ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

17:11:22 DEBUG   opendrift.config:168: Adding 18 config items from __init__
17:11:22 DEBUG   opendrift.config:178:   Overwriting config item readers:max_number_of_fails
17:11:22 DEBUG   opendrift.config:168: Adding 13 config items from __init__
17:11:22 INFO    opendrift:509: OpenDriftSimulation initialised (version 1.13.0 / v1.13.0-15-g93fccf7)
17:11:22 DEBUG   opendrift.config:168: Adding 15 config items from oceandrift
17:11:22 DEBUG   opendrift.config:178:   Overwriting config item seed:z
17:11:23 DEBUG   opendrift.config:168: Adding 71 config items from chemicaldrift
17:11:23 INFO    opendrift.readers:58: Opening file with xr.open_dataset
17:11:24 DEBUG   opendrift.readers.reader_netCDF_CF_generic:128: Finding coordinate variables.
17:11:24 DEBUG   opendrift.readers.reader_netCDF_CF_generic:143: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
17:11:25 INFO    opendrift.readers.reader_netCDF_CF_generic:338: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
17:11:25 DEBUG   opendrift.readers.reader_netCDF_CF_generic:374: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
17:11:25 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
17:11:25 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
17:11:25 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
17:11:25 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
17:11:25 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
17:11:25 DEBUG   opendrift.models.basemodel.environment:316: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:25 DEBUG   opendrift.models.basemodel.environment:316: Added reader constant_reader
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:sea_surface_height [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_surface_height [0] float min: None, max: None [None] Fallback value for s...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: -20, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: -20, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:max_speed                     [2.0] float min: 0, max: inf [seconds] Typical maximum spee...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
general:simulation_name             [] str   min length 0, max length 64 Name of simulation...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:coastline_approximation_precision [0.001] float min: 0.0001, max: 0.005 [degrees] The precision of the...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:profiles_depth                [50] float min: 0, max: None [meters] Environment profiles...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

17:11:25 DEBUG   opendrift.models.chemicaldrift:870: Partitioning coefficients (Tref,freshwater)
17:11:25 DEBUG   opendrift.models.chemicaldrift:871: KOC_sed: 12953.922406542462 L/KgOC
17:11:25 DEBUG   opendrift.models.chemicaldrift:872: KOC_SPM: 12953.922406542462 L/KgOC
17:11:25 DEBUG   opendrift.models.chemicaldrift:873: KOC_DOM: 3004.29439651874 L/KgOC
17:11:25 DEBUG   opendrift.models.chemicaldrift:885: Kd_sed: 647.6961203271231 L/Kg
17:11:25 DEBUG   opendrift.models.chemicaldrift:886: Kd_SPM: 647.6961203271231 L/Kg
17:11:25 DEBUG   opendrift.models.chemicaldrift:887: Kd_DOM: 1580.2588525688573 L/Kg
17:11:25 DEBUG   opendrift.models.chemicaldrift:1104: nspecies: 5
17:11:25 DEBUG   opendrift.models.chemicaldrift:1105: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
  0.00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
  3.16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]]
17:11:25 DEBUG   opendrift.models.chemicaldrift:509: Initial partitioning:
17:11:25 DEBUG   opendrift.models.chemicaldrift:511:       449   0 LMM
17:11:25 DEBUG   opendrift.models.chemicaldrift:511:         0   1 Humic colloid
17:11:25 DEBUG   opendrift.models.chemicaldrift:511:        51   2 Particle reversible
17:11:25 DEBUG   opendrift.models.chemicaldrift:511:         0   3 Sediment reversible
17:11:25 DEBUG   opendrift.models.chemicaldrift:511:         0   4 Sediment slowly reversible
17:11:25 INFO    opendrift.models.basemodel.environment:206: Adding a dynamical landmask with max. priority based on assumed maximum speed of 2.0 m/s. Adding a customised landmask may be faster...
17:11:25 DEBUG   opendrift.readers.basereader:186: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
17:11:29 DEBUG   opendrift.models.basemodel.environment:316: Added reader global_landmask
17:11:29 INFO    opendrift.models.basemodel.environment:233: Fallback values will be used for the following variables which have no readers:
17:11:29 INFO    opendrift.models.basemodel.environment:236:    ocean_vertical_diffusivity: 0.000100
17:11:29 INFO    opendrift.models.basemodel.environment:236:    spm: 1.000000
17:11:29 INFO    opendrift.models.basemodel.environment:236:    active_sediment_layer_thickness: 0.030000
17:11:29 INFO    opendrift.models.basemodel.environment:236:    doc: 0.000000
17:11:29 INFO    opendrift.models.basemodel.environment:236:    sea_water_ph_reported_on_total_scale: 8.100000
17:11:29 INFO    opendrift.models.basemodel.environment:236:    pH_sediment: 6.900000
17:11:29 DEBUG   opendrift:100: Changed mode from Mode.Config to Mode.Ready

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

17:11:29 DEBUG   opendrift:100: Changed mode from Mode.Ready to Mode.Run
17:11:29 DEBUG   opendrift:1763:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.13.0
  Platform: Linux, 5.15.0-1064-aws
  68.56759643554688 GB memory
  36 processors (x86_64)
  NumPy version 1.26.4
  SciPy version 1.15.1
  Matplotlib version 3.9.1
  NetCDF4 version 1.6.1
  Xarray version 2025.1.2
  ADIOS (adios_db) version 1.2.5
  Copernicusmarine version 2.0.1
  Python version 3.11.6 | packaged by conda-forge | (main, Oct  3 2023, 10:40:35) [GCC 12.3.0]
------------------------------------------------------

