:56.855288 - step 54 of 96 - 500 active elements (0 deactivated)
59:57 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:57 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:57 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:57 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:57 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:57 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:57 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:57 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 16:00:00 (before)
                2023-08-23 17:00:00 (after)
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
59:59 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
59:59 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 48x31x7) for time after (2023-08-23 17:00:00)
59:59 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 16:00:00) in space  (linearNDFast)
59:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:59 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 17:00:00) in space  (linearNDFast)
59:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:59 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 16:00:00, weight 0.52) and
                      after (2023-08-23 17:00:00, weight 0.48) in time
59:59 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:59 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.05879268107024 degrees.
59:59 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.05879268107024 degrees.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:59 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:59 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:59 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:59 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:59 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:59 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:59 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.131041 (min) 0.375168 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.106457 (min) 0.126326 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.83064 (min) 7.85709 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.77381 (min) 2.80749 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 43.452 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6557 (min) 17.4697 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.273 (min) 32.6866 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -7.51726e-06 (min) 0.000246947 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:59 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:59 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:59 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.76198298250647
59:59 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.94121830008029
59:59 DEBUG   opendrift.models.basemodel:1548:               -31.431394577026367   <- z ->   0.0
59:59 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:59 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:59 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:59 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:59 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
59:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 2 0]
59:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 0 3]
59:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 470.   0.]
 [  0.   0.   0.   0.   0.]
 [116.   0.   0. 245.   0.]
 [  7.   0. 442.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:59 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:59 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04995559356356104
59:59 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:59 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:59 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [102, 0, 127, 271, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:59 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:59 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:59 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:59 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:59 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:59 INFO    opendrift.models.basemodel:2882: 2023-08-23 16:58:56.855288 - step 55 of 96 - 500 active elements (0 deactivated)
59:59 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:59 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:59 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 16:00:00 (before)
                2023-08-23 17:00:00 (after)
59:59 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 16:00:00) in space  (linearNDFast)
59:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:59 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 17:00:00) in space  (linearNDFast)
59:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
59:59 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 16:00:00, weight 0.02) and
                      after (2023-08-23 17:00:00, weight 0.98) in time
59:59 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
59:59 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.051603965484034 degrees.
59:59 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.051603965484034 degrees.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
59:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:59 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
59:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
59:59 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
59:59 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
59:59 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
59:59 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
59:59 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
59:59 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
59:59 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
59:59 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
59:59 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
59:59 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.134734 (min) 0.357726 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.113853 (min) 0.127817 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.73849 (min) 7.60963 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.52423 (min) 3.32827 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.9751 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6564 (min) 17.4477 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4617 (min) 32.6907 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.63339e-06 (min) 0.000238051 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
59:59 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
59:59 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
59:59 DEBUG   opendrift.models.basemodel:1527:               500 active elements
59:59 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.760423871652215
59:59 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.948407022176607
59:59 DEBUG   opendrift.models.basemodel:1548:               -33.068783844396016   <- z ->   -0.30504928575285706
59:59 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
59:59 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 6 elements to seafloor.
59:59 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
59:59 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
59:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
59:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
59:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
59:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2]
59:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0]
59:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 472.   0.]
 [  0.   0.   0.   0.   0.]
 [118.   0.   0. 251.   0.]
 [  7.   0. 443.   0.   0.]
 [  0.   0.   0.   0.   0.]]
59:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
59:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
59:59 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
59:59 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04968494867869687
59:59 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
59:59 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
59:59 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
59:59 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
59:59 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
59:59 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
59:59 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
59:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
59:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
59:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
59:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
59:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [102, 0, 122, 276, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
59:59 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
59:59 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
59:59 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
59:59 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
59:59 DEBUG   opendrift.models.basemodel:2881: ======================================================================
59:59 INFO    opendrift.models.basemodel:2882: 2023-08-23 17:28:56.855288 - step 56 of 96 - 500 active elements (0 deactivated)
59:59 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
59:59 DEBUG   opendrift.models.basemodel:2890: ======================================================================
59:59 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
59:59 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:59 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
59:59 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
59:59 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
59:59 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 17:00:00 (before)
                2023-08-23 18:00:00 (after)
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:00 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:00 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 49x32x7) for time after (2023-08-23 18:00:00)
00:00 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 17:00:00) in space  (linearNDFast)
00:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:00 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 18:00:00) in space  (linearNDFast)
00:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:00 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 17:00:00, weight 0.52) and
                      after (2023-08-23 18:00:00, weight 0.48) in time
00:00 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:00 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.049928752930676 degrees.