17:11:29 DEBUG   opendrift:1777: No output file is specified, neglecting export_buffer_length
17:11:29 DEBUG   opendrift:1895: Finalizing environment and preparing readers for simulation coverage ([4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]) and time (2025-02-08 17:11:25.118634 to 2025-02-10 17:11:25.118634)
17:11:29 DEBUG   opendrift.models.basemodel.environment:168:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
17:11:29 DEBUG   opendrift.readers.basereader.structured:153: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
17:11:29 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 11 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 2 m/s and time span of 1:00:00
17:11:29 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:29 DEBUG   opendrift.models.basemodel.environment:168:    Preparing constant_reader for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
17:11:29 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for constant_reader
17:11:29 DEBUG   opendrift.models.basemodel.environment:168:    Preparing global_landmask for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
17:11:29 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for global_landmask
17:11:29 DEBUG   opendrift:1982: Initial self.result, size Frozen({'trajectory': 500, 'time': 97})
17:11:29 INFO    opendrift:919: Using existing reader for land_binary_mask
17:11:29 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:29 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:29 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:29 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:29 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:29 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:29 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:29 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:29 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:29 INFO    opendrift:930: All points are in ocean
17:11:29 INFO    opendrift.models.chemicaldrift:352: Number of species: 5
17:11:29 INFO    opendrift.models.chemicaldrift:354:   0 LMM
17:11:29 INFO    opendrift.models.chemicaldrift:354:   1 Humic colloid
17:11:29 INFO    opendrift.models.chemicaldrift:354:   2 Particle reversible
17:11:29 INFO    opendrift.models.chemicaldrift:354:   3 Sediment reversible
17:11:29 INFO    opendrift.models.chemicaldrift:354:   4 Sediment slowly reversible
17:11:29 INFO    opendrift.models.chemicaldrift:357: transfer setup: organics
17:11:29 INFO    opendrift.models.chemicaldrift:359: nspecies: 5
17:11:29 INFO    opendrift.models.chemicaldrift:360: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
  0.00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
  3.16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
  0.00000000e+00]]
17:11:29 DEBUG   opendrift:874: to be seeded: 500, already seeded 0
17:11:29 DEBUG   opendrift:892: Released 500 new elements.
17:11:29 WARNING opendrift:713: Seafloor check not being run because environment is missing. This will happen the first time the function is run but if it happens subsequently there is probably a problem.
17:11:29 DEBUG   opendrift:2055: ======================================================================
17:11:29 INFO    opendrift:2056: 2025-02-08 17:11:25.118634 - step 1 of 96 - 500 active elements (0 deactivated)
17:11:29 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:29 DEBUG   opendrift:2064: ======================================================================
17:11:29 DEBUG   opendrift:2075:                57.546223 <- latitude  -> 57.64813
17:11:29 DEBUG   opendrift:2080:                10.507113 <- longitude -> 10.70608
17:11:29 DEBUG   opendrift:2085:                -9.98847   <- z ->   -0.046954762
17:11:29 DEBUG   opendrift:2086: ---------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:29 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:29 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:29 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:29 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 17:00:00 (before)
                2025-02-08 18:00:00 (after)
17:11:31 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:31 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:31 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:31 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:31 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:31 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:31 DEBUG   opendrift.readers.basereader.structured:292: Fetched env-block (size 37x35x7) for time before (2025-02-08 17:00:00)
17:11:33 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:33 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:33 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:33 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:33 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:33 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:33 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 37x35x7) for time after (2025-02-08 18:00:00)
17:11:33 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 17:00:00) in space  (linearNDFast)
17:11:33 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 18:00:00) in space  (linearNDFast)
17:11:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 17:00:00, weight 0.81) and
                      after (2025-02-08 18:00:00, weight 0.19) in time
17:11:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
17:11:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.121457 (min) 0.169413 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.193267 (min) 0.503673 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.525835 (min) -0.486936 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -8.23507 (min) -8.00797 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 0.412259 (min) 1.07339 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 5.01905 (min) 6.00132 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5751 (min) 30.9051 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000162418 (min) 3.25024e-07 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:34 DEBUG   opendrift:694: No elements hit coastline.
17:11:34 DEBUG   opendrift:733: No elements hit seafloor.
17:11:34 DEBUG   opendrift:1695: No elements to deactivate
17:11:34 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
17:11:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:11:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:34 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:34 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.04934341926476536
17:11:34 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:34 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:34 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 44 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 46 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 44 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 44 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 39 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:11:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:11:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:11:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [450, 0, 50, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:34 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:34 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:34 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:11:34 DEBUG   opendrift:2055: ======================================================================
17:11:34 INFO    opendrift:2056: 2025-02-08 17:41:25.118634 - step 2 of 96 - 500 active elements (0 deactivated)
17:11:34 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:34 DEBUG   opendrift:2064: ======================================================================
17:11:34 DEBUG   opendrift:2075:                57.5533409711388 <- latitude  -> 57.65583836655366
17:11:34 DEBUG   opendrift:2080:                10.508401089810661 <- longitude -> 10.705512696020753
17:11:34 DEBUG   opendrift:2085:                -19.911465362197337   <- z ->   -0.10639550847907575
17:11:34 DEBUG   opendrift:2086: ---------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 17:00:00 (before)
                2025-02-08 18:00:00 (after)
17:11:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 17:00:00) in space  (linearNDFast)
17:11:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 18:00:00) in space  (linearNDFast)
17:11:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 17:00:00, weight 0.31) and
                      after (2025-02-08 18:00:00, weight 0.69) in time
17:11:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49161000221986 and -59.294498368784005 degrees.
17:11:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49161000221986 and -59.294498368784005 degrees.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:34 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:34 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.105719 (min) 0.178391 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.135284 (min) 0.520363 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.564004 (min) -0.525924 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -8.00226 (min) -7.83882 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 0.773663 (min) 1.27042 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.49585 (min) 23.494 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 5.00887 (min) 6.35778 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.7408 (min) 31.7514 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000177865 (min) 8.18952e-07 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:34 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:34 DEBUG   opendrift:694: No elements hit coastline.
17:11:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:11:34 DEBUG   opendrift:1695: No elements to deactivate
17:11:34 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
17:11:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
17:11:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 15.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  4.  0.]
 [ 0.  0.  4.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
17:11:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:34 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:34 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.047054856568508684
17:11:34 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:34 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:34 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:34 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 44 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 39 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 39 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 39 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:34 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:34 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
17:11:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
17:11:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [436, 0, 64, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:34 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:34 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:34 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:34 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:34 DEBUG   opendrift:2055: ======================================================================
17:11:34 INFO    opendrift:2056: 2025-02-08 18:11:25.118634 - step 3 of 96 - 500 active elements (0 deactivated)
17:11:34 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:34 DEBUG   opendrift:2064: ======================================================================
17:11:34 DEBUG   opendrift:2075:                57.55576990406566 <- latitude  -> 57.66126714048839
17:11:34 DEBUG   opendrift:2080:                10.509538771019777 <- longitude -> 10.707645949974308
17:11:34 DEBUG   opendrift:2085:                -19.7874970176626   <- z ->   -0.1620816700702612
17:11:34 DEBUG   opendrift:2086: ---------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 18:00:00 (before)
                2025-02-08 19:00:00 (after)
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:36 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:36 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 38x34x7) for time after (2025-02-08 19:00:00)
17:11:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 18:00:00) in space  (linearNDFast)
17:11:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 19:00:00) in space  (linearNDFast)
17:11:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 18:00:00, weight 0.81) and
                      after (2025-02-08 19:00:00, weight 0.19) in time
17:11:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.490472315347276 and -59.29236510571785 degrees.
17:11:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.490472315347276 and -59.29236510571785 degrees.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0957777 (min) 0.201525 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.149558 (min) 0.543462 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.596052 (min) -0.557687 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.69948 (min) -7.57944 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.04989 (min) 1.45787 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.4289 (min) 23.2953 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 5.00462 (min) 6.34962 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5542 (min) 31.7391 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000196263 (min) 1.29491e-05 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:36 DEBUG   opendrift:694: No elements hit coastline.
17:11:36 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:36 DEBUG   opendrift:1695: No elements to deactivate
17:11:36 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
17:11:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 20
17:11:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 35.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  8.  0.]
 [ 0.  0. 23.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:36 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:36 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.04409022535057254
17:11:36 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:36 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:36 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:36 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 46 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 44 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 46 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 40 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:11:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
17:11:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
17:11:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [416, 0, 84, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:36 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:36 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:36 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:36 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:36 DEBUG   opendrift:2055: ======================================================================
17:11:36 INFO    opendrift:2056: 2025-02-08 18:41:25.118634 - step 4 of 96 - 500 active elements (0 deactivated)
17:11:36 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:36 DEBUG   opendrift:2064: ======================================================================
17:11:36 DEBUG   opendrift:2075:                57.55856888226133 <- latitude  -> 57.66913267114293
17:11:36 DEBUG   opendrift:2080:                10.511085001086512 <- longitude -> 10.706977069361255
17:11:36 DEBUG   opendrift:2085:                -22.608741760253906   <- z ->   -0.05811416786034118
17:11:36 DEBUG   opendrift:2086: ---------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 18:00:00 (before)
                2025-02-08 19:00:00 (after)
17:11:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 18:00:00) in space  (linearNDFast)
17:11:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 19:00:00) in space  (linearNDFast)
17:11:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 18:00:00, weight 0.31) and
                      after (2025-02-08 19:00:00, weight 0.69) in time
17:11:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48892608196369 and -59.293033974501036 degrees.
17:11:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48892608196369 and -59.293033974501036 degrees.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:36 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:36 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:36 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0626073 (min) 0.22284 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.141999 (min) 0.552204 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.618151 (min) -0.580842 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.30766 (min) -7.17715 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.17104 (min) 1.55592 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.38829 (min) 22.9885 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.99781 (min) 6.34636 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5734 (min) 31.7372 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000185677 (min) 2.2469e-05 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:36 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:36 DEBUG   opendrift:694: No elements hit coastline.
17:11:36 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:36 DEBUG   opendrift:1695: No elements to deactivate
17:11:36 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
17:11:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
17:11:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 46.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0. 16.  0.]
 [ 0.  0. 51.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
17:11:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:36 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:36 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.039996553770262795
17:11:36 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:36 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:36 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:36 DEBUG   opendrift.models.oceandrift:517: 38 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 41 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 40 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:36 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:36 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:36 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
17:11:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
17:11:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [405, 0, 94, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:36 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:36 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:36 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:36 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:11:36 DEBUG   opendrift:2055: ======================================================================
17:11:36 INFO    opendrift:2056: 2025-02-08 19:11:25.118634 - step 5 of 96 - 500 active elements (0 deactivated)
17:11:36 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:36 DEBUG   opendrift:2064: ======================================================================
17:11:36 DEBUG   opendrift:2075:                57.56371470183735 <- latitude  -> 57.67709793569102
17:11:36 DEBUG   opendrift:2080:                10.512685300201039 <- longitude -> 10.709402715904739
17:11:36 DEBUG   opendrift:2085:                -20.62110243269382   <- z ->   -0.05823579685216829
17:11:36 DEBUG   opendrift:2086: ---------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 19:00:00 (before)
                2025-02-08 20:00:00 (after)
17:11:37 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:37 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:37 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 40x33x7) for time after (2025-02-08 20:00:00)
17:11:37 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 19:00:00) in space  (linearNDFast)
17:11:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:37 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 20:00:00) in space  (linearNDFast)
17:11:37 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:37 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 19:00:00, weight 0.81) and
                      after (2025-02-08 20:00:00, weight 0.19) in time
17:11:37 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48732578313612 and -59.29060833547909 degrees.
17:11:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48732578313612 and -59.29060833547909 degrees.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:38 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0623261 (min) 0.220586 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.128772 (min) 0.551321 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.627347 (min) -0.590334 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.00443 (min) -6.85997 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.35118 (min) 1.69942 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.34764 (min) 22.8967 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.99881 (min) 6.34608 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.6775 (min) 31.7335 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000177953 (min) 5.04752e-05 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:38 DEBUG   opendrift:694: No elements hit coastline.
17:11:38 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:38 DEBUG   opendrift:1695: No elements to deactivate
17:11:38 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
17:11:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 57.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0. 24.  0.]
 [ 0.  0. 69.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:38 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:38 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.036978895078146376
17:11:38 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:38 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:38 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 38 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 38 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
17:11:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
17:11:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [394, 0, 105, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:38 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:38 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:38 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift:2055: ======================================================================
17:11:38 INFO    opendrift:2056: 2025-02-08 19:41:25.118634 - step 6 of 96 - 500 active elements (0 deactivated)
17:11:38 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:38 DEBUG   opendrift:2064: ======================================================================
17:11:38 DEBUG   opendrift:2075:                57.56616433019471 <- latitude  -> 57.684864287423295
17:11:38 DEBUG   opendrift:2080:                10.514276043651307 <- longitude -> 10.712568142916354
17:11:38 DEBUG   opendrift:2085:                -21.039894104003906   <- z ->   -0.22219964216738197
17:11:38 DEBUG   opendrift:2086: ---------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 19:00:00 (before)
                2025-02-08 20:00:00 (after)
17:11:38 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 19:00:00) in space  (linearNDFast)
17:11:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:38 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 20:00:00) in space  (linearNDFast)
17:11:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:38 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 19:00:00, weight 0.31) and
                      after (2025-02-08 20:00:00, weight 0.69) in time
17:11:38 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48573504534464 and -59.28744291304416 degrees.
17:11:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48573504534464 and -59.28744291304416 degrees.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:38 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:38 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:38 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0608303 (min) 0.244449 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.112725 (min) 0.569058 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.616532 (min) -0.579206 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.79867 (min) -6.70759 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.66409 (min) 1.90452 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.31231 (min) 22.8053 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.94163 (min) 6.35295 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3727 (min) 31.7455 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000176049 (min) 7.86233e-05 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:38 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:38 DEBUG   opendrift:694: No elements hit coastline.
17:11:38 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:11:38 DEBUG   opendrift:1695: No elements to deactivate
17:11:38 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:11:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 64.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0. 31.  0.]
 [ 0.  0. 87.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
17:11:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:38 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:38 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.035612720935097646
17:11:38 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:38 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:38 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:38 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 40 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 41 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 40 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:38 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:38 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
17:11:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
17:11:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [388, 0, 111, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:38 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:38 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:38 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:38 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:38 DEBUG   opendrift:2055: ======================================================================
17:11:38 INFO    opendrift:2056: 2025-02-08 20:11:25.118634 - step 7 of 96 - 500 active elements (0 deactivated)
17:11:38 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:38 DEBUG   opendrift:2064: ======================================================================
17:11:38 DEBUG   opendrift:2075:                57.56824823286989 <- latitude  -> 57.69209854890505
17:11:38 DEBUG   opendrift:2080:                10.515800271686643 <- longitude -> 10.714086672024706
17:11:38 DEBUG   opendrift:2085:                -20.93431340190989   <- z ->   -0.1310546177024759
17:11:38 DEBUG   opendrift:2086: ---------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 20:00:00 (before)
                2025-02-08 21:00:00 (after)
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:40 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:40 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 42x34x7) for time after (2025-02-08 21:00:00)
17:11:40 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 20:00:00) in space  (linearNDFast)
17:11:40 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:40 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 21:00:00) in space  (linearNDFast)
17:11:40 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:40 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 20:00:00, weight 0.81) and
                      after (2025-02-08 21:00:00, weight 0.19) in time
17:11:40 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48421081254759 and -59.28592437886758 degrees.
17:11:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48421081254759 and -59.28592437886758 degrees.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:40 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0462722 (min) 0.209095 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.098411 (min) 0.531481 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.592222 (min) -0.554803 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.61415 (min) -6.51893 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.80079 (min) 2.03197 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.28724 (min) 22.7125 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.9818 (min) 6.33933 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.632 (min) 31.7272 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000144125 (min) 9.48677e-05 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:40 DEBUG   opendrift:694: No elements hit coastline.
17:11:40 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:40 DEBUG   opendrift:1695: No elements to deactivate
17:11:40 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
17:11:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0.  77.   0.]
 [  0.   0.   0.   0.   0.]
 [  3.   0.   0.  40.   0.]
 [  0.   0. 103.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:40 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:40 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.03450185183834361
17:11:40 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:40 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:40 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:40 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
17:11:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
17:11:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [375, 0, 120, 5, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:40 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:40 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:40 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift:2055: ======================================================================
17:11:40 INFO    opendrift:2056: 2025-02-08 20:41:25.118634 - step 8 of 96 - 500 active elements (0 deactivated)
17:11:40 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:40 DEBUG   opendrift:2064: ======================================================================
17:11:40 DEBUG   opendrift:2075:                57.57052156708934 <- latitude  -> 57.69578648210437
17:11:40 DEBUG   opendrift:2080:                10.51720070268304 <- longitude -> 10.718733889572675
17:11:40 DEBUG   opendrift:2085:                -21.818897247314453   <- z ->   -0.09717262539245164
17:11:40 DEBUG   opendrift:2086: ---------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 20:00:00 (before)
                2025-02-08 21:00:00 (after)
17:11:40 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 20:00:00) in space  (linearNDFast)
17:11:40 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:40 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 21:00:00) in space  (linearNDFast)
17:11:40 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:40 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 20:00:00, weight 0.31) and
                      after (2025-02-08 21:00:00, weight 0.69) in time
17:11:40 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.482810376524135 and -59.28127715269141 degrees.
17:11:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.482810376524135 and -59.28127715269141 degrees.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:40 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:40 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:40 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:40 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:40 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0752093 (min) 0.258447 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0869157 (min) 0.516133 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.544869 (min) -0.506903 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.48018 (min) -6.30664 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.65096 (min) 2.03741 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.26478 (min) 22.6167 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.972 (min) 6.33762 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5383 (min) 31.7248 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000158319 (min) 0.000109847 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:40 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:40 DEBUG   opendrift:694: No elements hit coastline.
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift:1695: No elements to deactivate
17:11:40 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
17:11:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 2 0 0]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 0 3 3]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0.  84.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  49.   0.]
 [  0.   0. 121.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:40 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:40 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.03326965856381294
17:11:40 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:40 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:40 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:40 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:40 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:40 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:40 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:11:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:11:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [370, 0, 122, 8, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:40 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:40 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:40 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:40 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:40 DEBUG   opendrift:2055: ======================================================================
17:11:40 INFO    opendrift:2056: 2025-02-08 21:11:25.118634 - step 9 of 96 - 500 active elements (0 deactivated)
17:11:40 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:40 DEBUG   opendrift:2064: ======================================================================
17:11:40 DEBUG   opendrift:2075:                57.57223144793167 <- latitude  -> 57.70101803184067
17:11:40 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.721906995116946
17:11:40 DEBUG   opendrift:2085:                -20.24111557006836   <- z ->   -0.007829575957370216
17:11:40 DEBUG   opendrift:2086: ---------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:40 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:40 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:40 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:40 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 21:00:00 (before)
                2025-02-08 22:00:00 (after)
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:41 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:41 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 43x34x7) for time after (2025-02-08 22:00:00)
17:11:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 21:00:00) in space  (linearNDFast)
17:11:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 22:00:00) in space  (linearNDFast)
17:11:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 21:00:00, weight 0.81) and
                      after (2025-02-08 22:00:00, weight 0.19) in time
17:11:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.278104037295606 degrees.
17:11:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.278104037295606 degrees.
17:11:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:41 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:41 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0641773 (min) 0.233546 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0768396 (min) 0.494196 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.487168 (min) -0.449214 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.3478 (min) -6.0696 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.46921 (min) 1.83524 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 22.6413 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.93409 (min) 6.33511 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4129 (min) 31.7262 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000143561 (min) 0.00012509 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:41 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:41 DEBUG   opendrift:694: No elements hit coastline.
17:11:41 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:42 DEBUG   opendrift:1695: No elements to deactivate
17:11:42 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:11:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0.  88.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  53.   0.]
 [  0.   0. 129.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:42 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:42 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.03150873335748066
17:11:42 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:42 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:42 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:42 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
17:11:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
17:11:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [366, 0, 121, 13, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:42 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:42 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:42 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:42 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:42 DEBUG   opendrift:2055: ======================================================================
17:11:42 INFO    opendrift:2056: 2025-02-08 21:41:25.118634 - step 10 of 96 - 500 active elements (0 deactivated)
17:11:42 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:42 DEBUG   opendrift:2064: ======================================================================
17:11:42 DEBUG   opendrift:2075:                57.57679702727387 <- latitude  -> 57.703580323970776
17:11:42 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.726157279552044
17:11:42 DEBUG   opendrift:2085:                -21.704033752048836   <- z ->   -0.1799202438272347
17:11:42 DEBUG   opendrift:2086: ---------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:42 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:42 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 21:00:00 (before)
                2025-02-08 22:00:00 (after)
17:11:42 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 21:00:00) in space  (linearNDFast)
17:11:42 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:42 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 22:00:00) in space  (linearNDFast)
17:11:42 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:42 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 21:00:00, weight 0.31) and
                      after (2025-02-08 22:00:00, weight 0.69) in time
17:11:42 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.27385375955771 degrees.
17:11:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.27385375955771 degrees.
17:11:42 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:42 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:42 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:42 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:42 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:42 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:42 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:42 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:42 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:42 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:42 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:42 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:42 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:42 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:42 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:42 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:42 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0786377 (min) 0.222711 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0528178 (min) 0.442919 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.412805 (min) -0.375705 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.2251 (min) -5.83166 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 1.2427 (min) 1.33062 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 22.8576 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.94492 (min) 6.34342 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4489 (min) 31.7372 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000125423 (min) 0.000131184 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:42 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:42 DEBUG   opendrift:694: No elements hit coastline.
17:11:42 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:42 DEBUG   opendrift:1695: No elements to deactivate
17:11:42 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
17:11:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 2 0 2 2 2 0 0 0 0]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 0 3 0 0 0 3 3 3 3]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0.  96.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  64.   0.]
 [  0.   0. 139.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:42 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:42 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.02922363757065441
17:11:42 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:42 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:42 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:42 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:42 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:42 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:11:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:11:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [363, 0, 115, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:42 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:42 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:42 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:42 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:42 DEBUG   opendrift:2055: ======================================================================
17:11:42 INFO    opendrift:2056: 2025-02-08 22:11:25.118634 - step 11 of 96 - 500 active elements (0 deactivated)
17:11:42 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:42 DEBUG   opendrift:2064: ======================================================================
17:11:42 DEBUG   opendrift:2075:                57.580293935834455 <- latitude  -> 57.70549925087385
17:11:42 DEBUG   opendrift:2080:                10.518206760315874 <- longitude -> 10.731231660747786
17:11:42 DEBUG   opendrift:2085:                -21.23511505126953   <- z ->   -0.25603511493483433
17:11:42 DEBUG   opendrift:2086: ---------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:42 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:42 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:42 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:42 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 22:00:00 (before)
                2025-02-08 23:00:00 (after)
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:43 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:43 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 43x33x7) for time after (2025-02-08 23:00:00)
17:11:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 22:00:00) in space  (linearNDFast)
17:11:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:43 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 23:00:00) in space  (linearNDFast)
17:11:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:43 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 22:00:00, weight 0.81) and
                      after (2025-02-08 23:00:00, weight 0.19) in time
17:11:43 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.2687793752825 degrees.
17:11:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.2687793752825 degrees.
17:11:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:43 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:43 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:43 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:43 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:43 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:43 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:43 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:43 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:43 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:43 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:43 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:43 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0786612 (min) 0.205929 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.020964 (min) 0.413812 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.339344 (min) -0.304259 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.10577 (min) -5.6737 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 0.802176 (min) 1.05464 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.1233 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.88203 (min) 6.33975 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3225 (min) 31.7297 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000135886 (min) 0.000131066 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:43 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:43 DEBUG   opendrift:694: No elements hit coastline.
17:11:43 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:44 DEBUG   opendrift:1695: No elements to deactivate
17:11:44 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
17:11:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 107.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  69.   0.]
 [  0.   0. 143.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:44 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:44 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.027424394542017495
17:11:44 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:44 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:44 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:44 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 37 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 37 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
17:11:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [352, 0, 109, 39, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:44 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:44 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:44 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift:2055: ======================================================================
17:11:44 INFO    opendrift:2056: 2025-02-08 22:41:25.118634 - step 12 of 96 - 500 active elements (0 deactivated)
17:11:44 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:44 DEBUG   opendrift:2064: ======================================================================
17:11:44 DEBUG   opendrift:2075:                57.58415055278152 <- latitude  -> 57.70729994524702
17:11:44 DEBUG   opendrift:2080:                10.51820676031587 <- longitude -> 10.734619620779492
17:11:44 DEBUG   opendrift:2085:                -21.675376892089844   <- z ->   0.0
17:11:44 DEBUG   opendrift:2086: ---------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 22:00:00 (before)
                2025-02-08 23:00:00 (after)
17:11:44 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 22:00:00) in space  (linearNDFast)
17:11:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:44 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-08 23:00:00) in space  (linearNDFast)
17:11:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:44 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 22:00:00, weight 0.31) and
                      after (2025-02-08 23:00:00, weight 0.69) in time
17:11:44 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.265391423069545 degrees.
17:11:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.265391423069545 degrees.
17:11:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:44 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:44 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:44 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:44 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:44 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:44 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:44 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0858553 (min) 0.192006 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.00238061 (min) 0.350556 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.267463 (min) -0.237083 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.00477 (min) -5.6217 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: 0.390805 (min) 0.779279 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.2731 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.94334 (min) 6.35373 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.503 (min) 31.7414 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -9.63326e-05 (min) 0.000126116 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:44 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:44 DEBUG   opendrift:694: No elements hit coastline.
17:11:44 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:44 DEBUG   opendrift:1695: No elements to deactivate
17:11:44 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
17:11:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2 0 0 0 0 0 0 0 0]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0 3 3 3 3 3 3 3 3]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 119.   0.]
 [  0.   0.   0.   0.   0.]
 [ 12.   0.   0.  75.   0.]
 [  0.   0. 143.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:44 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:44 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.02626678748141955
17:11:44 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:44 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:44 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:44 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
17:11:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
17:11:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [342, 0, 103, 55, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:44 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:44 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:44 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:44 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:44 DEBUG   opendrift:2055: ======================================================================
17:11:44 INFO    opendrift:2056: 2025-02-08 23:11:25.118634 - step 13 of 96 - 500 active elements (0 deactivated)
17:11:44 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:44 DEBUG   opendrift:2064: ======================================================================
17:11:44 DEBUG   opendrift:2075:                57.58539473578543 <- latitude  -> 57.70850810932524
17:11:44 DEBUG   opendrift:2080:                10.51820676031587 <- longitude -> 10.739085465549415
17:11:44 DEBUG   opendrift:2085:                -23.2730770111084   <- z ->   0.0
17:11:44 DEBUG   opendrift:2086: ---------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 23:00:00 (before)
                2025-02-09 00:00:00 (after)
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:46 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:46 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 43x33x7) for time after (2025-02-09 00:00:00)
17:11:46 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 23:00:00) in space  (linearNDFast)
17:11:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:46 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 00:00:00) in space  (linearNDFast)
17:11:46 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:46 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 23:00:00, weight 0.81) and
                      after (2025-02-09 00:00:00, weight 0.19) in time
17:11:46 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.260925576151166 degrees.
17:11:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.260925576151166 degrees.
17:11:46 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:46 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:46 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:46 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:46 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:46 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:46 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:46 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:46 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:46 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:46 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:46 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:46 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:46 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:46 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:46 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.071273 (min) 0.177846 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0428113 (min) 0.318996 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.206917 (min) -0.181179 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.94956 (min) -5.58704 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -0.192948 (min) 0.241359 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.4798 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.87911 (min) 6.34838 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3711 (min) 31.7439 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -8.90966e-05 (min) 0.000132309 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:46 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:46 DEBUG   opendrift:694: No elements hit coastline.
17:11:46 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:47 DEBUG   opendrift:1695: No elements to deactivate
17:11:47 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:11:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 127.   0.]
 [  0.   0.   0.   0.   0.]
 [ 12.   0.   0.  80.   0.]
 [  0.   0. 144.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:47 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:47 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.025585343837939853
17:11:47 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:47 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:47 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 63 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 63 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 64 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 66 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 66 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 66 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 66 elements to seafloor.
17:11:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
17:11:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
17:11:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [334, 0, 101, 65, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:47 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:47 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:47 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:47 DEBUG   opendrift:738: Lifting 65 elements to seafloor.
17:11:47 DEBUG   opendrift:2055: ======================================================================
17:11:47 INFO    opendrift:2056: 2025-02-08 23:41:25.118634 - step 14 of 96 - 500 active elements (0 deactivated)
17:11:47 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:47 DEBUG   opendrift:2064: ======================================================================
17:11:47 DEBUG   opendrift:2075:                57.5882152360359 <- latitude  -> 57.710674069550045
17:11:47 DEBUG   opendrift:2080:                10.51820676031587 <- longitude -> 10.739085465549415
17:11:47 DEBUG   opendrift:2085:                -23.479848861694336   <- z ->   0.0
17:11:47 DEBUG   opendrift:2086: ---------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-08 23:00:00 (before)
                2025-02-09 00:00:00 (after)
17:11:47 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-08 23:00:00) in space  (linearNDFast)
17:11:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:47 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 00:00:00) in space  (linearNDFast)
17:11:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:47 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-08 23:00:00, weight 0.31) and
                      after (2025-02-09 00:00:00, weight 0.69) in time
17:11:47 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.260925576151166 degrees.
17:11:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.260925576151166 degrees.
17:11:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:47 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:47 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0613305 (min) 0.148992 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0500405 (min) 0.267986 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.166735 (min) -0.144939 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.93096 (min) -5.62696 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.06945 (min) -0.691274 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.549 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.85742 (min) 6.35227 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.2644 (min) 31.7494 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -6.84635e-05 (min) 0.000132952 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:47 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:47 DEBUG   opendrift:694: No elements hit coastline.
17:11:47 DEBUG   opendrift:738: Lifting 65 elements to seafloor.
17:11:47 DEBUG   opendrift:1695: No elements to deactivate
17:11:47 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:11:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 135.   0.]
 [  0.   0.   0.   0.   0.]
 [ 12.   0.   0.  83.   0.]
 [  0.   0. 145.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:47 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:47 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.026234001886281395
17:11:47 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:47 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:47 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:47 DEBUG   opendrift.models.oceandrift:535: 73 elements reached seafloor, interacting with bottom
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
17:11:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [326, 0, 101, 73, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:47 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:47 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:47 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:47 DEBUG   opendrift:738: Lifting 73 elements to seafloor.
17:11:47 DEBUG   opendrift:2055: ======================================================================
17:11:47 INFO    opendrift:2056: 2025-02-09 00:11:25.118634 - step 15 of 96 - 500 active elements (0 deactivated)
17:11:47 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:47 DEBUG   opendrift:2064: ======================================================================
17:11:47 DEBUG   opendrift:2075:                57.58821523603591 <- latitude  -> 57.71245663769473
17:11:47 DEBUG   opendrift:2080:                10.518206760315874 <- longitude -> 10.74006541130055
17:11:47 DEBUG   opendrift:2085:                -23.479846954345703   <- z ->   -0.08302401787284946
17:11:47 DEBUG   opendrift:2086: ---------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 00:00:00 (before)
                2025-02-09 01:00:00 (after)
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:49 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:49 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 44x33x7) for time after (2025-02-09 01:00:00)
17:11:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 00:00:00) in space  (linearNDFast)
17:11:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 01:00:00) in space  (linearNDFast)
17:11:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 00:00:00, weight 0.81) and
                      after (2025-02-09 01:00:00, weight 0.19) in time
17:11:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25994562102043 degrees.
17:11:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25994562102043 degrees.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.0494348 (min) 0.122999 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0342729 (min) 0.245241 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.144599 (min) -0.123027 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.8541 (min) -5.58782 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.71961 (min) -1.29175 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.7657 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.93536 (min) 6.35656 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5331 (min) 31.7545 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -4.65976e-05 (min) 0.000172952 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:49 DEBUG   opendrift:694: No elements hit coastline.
17:11:49 DEBUG   opendrift:738: Lifting 74 elements to seafloor.
17:11:49 DEBUG   opendrift:1695: No elements to deactivate
17:11:49 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 23
17:11:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 0 3 3 3 3 3 3]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 156.   0.]
 [  0.   0.   0.   0.   0.]
 [ 14.   0.   0.  83.   0.]
 [  0.   0. 145.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:49 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:49 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.02690532017716795
17:11:49 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:49 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:49 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 94 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 94 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 95 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 95 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 95 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 95 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 95 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 95 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 95 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 95 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 96 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 96 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 100 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 100 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 100 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 100 elements to seafloor.
17:11:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
17:11:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [307, 0, 93, 100, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:49 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:49 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:49 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:49 DEBUG   opendrift:738: Lifting 100 elements to seafloor.
17:11:49 DEBUG   opendrift:2055: ======================================================================
17:11:49 INFO    opendrift:2056: 2025-02-09 00:41:25.118634 - step 16 of 96 - 500 active elements (0 deactivated)
17:11:49 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:49 DEBUG   opendrift:2064: ======================================================================
17:11:49 DEBUG   opendrift:2075:                57.588215236035914 <- latitude  -> 57.71399667786477
17:11:49 DEBUG   opendrift:2080:                10.518206760315874 <- longitude -> 10.743120583619852
17:11:49 DEBUG   opendrift:2085:                -23.479848861694336   <- z ->   0.0
17:11:49 DEBUG   opendrift:2086: ---------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 00:00:00 (before)
                2025-02-09 01:00:00 (after)
17:11:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 00:00:00) in space  (linearNDFast)
17:11:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 01:00:00) in space  (linearNDFast)
17:11:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 00:00:00, weight 0.31) and
                      after (2025-02-09 01:00:00, weight 0.69) in time
17:11:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25689045399668 degrees.
17:11:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25689045399668 degrees.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:49 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:49 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.09818 (min) 0.113254 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0354282 (min) 0.253395 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.147647 (min) -0.124429 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.70267 (min) -5.43698 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.82931 (min) -1.39508 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.917 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.86318 (min) 6.35967 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3642 (min) 31.7589 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -2.27254e-05 (min) 0.000202319 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:49 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:49 DEBUG   opendrift:694: No elements hit coastline.
17:11:49 DEBUG   opendrift:738: Lifting 100 elements to seafloor.
17:11:49 DEBUG   opendrift:1695: No elements to deactivate
17:11:49 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
17:11:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 173.   0.]
 [  0.   0.   0.   0.   0.]
 [ 14.   0.   0.  89.   0.]
 [  0.   0. 145.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:49 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:49 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.025755390096770074
17:11:49 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:49 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:49 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 118 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 118 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 120 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 120 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:49 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:49 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
17:11:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
17:11:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [290, 0, 106, 104, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:49 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:49 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:49 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:49 DEBUG   opendrift:738: Lifting 105 elements to seafloor.
17:11:49 DEBUG   opendrift:2055: ======================================================================
17:11:49 INFO    opendrift:2056: 2025-02-09 01:11:25.118634 - step 17 of 96 - 500 active elements (0 deactivated)
17:11:49 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:49 DEBUG   opendrift:2064: ======================================================================
17:11:49 DEBUG   opendrift:2075:                57.588215236035914 <- latitude  -> 57.71658029571684
17:11:49 DEBUG   opendrift:2080:                10.518206760315868 <- longitude -> 10.744404535126456
17:11:49 DEBUG   opendrift:2085:                -23.833229064941406   <- z ->   -0.1587995521007406
17:11:49 DEBUG   opendrift:2086: ---------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 01:00:00 (before)
                2025-02-09 02:00:00 (after)
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:51 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:51 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 44x33x7) for time after (2025-02-09 02:00:00)
17:11:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 01:00:00) in space  (linearNDFast)
17:11:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 02:00:00) in space  (linearNDFast)
17:11:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 01:00:00, weight 0.81) and
                      after (2025-02-09 02:00:00, weight 0.19) in time
17:11:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25560649760685 degrees.
17:11:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25560649760685 degrees.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.116263 (min) 0.0867505 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0239823 (min) 0.238264 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.163333 (min) -0.136893 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.64886 (min) -5.37353 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.83563 (min) -1.4484 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 24.0491 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.91819 (min) 6.36231 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5284 (min) 31.7634 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -1.25179e-05 (min) 0.000324902 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:51 DEBUG   opendrift:694: No elements hit coastline.
17:11:51 DEBUG   opendrift:738: Lifting 105 elements to seafloor.
17:11:51 DEBUG   opendrift:1695: No elements to deactivate
17:11:51 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
17:11:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 0 0 0 0 0]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 3 3]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 183.   0.]
 [  0.   0.   0.   0.   0.]
 [ 15.   0.   0.  93.   0.]
 [  0.   0. 162.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:51 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:51 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.025341735197900755
17:11:51 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:51 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:51 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 114 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 114 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 117 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 117 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 119 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 119 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 120 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 120 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 121 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 121 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 122 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 122 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 123 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 123 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 123 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 123 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 124 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 124 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 124 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 124 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 124 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 124 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 126 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 126 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 128 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 128 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 128 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 128 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 128 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 128 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 128 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 128 elements to seafloor.
17:11:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 45
17:11:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 45 elements
17:11:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [281, 0, 136, 83, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:51 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:51 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:51 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:51 DEBUG   opendrift:738: Lifting 84 elements to seafloor.
17:11:51 DEBUG   opendrift:2055: ======================================================================
17:11:51 INFO    opendrift:2056: 2025-02-09 01:41:25.118634 - step 18 of 96 - 500 active elements (0 deactivated)
17:11:51 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:51 DEBUG   opendrift:2064: ======================================================================
17:11:51 DEBUG   opendrift:2075:                57.588215236035914 <- latitude  -> 57.71950869738853
17:11:51 DEBUG   opendrift:2080:                10.518206760315868 <- longitude -> 10.745269434465879
17:11:51 DEBUG   opendrift:2085:                -23.479848861694336   <- z ->   -0.11685464759986008
17:11:51 DEBUG   opendrift:2086: ---------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 01:00:00 (before)
                2025-02-09 02:00:00 (after)
17:11:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 01:00:00) in space  (linearNDFast)
17:11:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 02:00:00) in space  (linearNDFast)
17:11:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 01:00:00, weight 0.31) and
                      after (2025-02-09 02:00:00, weight 0.69) in time
17:11:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25474160165916 degrees.
17:11:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25474160165916 degrees.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:51 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:51 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.112668 (min) 0.0750531 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.00264794 (min) 0.279806 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.197999 (min) -0.166235 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.71149 (min) -5.47449 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.6737 (min) -1.50506 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 24.1394 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.82599 (min) 6.3642 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.2843 (min) 31.7675 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -1.88471e-05 (min) 0.000413357 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:51 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:51 DEBUG   opendrift:694: No elements hit coastline.
17:11:51 DEBUG   opendrift:738: Lifting 85 elements to seafloor.
17:11:51 DEBUG   opendrift:1695: No elements to deactivate
17:11:51 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
17:11:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 0 0 3 3]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 197.   0.]
 [  0.   0.   0.   0.   0.]
 [ 17.   0.   0. 107.   0.]
 [  0.   0. 207.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:51 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:51 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.025531430218884796
17:11:51 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:51 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:51 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:51 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 97 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 97 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 98 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 98 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 99 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 99 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 100 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 100 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 101 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 101 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 101 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 101 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 102 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 102 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 103 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 103 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 104 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 104 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 104 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 104 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 105 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 105 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 105 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 105 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 105 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 105 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 106 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 106 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 106 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 106 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 107 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 107 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 107 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 107 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 109 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 109 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 111 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 111 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 111 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 111 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 111 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 111 elements to seafloor.
17:11:51 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:51 DEBUG   opendrift.models.oceandrift:535: 112 elements reached seafloor, interacting with bottom
17:11:51 DEBUG   opendrift:738: Lifting 112 elements to seafloor.
17:11:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 51
17:11:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 51 elements
17:11:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [269, 0, 170, 61, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:51 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:51 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:51 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:51 DEBUG   opendrift:738: Lifting 64 elements to seafloor.
17:11:51 DEBUG   opendrift:2055: ======================================================================
17:11:51 INFO    opendrift:2056: 2025-02-09 02:11:25.118634 - step 19 of 96 - 500 active elements (0 deactivated)
17:11:51 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:51 DEBUG   opendrift:2064: ======================================================================
17:11:51 DEBUG   opendrift:2075:                57.58821523603592 <- latitude  -> 57.724030886184515
17:11:51 DEBUG   opendrift:2080:                10.518206760315868 <- longitude -> 10.745485990653874
17:11:51 DEBUG   opendrift:2085:                -23.479846954345703   <- z ->   -0.10787180059047896
17:11:51 DEBUG   opendrift:2086: ---------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 02:00:00 (before)
                2025-02-09 03:00:00 (after)
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:53 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:53 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 45x33x7) for time after (2025-02-09 03:00:00)
17:11:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 02:00:00) in space  (linearNDFast)
17:11:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 03:00:00) in space  (linearNDFast)
17:11:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 02:00:00, weight 0.81) and
                      after (2025-02-09 03:00:00, weight 0.19) in time
17:11:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25452504053287 degrees.
17:11:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25452504053287 degrees.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.161303 (min) 0.0919509 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0357918 (min) 0.472239 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.241168 (min) -0.200658 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.70084 (min) -5.49086 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.68667 (min) -1.54741 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 24.2017 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.89823 (min) 6.36656 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5932 (min) 31.7708 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -3.36773e-05 (min) 0.000383488 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:53 DEBUG   opendrift:694: No elements hit coastline.
17:11:53 DEBUG   opendrift:738: Lifting 65 elements to seafloor.
17:11:53 DEBUG   opendrift:1695: No elements to deactivate
17:11:53 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
17:11:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 2 0 0 0 0 0 0]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 0 3 3 3 3 3 3]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 209.   0.]
 [  0.   0.   0.   0.   0.]
 [ 19.   0.   0. 122.   0.]
 [  0.   0. 258.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:53 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:53 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.025519627898899132
17:11:53 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:53 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:53 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:53 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 74 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 74 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 75 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 75 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 75 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 75 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 75 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 75 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 75 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 75 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 76 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 76 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 77 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 77 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 77 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 77 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 77 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 77 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 77 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 77 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 79 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 79 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 80 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 80 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 82 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 82 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 83 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 83 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 85 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 85 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 86 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 86 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 86 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 86 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 86 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 86 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 86 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 86 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 86 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 86 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 87 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 87 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 87 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 87 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 87 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 87 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 87 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 87 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 87 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 87 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 88 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 88 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 88 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 88 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 88 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 88 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 88 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 88 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 88 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 88 elements to seafloor.
17:11:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 49
17:11:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 49 elements
17:11:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [259, 0, 202, 39, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:53 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:53 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:53 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:53 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:11:53 DEBUG   opendrift:2055: ======================================================================
17:11:53 INFO    opendrift:2056: 2025-02-09 02:41:25.118634 - step 20 of 96 - 500 active elements (0 deactivated)
17:11:53 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:53 DEBUG   opendrift:2064: ======================================================================
17:11:53 DEBUG   opendrift:2075:                57.58821523603592 <- latitude  -> 57.73166316382447
17:11:53 DEBUG   opendrift:2080:                10.518206760315868 <- longitude -> 10.740616731009169
17:11:53 DEBUG   opendrift:2085:                -22.74304073158801   <- z ->   -0.06474549879642333
17:11:53 DEBUG   opendrift:2086: ---------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 02:00:00 (before)
                2025-02-09 03:00:00 (after)
17:11:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 02:00:00) in space  (linearNDFast)
17:11:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 03:00:00) in space  (linearNDFast)
17:11:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 02:00:00, weight 0.31) and
                      after (2025-02-09 03:00:00, weight 0.69) in time
17:11:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25939429012512 degrees.
17:11:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.25939429012512 degrees.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:53 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:53 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:53 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.145951 (min) 0.168559 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0531096 (min) 0.607988 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.297852 (min) -0.243642 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.56631 (min) -5.38559 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -1.98935 (min) -1.55863 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.9739 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.88833 (min) 6.36967 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.6517 (min) 31.7747 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -5.21323e-05 (min) 0.000327234 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:53 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:53 DEBUG   opendrift:694: No elements hit coastline.
17:11:53 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:11:53 DEBUG   opendrift:1695: No elements to deactivate
17:11:53 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
17:11:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 0 2 0 0 0 0 0 0]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 3 0 3 3 3 3 3 3]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 222.   0.]
 [  0.   0.   0.   0.   0.]
 [ 21.   0.   0. 137.   0.]
 [  0.   0. 307.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:53 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:53 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.02521980554663398
17:11:53 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:53 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:53 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:53 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 39 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 35 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 57 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 57 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:11:53 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:53 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:11:53 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:11:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 40
17:11:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 40 elements
17:11:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [248, 0, 231, 21, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:53 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:53 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:53 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:53 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:53 DEBUG   opendrift:2055: ======================================================================
17:11:53 INFO    opendrift:2056: 2025-02-09 03:11:25.118634 - step 21 of 96 - 500 active elements (0 deactivated)
17:11:53 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:53 DEBUG   opendrift:2064: ======================================================================
17:11:53 DEBUG   opendrift:2075:                57.59054793133379 <- latitude  -> 57.741489362596916
17:11:53 DEBUG   opendrift:2080:                10.518206760315868 <- longitude -> 10.736352498306076
17:11:53 DEBUG   opendrift:2085:                -21.829037926880957   <- z ->   0.0
17:11:53 DEBUG   opendrift:2086: ---------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 03:00:00 (before)
                2025-02-09 04:00:00 (after)
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:55 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:55 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 47x32x7) for time after (2025-02-09 04:00:00)
17:11:55 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 03:00:00) in space  (linearNDFast)
17:11:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:55 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 04:00:00) in space  (linearNDFast)
17:11:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:55 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 03:00:00, weight 0.81) and
                      after (2025-02-09 04:00:00, weight 0.19) in time
17:11:55 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.26365852266074 degrees.
17:11:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.26365852266074 degrees.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.227177 (min) 0.285052 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0740331 (min) 0.723468 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.353759 (min) -0.287584 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.43339 (min) -5.22193 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.16819 (min) -1.61416 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 23.7925 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.87893 (min) 6.3719 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5707 (min) 31.7738 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000102712 (min) 0.000295214 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:55 DEBUG   opendrift:694: No elements hit coastline.
17:11:55 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:55 DEBUG   opendrift:1695: No elements to deactivate
17:11:55 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
17:11:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 0 0 3 3 3 3 3 3 3]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 236.   0.]
 [  0.   0.   0.   0.   0.]
 [ 23.   0.   0. 146.   0.]
 [  0.   0. 347.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:55 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:55 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.024686900613868242
17:11:55 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:55 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:55 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:55 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 37 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 37 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 43 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 43 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 46 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 46 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:11:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 43
17:11:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 43 elements
17:11:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 258, 6, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:55 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:55 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:55 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:11:55 DEBUG   opendrift:2055: ======================================================================
17:11:55 INFO    opendrift:2056: 2025-02-09 03:41:25.118634 - step 22 of 96 - 500 active elements (0 deactivated)
17:11:55 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:55 DEBUG   opendrift:2064: ======================================================================
17:11:55 DEBUG   opendrift:2075:                57.59314198686766 <- latitude  -> 57.7531817734712
17:11:55 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.734035373522817
17:11:55 DEBUG   opendrift:2085:                -21.595677660840025   <- z ->   -0.006520357771800676
17:11:55 DEBUG   opendrift:2086: ---------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 03:00:00 (before)
                2025-02-09 04:00:00 (after)
17:11:55 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 03:00:00) in space  (linearNDFast)
17:11:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:55 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 04:00:00) in space  (linearNDFast)
17:11:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:55 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 03:00:00, weight 0.31) and
                      after (2025-02-09 04:00:00, weight 0.69) in time
17:11:55 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.265975666116304 degrees.
17:11:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.265975666116304 degrees.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:55 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:55 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.350087 (min) 0.243458 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0988475 (min) 0.72463 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.397162 (min) -0.332435 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.33287 (min) -4.88325 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.15958 (min) -1.6926 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 26.5108 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.8458 (min) 6.37269 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5176 (min) 31.7729 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000561452 (min) 0.000283608 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:55 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:55 DEBUG   opendrift:694: No elements hit coastline.
17:11:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:11:55 DEBUG   opendrift:1695: No elements to deactivate
17:11:55 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
17:11:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 0 0 0 2 0 2 0]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3 3 3 0 3 0 3]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 242.   0.]
 [  0.   0.   0.   0.   0.]
 [ 29.   0.   0. 160.   0.]
 [  0.   0. 390.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:55 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:55 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.023751396410421968
17:11:55 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:55 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:55 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:55 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 40 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:55 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:55 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:11:55 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
17:11:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
17:11:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 260, 4, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:55 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:55 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:55 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:55 DEBUG   opendrift:2055: ======================================================================
17:11:55 INFO    opendrift:2056: 2025-02-09 04:11:25.118634 - step 23 of 96 - 500 active elements (0 deactivated)
17:11:55 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:55 DEBUG   opendrift:2064: ======================================================================
17:11:55 DEBUG   opendrift:2075:                57.59540991296635 <- latitude  -> 57.76436599298445
17:11:55 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.734156852225762
17:11:55 DEBUG   opendrift:2085:                -22.28371863477937   <- z ->   0.0
17:11:55 DEBUG   opendrift:2086: ---------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 04:00:00 (before)
                2025-02-09 05:00:00 (after)
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:11:58 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:11:58 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x32x7) for time after (2025-02-09 05:00:00)
17:11:58 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 04:00:00) in space  (linearNDFast)
17:11:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:58 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 05:00:00) in space  (linearNDFast)
17:11:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:58 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 04:00:00, weight 0.81) and
                      after (2025-02-09 05:00:00, weight 0.19) in time
17:11:58 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.2658541949115 degrees.