00:00 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.465104981249766 and -59.049928752930676 degrees.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:00 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:00 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:00 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:00 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:00 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:00 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:00 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.137632 (min) 0.330039 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.122197 (min) 0.12453 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.82244 (min) 7.27466 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.55071 (min) 3.46266 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.4891 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6582 (min) 17.4132 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3118 (min) 32.7171 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: 1.38677e-06 (min) 0.000251605 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:00 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:00 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:00 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.758823513957616
00:00 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.950082241718459
00:00 DEBUG   opendrift.models.basemodel:1548:               -35.50245587715536   <- z ->   0.0
00:00 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:00 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:00 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:00 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:00 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
00:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2]
00:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0]
00:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 473.   0.]
 [  0.   0.   0.   0.   0.]
 [119.   0.   0. 255.   0.]
 [  7.   0. 444.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:00 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:00 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.046750739414489845
00:00 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:00 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:00 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:00 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
00:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
00:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [102, 0, 121, 277, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:00 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:00 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:00 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:00 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:00 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:00 INFO    opendrift.models.basemodel:2882: 2023-08-23 17:58:56.855288 - step 57 of 96 - 500 active elements (0 deactivated)
00:00 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:00 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:00 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 17:00:00 (before)
                2023-08-23 18:00:00 (after)
00:00 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 17:00:00) in space  (linearNDFast)
00:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:00 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 18:00:00) in space  (linearNDFast)
00:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:00 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 17:00:00, weight 0.02) and
                      after (2023-08-23 18:00:00, weight 0.98) in time
00:00 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:00 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.048017595186195 degrees.
00:00 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.048017595186195 degrees.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:00 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:00 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:00 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:00 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:00 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:00 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:00 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:00 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:00 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:00 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:00 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.136194 (min) 0.375999 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.129978 (min) 0.121302 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.81038 (min) 7.33849 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.56003 (min) 3.68297 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.2031 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6599 (min) 17.4024 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.4705 (min) 32.7206 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: 5.37552e-06 (min) 0.000218831 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:00 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:00 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:00 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:00 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.75787307932699
00:00 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.951993388664018
00:00 DEBUG   opendrift.models.basemodel:1548:               -36.31794039117954   <- z ->   0.0
00:00 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:00 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:00 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:00 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:00 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
00:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0]
00:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3]
00:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 477.   0.]
 [  0.   0.   0.   0.   0.]
 [119.   0.   0. 256.   0.]
 [  7.   0. 445.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:00 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:00 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.04561884291186247
00:00 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:00 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:00 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:00 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
00:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
00:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [98, 0, 122, 280, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:00 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:00 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:00 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:00 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:00 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:00 INFO    opendrift.models.basemodel:2882: 2023-08-23 18:28:56.855288 - step 58 of 96 - 500 active elements (0 deactivated)
00:00 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:00 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:00 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:00 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:00 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:00 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:00 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:00 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 18:00:00 (before)
                2023-08-23 19:00:00 (after)
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:02 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:02 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 49x32x7) for time after (2023-08-23 19:00:00)
00:02 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 18:00:00) in space  (linearNDFast)
00:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:02 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 19:00:00) in space  (linearNDFast)
00:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:02 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 18:00:00, weight 0.52) and
                      after (2023-08-23 19:00:00, weight 0.48) in time
00:02 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:02 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.04527860370944 degrees.
00:02 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.04527860370944 degrees.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:02 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:02 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:02 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:02 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:02 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:02 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:02 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.158424 (min) 0.365057 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.149887 (min) 0.123139 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.20991 (min) 7.71184 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.90146 (min) 3.63316 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.1169 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6593 (min) 17.3801 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.3453 (min) 32.7152 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -2.20453e-05 (min) 0.000214317 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:02 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:02 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:02 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75757932061713
00:02 DEBUG   opendrift.models.basemodel:1543:               10.534906094435685 <- longitude -> 10.954732392956776
00:02 DEBUG   opendrift.models.basemodel:1548:               -36.306068420410156   <- z ->   -0.06771939031851834
00:02 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:02 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:02 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:02 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:02 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
00:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
00:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
00:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 477.   0.]
 [  0.   0.   0.   0.   0.]
 [124.   0.   0. 256.   0.]
 [  7.   0. 446.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:02 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:02 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.05050227081169144
00:02 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:02 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:02 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:02 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:02 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:02 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:02 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:02 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
00:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [103, 0, 114, 283, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:02 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:02 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:02 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:02 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:02 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:02 INFO    opendrift.models.basemodel:2882: 2023-08-23 18:58:56.855288 - step 59 of 96 - 500 active elements (0 deactivated)
00:02 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:02 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:02 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 18:00:00 (before)
                2023-08-23 19:00:00 (after)
00:02 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 18:00:00) in space  (linearNDFast)
00:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:02 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 19:00:00) in space  (linearNDFast)
00:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:02 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 18:00:00, weight 0.02) and
                      after (2023-08-23 19:00:00, weight 0.98) in time
00:02 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:02 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.04177699166405 degrees.
00:02 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.04177699166405 degrees.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:02 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:02 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:02 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:02 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:02 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:02 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:02 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:02 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:02 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:02 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:02 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.159141 (min) 0.303156 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.168478 (min) 0.0957858 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.49443 (min) 8.1579 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.15425 (min) 3.6311 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 42.0101 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6586 (min) 17.3227 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.5478 (min) 32.7671 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -5.53868e-05 (min) 0.00020611 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:02 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:02 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:02 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:02 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75702569324545
00:02 DEBUG   opendrift.models.basemodel:1543:               10.534906094435685 <- longitude -> 10.958233988751116
00:02 DEBUG   opendrift.models.basemodel:1548:               -36.306068420410156   <- z ->   0.0
00:02 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:02 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:02 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:02 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:02 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
00:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0 0]
00:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 3]
00:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 481.   0.]
 [  0.   0.   0.   0.   0.]
 [126.   0.   0. 259.   0.]
 [  7.   0. 446.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:02 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:02 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.05751381269811857
00:02 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:02 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:02 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 2 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:02 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:02 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:02 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
00:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
00:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [101, 0, 116, 283, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:02 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:02 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:02 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:02 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:02 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:02 INFO    opendrift.models.basemodel:2882: 2023-08-23 19:28:56.855288 - step 60 of 96 - 500 active elements (0 deactivated)
00:02 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:02 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:02 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:02 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:02 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:02 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:02 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:02 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 19:00:00 (before)
                2023-08-23 20:00:00 (after)
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:03 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:03 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 50x33x7) for time after (2023-08-23 20:00:00)
00:03 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 19:00:00) in space  (linearNDFast)
00:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:03 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 20:00:00) in space  (linearNDFast)
00:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:03 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 19:00:00, weight 0.52) and
                      after (2023-08-23 20:00:00, weight 0.48) in time
00:03 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:03 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.032612908911354 degrees.
00:03 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.032612908911354 degrees.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:03 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:03 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:03 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:03 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:03 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:03 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:03 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.16187 (min) 0.261381 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.178143 (min) 0.0881384 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.56269 (min) 8.59385 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.13438 (min) 3.50325 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.8612 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6586 (min) 17.2971 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.8247 (min) 32.7676 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -9.30526e-05 (min) 0.000191445 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:03 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:03 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:03 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75626816561264
00:03 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.967398079738691
00:03 DEBUG   opendrift.models.basemodel:1548:               -35.124274749858856   <- z ->   -0.035552592938817074
00:03 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:03 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:03 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:03 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:03 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
00:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 0 0 2 3 0]
00:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 0 3]
00:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 485.   0.]
 [  0.   0.   0.   0.   0.]
 [127.   0.   0. 260.   0.]
 [  9.   0. 451.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:03 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:03 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.061997515119809124
00:03 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:03 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:03 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:03 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:03 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:03 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
00:03 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:03 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 21 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:03 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:03 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
00:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [100, 0, 111, 289, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:03 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:03 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:03 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:03 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:03 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:03 INFO    opendrift.models.basemodel:2882: 2023-08-23 19:58:56.855288 - step 61 of 96 - 500 active elements (0 deactivated)
00:03 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:03 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:03 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 19:00:00 (before)
                2023-08-23 20:00:00 (after)
00:03 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 19:00:00) in space  (linearNDFast)
00:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:03 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 20:00:00) in space  (linearNDFast)
00:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:03 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 19:00:00, weight 0.02) and
                      after (2023-08-23 20:00:00, weight 0.98) in time
00:03 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:03 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.030788427318186 degrees.