17:11:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180432498076 and -59.2658541949115 degrees.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:58 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.452991 (min) 0.334228 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.115629 (min) 0.781099 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.442051 (min) -0.376115 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.18337 (min) -4.74032 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.36924 (min) -1.86392 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 35.9233 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.80149 (min) 6.3703 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3445 (min) 31.7673 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000742787 (min) 0.000303604 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:58 DEBUG   opendrift:694: No elements hit coastline.
17:11:58 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:58 DEBUG   opendrift:1695: No elements to deactivate
17:11:58 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
17:11:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 0 0 0 2]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 0]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 250.   0.]
 [  0.   0.   0.   0.   0.]
 [ 31.   0.   0. 175.   0.]
 [  0.   0. 413.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:58 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:58 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.022990568661038106
17:11:58 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:58 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:58 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:58 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:11:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 26
17:11:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 26 elements
17:11:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [230, 0, 268, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:58 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:58 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:58 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:58 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:11:58 DEBUG   opendrift:2055: ======================================================================
17:11:58 INFO    opendrift:2056: 2025-02-09 04:41:25.118634 - step 24 of 96 - 500 active elements (0 deactivated)
17:11:58 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:58 DEBUG   opendrift:2064: ======================================================================
17:11:58 DEBUG   opendrift:2075:                57.59795490579071 <- latitude  -> 57.77272119473986
17:11:58 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.73544440031901
17:11:58 DEBUG   opendrift:2085:                -21.62394124940568   <- z ->   -0.09156485368137679
17:11:58 DEBUG   opendrift:2086: ---------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 04:00:00 (before)
                2025-02-09 05:00:00 (after)
17:11:58 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 04:00:00) in space  (linearNDFast)
17:11:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 05:00:00) in space  (linearNDFast)
17:11:58 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:11:58 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 04:00:00, weight 0.31) and
                      after (2025-02-09 05:00:00, weight 0.69) in time
17:11:58 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:11:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180431614966 and -59.26456663388453 degrees.
17:11:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48180431614966 and -59.26456663388453 degrees.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:11:58 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:11:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:11:58 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:11:58 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:11:58 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:11:58 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.579523 (min) 0.400717 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.127904 (min) 0.792266 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.484233 (min) -0.418121 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -4.99322 (min) -4.8761 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.90202 (min) -2.30697 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 46.075 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.79626 (min) 6.34471 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3596 (min) 32.7169 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00154509 (min) 0.000831707 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:11:58 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:11:58 DEBUG   opendrift:694: No elements hit coastline.
17:11:58 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:58 DEBUG   opendrift:1695: No elements to deactivate
17:11:58 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:11:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:11:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:11:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:11:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 0 0]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 3 3]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 255.   0.]
 [  0.   0.   0.   0.   0.]
 [ 33.   0.   0. 191.   0.]
 [  0.   0. 439.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:11:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:11:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:11:58 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:11:58 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.023878586443614753
17:11:58 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:11:58 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:11:58 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:11:58 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:11:58 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:11:58 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:11:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
17:11:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:11:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
17:11:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:11:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [227, 0, 271, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:11:58 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:11:58 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:11:58 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:11:58 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:11:58 DEBUG   opendrift:2055: ======================================================================
17:11:58 INFO    opendrift:2056: 2025-02-09 05:11:25.118634 - step 25 of 96 - 500 active elements (0 deactivated)
17:11:58 DEBUG   opendrift:2062: 0 elements scheduled.
17:11:58 DEBUG   opendrift:2064: ======================================================================
17:11:58 DEBUG   opendrift:2075:                57.60104946409316 <- latitude  -> 57.775397781571236
17:11:58 DEBUG   opendrift:2080:                10.518206760315872 <- longitude -> 10.73493782433459
17:11:58 DEBUG   opendrift:2085:                -27.43136355062706   <- z ->   -0.11614808987173397
17:11:58 DEBUG   opendrift:2086: ---------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:11:58 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:11:58 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:11:58 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:11:58 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 05:00:00 (before)
                2025-02-09 06:00:00 (after)
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:00 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:00 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 47x34x7) for time after (2025-02-09 06:00:00)
17:12:00 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 05:00:00) in space  (linearNDFast)
17:12:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:00 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 06:00:00) in space  (linearNDFast)
17:12:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:00 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 05:00:00, weight 0.81) and
                      after (2025-02-09 06:00:00, weight 0.19) in time
17:12:00 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.481804309505726 and -59.26507320269394 degrees.
17:12:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.481804309505726 and -59.26507320269394 degrees.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:00 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.569185 (min) 0.507211 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.010407 (min) 0.794029 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.51836 (min) -0.458225 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.16017 (min) -4.89517 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.42669 (min) -2.85119 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22899 (min) 50.8404 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.79922 (min) 6.56303 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3727 (min) 33.9163 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00187751 (min) 0.00134153 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:00 DEBUG   opendrift:694: No elements hit coastline.
17:12:00 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:00 DEBUG   opendrift:1695: No elements to deactivate
17:12:00 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
17:12:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 264.   0.]
 [  0.   0.   0.   0.   0.]
 [ 33.   0.   0. 210.   0.]
 [  0.   0. 463.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:00 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:00 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.02773059466606072
17:12:00 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:00 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:00 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:00 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 27
17:12:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 27 elements
17:12:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [218, 0, 281, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:00 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:00 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:00 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:00 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:00 DEBUG   opendrift:2055: ======================================================================
17:12:00 INFO    opendrift:2056: 2025-02-09 05:41:25.118634 - step 26 of 96 - 500 active elements (0 deactivated)
17:12:00 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:00 DEBUG   opendrift:2064: ======================================================================
17:12:00 DEBUG   opendrift:2075:                57.60440443193464 <- latitude  -> 57.780260249738284
17:12:00 DEBUG   opendrift:2080:                10.519685996713012 <- longitude -> 10.734118274520805
17:12:00 DEBUG   opendrift:2085:                -26.433717727661133   <- z ->   -0.11542554080224066
17:12:00 DEBUG   opendrift:2086: ---------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 05:00:00 (before)
                2025-02-09 06:00:00 (after)
17:12:00 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 05:00:00) in space  (linearNDFast)
17:12:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:00 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 06:00:00) in space  (linearNDFast)
17:12:00 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:00 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 05:00:00, weight 0.31) and
                      after (2025-02-09 06:00:00, weight 0.69) in time
17:12:00 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.480325083582066 and -59.26589275953392 degrees.
17:12:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.480325083582066 and -59.26589275953392 degrees.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:00 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:00 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:00 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:00 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:00 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:00 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.578851 (min) 0.403532 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.138053 (min) 0.773307 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.554039 (min) -0.495183 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.29152 (min) -4.96966 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.11365 (min) -3.55421 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22772 (min) 57.0565 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.82887 (min) 6.34466 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.542 (min) 32.5834 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00176043 (min) 0.00160203 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:00 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:00 DEBUG   opendrift:694: No elements hit coastline.
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift:1695: No elements to deactivate
17:12:00 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
17:12:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 2 0]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 0 3]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 273.   0.]
 [  0.   0.   0.   0.   0.]
 [ 35.   0.   0. 227.   0.]
 [  0.   0. 490.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:00 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:00 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.031553298324629636
17:12:00 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:00 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:00 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:00 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 33 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:00 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:00 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:00 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 27
17:12:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 27 elements
17:12:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [211, 0, 288, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:00 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:00 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:00 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:00 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:00 DEBUG   opendrift:2055: ======================================================================
17:12:00 INFO    opendrift:2056: 2025-02-09 06:11:25.118634 - step 27 of 96 - 500 active elements (0 deactivated)
17:12:00 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:00 DEBUG   opendrift:2064: ======================================================================
17:12:00 DEBUG   opendrift:2075:                57.6074504905715 <- latitude  -> 57.78602203798889
17:12:00 DEBUG   opendrift:2080:                10.521275692585956 <- longitude -> 10.735330422113982
17:12:00 DEBUG   opendrift:2085:                -32.73204383982261   <- z ->   -0.1766742035423296
17:12:00 DEBUG   opendrift:2086: ---------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:00 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:00 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:00 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:00 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 06:00:00 (before)
                2025-02-09 07:00:00 (after)
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:02 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:02 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x37x7) for time after (2025-02-09 07:00:00)
17:12:02 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 06:00:00) in space  (linearNDFast)
17:12:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:02 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 07:00:00) in space  (linearNDFast)
17:12:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:02 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 06:00:00, weight 0.81) and
                      after (2025-02-09 07:00:00, weight 0.19) in time
17:12:02 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.47873538970367 and -59.26468061714358 degrees.
17:12:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.47873538970367 and -59.26468061714358 degrees.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.631276 (min) 0.43035 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: 0.0856246 (min) 0.720315 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.581287 (min) -0.52944 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.51961 (min) -5.09521 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.58215 (min) -4.046 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.22796 (min) 66.3297 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.78997 (min) 6.45244 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3967 (min) 33.2415 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.0019775 (min) 0.00198007 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:02 DEBUG   opendrift:694: No elements hit coastline.
17:12:02 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:02 DEBUG   opendrift:1695: No elements to deactivate
17:12:02 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 275.   0.]
 [  0.   0.   0.   0.   0.]
 [ 36.   0.   0. 245.   0.]
 [  0.   0. 517.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:02 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:02 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.03571996211723479
17:12:02 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:02 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:02 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:02 DEBUG   opendrift.models.oceandrift:517: 37 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
17:12:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
17:12:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [210, 0, 289, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:02 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:02 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:02 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:02 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:02 DEBUG   opendrift:2055: ======================================================================
17:12:02 INFO    opendrift:2056: 2025-02-09 06:41:25.118634 - step 28 of 96 - 500 active elements (0 deactivated)
17:12:02 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:02 DEBUG   opendrift:2064: ======================================================================
17:12:02 DEBUG   opendrift:2075:                57.61039350767473 <- latitude  -> 57.7905097908203
17:12:02 DEBUG   opendrift:2080:                10.52296211749501 <- longitude -> 10.740196542179879
17:12:02 DEBUG   opendrift:2085:                -33.63798522949219   <- z ->   -0.3581604083888287
17:12:02 DEBUG   opendrift:2086: ---------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 06:00:00 (before)
                2025-02-09 07:00:00 (after)
17:12:02 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 06:00:00) in space  (linearNDFast)
17:12:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:02 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 07:00:00) in space  (linearNDFast)
17:12:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:02 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 06:00:00, weight 0.31) and
                      after (2025-02-09 07:00:00, weight 0.69) in time
17:12:02 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.47704895920721 and -59.259814481165805 degrees.
17:12:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.47704895920721 and -59.259814481165805 degrees.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:02 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:02 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.552896 (min) 0.435922 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0173916 (min) 0.658862 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.606311 (min) -0.558751 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -5.90678 (min) -5.341 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.61835 (min) -4.23384 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.23938 (min) 73.817 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.80529 (min) 6.56888 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5508 (min) 33.8766 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00189443 (min) 0.00212759 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:02 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:02 DEBUG   opendrift:694: No elements hit coastline.
17:12:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:02 DEBUG   opendrift:1695: No elements to deactivate
17:12:02 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:12:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 0 0]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 3 3]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 280.   0.]
 [  0.   0.   0.   0.   0.]
 [ 38.   0.   0. 262.   0.]
 [  0.   0. 536.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:02 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:02 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.03867759949852972
17:12:02 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:02 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:02 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:02 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 34 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:02 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:02 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:02 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 25
17:12:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 25 elements
17:12:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [207, 0, 292, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:02 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:02 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:02 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:02 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:02 DEBUG   opendrift:2055: ======================================================================
17:12:02 INFO    opendrift:2056: 2025-02-09 07:11:25.118634 - step 29 of 96 - 500 active elements (0 deactivated)
17:12:02 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:02 DEBUG   opendrift:2064: ======================================================================
17:12:02 DEBUG   opendrift:2075:                57.61315857959051 <- latitude  -> 57.79374384322225
17:12:02 DEBUG   opendrift:2080:                10.524193266327146 <- longitude -> 10.746698764168054
17:12:02 DEBUG   opendrift:2085:                -30.914418167598914   <- z ->   0.0
17:12:02 DEBUG   opendrift:2086: ---------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 07:00:00 (before)
                2025-02-09 08:00:00 (after)
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:04 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:04 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x39x7) for time after (2025-02-09 08:00:00)
17:12:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 07:00:00) in space  (linearNDFast)
17:12:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 08:00:00) in space  (linearNDFast)
17:12:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 07:00:00, weight 0.81) and
                      after (2025-02-09 08:00:00, weight 0.19) in time
17:12:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.25331226366355 degrees.
17:12:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.25331226366355 degrees.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.698189 (min) 0.423076 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.0604418 (min) 0.631903 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.622836 (min) -0.575617 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.26883 (min) -5.61471 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.70964 (min) -4.34741 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.2622 (min) 79.1031 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.77234 (min) 6.61482 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4755 (min) 34.0969 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00180339 (min) 0.0021609 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:04 DEBUG   opendrift:694: No elements hit coastline.
17:12:04 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:04 DEBUG   opendrift:1695: No elements to deactivate
17:12:04 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
17:12:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2 0 0 0]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0 3 3 3]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 287.   0.]
 [  0.   0.   0.   0.   0.]
 [ 40.   0.   0. 282.   0.]
 [  0.   0. 561.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:04 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:04 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.042059149523449676
17:12:04 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:04 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:04 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 36 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
17:12:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
17:12:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [202, 0, 297, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:04 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:04 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:04 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:04 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:04 DEBUG   opendrift:2055: ======================================================================
17:12:04 INFO    opendrift:2056: 2025-02-09 07:41:25.118634 - step 30 of 96 - 500 active elements (0 deactivated)
17:12:04 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:04 DEBUG   opendrift:2064: ======================================================================
17:12:04 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79449947242195
17:12:04 DEBUG   opendrift:2080:                10.524193266327142 <- longitude -> 10.753079791782483
17:12:04 DEBUG   opendrift:2085:                -35.75439823337259   <- z ->   0.0
17:12:04 DEBUG   opendrift:2086: ---------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 07:00:00 (before)
                2025-02-09 08:00:00 (after)
17:12:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 07:00:00) in space  (linearNDFast)
17:12:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 08:00:00) in space  (linearNDFast)
17:12:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 07:00:00, weight 0.31) and
                      after (2025-02-09 08:00:00, weight 0.69) in time
17:12:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.24693123216647 degrees.
17:12:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.24693123216647 degrees.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:04 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:04 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.738377 (min) 0.363526 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.115398 (min) 0.581153 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.616343 (min) -0.571803 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.60379 (min) -5.84778 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.92148 (min) -4.43816 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.27786 (min) 81.6141 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.72938 (min) 6.68045 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3179 (min) 34.4217 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00176389 (min) 0.00192263 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:04 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:04 DEBUG   opendrift:694: No elements hit coastline.
17:12:04 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:04 DEBUG   opendrift:1695: No elements to deactivate
17:12:04 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:12:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 2 0]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 0 3]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 293.   0.]
 [  0.   0.   0.   0.   0.]
 [ 42.   0.   0. 294.   0.]
 [  0.   0. 580.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:04 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:04 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.04607959941171555
17:12:04 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:04 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:04 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:04 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
17:12:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
17:12:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [198, 0, 301, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:04 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:04 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:04 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:04 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:04 DEBUG   opendrift:2055: ======================================================================
17:12:04 INFO    opendrift:2056: 2025-02-09 08:11:25.118634 - step 31 of 96 - 500 active elements (0 deactivated)
17:12:04 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:04 DEBUG   opendrift:2064: ======================================================================
17:12:04 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79576654506641
17:12:04 DEBUG   opendrift:2080:                10.524193266327142 <- longitude -> 10.75546778370347
17:12:04 DEBUG   opendrift:2085:                -35.09334265319369   <- z ->   0.0
17:12:04 DEBUG   opendrift:2086: ---------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 08:00:00 (before)
                2025-02-09 09:00:00 (after)
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:06 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:06 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 49x42x7) for time after (2025-02-09 09:00:00)
17:12:06 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 08:00:00) in space  (linearNDFast)
17:12:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:06 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 09:00:00) in space  (linearNDFast)
17:12:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:06 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 08:00:00, weight 0.81) and
                      after (2025-02-09 09:00:00, weight 0.19) in time
17:12:06 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.244543235657645 degrees.
17:12:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.475817799486016 and -59.244543235657645 degrees.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.748924 (min) 0.32489 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.138415 (min) 0.521978 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.597433 (min) -0.551094 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.91963 (min) -6.02705 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.15356 (min) -4.45366 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.29701 (min) 84.423 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.74471 (min) 6.74415 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4376 (min) 34.5036 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00143842 (min) 0.0017391 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:06 DEBUG   opendrift:694: No elements hit coastline.
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift:1695: No elements to deactivate
17:12:06 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 0 0]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3 3]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 296.   0.]
 [  0.   0.   0.   0.   0.]
 [ 45.   0.   0. 301.   0.]
 [  0.   0. 593.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:06 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:06 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.049502833550327016
17:12:06 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:06 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:06 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:06 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 29 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 31 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 30 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 27 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
17:12:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
17:12:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [198, 0, 301, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:06 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:06 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:06 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:06 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:06 DEBUG   opendrift:2055: ======================================================================
17:12:06 INFO    opendrift:2056: 2025-02-09 08:41:25.118634 - step 32 of 96 - 500 active elements (0 deactivated)
17:12:06 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:06 DEBUG   opendrift:2064: ======================================================================
17:12:06 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.797891476057465
17:12:06 DEBUG   opendrift:2080:                10.515619470073647 <- longitude -> 10.759371450383957
17:12:06 DEBUG   opendrift:2085:                -36.53619677830404   <- z ->   -0.07151822919200657
17:12:06 DEBUG   opendrift:2086: ---------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 08:00:00 (before)
                2025-02-09 09:00:00 (after)
17:12:06 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 08:00:00) in space  (linearNDFast)
17:12:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:06 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 09:00:00) in space  (linearNDFast)
17:12:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:06 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 08:00:00, weight 0.31) and
                      after (2025-02-09 09:00:00, weight 0.69) in time
17:12:06 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.484391561449115 and -59.24063957417437 degrees.
17:12:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.484391561449115 and -59.24063957417437 degrees.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:06 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:06 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.809109 (min) 0.276563 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.151553 (min) 0.448608 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.560645 (min) -0.508567 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.30919 (min) -6.26308 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.49777 (min) -4.25783 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.30588 (min) 88.0593 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.75666 (min) 6.78239 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3265 (min) 34.6125 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00101919 (min) 0.00160897 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:06 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:06 DEBUG   opendrift:694: No elements hit coastline.
17:12:06 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:06 DEBUG   opendrift:1695: No elements to deactivate
17:12:06 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:12:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2 0 2]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0 3 0]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 298.   0.]
 [  0.   0.   0.   0.   0.]
 [ 50.   0.   0. 312.   0.]
 [  0.   0. 607.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:06 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:06 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05320541868241307
17:12:06 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:06 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:06 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 28 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 32 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 26 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 24 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:06 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:06 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:06 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
17:12:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
17:12:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [201, 0, 297, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:06 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:06 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:06 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:06 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:06 DEBUG   opendrift:2055: ======================================================================
17:12:06 INFO    opendrift:2056: 2025-02-09 09:11:25.118634 - step 33 of 96 - 500 active elements (0 deactivated)
17:12:06 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:06 DEBUG   opendrift:2064: ======================================================================
17:12:06 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79692868928738
17:12:06 DEBUG   opendrift:2080:                10.491140375357089 <- longitude -> 10.75831041350144
17:12:06 DEBUG   opendrift:2085:                -36.31811887112593   <- z ->   0.0
17:12:06 DEBUG   opendrift:2086: ---------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 09:00:00 (before)
                2025-02-09 10:00:00 (after)
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:08 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:08 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x44x7) for time after (2025-02-09 10:00:00)
17:12:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 09:00:00) in space  (linearNDFast)
17:12:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 10:00:00) in space  (linearNDFast)
17:12:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 09:00:00, weight 0.81) and
                      after (2025-02-09 10:00:00, weight 0.19) in time
17:12:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.50887065666336 and -59.24170060266454 degrees.
17:12:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.50887065666336 and -59.24170060266454 degrees.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.811781 (min) 0.229946 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.143234 (min) 0.383733 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.51035 (min) -0.456648 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.52084 (min) -6.43028 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.65645 (min) -4.24641 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.29919 (min) 88.484 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.70278 (min) 6.79468 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.2772 (min) 34.6801 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000799142 (min) 0.0015143 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:08 DEBUG   opendrift:694: No elements hit coastline.
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift:1695: No elements to deactivate
17:12:08 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 300.   0.]
 [  0.   0.   0.   0.   0.]
 [ 53.   0.   0. 318.   0.]
 [  0.   0. 614.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:08 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:08 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05576288574790336
17:12:08 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:08 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:08 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [202, 0, 295, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:08 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:08 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:08 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift:2055: ======================================================================
17:12:08 INFO    opendrift:2056: 2025-02-09 09:41:25.118634 - step 34 of 96 - 500 active elements (0 deactivated)
17:12:08 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:08 DEBUG   opendrift:2064: ======================================================================
17:12:08 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79599672005915
17:12:08 DEBUG   opendrift:2080:                10.4775808529227 <- longitude -> 10.758576736332179
17:12:08 DEBUG   opendrift:2085:                -36.04525101767125   <- z ->   0.0
17:12:08 DEBUG   opendrift:2086: ---------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 09:00:00 (before)
                2025-02-09 10:00:00 (after)
17:12:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 09:00:00) in space  (linearNDFast)
17:12:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 10:00:00) in space  (linearNDFast)
17:12:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 09:00:00, weight 0.31) and
                      after (2025-02-09 10:00:00, weight 0.69) in time
17:12:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.522430168982794 and -59.24143427952442 degrees.
17:12:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.522430168982794 and -59.24143427952442 degrees.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:08 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:08 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.794689 (min) 0.19525 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.161908 (min) 0.328328 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.438501 (min) -0.384472 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.23166 (min) -6.48102 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.53642 (min) -4.40872 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.26623 (min) 88.8208 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71739 (min) 6.81131 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3248 (min) 34.7064 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000561848 (min) 0.00138011 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:08 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:08 DEBUG   opendrift:694: No elements hit coastline.
17:12:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:08 DEBUG   opendrift:1695: No elements to deactivate
17:12:08 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:12:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 2 0]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 0 3]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 302.   0.]
 [  0.   0.   0.   0.   0.]
 [ 58.   0.   0. 325.   0.]
 [  0.   0. 622.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:08 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:08 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.0545589890915854
17:12:08 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:08 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:08 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [205, 0, 288, 7, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:08 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:08 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:08 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:08 DEBUG   opendrift:2055: ======================================================================
17:12:08 INFO    opendrift:2056: 2025-02-09 10:11:25.118634 - step 35 of 96 - 500 active elements (0 deactivated)
17:12:08 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:08 DEBUG   opendrift:2064: ======================================================================
17:12:08 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79505657386433
17:12:08 DEBUG   opendrift:2080:                10.46510611536382 <- longitude -> 10.756341957641629
17:12:08 DEBUG   opendrift:2085:                -34.95554191573045   <- z ->   0.0
17:12:08 DEBUG   opendrift:2086: ---------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 10:00:00 (before)
                2025-02-09 11:00:00 (after)
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:09 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:09 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x45x7) for time after (2025-02-09 11:00:00)
17:12:09 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 10:00:00) in space  (linearNDFast)
17:12:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:09 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 11:00:00) in space  (linearNDFast)
17:12:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:09 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 10:00:00, weight 0.81) and
                      after (2025-02-09 11:00:00, weight 0.19) in time
17:12:09 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.53490491690373 and -59.2436690610057 degrees.
17:12:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.53490491690373 and -59.2436690610057 degrees.
17:12:09 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:09 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:09 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:09 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:09 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:09 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:09 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:09 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:09 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:09 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:09 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:09 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:09 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:09 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:09 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:09 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.809433 (min) 0.166519 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.161316 (min) 0.269277 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.363121 (min) -0.312132 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.00068 (min) -6.49679 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.60954 (min) -4.49575 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.21177 (min) 88.8713 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71507 (min) 6.82342 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3323 (min) 34.7186 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000353883 (min) 0.00128793 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:09 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:09 DEBUG   opendrift:694: No elements hit coastline.
17:12:09 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:09 DEBUG   opendrift:1695: No elements to deactivate
17:12:09 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 0]
17:12:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3]
17:12:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 304.   0.]
 [  0.   0.   0.   0.   0.]
 [ 62.   0.   0. 330.   0.]
 [  0.   0. 625.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:09 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:09 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05471659578282081
17:12:09 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:09 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:09 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:09 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 25 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:09 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:09 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:09 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [207, 0, 279, 14, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:09 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:09 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:09 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:09 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:09 DEBUG   opendrift:2055: ======================================================================
17:12:09 INFO    opendrift:2056: 2025-02-09 10:41:25.118634 - step 36 of 96 - 500 active elements (0 deactivated)
17:12:09 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:09 DEBUG   opendrift:2064: ======================================================================
17:12:09 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.79762337128977
17:12:09 DEBUG   opendrift:2080:                10.45238606105195 <- longitude -> 10.754472021081115
17:12:09 DEBUG   opendrift:2085:                -38.03215489999611   <- z ->   0.0
17:12:09 DEBUG   opendrift:2086: ---------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:09 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:09 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:09 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 10:00:00 (before)
                2025-02-09 11:00:00 (after)
17:12:09 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 10:00:00) in space  (linearNDFast)
17:12:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:09 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 11:00:00) in space  (linearNDFast)
17:12:09 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:10 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 10:00:00, weight 0.31) and
                      after (2025-02-09 11:00:00, weight 0.69) in time
17:12:10 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.54762498248495 and -59.245538993513094 degrees.
17:12:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.54762498248495 and -59.245538993513094 degrees.
17:12:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:10 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:10 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.778562 (min) 0.128956 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.169933 (min) 0.247477 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.298069 (min) -0.240251 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.91331 (min) -6.31635 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.38288 (min) -4.58551 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.14069 (min) 88.5966 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.72492 (min) 6.86319 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3623 (min) 34.7577 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000228942 (min) 0.00115419 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:10 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:10 DEBUG   opendrift:694: No elements hit coastline.
17:12:10 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:10 DEBUG   opendrift:1695: No elements to deactivate
17:12:10 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2]
17:12:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0]
17:12:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 306.   0.]
 [  0.   0.   0.   0.   0.]
 [ 63.   0.   0. 339.   0.]
 [  0.   0. 629.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:10 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:10 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.055202143156421815
17:12:10 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:10 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:10 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:10 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:10 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
17:12:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [206, 0, 274, 20, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:10 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:10 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:10 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:10 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:10 DEBUG   opendrift:2055: ======================================================================
17:12:10 INFO    opendrift:2056: 2025-02-09 11:11:25.118634 - step 37 of 96 - 500 active elements (0 deactivated)
17:12:10 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:10 DEBUG   opendrift:2064: ======================================================================
17:12:10 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.79962350988771
17:12:10 DEBUG   opendrift:2080:                10.441007713404817 <- longitude -> 10.755400383411692
17:12:10 DEBUG   opendrift:2085:                -37.23849860322188   <- z ->   0.0
17:12:10 DEBUG   opendrift:2086: ---------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 11:00:00 (before)
                2025-02-09 12:00:00 (after)
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:11 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:11 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x47x7) for time after (2025-02-09 12:00:00)
17:12:11 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 11:00:00) in space  (linearNDFast)
17:12:11 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:11 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 12:00:00) in space  (linearNDFast)
17:12:11 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:11 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 11:00:00, weight 0.81) and
                      after (2025-02-09 12:00:00, weight 0.19) in time
17:12:11 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.55900332384705 and -59.24461064152076 degrees.
17:12:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.55900332384705 and -59.24461064152076 degrees.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:11 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.808893 (min) 0.122875 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.192977 (min) 0.253443 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.243068 (min) -0.179327 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.99041 (min) -6.19652 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.37523 (min) -4.65794 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 9.02443 (min) 88.9931 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71604 (min) 6.85757 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3455 (min) 34.7559 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000208632 (min) 0.00116474 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:11 DEBUG   opendrift:694: No elements hit coastline.
17:12:11 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:11 DEBUG   opendrift:1695: No elements to deactivate
17:12:11 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 308.   0.]
 [  0.   0.   0.   0.   0.]
 [ 64.   0.   0. 343.   0.]
 [  0.   0. 629.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:11 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:11 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05502694772508215
17:12:11 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:11 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:11 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 24 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 24 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 27 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 27 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 32 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 32 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 33 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 33 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:11 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:11 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:11 INFO    opendrift.models.chemicaldrift:1861: partitioning: [205, 0, 262, 33, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:11 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:11 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:11 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:11 DEBUG   opendrift:738: Lifting 33 elements to seafloor.
17:12:11 DEBUG   opendrift:2055: ======================================================================
17:12:11 INFO    opendrift:2056: 2025-02-09 11:41:25.118634 - step 38 of 96 - 500 active elements (0 deactivated)
17:12:11 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:11 DEBUG   opendrift:2064: ======================================================================
17:12:11 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.80120904368075
17:12:11 DEBUG   opendrift:2080:                10.429049079580848 <- longitude -> 10.755400383411688
17:12:11 DEBUG   opendrift:2085:                -36.41677926652832   <- z ->   0.0
17:12:11 DEBUG   opendrift:2086: ---------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 11:00:00 (before)
                2025-02-09 12:00:00 (after)
17:12:11 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 11:00:00) in space  (linearNDFast)
17:12:11 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:11 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 12:00:00) in space  (linearNDFast)
17:12:11 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:11 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 11:00:00, weight 0.31) and
                      after (2025-02-09 12:00:00, weight 0.69) in time
17:12:11 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5709619644238 and -59.24461064152076 degrees.
17:12:11 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5709619644238 and -59.24461064152076 degrees.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:11 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:11 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:11 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:11 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:11 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:11 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.825577 (min) 0.0683662 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.191857 (min) 0.282463 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.205971 (min) -0.131746 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.76752 (min) -6.0785 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.49982 (min) -4.5822 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 88.9739 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.72164 (min) 6.8715 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3353 (min) 34.7668 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000177456 (min) 0.000956745 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:11 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:11 DEBUG   opendrift:694: No elements hit coastline.
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift:1695: No elements to deactivate
17:12:11 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:11 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:11 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:11 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:11 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 309.   0.]
 [  0.   0.   0.   0.   0.]
 [ 68.   0.   0. 357.   0.]
 [  0.   0. 632.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:11 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:11 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:11 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05403621304187048
17:12:11 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:11 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:11 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:11 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 34 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 35 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 37 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 37 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 38 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 38 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 43 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:11 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:11 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:11 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:11 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:11 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:11 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:11 INFO    opendrift.models.chemicaldrift:1861: partitioning: [208, 0, 252, 40, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:11 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:11 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:11 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:11 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:11 DEBUG   opendrift:2055: ======================================================================
17:12:11 INFO    opendrift:2056: 2025-02-09 12:11:25.118634 - step 39 of 96 - 500 active elements (0 deactivated)
17:12:11 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:11 DEBUG   opendrift:2064: ======================================================================
17:12:11 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.80481429541241
17:12:11 DEBUG   opendrift:2080:                10.417957678255686 <- longitude -> 10.755400383411692
17:12:11 DEBUG   opendrift:2085:                -37.275125380774924   <- z ->   0.0
17:12:11 DEBUG   opendrift:2086: ---------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:11 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:11 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:11 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:11 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 12:00:00 (before)
                2025-02-09 13:00:00 (after)
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:13 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:13 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x50x7) for time after (2025-02-09 13:00:00)
17:12:13 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 12:00:00) in space  (linearNDFast)
17:12:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 13:00:00) in space  (linearNDFast)
17:12:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:13 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 12:00:00, weight 0.81) and
                      after (2025-02-09 13:00:00, weight 0.19) in time
17:12:13 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.58205336751763 and -59.244610623912216 degrees.
17:12:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.58205336751763 and -59.244610623912216 degrees.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:13 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.81598 (min) 0.0814359 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.21163 (min) 0.352848 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.18327 (min) -0.0984394 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.69497 (min) -5.97036 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.6007 (min) -4.54208 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.5949 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.7279 (min) 6.88058 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3851 (min) 34.7766 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000176957 (min) 0.000941523 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:13 DEBUG   opendrift:694: No elements hit coastline.
17:12:13 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:13 DEBUG   opendrift:1695: No elements to deactivate
17:12:13 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:13 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:13 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:13 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:13 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 314.   0.]
 [  0.   0.   0.   0.   0.]
 [ 69.   0.   0. 367.   0.]
 [  0.   0. 636.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:13 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:13 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:13 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.053870486297997615
17:12:13 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:13 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:13 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 46 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 46 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 50 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 50 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 50 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 50 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 51 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 51 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 52 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:13 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:13 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:13 INFO    opendrift.models.chemicaldrift:1861: partitioning: [204, 0, 245, 51, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:13 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:13 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:13 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:13 DEBUG   opendrift:738: Lifting 52 elements to seafloor.
17:12:13 DEBUG   opendrift:2055: ======================================================================
17:12:13 INFO    opendrift:2056: 2025-02-09 12:41:25.118634 - step 40 of 96 - 500 active elements (0 deactivated)
17:12:13 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:13 DEBUG   opendrift:2064: ======================================================================
17:12:13 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.80779803861472
17:12:13 DEBUG   opendrift:2080:                10.406872734942027 <- longitude -> 10.755400383411688
17:12:13 DEBUG   opendrift:2085:                -38.34838479555436   <- z ->   0.0
17:12:13 DEBUG   opendrift:2086: ---------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 12:00:00 (before)
                2025-02-09 13:00:00 (after)
17:12:13 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 12:00:00) in space  (linearNDFast)
17:12:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:13 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 13:00:00) in space  (linearNDFast)
17:12:13 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:13 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 12:00:00, weight 0.31) and
                      after (2025-02-09 13:00:00, weight 0.69) in time
17:12:13 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.593138317449174 and -59.24461064152076 degrees.
17:12:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.593138317449174 and -59.24461064152076 degrees.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:13 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:13 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:13 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:13 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:13 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.832099 (min) 0.0583825 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.244309 (min) 0.430589 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.183266 (min) -0.0848716 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.70068 (min) -5.87675 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.79924 (min) -4.6323 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.2284 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71817 (min) 6.88462 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3405 (min) 34.7786 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000195888 (min) 0.00104423 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:13 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:13 DEBUG   opendrift:694: No elements hit coastline.
17:12:13 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:13 DEBUG   opendrift:1695: No elements to deactivate
17:12:13 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:13 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:13 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:13 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:13 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 318.   0.]
 [  0.   0.   0.   0.   0.]
 [ 69.   0.   0. 377.   0.]
 [  0.   0. 640.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:13 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:13 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:13 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05675160100932867
17:12:13 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:13 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:13 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 56 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 56 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 57 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 57 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 57 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 57 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 58 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 58 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 59 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 59 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 60 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 60 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:13 DEBUG   opendrift.models.oceandrift:535: 61 elements reached seafloor, interacting with bottom
17:12:13 DEBUG   opendrift:738: Lifting 61 elements to seafloor.
17:12:13 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
17:12:13 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
17:12:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:13 INFO    opendrift.models.chemicaldrift:1861: partitioning: [200, 0, 248, 52, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:13 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:13 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:13 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:13 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:13 DEBUG   opendrift:2055: ======================================================================
17:12:13 INFO    opendrift:2056: 2025-02-09 13:11:25.118634 - step 41 of 96 - 500 active elements (0 deactivated)
17:12:13 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:13 DEBUG   opendrift:2064: ======================================================================
17:12:13 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.80832475693806
17:12:13 DEBUG   opendrift:2080:                10.395336086451119 <- longitude -> 10.755400383411688
17:12:13 DEBUG   opendrift:2085:                -37.91543772054628   <- z ->   0.0
17:12:13 DEBUG   opendrift:2086: ---------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:13 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:13 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:13 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 13:00:00 (before)
                2025-02-09 14:00:00 (after)
17:12:16 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:16 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:16 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 49x51x7) for time after (2025-02-09 14:00:00)
17:12:16 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 13:00:00) in space  (linearNDFast)
17:12:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:16 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 14:00:00) in space  (linearNDFast)
17:12:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:16 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 13:00:00, weight 0.81) and
                      after (2025-02-09 14:00:00, weight 0.19) in time
17:12:16 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.60467496158966 and -59.24461064152076 degrees.
17:12:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.60467496158966 and -59.24461064152076 degrees.
17:12:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:17 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:17 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:17 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:17 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.840467 (min) 0.110589 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.212338 (min) 0.511903 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.196216 (min) -0.0832719 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.73023 (min) -5.93071 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.97413 (min) -4.7684 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.5199 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.74032 (min) 6.90271 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4011 (min) 34.7895 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000271443 (min) 0.00119062 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:17 DEBUG   opendrift:694: No elements hit coastline.
17:12:17 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:17 DEBUG   opendrift:1695: No elements to deactivate
17:12:17 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:17 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:17 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:17 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:17 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
17:12:17 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
17:12:17 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 319.   0.]
 [  0.   0.   0.   0.   0.]
 [ 71.   0.   0. 383.   0.]
 [  0.   0. 649.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:17 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:17 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:17 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.05852625969599126
17:12:17 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:17 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:17 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:17 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 53 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 53 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 54 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 54 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:17 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:17 DEBUG   opendrift.models.oceandrift:535: 55 elements reached seafloor, interacting with bottom
17:12:17 DEBUG   opendrift:738: Lifting 55 elements to seafloor.
17:12:17 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
17:12:17 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
17:12:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:17 INFO    opendrift.models.chemicaldrift:1861: partitioning: [201, 0, 258, 41, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:17 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:17 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:17 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:17 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:12:17 DEBUG   opendrift:2055: ======================================================================
17:12:17 INFO    opendrift:2056: 2025-02-09 13:41:25.118634 - step 42 of 96 - 500 active elements (0 deactivated)
17:12:17 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:17 DEBUG   opendrift:2064: ======================================================================
17:12:17 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.81293079586219
17:12:17 DEBUG   opendrift:2080:                10.382692913343014 <- longitude -> 10.755400383411683
17:12:17 DEBUG   opendrift:2085:                -38.24190673044858   <- z ->   0.0
17:12:17 DEBUG   opendrift:2086: ---------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:17 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:17 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 13:00:00 (before)
                2025-02-09 14:00:00 (after)
17:12:17 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 13:00:00) in space  (linearNDFast)
17:12:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:17 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 14:00:00) in space  (linearNDFast)
17:12:17 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:17 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 13:00:00, weight 0.31) and
                      after (2025-02-09 14:00:00, weight 0.69) in time
17:12:17 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.61731814731113 and -59.24461064152076 degrees.
17:12:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.61731814731113 and -59.24461064152076 degrees.
17:12:17 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:17 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:17 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:17 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:17 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:17 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:17 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:17 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:17 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:17 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:17 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:17 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:17 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.880635 (min) 0.170457 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.244433 (min) 0.555573 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.228049 (min) -0.103272 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.80832 (min) -5.9722 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.9589 (min) -4.96327 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 93.6187 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.72108 (min) 6.91309 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3479 (min) 34.7965 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000519765 (min) 0.00103468 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:17 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:17 DEBUG   opendrift:694: No elements hit coastline.
17:12:17 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:12:18 DEBUG   opendrift:1695: No elements to deactivate
17:12:18 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
17:12:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
17:12:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 321.   0.]
 [  0.   0.   0.   0.   0.]
 [ 72.   0.   0. 385.   0.]
 [  0.   0. 663.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:18 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:18 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.058333500237750996
17:12:18 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:18 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:18 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:18 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 46 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 46 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 47 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 47 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 48 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 48 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:12:18 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:18 DEBUG   opendrift.models.oceandrift:535: 49 elements reached seafloor, interacting with bottom
17:12:18 DEBUG   opendrift:738: Lifting 49 elements to seafloor.
17:12:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
17:12:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
17:12:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [200, 0, 267, 33, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:18 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:18 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:18 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:18 DEBUG   opendrift:738: Lifting 35 elements to seafloor.
17:12:18 DEBUG   opendrift:2055: ======================================================================
17:12:18 INFO    opendrift:2056: 2025-02-09 14:11:25.118634 - step 43 of 96 - 500 active elements (0 deactivated)
17:12:18 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:18 DEBUG   opendrift:2064: ======================================================================
17:12:18 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.81801864066336
17:12:18 DEBUG   opendrift:2080:                10.35606855542605 <- longitude -> 10.755400383411683
17:12:18 DEBUG   opendrift:2085:                -36.87020555002922   <- z ->   0.0
17:12:18 DEBUG   opendrift:2086: ---------------------------------
17:12:18 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:18 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:18 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:18 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:18 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:18 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:18 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:18 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 14:00:00 (before)
                2025-02-09 15:00:00 (after)
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:21 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:21 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 49x52x7) for time after (2025-02-09 15:00:00)
17:12:21 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 14:00:00) in space  (linearNDFast)
17:12:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:21 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 15:00:00) in space  (linearNDFast)
17:12:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:21 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 14:00:00, weight 0.81) and
                      after (2025-02-09 15:00:00, weight 0.19) in time
17:12:21 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.643942499968965 and -59.24461064152076 degrees.
17:12:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.643942499968965 and -59.24461064152076 degrees.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:21 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.870867 (min) 0.197622 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.258608 (min) 0.728428 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.264243 (min) -0.13182 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -6.99259 (min) -6.11071 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.10233 (min) -5.20623 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 95.193 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.7286 (min) 6.93192 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3521 (min) 34.8055 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000821264 (min) 0.00113525 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:21 DEBUG   opendrift:694: No elements hit coastline.
17:12:21 DEBUG   opendrift:738: Lifting 34 elements to seafloor.
17:12:21 DEBUG   opendrift:1695: No elements to deactivate
17:12:21 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 2]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 324.   0.]
 [  0.   0.   0.   0.   0.]
 [ 74.   0.   0. 391.   0.]
 [  0.   0. 679.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:21 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:21 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.059618480915340485
17:12:21 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:21 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:21 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 36 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 36 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 37 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 37 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 39 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 39 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 40 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 40 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 41 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 41 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 41 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 41 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 42 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 42 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 43 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 43 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 43 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 44 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 44 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 45 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 45 elements to seafloor.
17:12:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 22
17:12:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 22 elements
17:12:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [199, 0, 278, 23, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:21 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:21 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:21 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift:2055: ======================================================================
17:12:21 INFO    opendrift:2056: 2025-02-09 14:41:25.118634 - step 44 of 96 - 500 active elements (0 deactivated)
17:12:21 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:21 DEBUG   opendrift:2064: ======================================================================
17:12:21 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.818065741886805
17:12:21 DEBUG   opendrift:2080:                10.342087595341718 <- longitude -> 10.755400383411683
17:12:21 DEBUG   opendrift:2085:                -37.577448625723555   <- z ->   0.0
17:12:21 DEBUG   opendrift:2086: ---------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 14:00:00 (before)
                2025-02-09 15:00:00 (after)
17:12:21 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 14:00:00) in space  (linearNDFast)
17:12:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:21 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 15:00:00) in space  (linearNDFast)
17:12:21 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:21 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 14:00:00, weight 0.31) and
                      after (2025-02-09 15:00:00, weight 0.69) in time
17:12:21 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.65792345407237 and -59.244610623912216 degrees.
17:12:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.65792345407237 and -59.244610623912216 degrees.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:21 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:21 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:21 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:21 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.915326 (min) 0.261444 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.270252 (min) 0.71262 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.309309 (min) -0.17428 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.26054 (min) -6.22588 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.31422 (min) -5.5463 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 94.9875 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71261 (min) 6.95856 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3471 (min) 34.821 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000639591 (min) 0.00127471 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:21 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:21 DEBUG   opendrift:694: No elements hit coastline.
17:12:21 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:21 DEBUG   opendrift:1695: No elements to deactivate
17:12:21 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 326.   0.]
 [  0.   0.   0.   0.   0.]
 [ 76.   0.   0. 400.   0.]
 [  0.   0. 701.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:21 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:21 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.06387627641174161
17:12:21 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:21 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:21 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 25 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 25 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 26 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 26 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 28 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 28 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 29 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 29 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 29 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 29 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 30 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 30 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 31 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 31 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 32 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 32 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 32 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 32 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 32 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 32 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 33 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 33 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 33 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 33 elements to seafloor.
17:12:21 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:21 DEBUG   opendrift.models.oceandrift:535: 33 elements reached seafloor, interacting with bottom
17:12:21 DEBUG   opendrift:738: Lifting 33 elements to seafloor.
17:12:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
17:12:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
17:12:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [199, 0, 289, 12, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:21 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:21 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:21 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:21 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:21 DEBUG   opendrift:2055: ======================================================================
17:12:21 INFO    opendrift:2056: 2025-02-09 15:11:25.118634 - step 45 of 96 - 500 active elements (0 deactivated)
17:12:21 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:21 DEBUG   opendrift:2064: ======================================================================
17:12:21 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.81689472025336
17:12:21 DEBUG   opendrift:2080:                10.324245954332302 <- longitude -> 10.751577050451635
17:12:21 DEBUG   opendrift:2085:                -38.48223681999683   <- z ->   0.0
17:12:21 DEBUG   opendrift:2086: ---------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:21 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:21 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:21 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 15:00:00 (before)
                2025-02-09 16:00:00 (after)
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:23 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:23 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x53x7) for time after (2025-02-09 16:00:00)
17:12:23 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 15:00:00) in space  (linearNDFast)
17:12:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:23 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 16:00:00) in space  (linearNDFast)
17:12:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
17:12:23 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 15:00:00, weight 0.81) and
                      after (2025-02-09 16:00:00, weight 0.19) in time
17:12:23 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.675765107372854 and -59.24843397218348 degrees.
17:12:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.675765107372854 and -59.24843397218348 degrees.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:23 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.931465 (min) 0.265088 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.288426 (min) 0.784602 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.354641 (min) -0.219156 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.4884 (min) -6.35931 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.42913 (min) -5.71335 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 94.341 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.71874 (min) 6.9767 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3929 (min) 34.8357 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000975776 (min) 0.00134188 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:23 DEBUG   opendrift:694: No elements hit coastline.
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift:1695: No elements to deactivate
17:12:23 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 327.   0.]
 [  0.   0.   0.   0.   0.]
 [ 76.   0.   0. 408.   0.]
 [  0.   0. 722.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:23 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:23 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.06795363727762306
17:12:23 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:23 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:23 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 22 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 22 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:12:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
17:12:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
17:12:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [198, 0, 296, 6, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:23 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:23 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:23 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift:2055: ======================================================================
17:12:23 INFO    opendrift:2056: 2025-02-09 15:41:25.118634 - step 46 of 96 - 500 active elements (0 deactivated)
17:12:23 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:23 DEBUG   opendrift:2064: ======================================================================
17:12:23 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.815054678023785
17:12:23 DEBUG   opendrift:2080:                10.311107929207221 <- longitude -> 10.746951875969232
17:12:23 DEBUG   opendrift:2085:                -37.65998322649495   <- z ->   0.0
17:12:23 DEBUG   opendrift:2086: ---------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 15:00:00 (before)
                2025-02-09 16:00:00 (after)
17:12:23 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 15:00:00) in space  (linearNDFast)
17:12:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:23 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 16:00:00) in space  (linearNDFast)
17:12:23 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:23 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 15:00:00, weight 0.31) and
                      after (2025-02-09 16:00:00, weight 0.69) in time
17:12:23 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.68890313469461 and -59.25305913810452 degrees.
17:12:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.68890313469461 and -59.25305913810452 degrees.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:23 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:23 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:23 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:23 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.928686 (min) 0.282281 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.30311 (min) 0.765841 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.403336 (min) -0.267964 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.68192 (min) -6.56788 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.31066 (min) -5.53904 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 93.676 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.70156 (min) 6.99198 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3026 (min) 34.8414 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000925604 (min) 0.00144275 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:23 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:23 DEBUG   opendrift:694: No elements hit coastline.
17:12:23 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:23 DEBUG   opendrift:1695: No elements to deactivate
17:12:23 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
17:12:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 0 2 2]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 3 0 0]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 84.   0.   0. 418.   0.]
 [  0.   0. 739.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:23 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:23 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07008059680456363
17:12:23 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:23 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:23 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:23 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:23 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:12:23 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:12:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
17:12:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
17:12:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [205, 0, 290, 5, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:23 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:23 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:23 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:23 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:23 DEBUG   opendrift:2055: ======================================================================
17:12:23 INFO    opendrift:2056: 2025-02-09 16:11:25.118634 - step 47 of 96 - 500 active elements (0 deactivated)
17:12:23 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:23 DEBUG   opendrift:2064: ======================================================================
17:12:23 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.81377570830843
17:12:23 DEBUG   opendrift:2080:                10.29376953023742 <- longitude -> 10.741467811482286
17:12:23 DEBUG   opendrift:2085:                -38.61576147792846   <- z ->   0.0
17:12:23 DEBUG   opendrift:2086: ---------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:23 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:23 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:23 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 16:00:00 (before)
                2025-02-09 17:00:00 (after)
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:25 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:25 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x53x7) for time after (2025-02-09 17:00:00)
17:12:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 16:00:00) in space  (linearNDFast)
17:12:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 17:00:00) in space  (linearNDFast)
17:12:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 16:00:00, weight 0.81) and
                      after (2025-02-09 17:00:00, weight 0.19) in time
17:12:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.706241538224454 and -59.258543203140135 degrees.