00:03 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.030788427318186 degrees.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:03 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:03 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:03 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:03 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:03 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:03 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:03 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:03 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:03 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:03 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:03 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.16808 (min) 0.255407 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.192056 (min) 0.084284 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.62363 (min) 9.16031 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     y_wind: 3.06174 (min) 3.41677 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.7171 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6586 (min) 17.2529 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.9484 (min) 32.7267 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000107513 (min) 0.000180625 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:03 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:03 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:03 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:03 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75554110395136
00:03 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.969222559317014
00:03 DEBUG   opendrift.models.basemodel:1548:               -32.393238194759824   <- z ->   0.0
00:03 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:03 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:03 DEBUG   opendrift.models.basemodel:836: Lifting 4 elements to seafloor.
00:03 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:03 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
00:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0]
00:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3]
00:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 486.   0.]
 [  0.   0.   0.   0.   0.]
 [127.   0.   0. 264.   0.]
 [  9.   0. 451.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:03 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:03 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.06823307300208169
00:03 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:03 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:03 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:03 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:03 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:03 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:03 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
00:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
00:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [99, 0, 114, 287, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:03 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:03 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:03 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:03 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:03 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:03 INFO    opendrift.models.basemodel:2882: 2023-08-23 20:28:56.855288 - step 62 of 96 - 500 active elements (0 deactivated)
00:03 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:03 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:03 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:03 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:03 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:03 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:03 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:03 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 20:00:00 (before)
                2023-08-23 21:00:00 (after)
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:05 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 50x33x7) for time after (2023-08-23 21:00:00)
00:05 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 20:00:00) in space  (linearNDFast)
00:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:05 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 21:00:00) in space  (linearNDFast)
00:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:05 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 20:00:00, weight 0.52) and
                      after (2023-08-23 21:00:00, weight 0.48) in time
00:05 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.029429626145586 degrees.
00:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.029429626145586 degrees.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:05 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:05 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.182404 (min) 0.288799 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.168028 (min) 0.0891468 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.5783 (min) 9.45297 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.9537 (min) 3.2694 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.6015 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6568 (min) 17.2379 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.8387 (min) 32.7277 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: 3.46519e-06 (min) 0.000174155 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:05 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:05 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:05 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75509780166862
00:05 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.970581359955862
00:05 DEBUG   opendrift.models.basemodel:1548:               -32.97387251137459   <- z ->   -0.08965567514210365
00:05 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:05 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:05 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:05 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:05 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
00:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
00:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
00:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 487.   0.]
 [  0.   0.   0.   0.   0.]
 [129.   0.   0. 265.   0.]
 [  9.   0. 455.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:05 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:05 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0716011861051155
00:05 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:05 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:05 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:05 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 16 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:05 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:05 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:05 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:05 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
00:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
00:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [100, 0, 109, 291, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:05 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:05 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:05 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:05 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:05 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:05 INFO    opendrift.models.basemodel:2882: 2023-08-23 20:58:56.855288 - step 63 of 96 - 500 active elements (0 deactivated)
00:05 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:05 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:05 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 20:00:00 (before)
                2023-08-23 21:00:00 (after)
00:05 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 20:00:00) in space  (linearNDFast)
00:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:05 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 21:00:00) in space  (linearNDFast)
00:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:05 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 20:00:00, weight 0.02) and
                      after (2023-08-23 21:00:00, weight 0.98) in time
00:05 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.02879511700303 degrees.
00:05 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.02879511700303 degrees.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:05 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:05 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:05 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:05 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:05 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:05 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:05 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:05 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.182243 (min) 0.249051 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.164267 (min) 0.106591 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.5291 (min) 9.77437 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.79054 (min) 3.17285 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.5131 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6551 (min) 17.2105 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.7185 (min) 32.7288 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000120082 (min) 0.000178838 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:05 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:05 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:05 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:05 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.75428573360171
00:05 DEBUG   opendrift.models.basemodel:1543:               10.534906094435682 <- longitude -> 10.971215866320685
00:05 DEBUG   opendrift.models.basemodel:1548:               -31.169020875046492   <- z ->   -0.07363358506825235
00:05 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:05 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:05 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:05 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:05 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
00:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 3 0 0 2 0 2 0]
00:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 0 3 0 3]
00:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 493.   0.]
 [  0.   0.   0.   0.   0.]
 [131.   0.   0. 269.   0.]