17:12:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.706241538224454 and -59.258543203140135 degrees.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:25 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.943331 (min) 0.400536 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.290768 (min) 0.795624 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.452988 (min) -0.317812 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -7.98065 (min) -6.71458 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.14595 (min) -5.30122 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 92.9835 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.69318 (min) 7.00579 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3604 (min) 34.8497 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00128769 (min) 0.00171287 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:25 DEBUG   opendrift:694: No elements hit coastline.
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift:1695: No elements to deactivate
17:12:25 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 87.   0.   0. 425.   0.]
 [  0.   0. 748.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:25 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:25 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07211774854933392
17:12:25 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:25 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:25 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [208, 0, 287, 5, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:25 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:25 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:25 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:25 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:25 DEBUG   opendrift:2055: ======================================================================
17:12:25 INFO    opendrift:2056: 2025-02-09 16:41:25.118634 - step 48 of 96 - 500 active elements (0 deactivated)
17:12:25 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:25 DEBUG   opendrift:2064: ======================================================================
17:12:25 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.81605215059907
17:12:25 DEBUG   opendrift:2080:                10.277817357439291 <- longitude -> 10.73493933123829
17:12:25 DEBUG   opendrift:2085:                -37.10802858985322   <- z ->   0.0
17:12:25 DEBUG   opendrift:2086: ---------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 16:00:00 (before)
                2025-02-09 17:00:00 (after)
17:12:25 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 16:00:00) in space  (linearNDFast)
17:12:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 17:00:00) in space  (linearNDFast)
17:12:25 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:25 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 16:00:00, weight 0.31) and
                      after (2025-02-09 17:00:00, weight 0.69) in time
17:12:25 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.72219371018347 and -59.26507167213748 degrees.
17:12:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.72219371018347 and -59.26507167213748 degrees.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:25 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:25 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:25 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:25 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.959554 (min) 0.432507 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.300487 (min) 0.793248 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.50374 (min) -0.369352 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -8.4472 (min) -6.9354 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.91916 (min) -5.00971 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 92.2221 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.69123 (min) 7.00954 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3478 (min) 34.8534 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00134788 (min) 0.00178863 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:25 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:25 DEBUG   opendrift:694: No elements hit coastline.
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift:1695: No elements to deactivate
17:12:25 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 90.   0.   0. 428.   0.]
 [  0.   0. 751.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:25 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:25 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07495900439358806
17:12:25 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:25 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:25 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:25 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:25 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [211, 0, 286, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:25 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:25 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:25 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:25 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:25 DEBUG   opendrift:2055: ======================================================================
17:12:25 INFO    opendrift:2056: 2025-02-09 17:11:25.118634 - step 49 of 96 - 500 active elements (0 deactivated)
17:12:25 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:25 DEBUG   opendrift:2064: ======================================================================
17:12:25 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.81776494187656
17:12:25 DEBUG   opendrift:2080:                10.258283590343368 <- longitude -> 10.72574812563467
17:12:25 DEBUG   opendrift:2085:                -37.292131820207864   <- z ->   0.0
17:12:25 DEBUG   opendrift:2086: ---------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:25 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:25 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:25 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 17:00:00 (before)
                2025-02-09 18:00:00 (after)
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:27 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:27 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 48x54x7) for time after (2025-02-09 18:00:00)
17:12:27 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 17:00:00) in space  (linearNDFast)
17:12:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:27 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 18:00:00) in space  (linearNDFast)
17:12:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:27 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 17:00:00, weight 0.81) and
                      after (2025-02-09 18:00:00, weight 0.19) in time
17:12:27 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.741727488920674 and -59.274262888403776 degrees.
17:12:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.741727488920674 and -59.274262888403776 degrees.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:27 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:27 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.98609 (min) 0.458024 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.312777 (min) 0.773233 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.554737 (min) -0.421854 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -8.86249 (min) -7.14124 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.72663 (min) -4.71234 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.5313 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.69462 (min) 7.01346 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3365 (min) 34.8537 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00150844 (min) 0.00211798 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:27 DEBUG   opendrift:694: No elements hit coastline.
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift:1695: No elements to deactivate
17:12:27 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
17:12:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
17:12:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 93.   0.   0. 434.   0.]
 [  0.   0. 759.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:27 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:27 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07775817718243415
17:12:27 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:27 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:27 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [214, 0, 284, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:27 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:27 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:27 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:27 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:27 DEBUG   opendrift:2055: ======================================================================
17:12:27 INFO    opendrift:2056: 2025-02-09 17:41:25.118634 - step 50 of 96 - 500 active elements (0 deactivated)
17:12:27 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:27 DEBUG   opendrift:2064: ======================================================================
17:12:27 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.817376254694885
17:12:27 DEBUG   opendrift:2080:                10.228493608789902 <- longitude -> 10.71794125799312
17:12:27 DEBUG   opendrift:2085:                -38.306043422719014   <- z ->   0.0
17:12:27 DEBUG   opendrift:2086: ---------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 17:00:00 (before)
                2025-02-09 18:00:00 (after)
17:12:27 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 17:00:00) in space  (linearNDFast)
17:12:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:27 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 18:00:00) in space  (linearNDFast)
17:12:27 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:27 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 17:00:00, weight 0.31) and
                      after (2025-02-09 18:00:00, weight 0.69) in time
17:12:27 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.771517466873945 and -59.28206976862809 degrees.
17:12:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.771517466873945 and -59.28206976862809 degrees.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:27 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:27 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:27 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:27 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:27 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:27 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:27 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.997318 (min) 0.440583 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.352766 (min) 0.752794 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.606857 (min) -0.475918 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.21064 (min) -7.33891 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.57746 (min) -4.4625 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.5985 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.67295 (min) 7.01094 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3429 (min) 34.8528 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00181836 (min) 0.00221785 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:27 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:27 DEBUG   opendrift:694: No elements hit coastline.
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift:1695: No elements to deactivate
17:12:27 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 0
17:12:27 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:27 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08097356974764569
17:12:27 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:27 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:27 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:27 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:27 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
17:12:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
17:12:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [214, 0, 284, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:27 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:27 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:27 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:27 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:27 DEBUG   opendrift:2055: ======================================================================
17:12:27 INFO    opendrift:2056: 2025-02-09 18:11:25.118634 - step 51 of 96 - 500 active elements (0 deactivated)
17:12:27 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:27 DEBUG   opendrift:2064: ======================================================================
17:12:27 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.81594294991744
17:12:27 DEBUG   opendrift:2080:                10.198364524395892 <- longitude -> 10.716125600917145
17:12:27 DEBUG   opendrift:2085:                -37.841492944485424   <- z ->   0.0
17:12:27 DEBUG   opendrift:2086: ---------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:27 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:27 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:27 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:27 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 18:00:00 (before)
                2025-02-09 19:00:00 (after)
17:12:29 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:29 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:29 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:29 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:29 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:29 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:29 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 49x56x7) for time after (2025-02-09 19:00:00)
17:12:29 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 18:00:00) in space  (linearNDFast)
17:12:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:29 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 19:00:00) in space  (linearNDFast)
17:12:29 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
17:12:29 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 18:00:00, weight 0.81) and
                      after (2025-02-09 19:00:00, weight 0.19) in time
17:12:29 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.80164654746557 and -59.283885421551105 degrees.
17:12:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.80164654746557 and -59.283885421551105 degrees.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:30 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:30 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.00482 (min) 0.471841 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.36837 (min) 0.769804 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.655504 (min) -0.528817 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.584 (min) -7.45692 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.49466 (min) -4.25703 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.6351 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.68658 (min) 7.01396 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3733 (min) 34.8528 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00176927 (min) 0.0023631 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:30 DEBUG   opendrift:694: No elements hit coastline.
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift:1695: No elements to deactivate
17:12:30 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:30 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:30 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:30 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:30 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 95.   0.   0. 438.   0.]
 [  0.   0. 764.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:30 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:30 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:30 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08459581931548593
17:12:30 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:30 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:30 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
17:12:30 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
17:12:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:30 INFO    opendrift.models.chemicaldrift:1861: partitioning: [216, 0, 282, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:30 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:30 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:30 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:30 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:30 DEBUG   opendrift:2055: ======================================================================
17:12:30 INFO    opendrift:2056: 2025-02-09 18:41:25.118634 - step 52 of 96 - 500 active elements (0 deactivated)
17:12:30 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:30 DEBUG   opendrift:2064: ======================================================================
17:12:30 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.81541023638147
17:12:30 DEBUG   opendrift:2080:                10.17342118082795 <- longitude -> 10.715755735825084
17:12:30 DEBUG   opendrift:2085:                -39.881324768066406   <- z ->   0.0
17:12:30 DEBUG   opendrift:2086: ---------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 18:00:00 (before)
                2025-02-09 19:00:00 (after)
17:12:30 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 18:00:00) in space  (linearNDFast)
17:12:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:30 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 19:00:00) in space  (linearNDFast)
17:12:30 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:30 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 18:00:00, weight 0.31) and
                      after (2025-02-09 19:00:00, weight 0.69) in time
17:12:30 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.82658991376735 and -59.284255280283524 degrees.
17:12:30 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.82658991376735 and -59.284255280283524 degrees.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:30 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:30 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:30 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:30 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:30 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:30 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.00949 (min) 0.412856 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.387705 (min) 0.68451 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.700334 (min) -0.579817 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.73606 (min) -7.51858 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.59859 (min) -4.11944 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.0975 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.65807 (min) 7.03575 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3163 (min) 34.8626 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.001585 (min) 0.00219665 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:30 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:30 DEBUG   opendrift:694: No elements hit coastline.
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift:1695: No elements to deactivate
17:12:30 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:30 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:30 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:30 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:30 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 97.   0.   0. 440.   0.]
 [  0.   0. 766.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:30 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:30 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:30 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08540521204055714
17:12:30 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:30 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:30 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:30 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:30 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:30 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
17:12:30 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:30 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
17:12:30 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:30 INFO    opendrift.models.chemicaldrift:1861: partitioning: [218, 0, 280, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:30 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:30 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:30 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:30 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:30 DEBUG   opendrift:2055: ======================================================================
17:12:30 INFO    opendrift:2056: 2025-02-09 19:11:25.118634 - step 53 of 96 - 500 active elements (0 deactivated)
17:12:30 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:30 DEBUG   opendrift:2064: ======================================================================
17:12:30 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.81402487555975
17:12:30 DEBUG   opendrift:2080:                10.15196831543001 <- longitude -> 10.713052094742652
17:12:30 DEBUG   opendrift:2085:                -41.00854840772493   <- z ->   0.0
17:12:30 DEBUG   opendrift:2086: ---------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:30 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:30 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:30 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:30 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 19:00:00 (before)
                2025-02-09 20:00:00 (after)
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:32 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:32 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 49x57x7) for time after (2025-02-09 20:00:00)
17:12:32 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 19:00:00) in space  (linearNDFast)
17:12:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:32 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 20:00:00) in space  (linearNDFast)
17:12:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:32 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 19:00:00, weight 0.81) and
                      after (2025-02-09 20:00:00, weight 0.19) in time
17:12:32 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.848042776397094 and -59.28695893651388 degrees.
17:12:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.848042776397094 and -59.28695893651388 degrees.
17:12:32 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:32 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:32 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:32 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:32 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:32 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:32 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:32 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:32 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:32 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:32 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:32 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:32 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:32 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:32 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.01471 (min) 0.41799 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.380767 (min) 0.649181 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.734059 (min) -0.622362 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.72944 (min) -7.46525 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.66319 (min) -4.04602 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 88.9717 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.66539 (min) 7.04156 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3727 (min) 34.8659 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00168477 (min) 0.00239279 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:32 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:32 DEBUG   opendrift:694: No elements hit coastline.
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift:1695: No elements to deactivate
17:12:32 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
17:12:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
17:12:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [102.   0.   0. 442.   0.]
 [  0.   0. 768.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:32 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:32 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08408072554165757
17:12:32 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:32 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:32 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:32 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:32 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:32 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
17:12:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
17:12:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [223, 0, 275, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:32 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:32 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:32 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:32 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:32 DEBUG   opendrift:2055: ======================================================================
17:12:32 INFO    opendrift:2056: 2025-02-09 19:41:25.118634 - step 54 of 96 - 500 active elements (0 deactivated)
17:12:32 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:32 DEBUG   opendrift:2064: ======================================================================
17:12:32 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.818536313813475
17:12:32 DEBUG   opendrift:2080:                10.124383219652614 <- longitude -> 10.711588790226454
17:12:32 DEBUG   opendrift:2085:                -40.31568323020268   <- z ->   0.0
17:12:32 DEBUG   opendrift:2086: ---------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:32 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:32 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:32 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 19:00:00 (before)
                2025-02-09 20:00:00 (after)
17:12:32 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 19:00:00) in space  (linearNDFast)
17:12:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:32 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 20:00:00) in space  (linearNDFast)
17:12:32 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:33 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 19:00:00, weight 0.31) and
                      after (2025-02-09 20:00:00, weight 0.69) in time
17:12:33 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.8756278647464 and -59.28842222355598 degrees.
17:12:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.8756278647464 and -59.28842222355598 degrees.
17:12:33 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:33 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:33 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:33 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:33 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:33 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:33 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:33 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:33 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:33 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:33 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:33 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:33 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:33 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:33 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:33 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:33 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:33 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.0154 (min) 0.388399 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.40146 (min) 0.617481 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.747284 (min) -0.642444 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.54651 (min) -7.57251 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.54119 (min) -4.08862 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.4169 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.65189 (min) 7.04658 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3608 (min) 34.8655 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00156019 (min) 0.00221166 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:33 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:33 DEBUG   opendrift:694: No elements hit coastline.
17:12:33 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:33 DEBUG   opendrift:1695: No elements to deactivate
17:12:33 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
17:12:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
17:12:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [106.   0.   0. 443.   0.]
 [  0.   0. 769.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:33 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:33 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07995104329312953
17:12:33 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:33 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:33 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:33 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:33 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:33 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:33 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [227, 0, 271, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:33 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:33 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:33 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:33 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:33 DEBUG   opendrift:2055: ======================================================================
17:12:33 INFO    opendrift:2056: 2025-02-09 20:11:25.118634 - step 55 of 96 - 500 active elements (0 deactivated)
17:12:33 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:33 DEBUG   opendrift:2064: ======================================================================
17:12:33 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.81676913157652
17:12:33 DEBUG   opendrift:2080:                10.095157547332136 <- longitude -> 10.709439973695293
17:12:33 DEBUG   opendrift:2085:                -39.008953058794596   <- z ->   0.0
17:12:33 DEBUG   opendrift:2086: ---------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:33 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:33 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:33 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:33 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 20:00:00 (before)
                2025-02-09 21:00:00 (after)
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:34 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:34 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 50x62x7) for time after (2025-02-09 21:00:00)
17:12:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 20:00:00) in space  (linearNDFast)
17:12:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 21:00:00) in space  (linearNDFast)
17:12:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 20:00:00, weight 0.81) and
                      after (2025-02-09 21:00:00, weight 0.19) in time
17:12:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.9048535352552 and -59.290571046470035 degrees.
17:12:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.9048535352552 and -59.290571046470035 degrees.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.03125 (min) 0.275185 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.402891 (min) 0.535006 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.745377 (min) -0.640484 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.50105 (min) -7.56057 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.37752 (min) -4.02778 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 88.7762 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.63478 (min) 7.04904 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4017 (min) 34.8648 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00121379 (min) 0.00221867 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:34 DEBUG   opendrift:694: No elements hit coastline.
17:12:34 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:34 DEBUG   opendrift:1695: No elements to deactivate
17:12:34 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 329.   0.]
 [  0.   0.   0.   0.   0.]
 [106.   0.   0. 447.   0.]
 [  0.   0. 773.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:34 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:34 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07836028967687471
17:12:34 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:34 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:34 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [226, 0, 272, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:34 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:34 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:34 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:34 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:34 DEBUG   opendrift:2055: ======================================================================
17:12:34 INFO    opendrift:2056: 2025-02-09 20:41:25.118634 - step 56 of 96 - 500 active elements (0 deactivated)
17:12:34 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:34 DEBUG   opendrift:2064: ======================================================================
17:12:34 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.816045862916305
17:12:34 DEBUG   opendrift:2080:                10.07853705499635 <- longitude -> 10.702986207419272
17:12:34 DEBUG   opendrift:2085:                -38.70108537813087   <- z ->   0.0
17:12:34 DEBUG   opendrift:2086: ---------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 20:00:00 (before)
                2025-02-09 21:00:00 (after)
17:12:34 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 20:00:00) in space  (linearNDFast)
17:12:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:34 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 21:00:00) in space  (linearNDFast)
17:12:34 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:34 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 20:00:00, weight 0.31) and
                      after (2025-02-09 21:00:00, weight 0.69) in time
17:12:34 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.92147403526019 and -59.29702481275786 degrees.
17:12:34 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.92147403526019 and -59.29702481275786 degrees.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:34 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:34 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:34 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:34 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:34 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.01063 (min) 0.275443 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.316457 (min) 0.46324 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.719216 (min) -0.616024 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.50932 (min) -7.52188 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.07847 (min) -3.81263 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.2807 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.62663 (min) 7.05629 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3735 (min) 34.8686 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00100027 (min) 0.00200622 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:34 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:34 DEBUG   opendrift:694: No elements hit coastline.
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift:1695: No elements to deactivate
17:12:34 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:34 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:34 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:34 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:34 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 329.   0.]
 [  0.   0.   0.   0.   0.]
 [109.   0.   0. 450.   0.]
 [  0.   0. 777.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:34 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:34 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:34 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07821271654633306
17:12:34 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:34 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:34 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:34 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:34 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
17:12:34 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:34 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:34 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:34 INFO    opendrift.models.chemicaldrift:1861: partitioning: [229, 0, 269, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:34 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:34 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:34 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:34 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:34 DEBUG   opendrift:2055: ======================================================================
17:12:34 INFO    opendrift:2056: 2025-02-09 21:11:25.118634 - step 57 of 96 - 500 active elements (0 deactivated)
17:12:34 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:34 DEBUG   opendrift:2064: ======================================================================
17:12:34 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.820154075871976
17:12:34 DEBUG   opendrift:2080:                10.053451537950673 <- longitude -> 10.699389231229238
17:12:34 DEBUG   opendrift:2085:                -37.03641012546546   <- z ->   0.0
17:12:34 DEBUG   opendrift:2086: ---------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:34 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:34 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:34 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:34 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 21:00:00 (before)
                2025-02-09 22:00:00 (after)
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:36 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:36 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 52x64x7) for time after (2025-02-09 22:00:00)
17:12:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 21:00:00) in space  (linearNDFast)
17:12:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 22:00:00) in space  (linearNDFast)
17:12:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 21:00:00, weight 0.81) and
                      after (2025-02-09 22:00:00, weight 0.19) in time
17:12:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.946559555868184 and -59.300621774496186 degrees.
17:12:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.946559555868184 and -59.300621774496186 degrees.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.01379 (min) 0.233501 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.348589 (min) 0.384551 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.680255 (min) -0.578069 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.43963 (min) -7.42549 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.11 (min) -3.79011 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.1516 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.61524 (min) 7.06138 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4364 (min) 34.8712 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000732014 (min) 0.00202882 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:36 DEBUG   opendrift:694: No elements hit coastline.
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift:1695: No elements to deactivate
17:12:36 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 329.   0.]
 [  0.   0.   0.   0.   0.]
 [111.   0.   0. 450.   0.]
 [  0.   0. 777.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:36 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:36 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07729780550246693
17:12:36 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:36 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:36 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
17:12:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
17:12:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [231, 0, 267, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:36 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:36 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:36 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift:2055: ======================================================================
17:12:36 INFO    opendrift:2056: 2025-02-09 21:41:25.118634 - step 58 of 96 - 500 active elements (0 deactivated)
17:12:36 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:36 DEBUG   opendrift:2064: ======================================================================
17:12:36 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.824267230253945
17:12:36 DEBUG   opendrift:2080:                10.03609961101631 <- longitude -> 10.703563060512199
17:12:36 DEBUG   opendrift:2085:                -39.49750705237206   <- z ->   0.0
17:12:36 DEBUG   opendrift:2086: ---------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 21:00:00 (before)
                2025-02-09 22:00:00 (after)
17:12:36 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 21:00:00) in space  (linearNDFast)
17:12:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:36 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 22:00:00) in space  (linearNDFast)
17:12:36 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:36 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 21:00:00, weight 0.31) and
                      after (2025-02-09 22:00:00, weight 0.69) in time
17:12:36 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.963911483844875 and -59.29644795237863 degrees.
17:12:36 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.963911483844875 and -59.29644795237863 degrees.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:36 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:36 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:36 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:36 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:36 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.994807 (min) 0.174789 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.353677 (min) 0.329598 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.618421 (min) -0.515976 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.32731 (min) -7.25685 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.62515 (min) -4.04224 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.2608 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.60524 (min) 7.11156 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4094 (min) 34.874 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000219867 (min) 0.00171607 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:36 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:36 DEBUG   opendrift:694: No elements hit coastline.
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift:1695: No elements to deactivate
17:12:36 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:36 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:36 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:36 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:36 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 330.   0.]
 [  0.   0.   0.   0.   0.]
 [114.   0.   0. 452.   0.]
 [  0.   0. 779.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:36 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:36 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:36 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07640998719074854
17:12:36 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:36 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:36 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:36 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:36 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
17:12:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
17:12:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [233, 0, 265, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:36 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:36 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:36 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:36 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:36 DEBUG   opendrift:2055: ======================================================================
17:12:36 INFO    opendrift:2056: 2025-02-09 22:11:25.118634 - step 59 of 96 - 500 active elements (0 deactivated)
17:12:36 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:36 DEBUG   opendrift:2064: ======================================================================
17:12:36 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.822500181879406
17:12:36 DEBUG   opendrift:2080:                10.012537076942817 <- longitude -> 10.702467557328275
17:12:36 DEBUG   opendrift:2085:                -39.97867064780753   <- z ->   0.0
17:12:36 DEBUG   opendrift:2086: ---------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:36 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:36 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:36 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:36 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 22:00:00 (before)
                2025-02-09 23:00:00 (after)
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:38 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:38 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 54x67x7) for time after (2025-02-09 23:00:00)
17:12:38 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 22:00:00) in space  (linearNDFast)
17:12:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:38 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 23:00:00) in space  (linearNDFast)
17:12:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:38 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 22:00:00, weight 0.81) and
                      after (2025-02-09 23:00:00, weight 0.19) in time
17:12:38 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.98747401110722 and -59.297543445076755 degrees.
17:12:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.98747401110722 and -59.297543445076755 degrees.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.977107 (min) 0.139837 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.367311 (min) 0.282949 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.553388 (min) -0.452985 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.24587 (min) -7.05572 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.79742 (min) -4.16579 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 89.0768 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.59524 (min) 7.10638 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3814 (min) 34.8734 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000160915 (min) 0.00172842 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:38 DEBUG   opendrift:694: No elements hit coastline.
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift:1695: No elements to deactivate
17:12:38 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 330.   0.]
 [  0.   0.   0.   0.   0.]
 [116.   0.   0. 452.   0.]
 [  0.   0. 780.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:38 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:38 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07598375503643534
17:12:38 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:38 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:38 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
17:12:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
17:12:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [235, 0, 263, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:38 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:38 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:38 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift:2055: ======================================================================
17:12:38 INFO    opendrift:2056: 2025-02-09 22:41:25.118634 - step 60 of 96 - 500 active elements (0 deactivated)
17:12:38 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:38 DEBUG   opendrift:2064: ======================================================================
17:12:38 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.820755938648205
17:12:38 DEBUG   opendrift:2080:                9.990937100396664 <- longitude -> 10.700496964770423
17:12:38 DEBUG   opendrift:2085:                -40.229483347432684   <- z ->   0.0
17:12:38 DEBUG   opendrift:2086: ---------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 22:00:00 (before)
                2025-02-09 23:00:00 (after)
17:12:38 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 22:00:00) in space  (linearNDFast)
17:12:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:38 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-09 23:00:00) in space  (linearNDFast)
17:12:38 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:38 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 22:00:00, weight 0.31) and
                      after (2025-02-09 23:00:00, weight 0.69) in time
17:12:38 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.00907400872608 and -59.29951404821375 degrees.
17:12:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.00907400872608 and -59.29951404821375 degrees.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:38 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:38 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:38 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:38 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.96665 (min) 0.0988338 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.364176 (min) 0.350341 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.483024 (min) -0.383308 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.13323 (min) -7.01893 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.47343 (min) -4.07085 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 91.0805 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.58524 (min) 7.0882 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4561 (min) 34.8757 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000111393 (min) 0.00168566 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:38 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:38 DEBUG   opendrift:694: No elements hit coastline.
17:12:38 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:38 DEBUG   opendrift:1695: No elements to deactivate
17:12:38 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 331.   0.]
 [  0.   0.   0.   0.   0.]
 [118.   0.   0. 453.   0.]
 [  0.   0. 781.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:38 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:38 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07480428561672546
17:12:38 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:38 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:38 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:38 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:38 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:38 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 261, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:38 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:38 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:38 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:38 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:38 DEBUG   opendrift:2055: ======================================================================
17:12:38 INFO    opendrift:2056: 2025-02-09 23:11:25.118634 - step 61 of 96 - 500 active elements (0 deactivated)
17:12:38 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:38 DEBUG   opendrift:2064: ======================================================================
17:12:38 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82641672639129
17:12:38 DEBUG   opendrift:2080:                9.976011670581588 <- longitude -> 10.698177345703105
17:12:38 DEBUG   opendrift:2085:                -41.01001769193522   <- z ->   0.0
17:12:38 DEBUG   opendrift:2086: ---------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:38 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:38 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:38 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 23:00:00 (before)
                2025-02-10 00:00:00 (after)
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:41 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:41 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 56x71x7) for time after (2025-02-10 00:00:00)
17:12:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 23:00:00) in space  (linearNDFast)
17:12:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 00:00:00) in space  (linearNDFast)
17:12:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 23:00:00, weight 0.81) and
                      after (2025-02-10 00:00:00, weight 0.19) in time
17:12:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.02399943826903 and -59.30183367465385 degrees.
17:12:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.02399943826903 and -59.30183367465385 degrees.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.970491 (min) 0.0505276 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.358083 (min) 0.283499 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.422804 (min) -0.318992 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.0753 (min) -6.88354 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.44236 (min) -4.13654 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.6556 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.57524 (min) 7.09803 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5279 (min) 34.8773 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000161492 (min) 0.00168626 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:41 DEBUG   opendrift:694: No elements hit coastline.
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift:1695: No elements to deactivate
17:12:41 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 0]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 3]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 333.   0.]
 [  0.   0.   0.   0.   0.]
 [121.   0.   0. 456.   0.]
 [  0.   0. 784.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:41 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:41 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07486485414848555
17:12:41 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:41 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:41 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [237, 0, 260, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:41 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:41 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:41 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:41 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:41 DEBUG   opendrift:2055: ======================================================================
17:12:41 INFO    opendrift:2056: 2025-02-09 23:41:25.118634 - step 62 of 96 - 500 active elements (0 deactivated)
17:12:41 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:41 DEBUG   opendrift:2064: ======================================================================
17:12:41 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.82764862088245
17:12:41 DEBUG   opendrift:2080:                9.962637317438421 <- longitude -> 10.695772943828363
17:12:41 DEBUG   opendrift:2085:                -41.95383067355681   <- z ->   0.0
17:12:41 DEBUG   opendrift:2086: ---------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-09 23:00:00 (before)
                2025-02-10 00:00:00 (after)
17:12:41 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-09 23:00:00) in space  (linearNDFast)
17:12:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:41 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 00:00:00) in space  (linearNDFast)
17:12:41 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:41 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-09 23:00:00, weight 0.31) and
                      after (2025-02-10 00:00:00, weight 0.69) in time
17:12:41 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.03737378447053 and -59.3042380801497 degrees.
17:12:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.03737378447053 and -59.3042380801497 degrees.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:41 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:41 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:41 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.967452 (min) 0.0269035 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.381192 (min) 0.271346 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.380858 (min) -0.264814 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.16787 (min) -6.84815 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.73354 (min) -4.30063 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.93107 (min) 90.165 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.56524 (min) 7.11701 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4968 (min) 34.8777 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00038915 (min) 0.00164077 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:41 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:41 DEBUG   opendrift:694: No elements hit coastline.
17:12:41 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:41 DEBUG   opendrift:1695: No elements to deactivate
17:12:41 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:12:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 0 0]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 3 3]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 338.   0.]
 [  0.   0.   0.   0.   0.]
 [123.   0.   0. 458.   0.]
 [  0.   0. 788.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:41 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:41 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07733544018121272
17:12:41 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:41 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:41 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 1 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:41 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:41 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:41 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 263, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:41 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:41 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:41 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:41 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:41 DEBUG   opendrift:2055: ======================================================================
17:12:41 INFO    opendrift:2056: 2025-02-10 00:11:25.118634 - step 63 of 96 - 500 active elements (0 deactivated)
17:12:41 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:41 DEBUG   opendrift:2064: ======================================================================
17:12:41 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82638548943636
17:12:41 DEBUG   opendrift:2080:                9.949196395026958 <- longitude -> 10.695063039401774
17:12:41 DEBUG   opendrift:2085:                -42.36967984883103   <- z ->   0.0
17:12:41 DEBUG   opendrift:2086: ---------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:41 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:41 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:41 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 00:00:00 (before)
                2025-02-10 01:00:00 (after)
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:43 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:43 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 56x72x7) for time after (2025-02-10 01:00:00)
17:12:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 00:00:00) in space  (linearNDFast)
17:12:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:43 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 01:00:00) in space  (linearNDFast)
17:12:43 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:43 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 00:00:00, weight 0.81) and
                      after (2025-02-10 01:00:00, weight 0.19) in time
17:12:43 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05081472419367 and -59.30494799012985 degrees.
17:12:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05081472419367 and -59.30494799012985 degrees.
17:12:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:43 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:43 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:43 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:43 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:43 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:43 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:43 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:43 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:43 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:43 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:43 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:43 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:43 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.969934 (min) 0.0054396 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.388849 (min) 0.339664 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.353386 (min) -0.213852 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.21506 (min) -6.84797 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.30766 (min) -4.42749 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.77409 (min) 89.5129 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.55399 (min) 7.12044 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5334 (min) 34.8795 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000243744 (min) 0.00162564 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:43 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:43 DEBUG   opendrift:694: No elements hit coastline.
17:12:43 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:43 DEBUG   opendrift:1695: No elements to deactivate
17:12:43 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:43 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:43 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:43 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:43 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 0 2]
17:12:43 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 3 0]
17:12:43 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 340.   0.]
 [  0.   0.   0.   0.   0.]
 [127.   0.   0. 461.   0.]
 [  0.   0. 796.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:43 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:43 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:43 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07999000542395866
17:12:43 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:43 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:43 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:43 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:43 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:43 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:43 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:43 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:43 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:43 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 261, 3, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:43 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:43 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:43 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:43 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:43 DEBUG   opendrift:2055: ======================================================================
17:12:43 INFO    opendrift:2056: 2025-02-10 00:41:25.118634 - step 64 of 96 - 500 active elements (0 deactivated)
17:12:43 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:43 DEBUG   opendrift:2064: ======================================================================
17:12:43 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.83162010082498
17:12:43 DEBUG   opendrift:2080:                9.932420166179261 <- longitude -> 10.693738083565894
17:12:43 DEBUG   opendrift:2085:                -43.03788617340536   <- z ->   0.0
17:12:43 DEBUG   opendrift:2086: ---------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:43 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:43 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:43 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 00:00:00 (before)
                2025-02-10 01:00:00 (after)
17:12:43 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 00:00:00) in space  (linearNDFast)
17:12:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:44 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 01:00:00) in space  (linearNDFast)
17:12:44 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:44 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 00:00:00, weight 0.31) and
                      after (2025-02-10 01:00:00, weight 0.69) in time
17:12:44 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06759094223584 and -59.30627294156414 degrees.
17:12:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06759094223584 and -59.30627294156414 degrees.
17:12:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:44 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:44 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:44 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:44 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:44 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:44 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:44 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:44 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.984089 (min) 0.0270545 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.384417 (min) 0.363578 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.348147 (min) -0.183024 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.24129 (min) -7.0459 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.41728 (min) -4.62209 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.64519 (min) 88.7972 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.53979 (min) 7.12114 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4884 (min) 34.8815 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00037886 (min) 0.00157935 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:44 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:44 DEBUG   opendrift:694: No elements hit coastline.
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift:1695: No elements to deactivate
17:12:44 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0]
17:12:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3]
17:12:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 343.   0.]
 [  0.   0.   0.   0.   0.]
 [127.   0.   0. 467.   0.]
 [  0.   0. 804.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:44 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:44 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08385688746456185
17:12:44 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:44 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:44 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:44 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 3 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:44 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:44 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:44 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [233, 0, 265, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:44 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:44 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:44 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:44 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:44 DEBUG   opendrift:2055: ======================================================================
17:12:44 INFO    opendrift:2056: 2025-02-10 01:11:25.118634 - step 65 of 96 - 500 active elements (0 deactivated)
17:12:44 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:44 DEBUG   opendrift:2064: ======================================================================
17:12:44 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.829642337094555
17:12:44 DEBUG   opendrift:2080:                9.916948283356803 <- longitude -> 10.691396094510996
17:12:44 DEBUG   opendrift:2085:                -43.75020820996563   <- z ->   0.0
17:12:44 DEBUG   opendrift:2086: ---------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:44 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:44 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:44 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 01:00:00 (before)
                2025-02-10 02:00:00 (after)
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:45 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:45 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 57x73x7) for time after (2025-02-10 02:00:00)
17:12:45 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 01:00:00) in space  (linearNDFast)
17:12:45 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:45 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 02:00:00) in space  (linearNDFast)
17:12:45 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:45 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 01:00:00, weight 0.81) and
                      after (2025-02-10 02:00:00, weight 0.19) in time
17:12:45 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08306280940306 and -59.308614933898504 degrees.
17:12:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08306280940306 and -59.308614933898504 degrees.
17:12:45 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:45 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:45 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:45 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:45 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:45 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:45 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:45 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:45 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:45 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:45 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:45 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:45 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:45 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:45 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:45 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.983403 (min) 0.0718078 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.396132 (min) 0.337396 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.356403 (min) -0.167587 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.36637 (min) -7.11369 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.38219 (min) -4.6074 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.52696 (min) 88.0863 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.52544 (min) 7.12282 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5074 (min) 34.8825 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000396459 (min) 0.00158237 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:45 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:45 DEBUG   opendrift:694: No elements hit coastline.
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift:1695: No elements to deactivate
17:12:45 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:45 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:45 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:45 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:45 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 0]
17:12:45 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 3]
17:12:45 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 345.   0.]
 [  0.   0.   0.   0.   0.]
 [130.   0.   0. 469.   0.]
 [  0.   0. 810.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:45 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:45 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:45 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08540058008009611
17:12:45 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:45 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:45 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:45 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 2 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:45 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:45 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:45 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:45 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:12:45 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:45 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:12:45 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:45 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 264, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:45 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:45 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:45 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:45 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:45 DEBUG   opendrift:2055: ======================================================================
17:12:45 INFO    opendrift:2056: 2025-02-10 01:41:25.118634 - step 66 of 96 - 500 active elements (0 deactivated)
17:12:45 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:45 DEBUG   opendrift:2064: ======================================================================
17:12:45 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82884028659442
17:12:45 DEBUG   opendrift:2080:                9.900820018903188 <- longitude -> 10.68756090751546
17:12:45 DEBUG   opendrift:2085:                -44.33494463991133   <- z ->   0.0
17:12:45 DEBUG   opendrift:2086: ---------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:45 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:45 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 01:00:00 (before)
                2025-02-10 02:00:00 (after)
17:12:45 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 01:00:00) in space  (linearNDFast)
17:12:45 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:45 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 02:00:00) in space  (linearNDFast)
17:12:45 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:45 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 01:00:00, weight 0.31) and
                      after (2025-02-10 02:00:00, weight 0.69) in time
17:12:45 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.099191094966244 and -59.312450125464835 degrees.
17:12:45 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.099191094966244 and -59.312450125464835 degrees.
17:12:45 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:45 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:45 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:45 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:45 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:45 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:45 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:45 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:45 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:46 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:46 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:46 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:46 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:46 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:46 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:46 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:46 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:46 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:46 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.997485 (min) 0.0790095 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.439581 (min) 0.591027 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.385553 (min) -0.176413 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.60743 (min) -7.38481 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -6.11162 (min) -4.46227 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.42628 (min) 87.2087 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.51218 (min) 7.12228 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5033 (min) 34.8827 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00028426 (min) 0.00159992 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:46 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:46 DEBUG   opendrift:694: No elements hit coastline.
17:12:46 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:46 DEBUG   opendrift:1695: No elements to deactivate
17:12:46 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:46 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:46 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:46 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:12:46 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 0 2]
17:12:46 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 3 0]
17:12:46 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 348.   0.]
 [  0.   0.   0.   0.   0.]
 [134.   0.   0. 470.   0.]
 [  0.   0. 813.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:46 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:46 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:46 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08563880124173313
17:12:46 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:46 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:46 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:46 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:46 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:46 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:46 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
17:12:46 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
17:12:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:46 INFO    opendrift.models.chemicaldrift:1861: partitioning: [235, 0, 263, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:46 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:46 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:46 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:46 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:46 DEBUG   opendrift:2055: ======================================================================
17:12:46 INFO    opendrift:2056: 2025-02-10 02:11:25.118634 - step 67 of 96 - 500 active elements (0 deactivated)
17:12:46 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:46 DEBUG   opendrift:2064: ======================================================================
17:12:46 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.82920988115683
17:12:46 DEBUG   opendrift:2080:                9.886670028382152 <- longitude -> 10.68262747583748
17:12:46 DEBUG   opendrift:2085:                -44.41497465159395   <- z ->   0.0
17:12:46 DEBUG   opendrift:2086: ---------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:46 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:46 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:46 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 02:00:00 (before)
                2025-02-10 03:00:00 (after)
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:47 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:47 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 58x74x7) for time after (2025-02-10 03:00:00)
17:12:47 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 02:00:00) in space  (linearNDFast)
17:12:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:47 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 03:00:00) in space  (linearNDFast)
17:12:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:12:47 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 02:00:00, weight 0.81) and
                      after (2025-02-10 03:00:00, weight 0.19) in time
17:12:47 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.113341083262426 and -59.31738354428632 degrees.
17:12:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.113341083262426 and -59.31738354428632 degrees.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.02633 (min) 0.193831 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.439022 (min) 0.493931 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.418068 (min) -0.196333 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.84023 (min) -7.49614 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.74461 (min) -4.1884 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.35061 (min) 86.0601 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.50034 (min) 7.11914 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5284 (min) 34.8836 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000398508 (min) 0.00149333 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:47 DEBUG   opendrift:694: No elements hit coastline.
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift:1695: No elements to deactivate
17:12:47 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:12:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 350.   0.]
 [  0.   0.   0.   0.   0.]
 [135.   0.   0. 474.   0.]
 [  0.   0. 820.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:47 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:47 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08620128081838756
17:12:47 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:47 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:47 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 264, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:47 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:47 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:47 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:47 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:47 DEBUG   opendrift:2055: ======================================================================
17:12:47 INFO    opendrift:2056: 2025-02-10 02:41:25.118634 - step 68 of 96 - 500 active elements (0 deactivated)
17:12:47 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:47 DEBUG   opendrift:2064: ======================================================================
17:12:47 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.829865658576736
17:12:47 DEBUG   opendrift:2080:                9.871917215597248 <- longitude -> 10.679147446266256
17:12:47 DEBUG   opendrift:2085:                -44.090333220836406   <- z ->   0.0
17:12:47 DEBUG   opendrift:2086: ---------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 02:00:00 (before)
                2025-02-10 03:00:00 (after)
17:12:47 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 02:00:00) in space  (linearNDFast)
17:12:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:47 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 03:00:00) in space  (linearNDFast)
17:12:47 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:47 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 02:00:00, weight 0.31) and
                      after (2025-02-10 03:00:00, weight 0.69) in time
17:12:47 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.128093908029385 and -59.32086358622118 degrees.
17:12:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.128093908029385 and -59.32086358622118 degrees.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:47 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:47 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:47 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:47 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:47 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.04605 (min) 0.305956 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.416096 (min) 0.592047 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.458648 (min) -0.23533 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.96495 (min) -7.45804 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.25644 (min) -3.76517 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.28614 (min) 85.1681 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.48873 (min) 7.11663 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5329 (min) 34.884 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000709298 (min) 0.00151774 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:47 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:47 DEBUG   opendrift:694: No elements hit coastline.
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift:1695: No elements to deactivate
17:12:47 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 353.   0.]
 [  0.   0.   0.   0.   0.]
 [137.   0.   0. 476.   0.]
 [  0.   0. 824.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:47 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:47 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08514525738151306
17:12:47 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:47 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:47 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:47 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:47 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:47 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:48 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:48 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:48 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:48 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:48 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:48 INFO    opendrift.models.chemicaldrift:1861: partitioning: [233, 0, 265, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:48 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:48 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:48 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:48 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:48 DEBUG   opendrift:2055: ======================================================================
17:12:48 INFO    opendrift:2056: 2025-02-10 03:11:25.118634 - step 69 of 96 - 500 active elements (0 deactivated)
17:12:48 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:48 DEBUG   opendrift:2064: ======================================================================
17:12:48 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82876942963269
17:12:48 DEBUG   opendrift:2080:                9.854850723838219 <- longitude -> 10.674947054264813
17:12:48 DEBUG   opendrift:2085:                -43.763832024465465   <- z ->   0.0
17:12:48 DEBUG   opendrift:2086: ---------------------------------
17:12:48 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:48 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:48 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:48 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:48 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:48 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:48 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:48 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 03:00:00 (before)
                2025-02-10 04:00:00 (after)
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:49 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:49 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 60x75x7) for time after (2025-02-10 04:00:00)
17:12:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 03:00:00) in space  (linearNDFast)
17:12:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 04:00:00) in space  (linearNDFast)
17:12:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 03:00:00, weight 0.81) and
                      after (2025-02-10 04:00:00, weight 0.19) in time
17:12:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.14516039571976 and -59.3250639704882 degrees.
17:12:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.14516039571976 and -59.3250639704882 degrees.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.05716 (min) 0.244962 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.434987 (min) 0.709806 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.499463 (min) -0.27657 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.0161 (min) -7.47219 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.85234 (min) -3.51183 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.22981 (min) 84.1685 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.47542 (min) 7.11456 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.53 (min) 34.8841 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000540757 (min) 0.00144722 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:49 DEBUG   opendrift:694: No elements hit coastline.
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift:1695: No elements to deactivate
17:12:49 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 353.   0.]
 [  0.   0.   0.   0.   0.]
 [138.   0.   0. 481.   0.]
 [  0.   0. 832.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:49 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:49 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08420310532627708
17:12:49 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:49 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:49 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:49 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
17:12:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
17:12:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 265, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:49 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:49 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:49 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift:2055: ======================================================================
17:12:49 INFO    opendrift:2056: 2025-02-10 03:41:25.118634 - step 70 of 96 - 500 active elements (0 deactivated)
17:12:49 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:49 DEBUG   opendrift:2064: ======================================================================
17:12:49 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82718604312373
17:12:49 DEBUG   opendrift:2080:                9.837897883806148 <- longitude -> 10.66426921654126
17:12:49 DEBUG   opendrift:2085:                -43.745509136188836   <- z ->   0.0
17:12:49 DEBUG   opendrift:2086: ---------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 03:00:00 (before)
                2025-02-10 04:00:00 (after)
17:12:49 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 03:00:00) in space  (linearNDFast)
17:12:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:49 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 04:00:00) in space  (linearNDFast)
17:12:49 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:49 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 03:00:00, weight 0.31) and
                      after (2025-02-10 04:00:00, weight 0.69) in time
17:12:49 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.16211322360947 and -59.33574180809269 degrees.
17:12:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.16211322360947 and -59.33574180809269 degrees.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:49 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:49 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:49 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.06167 (min) 0.36173 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.438919 (min) 0.756305 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.538699 (min) -0.321516 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -9.99325 (min) -7.55203 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.53205 (min) -3.3923 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.18056 (min) 82.9927 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.46106 (min) 7.12232 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5325 (min) 34.886 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000660604 (min) 0.00147305 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:49 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:49 DEBUG   opendrift:694: No elements hit coastline.
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift:1695: No elements to deactivate
17:12:49 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 354.   0.]
 [  0.   0.   0.   0.   0.]
 [139.   0.   0. 485.   0.]
 [  0.   0. 837.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:49 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:49 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08408745459397365
17:12:49 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:49 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:49 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:49 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:49 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
17:12:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
17:12:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 265, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:49 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:49 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:49 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:49 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:49 DEBUG   opendrift:2055: ======================================================================
17:12:49 INFO    opendrift:2056: 2025-02-10 04:11:25.118634 - step 71 of 96 - 500 active elements (0 deactivated)
17:12:49 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:49 DEBUG   opendrift:2064: ======================================================================
17:12:49 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.825511382542224
17:12:49 DEBUG   opendrift:2080:                9.822075353271822 <- longitude -> 10.664582729096777
17:12:49 DEBUG   opendrift:2085:                -44.79449899630685   <- z ->   0.0
17:12:49 DEBUG   opendrift:2086: ---------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:49 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:49 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:49 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 04:00:00 (before)
                2025-02-10 05:00:00 (after)
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:51 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:51 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 62x77x7) for time after (2025-02-10 05:00:00)
17:12:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 04:00:00) in space  (linearNDFast)
17:12:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 05:00:00) in space  (linearNDFast)
17:12:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
17:12:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 04:00:00, weight 0.81) and
                      after (2025-02-10 05:00:00, weight 0.19) in time
17:12:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.177935775715454 and -59.33542829726978 degrees.
17:12:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.177935775715454 and -59.33542829726978 degrees.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.072 (min) 0.112272 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.434299 (min) 0.866377 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.579495 (min) -0.366602 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.0096 (min) -7.59432 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.44216 (min) -3.36992 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.13451 (min) 81.8501 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.44719 (min) 7.1237 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.3985 (min) 34.8852 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000776673 (min) 0.00156043 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:51 DEBUG   opendrift:694: No elements hit coastline.
17:12:51 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:51 DEBUG   opendrift:1695: No elements to deactivate
17:12:51 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2 0]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0 3]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 357.   0.]
 [  0.   0.   0.   0.   0.]
 [142.   0.   0. 488.   0.]
 [  0.   0. 841.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:51 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:51 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08465231369909663
17:12:51 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:51 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:51 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:51 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 265, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:51 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:51 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:51 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift:2055: ======================================================================
17:12:51 INFO    opendrift:2056: 2025-02-10 04:41:25.118634 - step 72 of 96 - 500 active elements (0 deactivated)
17:12:51 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:51 DEBUG   opendrift:2064: ======================================================================
17:12:51 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.82813832853593
17:12:51 DEBUG   opendrift:2080:                9.804891712874294 <- longitude -> 10.662039085335614
17:12:51 DEBUG   opendrift:2085:                -45.92311732430515   <- z ->   0.0
17:12:51 DEBUG   opendrift:2086: ---------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 04:00:00 (before)
                2025-02-10 05:00:00 (after)
17:12:51 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 04:00:00) in space  (linearNDFast)
17:12:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:51 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 05:00:00) in space  (linearNDFast)
17:12:51 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:51 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 04:00:00, weight 0.31) and
                      after (2025-02-10 05:00:00, weight 0.69) in time
17:12:51 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.19511941584857 and -59.33797194820843 degrees.
17:12:51 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.19511941584857 and -59.33797194820843 degrees.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:51 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:51 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:51 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:51 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:51 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.08688 (min) 0.134626 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.441457 (min) 0.638262 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.622694 (min) -0.411706 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.1238 (min) -7.8097 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.72423 (min) -3.53973 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.09113 (min) 80.6558 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.42791 (min) 7.12477 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5452 (min) 34.8873 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00054941 (min) 0.00156494 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:51 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:51 DEBUG   opendrift:694: No elements hit coastline.