 [ 10.   0. 456.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:05 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:05 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.07543743083407178
00:05 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:05 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:05 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:05 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:05 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
00:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
00:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [97, 0, 110, 293, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:05 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:05 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:05 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:05 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:05 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:05 INFO    opendrift.models.basemodel:2882: 2023-08-23 21:28:56.855288 - step 64 of 96 - 500 active elements (0 deactivated)
00:05 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:05 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:05 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:05 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:05 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:05 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:05 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:05 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 21:00:00 (before)
                2023-08-23 22:00:00 (after)
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:06 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:06 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 50x34x7) for time after (2023-08-23 22:00:00)
00:06 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 21:00:00) in space  (linearNDFast)
00:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:06 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 22:00:00) in space  (linearNDFast)
00:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:06 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 21:00:00, weight 0.52) and
                      after (2023-08-23 22:00:00, weight 0.48) in time
00:06 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:06 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.021267353634265 degrees.
00:06 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.021267353634265 degrees.
00:06 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:06 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:06 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:06 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:06 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:06 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:06 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:06 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:06 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:06 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:06 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:06 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:06 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:06 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:06 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:06 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:06 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:06 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:06 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:07 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:07 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.192505 (min) 0.231364 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.191669 (min) 0.109802 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.38113 (min) 9.924 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.41404 (min) 2.86558 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 41.1529 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.655 (min) 17.1935 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.7316 (min) 32.7678 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000158783 (min) 0.000179033 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:07 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:07 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:07 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.752948980122554
00:07 DEBUG   opendrift.models.basemodel:1543:               10.534906094435678 <- longitude -> 10.978743631091524
00:07 DEBUG   opendrift.models.basemodel:1548:               -29.886522834166698   <- z ->   0.0
00:07 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:07 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:07 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:07 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
00:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0]
00:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3]
00:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 496.   0.]
 [  0.   0.   0.   0.   0.]
 [131.   0.   0. 269.   0.]
 [ 10.   0. 459.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:07 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:07 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.07591361190347837
00:07 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:07 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:07 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 2 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 2 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
00:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
00:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [94, 0, 108, 298, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:07 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:07 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:07 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:07 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:07 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:07 INFO    opendrift.models.basemodel:2882: 2023-08-23 21:58:56.855288 - step 65 of 96 - 500 active elements (0 deactivated)
00:07 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:07 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:07 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 21:00:00 (before)
                2023-08-23 22:00:00 (after)
00:07 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 21:00:00) in space  (linearNDFast)
00:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:07 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 22:00:00) in space  (linearNDFast)
00:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:07 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 21:00:00, weight 0.02) and
                      after (2023-08-23 22:00:00, weight 0.98) in time
00:07 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.02100864686442 degrees.
00:07 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.02100864686442 degrees.
00:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:07 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:07 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:07 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:07 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:07 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:07 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:07 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:07 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.200692 (min) 0.247329 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.174183 (min) 0.123954 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.22957 (min) 10.0728 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.03606 (min) 2.62903 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 40.304 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.655 (min) 17.1476 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.9152 (min) 32.7322 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000156538 (min) 0.000179105 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:07 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:07 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:07 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:07 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.74985122762078
00:07 DEBUG   opendrift.models.basemodel:1543:               10.534906094435675 <- longitude -> 10.97900235059044
00:07 DEBUG   opendrift.models.basemodel:1548:               -32.271033851664136   <- z ->   0.0
00:07 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:07 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:07 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
00:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 2 0 0 0 2 2]
00:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 3 0 0]
00:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 499.   0.]
 [  0.   0.   0.   0.   0.]
 [134.   0.   0. 273.   0.]
 [ 11.   0. 461.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:07 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:07 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.07647927595294975
00:07 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:07 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:07 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:07 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:07 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:07 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
00:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
00:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
00:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [95, 0, 107, 298, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:07 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:07 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:07 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:07 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:07 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:07 INFO    opendrift.models.basemodel:2882: 2023-08-23 22:28:56.855288 - step 66 of 96 - 500 active elements (0 deactivated)
00:07 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:07 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:07 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:07 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:07 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:07 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:07 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:07 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 22:00:00 (before)
                2023-08-23 23:00:00 (after)
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:08 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:08 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 49x34x7) for time after (2023-08-23 23:00:00)
00:08 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 22:00:00) in space  (linearNDFast)
00:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:08 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 23:00:00) in space  (linearNDFast)
00:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:08 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 22:00:00, weight 0.52) and
                      after (2023-08-23 23:00:00, weight 0.48) in time
00:08 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:08 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.021748318595904 degrees.
00:08 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.021748318595904 degrees.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:08 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:08 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:08 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:08 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:08 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:08 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:08 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.200436 (min) 0.273827 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.129218 (min) 0.153151 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.89672 (min) 10.1486 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.79266 (min) 2.40513 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 40.1306 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6519 (min) 17.1139 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.9255 (min) 32.7185 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000145887 (min) 0.000174529 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:08 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:08 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:08 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.749219749744555
00:08 DEBUG   opendrift.models.basemodel:1543:               10.534906094435675 <- longitude -> 10.978262673903632
00:08 DEBUG   opendrift.models.basemodel:1548:               -32.23841126443756   <- z ->   0.0
00:08 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:08 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:08 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:08 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:08 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
00:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0]
00:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3]
00:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 502.   0.]
 [  0.   0.   0.   0.   0.]
 [135.   0.   0. 276.   0.]
 [ 11.   0. 466.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:08 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:08 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0769044066044704
00:08 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:08 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:08 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:08 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:08 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
00:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
00:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [93, 0, 108, 299, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:08 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:08 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:08 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:08 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:08 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:08 INFO    opendrift.models.basemodel:2882: 2023-08-23 22:58:56.855288 - step 67 of 96 - 500 active elements (0 deactivated)
00:08 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:08 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:08 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 22:00:00 (before)
                2023-08-23 23:00:00 (after)
00:08 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 22:00:00) in space  (linearNDFast)
00:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:08 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-23 23:00:00) in space  (linearNDFast)
00:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:08 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 22:00:00, weight 0.02) and
                      after (2023-08-23 23:00:00, weight 0.98) in time
00:08 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:08 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.023778457983624 degrees.
00:08 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.023778457983624 degrees.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:08 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:08 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:08 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:08 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:08 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:08 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:08 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:08 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:08 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:08 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:08 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.227147 (min) 0.283691 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.163727 (min) 0.182543 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.48808 (min) 10.2584 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     y_wind: 1.52141 (min) 2.19335 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 40.2349 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6487 (min) 17.0888 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 28.8097 (min) 32.7195 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000293946 (min) 0.000169784 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:08 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:08 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:08 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:08 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.74941168654997
00:08 DEBUG   opendrift.models.basemodel:1543:               10.534906094435676 <- longitude -> 10.97623253596519
00:08 DEBUG   opendrift.models.basemodel:1548:               -32.40337225586566   <- z ->   0.0
00:08 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:08 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:08 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:08 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:08 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
00:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 3 0 0]
00:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3]
00:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 504.   0.]
 [  0.   0.   0.   0.   0.]
 [136.   0.   0. 277.   0.]
 [ 12.   0. 469.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:08 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:08 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0777209520367779
00:08 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:08 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:08 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:08 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:08 DEBUG   opendrift.models.oceandrift:582: 3 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:08 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:08 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:08 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
00:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
00:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [93, 0, 125, 282, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:08 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:08 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:08 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:08 DEBUG   opendrift.models.basemodel:831: No elements hit seafloor.
00:08 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:08 INFO    opendrift.models.basemodel:2882: 2023-08-23 23:28:56.855288 - step 68 of 96 - 500 active elements (0 deactivated)
00:08 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:08 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:08 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:08 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:08 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:08 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:08 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:08 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 23:00:00 (before)
                2023-08-24 00:00:00 (after)
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:09 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:09 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 49x34x7) for time after (2023-08-24 00:00:00)
00:09 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 23:00:00) in space  (linearNDFast)
00:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:09 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-24 00:00:00) in space  (linearNDFast)
00:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:09 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 23:00:00, weight 0.52) and
                      after (2023-08-24 00:00:00, weight 0.48) in time
00:09 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.0213436780405 degrees.
00:09 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.0213436780405 degrees.
00:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:09 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:09 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:09 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:09 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:09 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:09 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:09 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:09 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.229913 (min) 0.305548 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.0554709 (min) 0.210801 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     x_wind: 6.75855 (min) 10.1697 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.04336 (min) 2.48958 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 39.5096 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6486 (min) 16.9915 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 29.2829 (min) 32.7037 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000360494 (min) 0.000157092 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:09 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:09 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:09 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:09 DEBUG   opendrift.models.basemodel:1538:               57.577193077686715 <- latitude  -> 57.74993475956165
00:09 DEBUG   opendrift.models.basemodel:1543:               10.534906094435676 <- longitude -> 10.978667305845489
00:09 DEBUG   opendrift.models.basemodel:1548:               -33.00127430335909   <- z ->   -0.20470264247015413
00:09 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:09 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:09 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
00:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0]
00:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3]
00:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 506.   0.]