17:12:51 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:51 DEBUG   opendrift:1695: No elements to deactivate
17:12:51 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:51 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:51 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:51 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:12:51 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 358.   0.]
 [  0.   0.   0.   0.   0.]
 [143.   0.   0. 491.   0.]
 [  0.   0. 847.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:51 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:51 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:51 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.0852206538354807
17:12:51 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:51 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:51 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:51 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:51 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:51 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [234, 0, 265, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:51 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:51 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:51 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:51 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:51 DEBUG   opendrift:2055: ======================================================================
17:12:51 INFO    opendrift:2056: 2025-02-10 05:11:25.118634 - step 73 of 96 - 500 active elements (0 deactivated)
17:12:51 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:51 DEBUG   opendrift:2064: ======================================================================
17:12:51 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.8310637423944
17:12:51 DEBUG   opendrift:2080:                9.787987483660633 <- longitude -> 10.65557751189761
17:12:51 DEBUG   opendrift:2085:                -47.26189826922759   <- z ->   0.0
17:12:51 DEBUG   opendrift:2086: ---------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:51 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:51 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:51 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 05:00:00 (before)
                2025-02-10 06:00:00 (after)
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:53 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:53 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 64x79x7) for time after (2025-02-10 06:00:00)
17:12:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 05:00:00) in space  (linearNDFast)
17:12:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 06:00:00) in space  (linearNDFast)
17:12:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
17:12:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 05:00:00, weight 0.81) and
                      after (2025-02-10 06:00:00, weight 0.19) in time
17:12:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.212023639831436 and -59.34443351033573 degrees.
17:12:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.212023639831436 and -59.34443351033573 degrees.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.07308 (min) 0.170179 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.422836 (min) 0.440706 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.663875 (min) -0.456799 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.2668 (min) -8.02212 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.93203 (min) -3.76799 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 8.03189 (min) 78.1287 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.41567 (min) 7.13562 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5667 (min) 34.8902 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000593534 (min) 0.0015493 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:53 DEBUG   opendrift:694: No elements hit coastline.
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift:1695: No elements to deactivate
17:12:53 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 359.   0.]
 [  0.   0.   0.   0.   0.]
 [146.   0.   0. 496.   0.]
 [  0.   0. 853.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:53 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:53 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08739719510991713
17:12:53 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:53 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:53 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 263, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:53 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:53 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:53 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:53 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:53 DEBUG   opendrift:2055: ======================================================================
17:12:53 INFO    opendrift:2056: 2025-02-10 05:41:25.118634 - step 74 of 96 - 500 active elements (0 deactivated)
17:12:53 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:53 DEBUG   opendrift:2064: ======================================================================
17:12:53 DEBUG   opendrift:2075:                57.615312922158985 <- latitude  -> 57.83297406804327
17:12:53 DEBUG   opendrift:2080:                9.775228222747248 <- longitude -> 10.642780253568354
17:12:53 DEBUG   opendrift:2085:                -48.522444580110154   <- z ->   0.0
17:12:53 DEBUG   opendrift:2086: ---------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 05:00:00 (before)
                2025-02-10 06:00:00 (after)
17:12:53 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 05:00:00) in space  (linearNDFast)
17:12:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:53 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 06:00:00) in space  (linearNDFast)
17:12:53 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:53 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 05:00:00, weight 0.31) and
                      after (2025-02-10 06:00:00, weight 0.69) in time
17:12:53 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.22478291158369 and -59.35723076995888 degrees.
17:12:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.22478291158369 and -59.35723076995888 degrees.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:53 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:53 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:53 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:53 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:53 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.07989 (min) 0.180819 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.399477 (min) 0.312455 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.702378 (min) -0.502098 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.4252 (min) -8.40361 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -5.01983 (min) -3.91932 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.99353 (min) 77.2129 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.39012 (min) 7.141 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5064 (min) 34.895 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000556158 (min) 0.00219011 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:53 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:53 DEBUG   opendrift:694: No elements hit coastline.
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift:1695: No elements to deactivate
17:12:53 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:12:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 0 2]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 0]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 362.   0.]
 [  0.   0.   0.   0.   0.]
 [149.   0.   0. 501.   0.]
 [  0.   0. 859.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:53 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:53 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09084251226124482
17:12:53 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:53 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:53 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:53 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:53 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
17:12:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
17:12:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [236, 0, 263, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:53 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:53 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:53 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:53 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:53 DEBUG   opendrift:2055: ======================================================================
17:12:53 INFO    opendrift:2056: 2025-02-10 06:11:25.118634 - step 75 of 96 - 500 active elements (0 deactivated)
17:12:53 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:53 DEBUG   opendrift:2064: ======================================================================
17:12:53 DEBUG   opendrift:2075:                57.61531292215899 <- latitude  -> 57.83604330681856
17:12:53 DEBUG   opendrift:2080:                9.756937524494138 <- longitude -> 10.640392477219171
17:12:53 DEBUG   opendrift:2085:                -49.547682813348494   <- z ->   0.0
17:12:53 DEBUG   opendrift:2086: ---------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:53 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:53 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:53 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:53 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 06:00:00 (before)
                2025-02-10 07:00:00 (after)
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:55 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:55 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 66x81x7) for time after (2025-02-10 07:00:00)
17:12:55 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 06:00:00) in space  (linearNDFast)
17:12:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:55 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 07:00:00) in space  (linearNDFast)
17:12:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:55 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 06:00:00, weight 0.81) and
                      after (2025-02-10 07:00:00, weight 0.19) in time
17:12:55 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.24307360815711 and -59.359618563986565 degrees.
17:12:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.24307360815711 and -59.359618563986565 degrees.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.08465 (min) 0.228987 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.427359 (min) 0.307194 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.742314 (min) -0.54714 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.6995 (min) -8.71294 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.88576 (min) -3.92171 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.90806 (min) 76.4479 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.38645 (min) 7.14206 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5928 (min) 34.8975 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000517475 (min) 0.00180962 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:55 DEBUG   opendrift:694: No elements hit coastline.
17:12:55 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:55 DEBUG   opendrift:1695: No elements to deactivate
17:12:55 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:12:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2 2 0 2]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0 0 3 0]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 364.   0.]
 [  0.   0.   0.   0.   0.]
 [155.   0.   0. 505.   0.]
 [  0.   0. 866.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:55 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:55 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09564531156884148
17:12:55 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:55 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:55 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
17:12:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
17:12:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [240, 0, 259, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:55 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:55 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:55 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift:2055: ======================================================================
17:12:55 INFO    opendrift:2056: 2025-02-10 06:41:25.118634 - step 76 of 96 - 500 active elements (0 deactivated)
17:12:55 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:55 DEBUG   opendrift:2064: ======================================================================
17:12:55 DEBUG   opendrift:2075:                57.61524383584928 <- latitude  -> 57.83696931739511
17:12:55 DEBUG   opendrift:2080:                9.73980881202914 <- longitude -> 10.647306736219356
17:12:55 DEBUG   opendrift:2085:                -49.99463730113263   <- z ->   0.0
17:12:55 DEBUG   opendrift:2086: ---------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 06:00:00 (before)
                2025-02-10 07:00:00 (after)
17:12:55 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 06:00:00) in space  (linearNDFast)
17:12:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:55 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 07:00:00) in space  (linearNDFast)
17:12:55 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:55 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 06:00:00, weight 0.31) and
                      after (2025-02-10 07:00:00, weight 0.69) in time
17:12:55 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.26020231445411 and -59.352704302024875 degrees.
17:12:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.26020231445411 and -59.352704302024875 degrees.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:55 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:55 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:55 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.06261 (min) 0.263513 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.420508 (min) 0.330265 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.784217 (min) -0.591852 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.1954 (min) -8.85304 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.58768 (min) -3.48566 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.87538 (min) 75.8104 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.35635 (min) 7.14714 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.59 (min) 34.8982 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000534538 (min) 0.00170234 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:55 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:55 DEBUG   opendrift:694: No elements hit coastline.
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift:1695: No elements to deactivate
17:12:55 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:12:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 365.   0.]
 [  0.   0.   0.   0.   0.]
 [159.   0.   0. 512.   0.]
 [  0.   0. 875.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:55 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:55 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.10350642631906457
17:12:55 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:55 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:55 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:55 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:55 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:55 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [243, 0, 256, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:55 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:55 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:55 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:55 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:55 DEBUG   opendrift:2055: ======================================================================
17:12:55 INFO    opendrift:2056: 2025-02-10 07:11:25.118634 - step 77 of 96 - 500 active elements (0 deactivated)
17:12:55 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:55 DEBUG   opendrift:2064: ======================================================================
17:12:55 DEBUG   opendrift:2075:                57.614351815009236 <- latitude  -> 57.83710608991546
17:12:55 DEBUG   opendrift:2080:                9.72372371446901 <- longitude -> 10.655264686404076
17:12:55 DEBUG   opendrift:2085:                -50.6078243668011   <- z ->   0.0
17:12:55 DEBUG   opendrift:2086: ---------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:55 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:55 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:55 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 07:00:00 (before)
                2025-02-10 08:00:00 (after)
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:57 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:57 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 67x84x8) for time after (2025-02-10 08:00:00)
17:12:57 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 07:00:00) in space  (linearNDFast)
17:12:57 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:57 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 08:00:00) in space  (linearNDFast)
17:12:57 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:57 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 07:00:00, weight 0.81) and
                      after (2025-02-10 08:00:00, weight 0.19) in time
17:12:57 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.2762874112557 and -59.34474634848826 degrees.
17:12:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.2762874112557 and -59.34474634848826 degrees.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:57 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.06875 (min) 0.276409 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.443564 (min) 0.427453 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.817344 (min) -0.632242 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.4637 (min) -8.89935 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.45874 (min) -3.24003 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.79116 (min) 78.2238 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.34889 (min) 7.14713 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4691 (min) 34.8979 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000550678 (min) 0.0017796 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:57 DEBUG   opendrift:694: No elements hit coastline.
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift:1695: No elements to deactivate
17:12:57 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [159.   0.   0. 517.   0.]
 [  0.   0. 881.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:57 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:57 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.1074519175301137
17:12:57 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:57 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:57 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [242, 0, 257, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:57 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:57 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:57 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift:2055: ======================================================================
17:12:57 INFO    opendrift:2056: 2025-02-10 07:41:25.118634 - step 78 of 96 - 500 active elements (0 deactivated)
17:12:57 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:57 DEBUG   opendrift:2064: ======================================================================
17:12:57 DEBUG   opendrift:2075:                57.613630204900474 <- latitude  -> 57.840427751160824
17:12:57 DEBUG   opendrift:2080:                9.708783721719485 <- longitude -> 10.663613682214994
17:12:57 DEBUG   opendrift:2085:                -51.26605477681707   <- z ->   0.0
17:12:57 DEBUG   opendrift:2086: ---------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 07:00:00 (before)
                2025-02-10 08:00:00 (after)
17:12:57 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 07:00:00) in space  (linearNDFast)
17:12:57 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:57 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 08:00:00) in space  (linearNDFast)
17:12:57 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:57 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 07:00:00, weight 0.31) and
                      after (2025-02-10 08:00:00, weight 0.69) in time
17:12:57 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.29122740802898 and -59.336397356689886 degrees.
17:12:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.29122740802898 and -59.336397356689886 degrees.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:57 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:57 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:57 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:57 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:57 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.07423 (min) 0.401439 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.448199 (min) 0.483288 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.834794 (min) -0.655645 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.366 (min) -8.83709 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.54755 (min) -3.30461 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.7641 (min) 76.8679 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.33131 (min) 7.14833 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4903 (min) 34.897 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000512733 (min) 0.00173551 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:57 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:57 DEBUG   opendrift:694: No elements hit coastline.
17:12:57 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:57 DEBUG   opendrift:1695: No elements to deactivate
17:12:57 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:12:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [163.   0.   0. 524.   0.]
 [  0.   0. 889.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:57 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:57 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.1046131753717195
17:12:57 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:57 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:57 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:57 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:57 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:12:57 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:12:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
17:12:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
17:12:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [246, 0, 253, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:57 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:57 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:57 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:57 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:57 DEBUG   opendrift:2055: ======================================================================
17:12:57 INFO    opendrift:2056: 2025-02-10 08:11:25.118634 - step 79 of 96 - 500 active elements (0 deactivated)
17:12:57 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:57 DEBUG   opendrift:2064: ======================================================================
17:12:57 DEBUG   opendrift:2075:                57.61274788109038 <- latitude  -> 57.841040666540216
17:12:57 DEBUG   opendrift:2080:                9.695770035337928 <- longitude -> 10.675741871714015
17:12:57 DEBUG   opendrift:2085:                -51.3131534722044   <- z ->   0.0
17:12:57 DEBUG   opendrift:2086: ---------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:57 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:57 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:57 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:57 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 08:00:00 (before)
                2025-02-10 09:00:00 (after)
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:12:59 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:12:59 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 69x87x8) for time after (2025-02-10 09:00:00)
17:12:59 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 08:00:00) in space  (linearNDFast)
17:12:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:59 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 09:00:00) in space  (linearNDFast)
17:12:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:59 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 08:00:00, weight 0.81) and
                      after (2025-02-10 09:00:00, weight 0.19) in time
17:12:59 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3042410908797 and -59.32426915345919 degrees.
17:12:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3042410908797 and -59.32426915345919 degrees.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:59 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.08795 (min) 0.23598 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.479733 (min) 0.584027 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.840505 (min) -0.659885 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.3942 (min) -8.61657 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.47959 (min) -3.26056 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.7378 (min) 80.9528 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.31423 (min) 7.15345 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4741 (min) 34.8959 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000485825 (min) 0.00179617 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:59 DEBUG   opendrift:694: No elements hit coastline.
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift:1695: No elements to deactivate
17:12:59 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [164.   0.   0. 532.   0.]
 [  0.   0. 897.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:59 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:59 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.1044813480823792
17:12:59 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:59 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:59 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:59 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:12:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
17:12:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
17:12:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [247, 0, 252, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:59 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:59 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:59 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift:2055: ======================================================================
17:12:59 INFO    opendrift:2056: 2025-02-10 08:41:25.118634 - step 80 of 96 - 500 active elements (0 deactivated)
17:12:59 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:59 DEBUG   opendrift:2064: ======================================================================
17:12:59 DEBUG   opendrift:2075:                57.60640960568186 <- latitude  -> 57.84326033138635
17:12:59 DEBUG   opendrift:2080:                9.682344737084943 <- longitude -> 10.682873094519511
17:12:59 DEBUG   opendrift:2085:                -51.59876459762631   <- z ->   0.0
17:12:59 DEBUG   opendrift:2086: ---------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 08:00:00 (before)
                2025-02-10 09:00:00 (after)
17:12:59 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 08:00:00) in space  (linearNDFast)
17:12:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:59 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 09:00:00) in space  (linearNDFast)
17:12:59 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:12:59 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 08:00:00, weight 0.31) and
                      after (2025-02-10 09:00:00, weight 0.69) in time
17:12:59 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:12:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.31766640728607 and -59.31713793324397 degrees.
17:12:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.31766640728607 and -59.31713793324397 degrees.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:12:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:12:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:12:59 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:12:59 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:12:59 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:12:59 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.09585 (min) 0.134161 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.490375 (min) 0.520735 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.823725 (min) -0.642925 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.5082 (min) -8.3022 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -4.17015 (min) -2.98808 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.70248 (min) 81.4259 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.30225 (min) 7.15347 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5836 (min) 34.8954 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000680067 (min) 0.00163957 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:12:59 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:12:59 DEBUG   opendrift:694: No elements hit coastline.
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift:1695: No elements to deactivate
17:12:59 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:12:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:12:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:12:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:12:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [165.   0.   0. 543.   0.]
 [  0.   0. 908.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:12:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:12:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:12:59 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:12:59 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.10658790156399608
17:12:59 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:12:59 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:12:59 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:12:59 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:59 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:12:59 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:12:59 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:12:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:12:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:12:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:12:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:12:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [248, 0, 251, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:12:59 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:12:59 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:12:59 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:12:59 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:12:59 DEBUG   opendrift:2055: ======================================================================
17:12:59 INFO    opendrift:2056: 2025-02-10 09:11:25.118634 - step 81 of 96 - 500 active elements (0 deactivated)
17:12:59 DEBUG   opendrift:2062: 0 elements scheduled.
17:12:59 DEBUG   opendrift:2064: ======================================================================
17:12:59 DEBUG   opendrift:2075:                57.59848317503366 <- latitude  -> 57.84481984301746
17:12:59 DEBUG   opendrift:2080:                9.673435212044222 <- longitude -> 10.685118590451163
17:12:59 DEBUG   opendrift:2085:                -52.025083424772745   <- z ->   0.0
17:12:59 DEBUG   opendrift:2086: ---------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:12:59 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:12:59 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:12:59 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:12:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 09:00:00 (before)
                2025-02-10 10:00:00 (after)
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:01 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:01 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 74x87x8) for time after (2025-02-10 10:00:00)
17:13:01 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 09:00:00) in space  (linearNDFast)
17:13:01 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:01 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 10:00:00) in space  (linearNDFast)
17:13:01 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:01 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 09:00:00, weight 0.81) and
                      after (2025-02-10 10:00:00, weight 0.19) in time
17:13:01 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.32657593422582 and -59.31489243063904 degrees.
17:13:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.32657593422582 and -59.31489243063904 degrees.
17:13:01 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:01 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:01 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:01 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:01 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:01 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:01 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:01 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:01 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:01 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:01 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:01 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:01 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:01 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:01 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.05622 (min) 0.149722 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.533045 (min) 0.506706 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.792347 (min) -0.610852 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.4062 (min) -7.96446 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.95279 (min) -2.64599 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.66874 (min) 83.7253 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.29189 (min) 7.15547 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4902 (min) 34.8948 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00053669 (min) 0.00176981 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:01 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:01 DEBUG   opendrift:694: No elements hit coastline.
17:13:01 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift:1695: No elements to deactivate
17:13:02 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
17:13:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [167.   0.   0. 549.   0.]
 [  0.   0. 914.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:02 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:02 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.10437835051035954
17:13:02 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:02 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:02 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:02 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 1 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:13:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:13:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [250, 0, 249, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:02 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:02 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:02 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift:2055: ======================================================================
17:13:02 INFO    opendrift:2056: 2025-02-10 09:41:25.118634 - step 82 of 96 - 500 active elements (0 deactivated)
17:13:02 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:02 DEBUG   opendrift:2064: ======================================================================
17:13:02 DEBUG   opendrift:2075:                57.58986687596082 <- latitude  -> 57.84430430205177
17:13:02 DEBUG   opendrift:2080:                9.662209126633316 <- longitude -> 10.680957039083381
17:13:02 DEBUG   opendrift:2085:                -52.458706134739984   <- z ->   0.0
17:13:02 DEBUG   opendrift:2086: ---------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 09:00:00 (before)
                2025-02-10 10:00:00 (after)
17:13:02 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 09:00:00) in space  (linearNDFast)
17:13:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:02 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 10:00:00) in space  (linearNDFast)
17:13:02 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:02 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 09:00:00, weight 0.31) and
                      after (2025-02-10 10:00:00, weight 0.69) in time
17:13:02 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.33780201103787 and -59.319053978166714 degrees.
17:13:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.33780201103787 and -59.319053978166714 degrees.
17:13:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:02 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:02 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:02 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:02 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:02 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.981665 (min) 0.0803571 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.543886 (min) 0.348967 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.736799 (min) -0.55473 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.252 (min) -7.64243 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.53504 (min) -2.23819 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.62364 (min) 83.5623 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.28671 (min) 7.1442 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5751 (min) 34.8939 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00058756 (min) 0.00152199 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:02 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:02 DEBUG   opendrift:694: No elements hit coastline.
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift:1695: No elements to deactivate
17:13:02 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:13:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 0 2]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 3 0]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 367.   0.]
 [  0.   0.   0.   0.   0.]
 [172.   0.   0. 552.   0.]
 [  0.   0. 917.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:02 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:02 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09994828986248357
17:13:02 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:02 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:02 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:02 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:02 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
17:13:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
17:13:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [254, 0, 245, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:02 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:02 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:02 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:02 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:02 DEBUG   opendrift:2055: ======================================================================
17:13:02 INFO    opendrift:2056: 2025-02-10 10:11:25.118634 - step 83 of 96 - 500 active elements (0 deactivated)
17:13:02 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:02 DEBUG   opendrift:2064: ======================================================================
17:13:02 DEBUG   opendrift:2075:                57.581075495781675 <- latitude  -> 57.84384480697457
17:13:02 DEBUG   opendrift:2080:                9.65330814302312 <- longitude -> 10.674090790460998
17:13:02 DEBUG   opendrift:2085:                -52.234192066631365   <- z ->   0.0
17:13:02 DEBUG   opendrift:2086: ---------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:02 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:02 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:02 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 10:00:00 (before)
                2025-02-10 11:00:00 (after)
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:04 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:04 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 80x88x8) for time after (2025-02-10 11:00:00)
17:13:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 10:00:00) in space  (linearNDFast)
17:13:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 11:00:00) in space  (linearNDFast)
17:13:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 10:00:00, weight 0.81) and
                      after (2025-02-10 11:00:00, weight 0.19) in time
17:13:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.346703003758755 and -59.325920227398946 degrees.
17:13:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.346703003758755 and -59.325920227398946 degrees.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.081 (min) 0.0880459 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.544844 (min) 0.298137 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.673775 (min) -0.49213 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.3511 (min) -7.35521 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.30028 (min) -2.07301 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.58554 (min) 81.9797 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27808 (min) 7.16021 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5203 (min) 34.8931 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000631208 (min) 0.00163178 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:04 DEBUG   opendrift:694: No elements hit coastline.
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift:1695: No elements to deactivate
17:13:04 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:13:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 368.   0.]
 [  0.   0.   0.   0.   0.]
 [174.   0.   0. 558.   0.]
 [  0.   0. 924.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:04 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:04 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.10077915483109434
17:13:04 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:04 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:04 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
17:13:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
17:13:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [255, 0, 244, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:04 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:04 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:04 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:04 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:04 DEBUG   opendrift:2055: ======================================================================
17:13:04 INFO    opendrift:2056: 2025-02-10 10:41:25.118634 - step 84 of 96 - 500 active elements (0 deactivated)
17:13:04 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:04 DEBUG   opendrift:2064: ======================================================================
17:13:04 DEBUG   opendrift:2075:                57.57226874023594 <- latitude  -> 57.847077469529346
17:13:04 DEBUG   opendrift:2080:                9.647546255786292 <- longitude -> 10.662052364481998
17:13:04 DEBUG   opendrift:2085:                -51.89108765752059   <- z ->   0.0
17:13:04 DEBUG   opendrift:2086: ---------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 10:00:00 (before)
                2025-02-10 11:00:00 (after)
17:13:04 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 10:00:00) in space  (linearNDFast)
17:13:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:04 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 11:00:00) in space  (linearNDFast)
17:13:04 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:04 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 10:00:00, weight 0.31) and
                      after (2025-02-10 11:00:00, weight 0.69) in time
17:13:04 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.35246487847446 and -59.33795865625154 degrees.
17:13:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.35246487847446 and -59.33795865625154 degrees.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:04 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:04 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:04 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.01314 (min) 0.0295528 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.542766 (min) 0.236411 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.600002 (min) -0.418444 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.2565 (min) -7.27438 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.22004 (min) -2.19811 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.5233 (min) 80.3694 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27686 (min) 7.15576 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5595 (min) 34.889 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000614657 (min) 0.00168061 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:04 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:04 DEBUG   opendrift:694: No elements hit coastline.
17:13:04 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:04 DEBUG   opendrift:1695: No elements to deactivate
17:13:04 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
17:13:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 370.   0.]
 [  0.   0.   0.   0.   0.]
 [175.   0.   0. 563.   0.]
 [  0.   0. 930.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:04 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:04 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09850411378770788
17:13:04 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:04 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:04 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:04 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:04 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:04 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
17:13:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
17:13:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [254, 0, 245, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:04 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:04 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:04 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:04 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:04 DEBUG   opendrift:2055: ======================================================================
17:13:04 INFO    opendrift:2056: 2025-02-10 11:11:25.118634 - step 85 of 96 - 500 active elements (0 deactivated)
17:13:04 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:04 DEBUG   opendrift:2064: ======================================================================
17:13:04 DEBUG   opendrift:2075:                57.56369634182258 <- latitude  -> 57.849187090872135
17:13:04 DEBUG   opendrift:2080:                9.639614445170249 <- longitude -> 10.649990699711427
17:13:04 DEBUG   opendrift:2085:                -51.63949435315504   <- z ->   0.0
17:13:04 DEBUG   opendrift:2086: ---------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:04 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:04 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:04 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 11:00:00 (before)
                2025-02-10 12:00:00 (after)
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:06 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:06 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 82x89x8) for time after (2025-02-10 12:00:00)
17:13:06 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 11:00:00) in space  (linearNDFast)
17:13:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:06 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 12:00:00) in space  (linearNDFast)
17:13:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:06 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 11:00:00, weight 0.81) and
                      after (2025-02-10 12:00:00, weight 0.19) in time
17:13:06 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.36039668699687 and -59.35002032152699 degrees.
17:13:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.36039668699687 and -59.35002032152699 degrees.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.979785 (min) 0.0182966 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.543164 (min) 0.20939 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.536111 (min) -0.350306 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -11.1099 (min) -7.24553 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.17045 (min) -2.1662 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.46897 (min) 78.8357 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27886 (min) 7.17196 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5503 (min) 34.892 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000675099 (min) 0.00148772 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:06 DEBUG   opendrift:694: No elements hit coastline.
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift:1695: No elements to deactivate
17:13:06 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
17:13:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 370.   0.]
 [  0.   0.   0.   0.   0.]
 [176.   0.   0. 564.   0.]
 [  0.   0. 933.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:06 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:06 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09600382954507364
17:13:06 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:06 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:06 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
17:13:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
17:13:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [255, 0, 244, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:06 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:06 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:06 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:06 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:06 DEBUG   opendrift:2055: ======================================================================
17:13:06 INFO    opendrift:2056: 2025-02-10 11:41:25.118634 - step 86 of 96 - 500 active elements (0 deactivated)
17:13:06 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:06 DEBUG   opendrift:2064: ======================================================================
17:13:06 DEBUG   opendrift:2075:                57.55534979037368 <- latitude  -> 57.848434332793666
17:13:06 DEBUG   opendrift:2080:                9.632721854220723 <- longitude -> 10.636730503055912
17:13:06 DEBUG   opendrift:2085:                -50.43053570801444   <- z ->   0.0
17:13:06 DEBUG   opendrift:2086: ---------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 11:00:00 (before)
                2025-02-10 12:00:00 (after)
17:13:06 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 11:00:00) in space  (linearNDFast)
17:13:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:06 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 12:00:00) in space  (linearNDFast)
17:13:06 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:06 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 11:00:00, weight 0.31) and
                      after (2025-02-10 12:00:00, weight 0.69) in time
17:13:06 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3672892874286 and -59.36328050972916 degrees.
17:13:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3672892874286 and -59.36328050972916 degrees.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:06 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:06 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:06 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.06103 (min) -0.00826824 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.555212 (min) 0.298896 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.48594 (min) -0.291204 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.8155 (min) -7.23819 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.09488 (min) -1.80275 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.43973 (min) 77.4956 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.28016 (min) 7.17203 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5404 (min) 34.8931 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000714175 (min) 0.00164754 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:06 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:06 DEBUG   opendrift:694: No elements hit coastline.
17:13:06 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:06 DEBUG   opendrift:1695: No elements to deactivate
17:13:06 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:13:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 373.   0.]
 [  0.   0.   0.   0.   0.]
 [177.   0.   0. 569.   0.]
 [  0.   0. 938.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:06 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:06 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.09145417111322089
17:13:06 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:06 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:06 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:06 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:06 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:06 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
17:13:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
17:13:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [253, 0, 246, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:06 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:06 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:06 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:06 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:06 DEBUG   opendrift:2055: ======================================================================
17:13:06 INFO    opendrift:2056: 2025-02-10 12:11:25.118634 - step 87 of 96 - 500 active elements (0 deactivated)
17:13:06 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:06 DEBUG   opendrift:2064: ======================================================================
17:13:06 DEBUG   opendrift:2075:                57.54678367731974 <- latitude  -> 57.84763702282142
17:13:06 DEBUG   opendrift:2080:                9.627806005382162 <- longitude -> 10.635048372747352
17:13:06 DEBUG   opendrift:2085:                -49.218825894230186   <- z ->   0.0
17:13:06 DEBUG   opendrift:2086: ---------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:06 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:06 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:06 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 12:00:00 (before)
                2025-02-10 13:00:00 (after)
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:08 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:08 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 85x89x7) for time after (2025-02-10 13:00:00)
17:13:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 12:00:00) in space  (linearNDFast)
17:13:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 13:00:00) in space  (linearNDFast)
17:13:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 12:00:00, weight 0.81) and
                      after (2025-02-10 13:00:00, weight 0.19) in time
17:13:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.37220514206131 and -59.36496266951793 degrees.
17:13:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.37220514206131 and -59.36496266951793 degrees.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.04511 (min) -0.0188424 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.555082 (min) 0.265484 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.446883 (min) -0.244325 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.6159 (min) -7.21903 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.02289 (min) -1.54008 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.39785 (min) 76.2388 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27423 (min) 7.1743 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5312 (min) 34.8947 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000661861 (min) 0.00155351 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:08 DEBUG   opendrift:694: No elements hit coastline.
17:13:08 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:08 DEBUG   opendrift:1695: No elements to deactivate
17:13:08 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:13:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 374.   0.]
 [  0.   0.   0.   0.   0.]
 [181.   0.   0. 575.   0.]
 [  0.   0. 947.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:08 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:08 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08751917242236243
17:13:08 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:08 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:08 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 2 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 3 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 20 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
17:13:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
17:13:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [256, 0, 243, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:08 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:08 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:08 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:08 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:08 DEBUG   opendrift:2055: ======================================================================
17:13:08 INFO    opendrift:2056: 2025-02-10 12:41:25.118634 - step 88 of 96 - 500 active elements (0 deactivated)
17:13:08 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:08 DEBUG   opendrift:2064: ======================================================================
17:13:08 DEBUG   opendrift:2075:                57.53865551037481 <- latitude  -> 57.84678915644665
17:13:08 DEBUG   opendrift:2080:                9.62083899022251 <- longitude -> 10.634479267411393
17:13:08 DEBUG   opendrift:2085:                -47.94878826235073   <- z ->   0.0
17:13:08 DEBUG   opendrift:2086: ---------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 12:00:00 (before)
                2025-02-10 13:00:00 (after)
17:13:08 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 12:00:00) in space  (linearNDFast)
17:13:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:08 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 13:00:00) in space  (linearNDFast)
17:13:08 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:08 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 12:00:00, weight 0.31) and
                      after (2025-02-10 13:00:00, weight 0.69) in time
17:13:08 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.37917215087714 and -59.3655317669453 degrees.
17:13:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.37917215087714 and -59.3655317669453 degrees.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:08 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:08 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:08 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.01223 (min) 0.0127573 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.550524 (min) 0.228452 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.428269 (min) -0.200075 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.578 (min) -7.13769 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.15043 (min) -1.43021 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.32293 (min) 75.6445 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27697 (min) 7.17017 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.523 (min) 34.8948 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000697795 (min) 0.00165536 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:08 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:08 DEBUG   opendrift:694: No elements hit coastline.
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift:1695: No elements to deactivate
17:13:08 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:13:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 2 0]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 3]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 378.   0.]
 [  0.   0.   0.   0.   0.]
 [183.   0.   0. 586.   0.]
 [  0.   0. 959.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:08 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:08 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08440566180454732
17:13:08 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:08 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:08 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:08 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:08 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
17:13:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
17:13:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [254, 0, 245, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:08 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:08 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:08 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:08 DEBUG   opendrift:738: Lifting 1 elements to seafloor.
17:13:08 DEBUG   opendrift:2055: ======================================================================
17:13:08 INFO    opendrift:2056: 2025-02-10 13:11:25.118634 - step 89 of 96 - 500 active elements (0 deactivated)
17:13:08 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:08 DEBUG   opendrift:2064: ======================================================================
17:13:08 DEBUG   opendrift:2075:                57.53050957117353 <- latitude  -> 57.84734862631415
17:13:08 DEBUG   opendrift:2080:                9.612345553767549 <- longitude -> 10.634864584506115
17:13:08 DEBUG   opendrift:2085:                -48.80791982495138   <- z ->   0.0
17:13:08 DEBUG   opendrift:2086: ---------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:08 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:08 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:08 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 13:00:00 (before)
                2025-02-10 14:00:00 (after)
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:10 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:10 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 86x90x7) for time after (2025-02-10 14:00:00)
17:13:10 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 13:00:00) in space  (linearNDFast)
17:13:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:10 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 14:00:00) in space  (linearNDFast)
17:13:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:10 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 13:00:00, weight 0.81) and
                      after (2025-02-10 14:00:00, weight 0.19) in time
17:13:10 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3876655947049 and -59.36514644693612 degrees.
17:13:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.3876655947049 and -59.36514644693612 degrees.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.988065 (min) 0.0379864 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.552534 (min) 0.283861 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.421491 (min) -0.165613 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.4624 (min) -7.20542 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.20579 (min) -1.51819 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.28792 (min) 75.0853 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.27088 (min) 7.16767 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5163 (min) 34.8938 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000663632 (min) 0.00150769 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:10 DEBUG   opendrift:694: No elements hit coastline.
17:13:10 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:10 DEBUG   opendrift:1695: No elements to deactivate
17:13:10 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
17:13:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2 0 0 0 2]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0 3 3 3 0]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 384.   0.]
 [  0.   0.   0.   0.   0.]
 [186.   0.   0. 592.   0.]
 [  0.   0. 969.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:10 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:10 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08252279105988874
17:13:10 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:10 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:10 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
17:13:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
17:13:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [251, 0, 247, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:10 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:10 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:10 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:10 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:10 DEBUG   opendrift:2055: ======================================================================
17:13:10 INFO    opendrift:2056: 2025-02-10 13:41:25.118634 - step 90 of 96 - 500 active elements (0 deactivated)
17:13:10 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:10 DEBUG   opendrift:2064: ======================================================================
17:13:10 DEBUG   opendrift:2075:                57.522454244802 <- latitude  -> 57.84656359322208
17:13:10 DEBUG   opendrift:2080:                9.601378118298483 <- longitude -> 10.634864584506115
17:13:10 DEBUG   opendrift:2085:                -49.4538350039223   <- z ->   0.0
17:13:10 DEBUG   opendrift:2086: ---------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 13:00:00 (before)
                2025-02-10 14:00:00 (after)
17:13:10 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 13:00:00) in space  (linearNDFast)
17:13:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:10 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 14:00:00) in space  (linearNDFast)
17:13:10 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:10 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 13:00:00, weight 0.31) and
                      after (2025-02-10 14:00:00, weight 0.69) in time
17:13:10 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.398633025306054 and -59.36514644693612 degrees.
17:13:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.398633025306054 and -59.36514644693612 degrees.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:10 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:10 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:10 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.925922 (min) 0.0714124 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.562645 (min) 0.294554 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.43722 (min) -0.159937 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.511 (min) -7.07358 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.09982 (min) -1.85652 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.2396 (min) 74.6688 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.26973 (min) 7.17982 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5122 (min) 34.8931 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000503572 (min) 0.00123207 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:10 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:10 DEBUG   opendrift:694: No elements hit coastline.
17:13:10 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:10 DEBUG   opendrift:1695: No elements to deactivate
17:13:10 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
17:13:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 0 2 2]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 3 0 0]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 386.   0.]
 [  0.   0.   0.   0.   0.]
 [191.   0.   0. 600.   0.]
 [  0.   0. 982.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:10 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:10 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08247464973912162
17:13:10 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:10 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:10 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:10 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:10 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:10 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
17:13:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
17:13:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [254, 0, 244, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:10 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:10 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:10 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:10 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:10 DEBUG   opendrift:2055: ======================================================================
17:13:10 INFO    opendrift:2056: 2025-02-10 14:11:25.118634 - step 91 of 96 - 500 active elements (0 deactivated)
17:13:10 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:10 DEBUG   opendrift:2064: ======================================================================
17:13:10 DEBUG   opendrift:2075:                57.51376992097774 <- latitude  -> 57.845713583457815
17:13:10 DEBUG   opendrift:2080:                9.590132515538055 <- longitude -> 10.63486458450611
17:13:10 DEBUG   opendrift:2085:                -49.47416911888784   <- z ->   0.0
17:13:10 DEBUG   opendrift:2086: ---------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:10 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:10 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:10 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 14:00:00 (before)
                2025-02-10 15:00:00 (after)
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:12 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:12 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 88x92x7) for time after (2025-02-10 15:00:00)
17:13:12 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 14:00:00) in space  (linearNDFast)
17:13:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:12 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 15:00:00) in space  (linearNDFast)
17:13:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:12 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 14:00:00, weight 0.81) and
                      after (2025-02-10 15:00:00, weight 0.19) in time
17:13:12 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.409878657651646 and -59.36514644693612 degrees.
17:13:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.409878657651646 and -59.36514644693612 degrees.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:12 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.94829 (min) 0.106304 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.56233 (min) 0.324949 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.46017 (min) -0.168482 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.5003 (min) -7.25668 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.99828 (min) -1.77945 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.22503 (min) 73.0887 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.26412 (min) 7.1826 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5098 (min) 34.8922 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000447585 (min) 0.00111275 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:12 DEBUG   opendrift:694: No elements hit coastline.
17:13:12 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:12 DEBUG   opendrift:1695: No elements to deactivate
17:13:12 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
17:13:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 390.   0.]
 [  0.   0.   0.   0.   0.]
 [192.   0.   0. 607.   0.]
 [  0.   0. 991.   0.   0.]
 [  0.   0.   0.   0.   0.]]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:12 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:12 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08196562835248303
17:13:12 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:12 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:12 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
17:13:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
17:13:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [251, 0, 247, 2, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:12 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:12 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:12 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:12 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:12 DEBUG   opendrift:2055: ======================================================================
17:13:12 INFO    opendrift:2056: 2025-02-10 14:41:25.118634 - step 92 of 96 - 500 active elements (0 deactivated)
17:13:12 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:12 DEBUG   opendrift:2064: ======================================================================
17:13:12 DEBUG   opendrift:2075:                57.50549954892565 <- latitude  -> 57.84500706073057
17:13:12 DEBUG   opendrift:2080:                9.575659837369413 <- longitude -> 10.63486458450611
17:13:12 DEBUG   opendrift:2085:                -49.42598547280455   <- z ->   0.0
17:13:12 DEBUG   opendrift:2086: ---------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 14:00:00 (before)
                2025-02-10 15:00:00 (after)
17:13:12 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 14:00:00) in space  (linearNDFast)
17:13:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:12 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 15:00:00) in space  (linearNDFast)
17:13:12 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:12 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 14:00:00, weight 0.31) and
                      after (2025-02-10 15:00:00, weight 0.69) in time
17:13:12 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.42435133539256 and -59.36514644693612 degrees.
17:13:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.42435133539256 and -59.36514644693612 degrees.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:12 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:12 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:12 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:12 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.06831 (min) 0.144915 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.563024 (min) 0.219641 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.493674 (min) -0.199636 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.3913 (min) -7.27551 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.25405 (min) -1.93502 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.20971 (min) 72.532 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.2478 (min) 7.17592 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.51 (min) 34.8905 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00042613 (min) 0.00102902 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:12 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:12 DEBUG   opendrift:694: No elements hit coastline.
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift:1695: No elements to deactivate
17:13:12 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
17:13:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0 0 2 0 0 0]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 3 0 3 3 3]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  397.    0.]
 [   0.    0.    0.    0.    0.]
 [ 195.    0.    0.  617.    0.]
 [   0.    0. 1005.    0.    0.]
 [   0.    0.    0.    0.    0.]]
17:13:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:12 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:12 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.08073693023104413
17:13:12 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:12 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:12 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:12 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 5 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:12 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:12 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
17:13:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
17:13:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [247, 0, 252, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:12 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:12 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:12 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:12 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:12 DEBUG   opendrift:2055: ======================================================================
17:13:12 INFO    opendrift:2056: 2025-02-10 15:11:25.118634 - step 93 of 96 - 500 active elements (0 deactivated)
17:13:12 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:12 DEBUG   opendrift:2064: ======================================================================
17:13:12 DEBUG   opendrift:2075:                57.49727371455448 <- latitude  -> 57.84440521917446
17:13:12 DEBUG   opendrift:2080:                9.561449851024802 <- longitude -> 10.639241794352538
17:13:12 DEBUG   opendrift:2085:                -48.70669924585348   <- z ->   0.0
17:13:12 DEBUG   opendrift:2086: ---------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:12 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:12 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:12 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 15:00:00 (before)
                2025-02-10 16:00:00 (after)
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:14 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:14 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 88x93x7) for time after (2025-02-10 16:00:00)
17:13:14 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 15:00:00) in space  (linearNDFast)
17:13:14 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 16:00:00) in space  (linearNDFast)
17:13:14 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:14 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 15:00:00, weight 0.81) and
                      after (2025-02-10 16:00:00, weight 0.19) in time
17:13:14 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.438561328097116 and -59.360769244052634 degrees.
17:13:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.438561328097116 and -59.360769244052634 degrees.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:14 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.02936 (min) 0.211092 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.55794 (min) 0.222496 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.527512 (min) -0.235863 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.2869 (min) -7.27075 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.42217 (min) -2.01094 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.14502 (min) 72.6377 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.24717 (min) 7.19685 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5112 (min) 34.8977 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000434691 (min) 0.00113327 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:14 DEBUG   opendrift:694: No elements hit coastline.
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift:1695: No elements to deactivate
17:13:14 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
17:13:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  402.    0.]
 [   0.    0.    0.    0.    0.]
 [ 196.    0.    0.  624.    0.]
 [   0.    0. 1020.    0.    0.]
 [   0.    0.    0.    0.    0.]]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:14 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:14 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07939436778888206
17:13:14 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:14 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:14 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:14 DEBUG   opendrift.models.oceandrift:517: 22 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 21 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 16 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 16 elements to seafloor.
17:13:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
17:13:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
17:13:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [243, 0, 256, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:14 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:14 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:14 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:14 DEBUG   opendrift:738: Lifting 3 elements to seafloor.
17:13:14 DEBUG   opendrift:2055: ======================================================================
17:13:14 INFO    opendrift:2056: 2025-02-10 15:41:25.118634 - step 94 of 96 - 500 active elements (0 deactivated)
17:13:14 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:14 DEBUG   opendrift:2064: ======================================================================
17:13:14 DEBUG   opendrift:2075:                57.48924805112808 <- latitude  -> 57.84368147606305
17:13:14 DEBUG   opendrift:2080:                9.547427784915666 <- longitude -> 10.645618383695364
17:13:14 DEBUG   opendrift:2085:                -48.029819927681444   <- z ->   0.0
17:13:14 DEBUG   opendrift:2086: ---------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 15:00:00 (before)
                2025-02-10 16:00:00 (after)
17:13:14 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 15:00:00) in space  (linearNDFast)
17:13:14 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:14 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 16:00:00) in space  (linearNDFast)
17:13:14 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:14 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 15:00:00, weight 0.31) and
                      after (2025-02-10 16:00:00, weight 0.69) in time
17:13:14 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.4525833907323 and -59.35439264585641 degrees.
17:13:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.4525833907323 and -59.35439264585641 degrees.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:14 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:14 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:14 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:14 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.88977 (min) 0.361365 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.565766 (min) 0.408837 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.560225 (min) -0.281044 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.1584 (min) -7.25 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.36921 (min) -1.99599 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.1563 (min) 72.2313 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.2377 (min) 7.20011 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4866 (min) 34.8998 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000454353 (min) 0.00108745 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:14 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:14 DEBUG   opendrift:694: No elements hit coastline.
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift:1695: No elements to deactivate
17:13:14 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:13:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 0 0 2]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 3 3 0]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  406.    0.]
 [   0.    0.    0.    0.    0.]
 [ 200.    0.    0.  634.    0.]
 [   0.    0. 1035.    0.    0.]
 [   0.    0.    0.    0.    0.]]
17:13:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:14 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:14 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07745289144692705
17:13:14 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:14 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:14 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 5 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 5 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:14 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:14 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
17:13:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
17:13:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [243, 0, 256, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:14 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:14 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:14 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:14 DEBUG   opendrift:738: Lifting 2 elements to seafloor.
17:13:14 DEBUG   opendrift:2055: ======================================================================
17:13:14 INFO    opendrift:2056: 2025-02-10 16:11:25.118634 - step 95 of 96 - 500 active elements (0 deactivated)
17:13:14 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:14 DEBUG   opendrift:2064: ======================================================================
17:13:14 DEBUG   opendrift:2075:                57.48134255730572 <- latitude  -> 57.84312911317752
17:13:14 DEBUG   opendrift:2080:                9.533835714227699 <- longitude -> 10.656536367801554
17:13:14 DEBUG   opendrift:2085:                -47.47266369618139   <- z ->   0.0
17:13:14 DEBUG   opendrift:2086: ---------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:14 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:14 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:14 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 16:00:00 (before)
                2025-02-10 17:00:00 (after)
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
17:13:16 DEBUG   opendrift.readers.interpolation.structured:70: Filled NaN-values toward seafloor for :['sea_water_salinity', 'y_sea_water_velocity', 'sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity']
17:13:16 DEBUG   opendrift.readers.basereader.structured:315: Fetched env-block (size 92x94x7) for time after (2025-02-10 17:00:00)
17:13:16 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 16:00:00) in space  (linearNDFast)
17:13:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 17:00:00) in space  (linearNDFast)
17:13:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.interpolation.interpolators:131: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
17:13:16 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 16:00:00, weight 0.81) and
                      after (2025-02-10 17:00:00, weight 0.19) in time
17:13:16 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.46617546730832 and -59.34347465288289 degrees.
17:13:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.46617546730832 and -59.34347465288289 degrees.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:16 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -1.07456 (min) 0.0468834 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.564055 (min) 0.87332 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.595489 (min) -0.325584 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.0932 (min) -7.04428 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -3.16215 (min) -1.9251 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.16672 (min) 72.7 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.22718 (min) 7.19918 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.5136 (min) 34.8979 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.000536329 (min) 0.00106817 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:16 DEBUG   opendrift:694: No elements hit coastline.
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift:1695: No elements to deactivate
17:13:16 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
17:13:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  409.    0.]
 [   0.    0.    0.    0.    0.]
 [ 201.    0.    0.  640.    0.]
 [   0.    0. 1045.    0.    0.]
 [   0.    0.    0.    0.    0.]]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:16 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:16 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.07636194472279614
17:13:16 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:16 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:16 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:16 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 4 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 16 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 6 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 6 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 19 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 18 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
17:13:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
17:13:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [241, 0, 258, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:16 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:16 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:16 DEBUG   opendrift:874: to be seeded: 0, already seeded 500
17:13:16 DEBUG   opendrift:738: Lifting 4 elements to seafloor.
17:13:16 DEBUG   opendrift:2055: ======================================================================
17:13:16 INFO    opendrift:2056: 2025-02-10 16:41:25.118634 - step 96 of 96 - 500 active elements (0 deactivated)
17:13:16 DEBUG   opendrift:2062: 0 elements scheduled.
17:13:16 DEBUG   opendrift:2064: ======================================================================
17:13:16 DEBUG   opendrift:2075:                57.473695831693185 <- latitude  -> 57.842672168129596
17:13:16 DEBUG   opendrift:2080:                9.520596942783174 <- longitude -> 10.657953417204386
17:13:16 DEBUG   opendrift:2085:                -47.23984367136383   <- z ->   0.0
17:13:16 DEBUG   opendrift:2086: ---------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity', 'sea_surface_height']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2025-02-10 16:00:00 (before)
                2025-02-10 17:00:00 (after)
17:13:16 DEBUG   opendrift.readers.basereader.structured:336: Interpolating before (2025-02-10 16:00:00) in space  (linearNDFast)
17:13:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:16 DEBUG   opendrift.readers.basereader.structured:342: Interpolating after (2025-02-10 17:00:00) in space  (linearNDFast)
17:13:16 DEBUG   opendrift.readers.interpolation.structured:97: Initialising interpolator.
17:13:16 DEBUG   opendrift.readers.basereader.structured:357: Interpolating before (2025-02-10 16:00:00, weight 0.31) and
                      after (2025-02-10 17:00:00, weight 0.69) in time
17:13:16 DEBUG   opendrift.readers.basereader.structured:370: Interpolating profiles in time
17:13:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.47941424114896 and -59.34205760220087 degrees.
17:13:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.47941424114896 and -59.34205760220087 degrees.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['ocean_mixed_layer_thickness']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader constant_reader
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:16 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 10 for sea_water_temperature for 0 profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:802:       Using fallback value 34 for sea_water_salinity for 0 profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:791:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
17:13:16 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     x_sea_water_velocity: -0.891983 (min) 0.00685448 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     y_sea_water_velocity: -0.550015 (min) 0.556246 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_surface_height: -0.632502 (min) -0.36907 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     x_wind: -10.1398 (min) -6.72775 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     y_wind: -2.94483 (min) -1.74343 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_floor_depth_below_sea_level: 7.17673 (min) 72.979 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_temperature: 4.21436 (min) 7.19617 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_salinity: 28.4141 (min) 34.8962 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     upward_sea_water_velocity: -0.00051789 (min) 0.00117246 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     spm: 1 (min) 1 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     doc: 0 (min) 0 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     pH_sediment: 6.9 (min) 6.9 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:16 DEBUG   opendrift:694: No elements hit coastline.
17:13:16 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:16 DEBUG   opendrift:1695: No elements to deactivate
17:13:16 DEBUG   opendrift:2129: Calling ChemicalDrift.update()
17:13:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
17:13:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
17:13:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
17:13:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 2]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 0]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  415.    0.]
 [   0.    0.    0.    0.    0.]
 [ 203.    0.    0.  647.    0.]
 [   0.    0. 1055.    0.    0.]
 [   0.    0.    0.    0.    0.]]
17:13:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
17:13:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
17:13:16 DEBUG   opendrift.models.oceandrift:429: Using functional expression for diffusivity
17:13:16 DEBUG   opendrift.models.oceandrift:434: Diffusivities are in range 0.0 to 0.0767653136332484
17:13:16 DEBUG   opendrift.models.oceandrift:453: TSprofiles deactivated for vertical mixing
17:13:16 DEBUG   opendrift.models.oceandrift:467: Vertical mixing module:windspeed_Large1994
17:13:16 DEBUG   opendrift.models.oceandrift:470: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
17:13:16 DEBUG   opendrift.models.oceandrift:517: 23 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 7 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 7 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 8 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 8 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 4 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 9 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 9 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 9 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 10 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 10 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 11 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 11 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 6 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 12 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 12 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 13 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 13 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 11 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 8 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 14 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 14 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 17 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 10 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 15 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 15 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 17 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 17 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 14 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 13 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 18 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 18 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 15 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 19 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 19 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 20 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 20 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 7 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 21 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 21 elements to seafloor.
17:13:16 DEBUG   opendrift.models.oceandrift:517: 12 elements penetrated seafloor, lifting up
17:13:16 DEBUG   opendrift.models.oceandrift:535: 23 elements reached seafloor, interacting with bottom
17:13:16 DEBUG   opendrift:738: Lifting 23 elements to seafloor.
17:13:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 22
17:13:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
17:13:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 22 elements
17:13:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
17:13:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [237, 0, 262, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
17:13:16 DEBUG   opendrift:1646: Horizontal diffusivity is 0, no random walk.
17:13:16 DEBUG   opendrift:2144: 500 active elements (0 deactivated)
17:13:16 DEBUG   opendrift:2173: Cleaning up
17:13:16 DEBUG   opendrift.models.basemodel.environment:595: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:596: Variable group ['land_binary_mask']
17:13:16 DEBUG   opendrift.models.basemodel.environment:597: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:601: Calling reader global_landmask
17:13:16 DEBUG   opendrift.models.basemodel.environment:602: ----------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:618: Data needed for 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
17:13:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
17:13:16 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
17:13:16 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
17:13:16 DEBUG   opendrift.models.basemodel.environment:752: Obtained data for all elements.
17:13:16 DEBUG   opendrift.models.basemodel.environment:765: ---------------------------------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:766: Finished processing all variable groups
17:13:16 DEBUG   opendrift.models.basemodel.environment:891: ------------ SUMMARY -------------
17:13:16 DEBUG   opendrift.models.basemodel.environment:893:     land_binary_mask: 0 (min) 0 (max)
17:13:16 DEBUG   opendrift.models.basemodel.environment:895: ---------------------------------
17:13:16 DEBUG   opendrift:694: No elements hit coastline.
17:13:16 DEBUG   opendrift:2256: Updating minval and maxval
17:13:16 DEBUG   opendrift:2336: Writing to file
17:13:16 DEBUG   opendrift:1695: No elements to deactivate
17:13:16 DEBUG   opendrift:100: Changed mode from Mode.Run to Mode.Result

<xarray.Dataset> Size: 7MB
Dimensions:                               (trajectory: 500, time: 97)
Coordinates:
  * trajectory                            (trajectory) int64 4kB 0 1 ... 498 499
  * time                                  (time) datetime64[ns] 776B 2025-02-...
Data variables: (12/35)
    status                                (trajectory, time) float32 194kB 0....
    moving                                (trajectory, time) float32 194kB 1....
    age_seconds                           (trajectory, time) float32 194kB 0....
    origin_marker                         (trajectory, time) float32 194kB 0....
    lon                                   (trajectory, time) float32 194kB 10...
    lat                                   (trajectory, time) float32 194kB 57...
    ...                                    ...
    spm                                   (trajectory, time) float32 194kB 1....
    ocean_mixed_layer_thickness           (trajectory, time) float32 194kB 40...
    active_sediment_layer_thickness       (trajectory, time) float32 194kB 0....
    doc                                   (trajectory, time) float32 194kB 0....
    sea_water_ph_reported_on_total_scale  (trajectory, time) float32 194kB 8....
    pH_sediment                           (trajectory, time) float32 194kB 6....
Attributes: (12/208)
    Conventions:                                                       CF-1.1...
    standard_name_vocabulary:                                          CF Sta...
    featureType:                                                       trajec...
    title:                                                             OpenDr...
    summary:                                                           Output...
    keywords:                                                          trajec...
    ...                                                                ...
    geospatial_lon_units:                                              degree...
    geospatial_lon_resolution:                                         point
    runtime:                                                           0:01:5...
    geospatial_vertical_min:                                           -52.45...
    geospatial_vertical_max:                                           0.0
    geospatial_vertical_positive:                                      up