 [  0.   0.   0.   0.   0.]
 [136.   0.   0. 279.   0.]
 [ 12.   0. 489.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:09 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:09 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.07780890279821458
00:09 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:09 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:09 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 15 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 6 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.oceandrift:582: 4 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:09 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
00:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
00:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [91, 0, 142, 267, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:09 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:09 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:09 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:09 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:09 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:09 INFO    opendrift.models.basemodel:2882: 2023-08-23 23:58:56.855288 - step 69 of 96 - 500 active elements (0 deactivated)
00:09 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:09 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:09 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:09 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:09 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:09 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:09 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:09 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-23 23:00:00 (before)
                2023-08-24 00:00:00 (after)
00:09 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-23 23:00:00) in space  (linearNDFast)
00:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:09 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-24 00:00:00) in space  (linearNDFast)
00:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:09 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-23 23:00:00, weight 0.02) and
                      after (2023-08-24 00:00:00, weight 0.98) in time
00:09 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:10 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.019065314676574 degrees.
00:10 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.019065314676574 degrees.
00:10 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:10 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:10 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:10 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:10 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:10 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:10 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:10 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:10 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:10 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:10 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:10 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:10 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:10 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:10 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:10 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:10 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:10 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:10 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:10 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:10 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.247003 (min) 0.339498 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: -0.00648027 (min) 0.244667 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.05443 (min) 10.0935 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.32948 (min) 2.88399 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 39.7603 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6486 (min) 17.0113 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 29.0789 (min) 32.7425 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000617899 (min) 0.000143106 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:10 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:10 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:10 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:10 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.75175186989431
00:10 DEBUG   opendrift.models.basemodel:1543:               10.534906094435676 <- longitude -> 10.980945674138075
00:10 DEBUG   opendrift.models.basemodel:1548:               -33.231040954589844   <- z ->   -0.06121712508550414
00:10 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:10 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 3 elements to seafloor.
00:10 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:10 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
00:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 2]
00:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 0]
00:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 510.   0.]
 [  0.   0.   0.   0.   0.]
 [138.   0.   0. 283.   0.]
 [ 12.   0. 510.   0.   0.]
 [  0.   0.   0.   0.   0.]]
00:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
00:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
00:10 DEBUG   opendrift.models.oceandrift:490: Using functional expression for diffusivity
00:10 DEBUG   opendrift.models.oceandrift:499: Diffusivities are in range 0.0 to 0.0786495118299903
00:10 DEBUG   opendrift.models.oceandrift:518: TSprofiles deactivated for vertical mixing
00:10 DEBUG   opendrift.models.oceandrift:533: Vertical mixing module:windspeed_Large1994
00:10 DEBUG   opendrift.models.oceandrift:536: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
00:10 DEBUG   opendrift.models.oceandrift:582: 18 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 17 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 5 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 9 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 11 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 14 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:10 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:10 DEBUG   opendrift.models.oceandrift:582: 8 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 12 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:600: 1 elements reached seafloor, set to bottom
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:10 DEBUG   opendrift.models.oceandrift:582: 10 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 7 elements penetrated seafloor, lifting up
00:10 DEBUG   opendrift.models.oceandrift:582: 13 elements penetrated seafloor, lifting up
00:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 125
00:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
00:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 125 elements
00:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
00:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [89, 0, 261, 150, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
00:10 DEBUG   opendrift.models.basemodel:2420: Horizontal diffusivity is 0, no random walk.
00:10 DEBUG   opendrift.models.basemodel:2945: 500 active elements (0 deactivated)
00:10 DEBUG   opendrift.models.basemodel:1658: to be seeded: 0, already seeded 500
00:10 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:10 DEBUG   opendrift.models.basemodel:2881: ======================================================================
00:10 INFO    opendrift.models.basemodel:2882: 2023-08-24 00:28:56.855288 - step 70 of 96 - 500 active elements (0 deactivated)
00:10 DEBUG   opendrift.models.basemodel:2888: 0 elements scheduled.