xarray.Dataset

• Dimensions:
  • trajectory: 500
  • time: 97
• Coordinates: (2)
  • trajectory
    (trajectory)
    int64
    0 1 2 3 4 5 ... 495 496 497 498 499

    cf_role :

    trajectory_id

    dtype :

    <class 'numpy.int32'>

    array([  0,   1,   2, ..., 497, 498, 499])

  • time
    (time)
    datetime64[ns]
    2025-02-08T17:11:25.118634 ... 2...

    standard_name :

    time

    long_name :

    time

    dtype :

    <class 'numpy.float64'>

    array(['2025-02-08T17:11:25.118634000', '2025-02-08T17:41:25.118634000',
           '2025-02-08T18:11:25.118634000', '2025-02-08T18:41:25.118634000',
           '2025-02-08T19:11:25.118634000', '2025-02-08T19:41:25.118634000',
           '2025-02-08T20:11:25.118634000', '2025-02-08T20:41:25.118634000',
           '2025-02-08T21:11:25.118634000', '2025-02-08T21:41:25.118634000',
           '2025-02-08T22:11:25.118634000', '2025-02-08T22:41:25.118634000',
           '2025-02-08T23:11:25.118634000', '2025-02-08T23:41:25.118634000',
           '2025-02-09T00:11:25.118634000', '2025-02-09T00:41:25.118634000',
           '2025-02-09T01:11:25.118634000', '2025-02-09T01:41:25.118634000',
           '2025-02-09T02:11:25.118634000', '2025-02-09T02:41:25.118634000',
           '2025-02-09T03:11:25.118634000', '2025-02-09T03:41:25.118634000',
           '2025-02-09T04:11:25.118634000', '2025-02-09T04:41:25.118634000',
           '2025-02-09T05:11:25.118634000', '2025-02-09T05:41:25.118634000',
           '2025-02-09T06:11:25.118634000', '2025-02-09T06:41:25.118634000',
           '2025-02-09T07:11:25.118634000', '2025-02-09T07:41:25.118634000',
           '2025-02-09T08:11:25.118634000', '2025-02-09T08:41:25.118634000',
           '2025-02-09T09:11:25.118634000', '2025-02-09T09:41:25.118634000',
           '2025-02-09T10:11:25.118634000', '2025-02-09T10:41:25.118634000',
           '2025-02-09T11:11:25.118634000', '2025-02-09T11:41:25.118634000',
           '2025-02-09T12:11:25.118634000', '2025-02-09T12:41:25.118634000',
           '2025-02-09T13:11:25.118634000', '2025-02-09T13:41:25.118634000',
           '2025-02-09T14:11:25.118634000', '2025-02-09T14:41:25.118634000',
           '2025-02-09T15:11:25.118634000', '2025-02-09T15:41:25.118634000',
           '2025-02-09T16:11:25.118634000', '2025-02-09T16:41:25.118634000',
           '2025-02-09T17:11:25.118634000', '2025-02-09T17:41:25.118634000',
           '2025-02-09T18:11:25.118634000', '2025-02-09T18:41:25.118634000',
           '2025-02-09T19:11:25.118634000', '2025-02-09T19:41:25.118634000',
           '2025-02-09T20:11:25.118634000', '2025-02-09T20:41:25.118634000',
           '2025-02-09T21:11:25.118634000', '2025-02-09T21:41:25.118634000',
           '2025-02-09T22:11:25.118634000', '2025-02-09T22:41:25.118634000',
           '2025-02-09T23:11:25.118634000', '2025-02-09T23:41:25.118634000',
           '2025-02-10T00:11:25.118634000', '2025-02-10T00:41:25.118634000',
           '2025-02-10T01:11:25.118634000', '2025-02-10T01:41:25.118634000',
           '2025-02-10T02:11:25.118634000', '2025-02-10T02:41:25.118634000',
           '2025-02-10T03:11:25.118634000', '2025-02-10T03:41:25.118634000',
           '2025-02-10T04:11:25.118634000', '2025-02-10T04:41:25.118634000',
           '2025-02-10T05:11:25.118634000', '2025-02-10T05:41:25.118634000',
           '2025-02-10T06:11:25.118634000', '2025-02-10T06:41:25.118634000',
           '2025-02-10T07:11:25.118634000', '2025-02-10T07:41:25.118634000',
           '2025-02-10T08:11:25.118634000', '2025-02-10T08:41:25.118634000',
           '2025-02-10T09:11:25.118634000', '2025-02-10T09:41:25.118634000',
           '2025-02-10T10:11:25.118634000', '2025-02-10T10:41:25.118634000',
           '2025-02-10T11:11:25.118634000', '2025-02-10T11:41:25.118634000',
           '2025-02-10T12:11:25.118634000', '2025-02-10T12:41:25.118634000',
           '2025-02-10T13:11:25.118634000', '2025-02-10T13:41:25.118634000',
           '2025-02-10T14:11:25.118634000', '2025-02-10T14:41:25.118634000',
           '2025-02-10T15:11:25.118634000', '2025-02-10T15:41:25.118634000',
           '2025-02-10T16:11:25.118634000', '2025-02-10T16:41:25.118634000',
           '2025-02-10T17:11:25.118634000'], dtype='datetime64[ns]')

• Data variables: (35)
  • status
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    dtype :

    <class 'numpy.int32'>

    valid_range :

    [0 0]

    flag_values :

    [0]

    flag_meanings :

    active

    array([[0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           ...,
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.]], dtype=float32)

  • moving
    (trajectory, time)
    float32
    1.0 1.0 1.0 1.0 ... 1.0 1.0 1.0 1.0

    dtype :

    <class 'numpy.int32'>

    minval :

    0

    maxval :

    1

    array([[1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           ...,
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.]], dtype=float32)

  • age_seconds
    (trajectory, time)
    float32
    0.0 1.8e+03 ... 1.71e+05 1.728e+05

    dtype :

    <class 'numpy.float32'>

    units :

    s

    minval :

    0.0

    maxval :

    172800.0

    array([[     0.,   1800.,   3600., ..., 169200., 171000., 172800.],
           [     0.,   1800.,   3600., ..., 169200., 171000., 172800.],
           [     0.,   1800.,   3600., ..., 169200., 171000., 172800.],
           ...,
           [     0.,   1800.,   3600., ..., 169200., 171000., 172800.],
           [     0.,   1800.,   3600., ..., 169200., 171000., 172800.],
           [     0.,   1800.,   3600., ..., 169200., 171000., 172800.]],
          dtype=float32)

  • origin_marker
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    dtype :

    <class 'numpy.int32'>

    unit :

    description :

    An integer kept constant during the simulation. Different values may be used for different seedings, to separate elements during analysis. With GUI, only a single seeding is possible.

    flag_values :

    [0]

    flag_meanings :

    Seed_0

    minval :

    0

    maxval :

    0

    array([[0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           ...,
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.]], dtype=float32)

  • lon
    (trajectory, time)
    float32
    10.66 10.66 10.66 ... 9.662 9.648

    dtype :

    <class 'numpy.float32'>

    units :

    degrees_east

    standard_name :

    longitude

    long_name :

    longitude

    axis :

    X

    minval :

    9.507622

    maxval :

    10.759372

    array([[10.656246 , 10.655573 , 10.657612 , ...,  9.970412 ,  9.959441 ,
             9.949122 ],
           [10.571482 , 10.574257 , 10.576254 , ...,  9.789401 ,  9.771666 ,
             9.750957 ],
           [10.600767 , 10.600736 , 10.601601 , ...,  9.807794 ,  9.790857 ,
             9.773514 ],
           ...,
           [10.57384  , 10.574788 , 10.577131 , ...,  9.972334 ,  9.949025 ,
             9.92917  ],
           [10.620895 , 10.6186695, 10.619514 , ...,  9.762022 ,  9.745125 ,
             9.730298 ],
           [10.57275  , 10.577208 , 10.582117 , ...,  9.676391 ,  9.661943 ,
             9.648153 ]], dtype=float32)

  • lat
    (trajectory, time)
    float32
    57.59 57.6 57.6 ... 57.56 57.55

    dtype :

    <class 'numpy.float32'>

    units :

    degrees_north

    standard_name :

    latitude

    long_name :

    latitude

    axis :

    Y

    minval :

    57.466686

    maxval :

    57.849186

    array([[57.59062 , 57.597233, 57.601734, ..., 57.798073, 57.79684 ,
            57.795567],
           [57.598682, 57.6033  , 57.608776, ..., 57.679092, 57.67429 ,
            57.67003 ],
           [57.576702, 57.581856, 57.58535 , ..., 57.747997, 57.748116,
            57.748524],
           ...,
           [57.586308, 57.59133 , 57.595253, ..., 57.705193, 57.704983,
            57.702282],
           [57.574013, 57.581474, 57.585854, ..., 57.63515 , 57.627975,
            57.621315],
           [57.647057, 57.65175 , 57.65641 , ..., 57.568108, 57.56019 ,
            57.55266 ]], dtype=float32)

  • z
    (trajectory, time)
    float32
    -5.488 -13.07 ... -21.37 -10.36

    dtype :

    <class 'numpy.float32'>

    units :

    m

    standard_name :

    z

    long_name :

    vertical position

    axis :

    Z

    positive :

    up

    minval :

    -52.458706

    maxval :

    0.0

    array([[ -5.488135 , -13.070648 , -12.252383 , ..., -29.254488 ,
            -37.022663 , -10.8124485],
           [ -7.1518936,  -2.7567742,  -2.1220372, ..., -18.369095 ,
             -0.9949428, -10.405024 ],
           [ -6.0276337, -12.689547 ,  -5.8516145, ...,  -3.6681013,
             -1.5417168,  -3.8610976],
           ...,
           [ -4.017135 , -11.77867  ,  -4.8708324, ...,  -2.848581 ,
            -16.882742 , -16.578068 ],
           [ -2.4841347,  -9.044224 ,  -9.943034 , ...,  -9.788784 ,
            -29.458626 , -17.042833 ],
           [ -5.058664 ,  -7.4452825,  -1.699682 , ..., -11.246706 ,
            -21.368622 , -10.35694  ]], dtype=float32)

  • wind_drift_factor
    (trajectory, time)
    float32
    0.02 0.02 0.02 ... 0.02 0.02 0.02

    dtype :

    <class 'numpy.float32'>

    units :

    1

    description :

    Elements at surface are moved with this fraction of the vind vector, in addition to currents and Stokes drift

    minval :

    0.02

    maxval :

    0.02

    array([[0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02],
           [0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02],
           [0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02],
           ...,
           [0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02],
           [0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02],
           [0.02, 0.02, 0.02, ..., 0.02, 0.02, 0.02]], dtype=float32)

  • current_drift_factor
    (trajectory, time)
    float32
    1.0 1.0 1.0 1.0 ... 1.0 1.0 1.0 1.0

    dtype :

    <class 'numpy.float32'>

    units :

    1

    description :

    Elements are moved with this fraction of the current vector, in addition to currents and Stokes drift

    minval :

    1.0

    maxval :

    1.0

    array([[1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           ...,
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.]], dtype=float32)

  • terminal_velocity
    (trajectory, time)
    float32
    0.0 -0.0 -0.0 ... -0.0 -0.0 -0.0

    dtype :

    <class 'numpy.float32'>

    units :

    m/s

    description :

    Terminal rise/sinking velocity (buoyancy) in the ocean column

    minval :

    -0.0010723657

    maxval :

    -0.0

    array([[ 0.        , -0.        , -0.        , ..., -0.        ,
            -0.        , -0.        ],
           [ 0.        , -0.        , -0.        , ..., -0.00063632,
            -0.00063668, -0.00063744],
           [ 0.        , -0.        , -0.        , ..., -0.00020822,
            -0.00020882, -0.00020888],
           ...,
           [ 0.        , -0.00038498, -0.00038336, ..., -0.00039517,
            -0.00039512, -0.00039371],
           [ 0.        , -0.        , -0.        , ..., -0.        ,
            -0.        , -0.        ],
           [ 0.        , -0.        , -0.        , ..., -0.        ,
            -0.        , -0.        ]], dtype=float32)

  • diameter
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    dtype :

    <class 'numpy.float32'>

    units :

    m

    minval :

    0.0

    maxval :

    4.489315e-05

    array([[0.0000000e+00, 0.0000000e+00, 0.0000000e+00, ..., 0.0000000e+00,
            0.0000000e+00, 0.0000000e+00],
           [0.0000000e+00, 0.0000000e+00, 0.0000000e+00, ..., 3.4787929e-05,
            3.4787929e-05, 3.4787929e-05],
           [0.0000000e+00, 0.0000000e+00, 0.0000000e+00, ..., 1.9826746e-05,
            1.9826746e-05, 1.9826746e-05],
           ...,
           [2.6661437e-05, 2.6661437e-05, 2.6661437e-05, ..., 2.7374997e-05,
            2.7374997e-05, 2.7374997e-05],
           [0.0000000e+00, 0.0000000e+00, 0.0000000e+00, ..., 0.0000000e+00,
            0.0000000e+00, 0.0000000e+00],
           [0.0000000e+00, 0.0000000e+00, 0.0000000e+00, ..., 0.0000000e+00,
            0.0000000e+00, 0.0000000e+00]], dtype=float32)

  • density
    (trajectory, time)
    float32
    2.65e+03 2.65e+03 ... 2.65e+03

    dtype :

    <class 'numpy.float32'>

    units :

    kg/m^3

    minval :

    2650.0

    maxval :

    2650.0

    array([[2650., 2650., 2650., ..., 2650., 2650., 2650.],
           [2650., 2650., 2650., ..., 2650., 2650., 2650.],
           [2650., 2650., 2650., ..., 2650., 2650., 2650.],
           ...,
           [2650., 2650., 2650., ..., 2650., 2650., 2650.],
           [2650., 2650., 2650., ..., 2650., 2650., 2650.],
           [2650., 2650., 2650., ..., 2650., 2650., 2650.]], dtype=float32)

  • specie
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    dtype :

    <class 'numpy.int32'>

    units :

    minval :

    0

    maxval :

    3

    array([[0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 2., 2., 2.],
           [0., 0., 0., ..., 2., 2., 2.],
           ...,
           [2., 2., 2., ..., 2., 2., 2.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.]], dtype=float32)

  • mass
    (trajectory, time)
    float32
    2e+03 1.972e+03 ... 706.7 695.5

    dtype :

    <class 'numpy.float32'>

    units :

    ug

    minval :

    459.41644

    maxval :

    2000.0

    array([[2000.     , 1972.0853 , 1943.1163 , ...,  650.5636 ,  640.4247 ,
             630.4322 ],
           [2000.     , 1971.7944 , 1944.4174 , ..., 1404.8429 , 1404.8429 ,
            1404.8429 ],
           [2000.     , 1971.6044 , 1942.5624 , ..., 1386.2415 , 1386.2415 ,
            1386.2415 ],
           ...,
           [2000.     , 2000.     , 2000.     , ..., 1899.7543 , 1899.7543 ,
            1899.7543 ],
           [2000.     , 1972.3633 , 1943.9457 , ...,  486.77402,  479.03595,
             471.42203],
           [2000.     , 1972.4556 , 1945.2812 , ...,  717.948  ,  706.65564,
             695.5495 ]], dtype=float32)

  • mass_degraded
    (trajectory, time)
    float32
    0.0 27.67 ... 1.28e+03 1.291e+03

    dtype :

    <class 'numpy.float32'>

    units :

    ug

    minval :

    0.0

    maxval :

    1526.2675

    array([[   0.      ,   27.66943 ,   56.391895, ..., 1336.3054  ,
            1346.327   , 1356.2003  ],
           [   0.      ,   27.954697,   55.094288, ...,  591.30676 ,
             591.30676 ,  591.30676 ],
           [   0.      ,   28.146505,   56.941757, ...,  609.7896  ,
             609.7896  ,  609.7896  ],
           ...,
           [   0.      ,    0.      ,    0.      , ...,  100.245674,
             100.245674,  100.245674],
           [   0.      ,   27.393936,   55.570026, ..., 1499.3004  ,
            1506.9524  , 1514.4811  ],
           [   0.      ,   27.298212,   54.237633, ..., 1268.9525  ,
            1280.1248  , 1291.115   ]], dtype=float32)

  • mass_degraded_water
    (trajectory, time)
    float32
    0.0 27.67 ... 1.166e+03 1.177e+03

    dtype :

    <class 'numpy.float32'>

    units :

    ug

    minval :

    0.0

    maxval :

    1526.2675

    array([[   0.      ,   27.66943 ,   56.391895, ..., 1300.9017  ,
            1310.9235  , 1320.7968  ],
           [   0.      ,   27.954697,   55.094288, ...,  591.30676 ,
             591.30676 ,  591.30676 ],
           [   0.      ,   28.146505,   56.941757, ...,  609.7896  ,
             609.7896  ,  609.7896  ],
           ...,
           [   0.      ,    0.      ,    0.      , ...,    0.      ,
               0.      ,    0.      ],
           [   0.      ,   27.393936,   55.570026, ..., 1499.3004  ,
            1506.9524  , 1514.4811  ],
           [   0.      ,   27.298212,   54.237633, ..., 1154.4926  ,
            1165.6649  , 1176.6552  ]], dtype=float32)

  • mass_degraded_sediment
    (trajectory, time)
    float32
    0.0 0.0 0.0 ... 114.5 114.5 114.5

    dtype :

    <class 'numpy.float32'>

    units :

    ug

    minval :

    0.0

    maxval :

    782.5368

    array([[  0.      ,   0.      ,   0.      , ...,  35.403606,  35.403606,
             35.403606],
           [  0.      ,   0.      ,   0.      , ...,   0.      ,   0.      ,
              0.      ],
           [  0.      ,   0.      ,   0.      , ...,   0.      ,   0.      ,
              0.      ],
           ...,
           [  0.      ,   0.      ,   0.      , ..., 100.245674, 100.245674,
            100.245674],
           [  0.      ,   0.      ,   0.      , ...,   0.      ,   0.      ,
              0.      ],
           [  0.      ,   0.      ,   0.      , ..., 114.459885, 114.459885,
            114.459885]], dtype=float32)