00:10 DEBUG   opendrift.models.basemodel:2890: ======================================================================
00:10 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1231: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
00:10 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1236: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:10 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:10 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:10 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
00:10 DEBUG   opendrift.readers.basereader.structured:184: Reader time:
                2023-08-24 00:00:00 (before)
                2023-08-24 01:00:00 (after)
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking sea_floor_depth_below_sea_level for invalid values
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking x_wind for invalid values
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking y_wind for invalid values
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking x_sea_water_velocity for invalid values
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking y_sea_water_velocity for invalid values
00:11 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['x_sea_water_velocity', 'sea_water_temperature', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_water_salinity']
00:11 DEBUG   opendrift.readers.basereader.structured:275: Fetched env-block (size 49x35x7) for time after (2023-08-24 01:00:00)
00:11 DEBUG   opendrift.readers.basereader.structured:296: Interpolating before (2023-08-24 00:00:00) in space  (linearNDFast)
00:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:11 DEBUG   opendrift.readers.basereader.structured:302: Interpolating after (2023-08-24 01:00:00) in space  (linearNDFast)
00:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
00:11 DEBUG   opendrift.readers.basereader.structured:317: Interpolating before (2023-08-24 00:00:00, weight 0.52) and
                      after (2023-08-24 01:00:00, weight 0.48) in time
00:11 DEBUG   opendrift.readers.basereader.structured:330: Interpolating profiles in time
00:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.016176216856806 degrees.
00:11 DEBUG   opendrift.readers.basereader.variables:87: Rotating vectors between -59.46510499537722 and -59.016176216856806 degrees.
00:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['ocean_mixed_layer_thickness']
00:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1236: Calling reader constant_reader
00:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from constant_reader
00:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:11 DEBUG   opendrift.models.basemodel:1230: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1231: Variable group ['land_binary_mask']
00:11 DEBUG   opendrift.models.basemodel:1232: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1236: Calling reader global_landmask
00:11 DEBUG   opendrift.models.basemodel:1237: ----------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1253: Data needed for 500 elements
00:11 DEBUG   opendrift.readers.basereader.variables:737: Fetching variables from global_landmask
00:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
00:11 DEBUG   opendrift.readers.basereader.variables:618: Checking land_binary_mask for invalid values
00:11 DEBUG   opendrift.readers.basereader.variables:773: Reader projection is latlon - rotation of vectors is not needed.
00:11 DEBUG   opendrift.models.basemodel:1384: Obtained data for all elements.
00:11 DEBUG   opendrift.models.basemodel:1397: ---------------------------------------
00:11 DEBUG   opendrift.models.basemodel:1398: Finished processing all variable groups
00:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
00:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 10 for sea_water_temperature for 0 profiles
00:11 DEBUG   opendrift.models.basemodel:1432:       Using fallback value 34 for sea_water_salinity for 0 profiles
00:11 DEBUG   opendrift.models.basemodel:1421:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
00:11 DEBUG   opendrift.models.basemodel:1522: ------------ SUMMARY -------------
00:11 DEBUG   opendrift.models.basemodel:1524:     x_sea_water_velocity: -0.225323 (min) 0.304332 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     y_sea_water_velocity: 0.0263661 (min) 0.261533 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     x_wind: 7.05196 (min) 9.72057 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     y_wind: 2.21328 (min) 2.79024 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     land_binary_mask: 0 (min) 0 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     sea_floor_depth_below_sea_level: 10.4161 (min) 40.1792 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_temperature: 15.6451 (min) 16.9512 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_salinity: 29.0865 (min) 32.7361 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     upward_sea_water_velocity: -0.000730876 (min) 0.000125968 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     spm: 1 (min) 1 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     doc: 0 (min) 0 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
00:11 DEBUG   opendrift.models.basemodel:1524:     pH_sediment: 6.9 (min) 6.9 (max)
00:11 DEBUG   opendrift.models.basemodel:1526: ---------------------------------
00:11 DEBUG   opendrift.models.basemodel:1527:               500 active elements
00:11 DEBUG   opendrift.models.basemodel:1538:               57.57719307768672 <- latitude  -> 57.75396358661384
00:11 DEBUG   opendrift.models.basemodel:1543:               10.534906094435676 <- longitude -> 10.983834771125428
00:11 DEBUG   opendrift.models.basemodel:1548:               -33.23103713989258   <- z ->   -0.3566830923829956
00:11 DEBUG   opendrift.models.basemodel:1549: ---------------------------------
00:11 DEBUG   opendrift.models.basemodel:811: No elements hit coastline.
00:11 DEBUG   opendrift.models.basemodel:836: Lifting 1 elements to seafloor.
00:11 DEBUG   opendrift.models.basemodel:2466: No elements to deactivate
00:11 DEBUG   opendrift.models.basemodel:2930: Calling ChemicalDrift.update()
00:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
00:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
00:11 INFO    opendrift.models.chemicaldrift:1435: Nu