  • mass_volatilized
    (trajectory, time)
    float32
    0.0 0.2452 0.4917 ... 13.22 13.34

    dtype :

    <class 'numpy.float32'>

    units :

    ug

    minval :

    0.0

    maxval :

    14.721319

    array([[ 0.        ,  0.24523029,  0.4917239 , ..., 13.131022  ,
            13.248271  , 13.367487  ],
           [ 0.        ,  0.25083688,  0.48833743, ...,  3.8502753 ,
             3.8502753 ,  3.8502753 ],
           [ 0.        ,  0.24916705,  0.49582198, ...,  3.9688697 ,
             3.9688697 ,  3.9688697 ],
           ...,
           [ 0.        ,  0.        ,  0.        , ...,  0.        ,
             0.        ,  0.        ],
           [ 0.        ,  0.24279544,  0.48429474, ..., 13.925603  ,
            14.011647  , 14.096831  ],
           [ 0.        ,  0.2462171 ,  0.48115572, ..., 13.09951   ,
            13.219572  , 13.335466  ]], dtype=float32)

  • x_sea_water_velocity
    (trajectory, time)
    float32
    -0.02237 0.06771 ... -0.4587

    minval :

    -1.0958517

    maxval :

    0.50721055

    array([[-0.02237077,  0.0677148 ,  0.07488878, ..., -0.36245698,
            -0.34090558, -0.34090558],
           [ 0.09218152,  0.06631717,  0.07350282, ..., -0.58792645,
            -0.6865648 , -0.6865648 ],
           [-0.00104015,  0.028737  ,  0.01014591, ..., -0.5603162 ,
            -0.57374793, -0.57374793],
           ...,
           [ 0.03150124,  0.07783114,  0.05291455, ..., -0.7720045 ,
            -0.6576973 , -0.6576973 ],
           [-0.07398579,  0.02809631,  0.04557601, ..., -0.56083083,
            -0.49221689, -0.49221689],
           [ 0.14786018,  0.16282207,  0.13870679, ..., -0.48041484,
            -0.4586707 , -0.4586707 ]], dtype=float32)

  • y_sea_water_velocity
    (trajectory, time)
    float32
    0.4092 0.2786 ... -0.4657 -0.4657

    minval :

    -0.5657662

    maxval :

    0.8733196

    array([[ 0.40923348,  0.27855343,  0.28519103, ..., -0.07637586,
            -0.078817  , -0.078817  ],
           [ 0.28570288,  0.338936  ,  0.34747493, ..., -0.2970662 ,
            -0.26347524, -0.26347524],
           [ 0.3188188 ,  0.21636511,  0.36875156, ...,  0.00738274,
             0.02551364,  0.02551364],
           ...,
           [ 0.3107925 ,  0.24259087,  0.32737666, ..., -0.01273792,
            -0.1670802 , -0.1670802 ],
           [ 0.4616229 ,  0.2710536 ,  0.2651179 , ..., -0.4438739 ,
            -0.41211936, -0.41211936],
           [ 0.29037493,  0.28831556,  0.31482404, ..., -0.48989218,
            -0.4656695 , -0.4656695 ]], dtype=float32)

  • sea_surface_height
    (trajectory, time)
    float32
    -0.4947 -0.5347 ... -0.5601 -0.5601

    minval :

    -0.84050506

    maxval :

    -0.08327192

    array([[-0.49472013, -0.53470385, -0.567498  , ..., -0.38285908,
            -0.4209283 , -0.4209283 ],
           [-0.5123285 , -0.5520962 , -0.5856541 , ..., -0.46352547,
            -0.4999172 , -0.4999172 ],
           [-0.5057657 , -0.5460707 , -0.5798734 , ..., -0.41175213,
            -0.44738573, -0.44738573],
           ...,
           [-0.5105079 , -0.5506043 , -0.5847168 , ..., -0.47139177,
            -0.5049569 , -0.5049569 ],
           [-0.5008657 , -0.5419055 , -0.57545197, ..., -0.4942563 ,
            -0.5288203 , -0.5288203 ],
           [-0.52453184, -0.56277037, -0.5945523 , ..., -0.5231662 ,
            -0.56007093, -0.56007093]], dtype=float32)

  • x_wind
    (trajectory, time)
    float32
    -8.09 -7.911 -7.643 ... -9.0 -9.0

    minval :

    -11.508168

    maxval :

    -4.7403164

    array([[-8.090345 , -7.910705 , -7.6431856, ..., -9.688348 , -9.906655 ,
            -9.906655 ],
           [-8.159502 , -7.958801 , -7.6729817, ..., -9.502145 , -9.625824 ,
            -9.625824 ],
           [-8.080237 , -7.889221 , -7.611968 , ..., -9.734371 , -9.894952 ,
            -9.894952 ],
           ...,
           [-8.141199 , -7.9445353, -7.6622796, ..., -9.356882 , -9.656195 ,
            -9.656195 ],
           [-8.067741 , -7.8753033, -7.5990744, ..., -9.429169 , -9.493925 ,
            -9.493925 ],
           [-8.163033 , -7.930762 , -7.6535387, ..., -9.111547 , -8.999605 ,
            -8.999605 ]], dtype=float32)

  • y_wind
    (trajectory, time)
    float32
    0.7194 0.9431 ... -2.007 -2.007

    minval :

    -6.429127

    maxval :

    2.0374117

    array([[ 0.71940804,  0.94313365,  1.1898365 , ..., -2.0000923 ,
            -2.0355222 , -2.0355222 ],
           [ 0.681175  ,  1.0100479 ,  1.2726612 , ..., -2.1466124 ,
            -2.0221796 , -2.0221796 ],
           [ 0.8159917 ,  1.0769408 ,  1.3103503 , ..., -2.1221545 ,
            -2.0902402 , -2.0902402 ],
           ...,
           [ 0.75441754,  1.0604069 ,  1.3112794 , ..., -2.2564192 ,
            -2.2857194 , -2.2857194 ],
           [ 0.8372316 ,  1.0630052 ,  1.2879359 , ..., -2.1476572 ,
            -2.03222   , -2.03222   ],
           [ 0.5460506 ,  0.87709254,  1.111013  , ..., -2.074408  ,
            -2.0070891 , -2.0070891 ]], dtype=float32)

  • land_binary_mask
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    minval :

    0.0

    maxval :

    0.0

    array([[0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           ...,
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.]], dtype=float32)

  • sea_floor_depth_below_sea_level
    (trajectory, time)
    float32
    21.79 21.53 21.51 ... 23.93 23.93

    minval :

    7.1450205

    maxval :

    95.192955

    array([[21.792294, 21.532307, 21.50854 , ..., 52.33441 , 51.61755 ,
            51.61755 ],
           [14.24523 , 14.388374, 14.439414, ..., 50.381847, 48.56775 ,
            48.56775 ],
           [17.367235, 17.339231, 17.389572, ..., 47.273815, 44.25128 ,
            44.25128 ],
           ...,
           [14.731607, 14.723412, 14.857209, ..., 48.767433, 51.58411 ,
            51.58411 ],
           [19.260666, 19.030777, 19.051893, ..., 31.83528 , 31.052368,
            31.052368],
           [12.990259, 13.278816, 13.602015, ..., 24.123175, 23.929525,
            23.929525]], dtype=float32)

  • ocean_vertical_diffusivity
    (trajectory, time)
    float32
    0.0001 0.0001 ... 0.0001 0.0001

    minval :

    1e-04

    maxval :

    1e-04

    array([[1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04],
           [1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04],
           [1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04],
           ...,
           [1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04],
           [1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04],
           [1.e-04, 1.e-04, 1.e-04, ..., 1.e-04, 1.e-04, 1.e-04]],
          dtype=float32)

  • sea_water_temperature
    (trajectory, time)
    float32
    5.362 6.031 5.926 ... 6.891 6.891

    minval :

    4.2143564

    maxval :

    7.2001123

    array([[5.3617573, 6.031125 , 5.9262547, ..., 6.765414 , 6.7758293,
            6.7758293],
           [5.494902 , 5.295043 , 5.278674 , ..., 7.073201 , 7.0279074,
            7.0279074],
           [5.5839095, 6.0673823, 5.449292 , ..., 6.6725245, 6.6603475,
            6.6603475],
           ...,
           [5.402687 , 5.7328296, 5.3876767, ..., 6.984727 , 7.123018 ,
            7.123018 ],
           [5.231837 , 5.7788754, 5.766254 , ..., 7.0317607, 7.0289116,
            7.0289116],
           [5.1863947, 5.1946154, 5.1644125, ..., 6.8985248, 6.890899 ,
            6.890899 ]], dtype=float32)

  • sea_water_salinity
    (trajectory, time)
    float32
    29.32 31.03 30.76 ... 34.78 34.78

    minval :

    28.264374

    maxval :

    34.899765

    array([[29.321522, 31.031368, 30.755005, ..., 34.758644, 34.771683,
            34.771683],
           [29.963818, 29.593721, 29.590254, ..., 34.849873, 34.832684,
            34.832684],
           [29.989578, 31.092476, 29.698545, ..., 34.37238 , 34.375576,
            34.375576],
           ...,
           [29.738686, 30.404858, 29.718737, ..., 34.703697, 34.828075,
            34.828075],
           [29.094799, 30.389072, 30.341038, ..., 34.83157 , 34.83272 ,
            34.83272 ],
           [29.697931, 29.716967, 29.699717, ..., 34.775684, 34.776134,
            34.776134]], dtype=float32)

  • upward_sea_water_velocity
    (trajectory, time)
    float32
    -4.95e-05 -2.932e-05 ... 1.054e-05

    minval :

    -0.0019775021

    maxval :

    0.0023927914

    array([[-4.94968917e-05, -2.93163012e-05, -3.02583994e-05, ...,
             9.63145358e-05,  1.23500082e-04,  1.23500082e-04],
           [-8.98836370e-05, -5.59098735e-05, -4.87463258e-05, ...,
             6.02827291e-04,  1.77140919e-06,  1.77140919e-06],
           [-1.00992096e-04, -5.54237631e-05, -7.96216918e-05, ...,
             1.11015615e-04,  3.11543226e-05,  3.11543226e-05],
           ...,
           [-6.58737481e-05, -1.02226957e-04, -8.00835769e-05, ...,
             6.36054756e-05,  5.91195014e-04,  5.91195014e-04],
           [-6.95577328e-05, -6.57783312e-05, -4.94527885e-05, ...,
            -1.10224450e-04,  1.93944681e-04,  1.93944681e-04],
           [-5.06986544e-05, -4.98867121e-05, -1.89861767e-05, ...,
            -5.28403580e-05,  1.05428380e-05,  1.05428380e-05]], dtype=float32)

  • spm
    (trajectory, time)
    float32
    1.0 1.0 1.0 1.0 ... 1.0 1.0 1.0 1.0

    minval :

    1.0

    maxval :

    1.0

    array([[1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           ...,
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.],
           [1., 1., 1., ..., 1., 1., 1.]], dtype=float32)

  • ocean_mixed_layer_thickness
    (trajectory, time)
    float32
    40.0 40.0 40.0 ... 40.0 40.0 40.0

    minval :

    40.0

    maxval :

    40.0

    array([[40., 40., 40., ..., 40., 40., 40.],
           [40., 40., 40., ..., 40., 40., 40.],
           [40., 40., 40., ..., 40., 40., 40.],
           ...,
           [40., 40., 40., ..., 40., 40., 40.],
           [40., 40., 40., ..., 40., 40., 40.],
           [40., 40., 40., ..., 40., 40., 40.]], dtype=float32)

  • active_sediment_layer_thickness
    (trajectory, time)
    float32
    0.03 0.03 0.03 ... 0.03 0.03 0.03

    minval :

    0.03

    maxval :

    0.03

    array([[0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03],
           [0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03],
           [0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03],
           ...,
           [0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03],
           [0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03],
           [0.03, 0.03, 0.03, ..., 0.03, 0.03, 0.03]], dtype=float32)

  • doc
    (trajectory, time)
    float32
    0.0 0.0 0.0 0.0 ... 0.0 0.0 0.0 0.0

    minval :

    0.0

    maxval :

    0.0

    array([[0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           ...,
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.],
           [0., 0., 0., ..., 0., 0., 0.]], dtype=float32)

  • sea_water_ph_reported_on_total_scale
    (trajectory, time)
    float32
    8.1 8.1 8.1 8.1 ... 8.1 8.1 8.1 8.1

    minval :

    8.1

    maxval :

    8.1

    array([[8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1],
           [8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1],
           [8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1],
           ...,
           [8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1],
           [8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1],
           [8.1, 8.1, 8.1, ..., 8.1, 8.1, 8.1]], dtype=float32)

  • pH_sediment
    (trajectory, time)
    float32
    6.9 6.9 6.9 6.9 ... 6.9 6.9 6.9 6.9

    minval :

    6.9

    maxval :

    6.9

    array([[6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9],
           [6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9],
           [6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9],
           ...,
           [6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9],
           [6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9],
           [6.9, 6.9, 6.9, ..., 6.9, 6.9, 6.9]], dtype=float32)

• Indexes: (2)
  • trajectory
    PandasIndex

    PandasIndex(Index([  0,   1,   2,   3,   4,   5,   6,   7,   8,   9,
           ...
           490, 491, 492, 493, 494, 495, 496, 497, 498, 499],
          dtype='int64', name='trajectory', length=500))

  • time
    PandasIndex

    PandasIndex(DatetimeIndex(['2025-02-08 17:11:25.118634', '2025-02-08 17:41:25.118634',
                   '2025-02-08 18:11:25.118634', '2025-02-08 18:41:25.118634',
                   '2025-02-08 19:11:25.118634', '2025-02-08 19:41:25.118634',
                   '2025-02-08 20:11:25.118634', '2025-02-08 20:41:25.118634',
                   '2025-02-08 21:11:25.118634', '2025-02-08 21:41:25.118634',
                   '2025-02-08 22:11:25.118634', '2025-02-08 22:41:25.118634',
                   '2025-02-08 23:11:25.118634', '2025-02-08 23:41:25.118634',
                   '2025-02-09 00:11:25.118634', '2025-02-09 00:41:25.118634',
                   '2025-02-09 01:11:25.118634', '2025-02-09 01:41:25.118634',
                   '2025-02-09 02:11:25.118634', '2025-02-09 02:41:25.118634',
                   '2025-02-09 03:11:25.118634', '2025-02-09 03:41:25.118634',
                   '2025-02-09 04:11:25.118634', '2025-02-09 04:41:25.118634',
                   '2025-02-09 05:11:25.118634', '2025-02-09 05:41:25.118634',
                   '2025-02-09 06:11:25.118634', '2025-02-09 06:41:25.118634',
                   '2025-02-09 07:11:25.118634', '2025-02-09 07:41:25.118634',
                   '2025-02-09 08:11:25.118634', '2025-02-09 08:41:25.118634',
                   '2025-02-09 09:11:25.118634', '2025-02-09 09:41:25.118634',
                   '2025-02-09 10:11:25.118634', '2025-02-09 10:41:25.118634',
                   '2025-02-09 11:11:25.118634', '2025-02-09 11:41:25.118634',
                   '2025-02-09 12:11:25.118634', '2025-02-09 12:41:25.118634',
                   '2025-02-09 13:11:25.118634', '2025-02-09 13:41:25.118634',
                   '2025-02-09 14:11:25.118634', '2025-02-09 14:41:25.118634',
                   '2025-02-09 15:11:25.118634', '2025-02-09 15:41:25.118634',
                   '2025-02-09 16:11:25.118634', '2025-02-09 16:41:25.118634',
                   '2025-02-09 17:11:25.118634', '2025-02-09 17:41:25.118634',
                   '2025-02-09 18:11:25.118634', '2025-02-09 18:41:25.118634',
                   '2025-02-09 19:11:25.118634', '2025-02-09 19:41:25.118634',
                   '2025-02-09 20:11:25.118634', '2025-02-09 20:41:25.118634',
                   '2025-02-09 21:11:25.118634', '2025-02-09 21:41:25.118634',
                   '2025-02-09 22:11:25.118634', '2025-02-09 22:41:25.118634',
                   '2025-02-09 23:11:25.118634', '2025-02-09 23:41:25.118634',
                   '2025-02-10 00:11:25.118634', '2025-02-10 00:41:25.118634',
                   '2025-02-10 01:11:25.118634', '2025-02-10 01:41:25.118634',
                   '2025-02-10 02:11:25.118634', '2025-02-10 02:41:25.118634',
                   '2025-02-10 03:11:25.118634', '2025-02-10 03:41:25.118634',
                   '2025-02-10 04:11:25.118634', '2025-02-10 04:41:25.118634',
                   '2025-02-10 05:11:25.118634', '2025-02-10 05:41:25.118634',
                   '2025-02-10 06:11:25.118634', '2025-02-10 06:41:25.118634',
                   '2025-02-10 07:11:25.118634', '2025-02-10 07:41:25.118634',
                   '2025-02-10 08:11:25.118634', '2025-02-10 08:41:25.118634',
                   '2025-02-10 09:11:25.118634', '2025-02-10 09:41:25.118634',
                   '2025-02-10 10:11:25.118634', '2025-02-10 10:41:25.118634',
                   '2025-02-10 11:11:25.118634', '2025-02-10 11:41:25.118634',
                   '2025-02-10 12:11:25.118634', '2025-02-10 12:41:25.118634',
                   '2025-02-10 13:11:25.118634', '2025-02-10 13:41:25.118634',
                   '2025-02-10 14:11:25.118634', '2025-02-10 14:41:25.118634',
                   '2025-02-10 15:11:25.118634', '2025-02-10 15:41:25.118634',
                   '2025-02-10 16:11:25.118634', '2025-02-10 16:41:25.118634',
                   '2025-02-10 17:11:25.118634'],
                  dtype='datetime64[ns]', name='time', freq='30min'))

• Attributes: (208)

  Conventions :

  CF-1.11, ACDD-1.3

  standard_name_vocabulary :

  CF Standard Name Table v85

  featureType :

  trajectory

  title :

  OpenDrift trajectory simulation

  summary :

  Output from simulation with OpenDrift framework

  keywords :

  trajectory, drift, lagrangian, simulation

  history :

  Created 2025-02-18 17:11:29.519149

  date_created :

  2025-02-18T17:11:29.519161

  source :

  Output from simulation with OpenDrift

  model_url :

  https://github.com/OpenDrift/opendrift

  opendrift_class :

  ChemicalDrift

  opendrift_module :

  opendrift.models.chemicaldrift

  readers :

  odict_keys(['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be', 'constant_reader', 'global_landmask'])

  time_coverage_start :

  2025-02-08 17:11:25.118634

  time_step_calculation :

  0:30:00

  time_step_output :

  0:30:00

  config_environment:constant:x_sea_water_velocity :

  None

  config_environment:fallback:x_sea_water_velocity :

  None

  config_environment:constant:y_sea_water_velocity :

  None

  config_environment:fallback:y_sea_water_velocity :

  None

  config_environment:constant:sea_surface_height :

  None

  config_environment:fallback:sea_surface_height :

  0

  config_environment:constant:x_wind :

  None

  config_environment:fallback:x_wind :

  0

  config_environment:constant:y_wind :

  None

  config_environment:fallback:y_wind :

  0

  config_environment:constant:land_binary_mask :

  None

  config_environment:fallback:land_binary_mask :

  None

  config_environment:constant:sea_floor_depth_below_sea_level :

  None

  config_environment:fallback:sea_floor_depth_below_sea_level :

  10000

  config_environment:constant:ocean_vertical_diffusivity :

  None

  config_environment:fallback:ocean_vertical_diffusivity :

  0.0001

  config_environment:constant:sea_water_temperature :

  None

  config_environment:fallback:sea_water_temperature :

  10

  config_environment:constant:sea_water_salinity :

  None

  config_environment:fallback:sea_water_salinity :

  34

  config_environment:constant:upward_sea_water_velocity :

  None

  config_environment:fallback:upward_sea_water_velocity :

  0

  config_environment:constant:spm :

  None

  config_environment:fallback:spm :

  1

  config_environment:constant:ocean_mixed_layer_thickness :

  None

  config_environment:fallback:ocean_mixed_layer_thickness :

  50

  config_environment:constant:active_sediment_layer_thickness :

  None

  config_environment:fallback:active_sediment_layer_thickness :

  0.03

  config_environment:constant:doc :

  None

  config_environment:fallback:doc :

  0.0

  config_environment:constant:sea_water_ph_reported_on_total_scale :

  None

  config_environment:fallback:sea_water_ph_reported_on_total_scale :

  8.1

  config_environment:constant:pH_sediment :

  None

  config_environment:fallback:pH_sediment :

  6.9

  config_general:use_auto_landmask :

  True

  config_drift:current_uncertainty :

  0

  config_drift:current_uncertainty_uniform :

  0

  config_drift:max_speed :

  2.0

  config_readers:max_number_of_fails :

  1

  config_general:simulation_name :

  config_general:coastline_action :

  previous

  config_general:coastline_approximation_precision :

  0.001

  config_general:time_step_minutes :

  60

  config_general:time_step_output_minutes :

  None

  config_seed:ocean_only :

  True

  config_seed:number :

  1

  config_drift:max_age_seconds :

  None

  config_drift:advection_scheme :

  euler

  config_drift:horizontal_diffusivity :

  0

  config_drift:profiles_depth :

  50

  config_drift:wind_uncertainty :

  0

  config_drift:relative_wind :

  False

  config_drift:deactivate_north_of :

  None

  config_drift:deactivate_south_of :

  None

  config_drift:deactivate_east_of :

  None

  config_drift:deactivate_west_of :

  None

  config_seed:origin_marker :

  0

  config_seed:z :

  0

  config_seed:wind_drift_factor :

  0.02

  config_seed:current_drift_factor :

  1

  config_seed:terminal_velocity :

  0.0

  config_seed:diameter :

  0.0

  config_seed:density :

  2650.0

  config_seed:specie :

  0

  config_seed:mass :

  1000.0

  config_seed:mass_degraded :

  0

  config_seed:mass_degraded_water :

  0

  config_seed:mass_degraded_sediment :

  0

  config_seed:mass_volatilized :

  0

  config_drift:vertical_advection :

  True

  config_drift:vertical_mixing :

  True

  config_vertical_mixing:timestep :

  60

  config_vertical_mixing:diffusivitymodel :

  windspeed_Large1994

  config_vertical_mixing:background_diffusivity :

  1.2e-05

  config_vertical_mixing:TSprofiles :

  False

  config_drift:wind_drift_depth :

  0.1

  config_drift:stokes_drift :

  True

  config_drift:stokes_drift_profile :

  Phillips

  config_drift:use_tabularised_stokes_drift :

  False

  config_drift:tabularised_stokes_drift_fetch :

  25000

  config_general:seafloor_action :

  lift_to_seafloor

  config_drift:truncate_ocean_model_below_m :

  None

  config_seed:seafloor :

  False

  config_chemical:transfer_setup :

  organics

  config_chemical:dynamic_partitioning :

  True

  config_chemical:slowly_fraction :

  False

  config_chemical:irreversible_fraction :

  False

  config_chemical:dissolved_diameter :

  0

  config_chemical:particle_diameter :

  3e-05

  config_chemical:particle_concentration_half_depth :

  20

  config_chemical:doc_concentration_half_depth :

  1000

  config_chemical:particle_diameter_uncertainty :

  5e-06

  config_seed:LMM_fraction :

  0.9

  config_seed:particle_fraction :

  0.1

  config_chemical:species:LMM :

  True

  config_chemical:species:LMMcation :

  False

  config_chemical:species:LMManion :

  False

  config_chemical:species:Colloid :

  False

  config_chemical:species:Humic_colloid :

  True

  config_chemical:species:Polymer :

  False

  config_chemical:species:Particle_reversible :

  True

  config_chemical:species:Particle_slowly_reversible :

  False

  config_chemical:species:Particle_irreversible :

  False

  config_chemical:species:Sediment_reversible :

  True

  config_chemical:species:Sediment_slowly_reversible :

  True

  config_chemical:species:Sediment_irreversible :

  False

  config_chemical:transformations:Kd :

  2.0

  config_chemical:transformations:S0 :

  0.0

  config_chemical:transformations:Dc :

  1.16e-05

  config_chemical:transformations:slow_coeff :

  0

  config_chemical:transformations:volatilization :

  True

  config_chemical:transformations:degradation :

  True

  config_chemical:transformations:degradation_mode :

  OverallRateConstants

  config_chemical:transformations:dissociation :

  nondiss

  config_chemical:transformations:LogKOW :

  4.505

  config_chemical:transformations:TrefKOW :

  25.0

  config_chemical:transformations:DeltaH_KOC_Sed :

  -24900.0

  config_chemical:transformations:DeltaH_KOC_DOM :

  -25900.0

  config_chemical:transformations:Setchenow :

  0.3026

  config_chemical:transformations:pKa_acid :

  -1

  config_chemical:transformations:pKa_base :

  -1

  config_chemical:transformations:KOC_DOM :

  -1

  config_chemical:transformations:KOC_sed :

  -1

  config_chemical:transformations:fOC_SPM :

  0.05

  config_chemical:transformations:fOC_sed :

  0.05

  config_chemical:transformations:aggregation_rate :

  0

  config_chemical:transformations:t12_W_tot :

  6.0

  config_chemical:transformations:Tref_kWt :

  25.0

  config_chemical:transformations:DeltaH_kWt :

  50000.0

  config_chemical:transformations:t12_S_tot :

  12.0

  config_chemical:transformations:Tref_kSt :

  25.0

  config_chemical:transformations:DeltaH_kSt :

  50000.0

  config_chemical:transformations:MolWt :

  178.226

  config_chemical:transformations:Henry :

  4.294e-05

  config_chemical:transformations:Vpress :

  0.0222

  config_chemical:transformations:Tref_Vpress :

  25.0

  config_chemical:transformations:DeltaH_Vpress :

  71733.0

  config_chemical:transformations:Solub :

  1.09

  config_chemical:transformations:Tref_Solub :

  25.0

  config_chemical:transformations:DeltaH_Solub :

  34800.0

  config_chemical:sediment:mixing_depth :

  0.03

  config_chemical:sediment:density :

  2600

  config_chemical:sediment:effective_fraction :

  0.9

  config_chemical:sediment:corr_factor :

  0.1

  config_chemical:sediment:porosity :

  0.6

  config_chemical:sediment:layer_thickness :

  1

  config_chemical:sediment:desorption_depth :

  1

  config_chemical:sediment:desorption_depth_uncert :

  0.5

  config_chemical:sediment:resuspension_depth :

  1

  config_chemical:sediment:resuspension_depth_uncert :

  0.5

  config_chemical:sediment:resuspension_critvel :

  0.15

  config_chemical:sediment:burial_rate :

  3e-05

  config_chemical:sediment:buried_leaking_rate :

  0

  config_chemical:compound :

  Phenanthrene

  opendrift_version :

  1.13.0

  seed_geojson :

  {"features": [], "type": "FeatureCollection"}

  simulation_time :

  2025-02-18 17:11:29.530063

  reader_x_sea_water_velocity :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_y_sea_water_velocity :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_sea_surface_height :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_x_wind :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_y_wind :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_land_binary_mask :

  ['global_landmask']

  reader_sea_floor_depth_below_sea_level :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_ocean_vertical_diffusivity :

  0.0001

  reader_sea_water_temperature :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_sea_water_salinity :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_upward_sea_water_velocity :

  ['https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be']

  reader_spm :

  1

  reader_ocean_mixed_layer_thickness :

  40

  reader_active_sediment_layer_thickness :

  0.03

  reader_doc :

  0.0

  reader_sea_water_ph_reported_on_total_scale :

  8.1

  reader_pH_sediment :

  6.9

  time_coverage_end :

  2025-02-10 17:11:25.118634

  time_coverage_duration :

  P2DT0H0M0S

  time_coverage_resolution :

  P0DT0H30M0S

  performance :

  -------------------- Reader performance: -------------------- https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be 0:01:37.9 total 0:00:00.0 preparing 0:01:36.2 reading 0:00:00.9 interpolation 0:00:00.1 interpolation_time 0:00:01.6 rotating vectors 0:00:00.0 masking -------------------- constant_reader 0:00:00.0 total 0:00:00.0 preparing 0:00:00.0 reading 0:00:00.0 masking -------------------- global_landmask 0:00:01.6 total 0:00:00.0 preparing 0:00:01.6 reading 0:00:00.0 masking -------------------- Performance: 1:53.5 total time 6.5 configuration 0.0 preparing main loop 0.0 moving elements to ocean 1:47.0 main loop 2.8 updating elements 2.3 vertical mixing 0.0 cleaning up --------------------

  geospatial_bounds_crs :

  EPSG:4326

  geospatial_bounds_vertical_crs :

  EPSG:5831

  geospatial_lat_min :

  57.466686

  geospatial_lat_max :

  57.849186

  geospatial_lat_units :

  degrees_north

  geospatial_lat_resolution :

  point

  geospatial_lon_min :

  9.507622

  geospatial_lon_max :

  10.759372

  geospatial_lon_units :

  degrees_east

  geospatial_lon_resolution :

  point

  runtime :

  0:01:53.580018

  geospatial_vertical_min :

  -52.458706

  geospatial_vertical_max :

  0.0

  geospatial_vertical_positive :

  up

Print and plot results

print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int32(item)) for item in o.ntransformations[isp,:]]) )

m_pre = o.result.mass.isel(time=-1).sum()
m_deg = o.result.mass_degraded.isel(time=-1).sum()
m_vol = o.result.mass_volatilized.isel(time=-1).sum()
m_tot = m_pre + m_deg + m_vol

print('Mass budget for target chemical:')
print('mass preserved       : {:.3f}'.format(m_pre * 1e-6),' g   {:.3f}'.format(m_pre/m_tot*100),'%')
print('mass degraded        : {:.3f}'.format(m_deg * 1e-6),' g   {:.3f}'.format(m_deg/m_tot*100),'%')
print('mass volatilized     : {:.3f}'.format(m_vol * 1e-6),' g   {:.3f}'.format(m_vol/m_tot*100),'%')

legend=['dissolved', '', 'SPM', 'sediment', '']

o.animation_profile(color='specie',
            markersize='mass',
            markersize_scaling=30,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            legend = legend,
            legend_loc = 3,
            fps = 10
            )

Final speciation:
LMM                             :    237
Humic colloid                   :      0
Particle reversible             :    262
Sediment reversible             :      1
Sediment slowly reversible      :      0
Number of transformations:
['        0', '        0', '        0', '      415', '        0']
['        0', '        0', '        0', '        0', '        0']
['      203', '        0', '        0', '      663', '        0']
['        0', '        0', '     1077', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
Mass budget for target chemical:
mass preserved       : 0.538  g   53.761 %
mass degraded        : 0.458  g   45.829 %
mass volatilized     : 0.004  g   0.409 %
17:13:16 DEBUG   opendrift:3055: Saving animation..
17:13:16 INFO    opendrift:4611: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_0.gif...
17:13:30 DEBUG   opendrift:4649: MPLBACKEND = agg
17:13:30 DEBUG   opendrift:4650: DISPLAY = None
17:13:30 DEBUG   opendrift:4651: Time to save animation: 0:00:13.058141
17:13:30 INFO    opendrift:3259: Time to make animation: 0:00:13.276461

o.animation(color='specie',
            markersize='mass',
            markersize_scaling=100,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            fast = True,
            legend = legend,
            legend_loc = 3,
            fps=10
            )

17:13:30 DEBUG   opendrift:2398: Setting up map: corners=None, fast=True, lscale=None
17:13:30 WARNING opendrift:2429: Plotting fast. This will make your plots less accurate.
17:13:31 DEBUG   opendrift:3055: Saving animation..
17:13:31 INFO    opendrift:4611: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_1.gif...
17:14:41 DEBUG   opendrift:4649: MPLBACKEND = agg
17:14:41 DEBUG   opendrift:4650: DISPLAY = None
17:14:41 DEBUG   opendrift:4651: Time to save animation: 0:01:10.194963
17:14:41 INFO    opendrift:3048: Time to make animation: 0:01:11.633187

o.plot_mass(legend = legend,
            time_unit = 'hours',
            title = 'Chemical mass budget')

17:14:41 WARNING opendrift:4424: Method get_property is obsolete and will soon be removed. Use o.result.<property> instead.
17:14:41 WARNING opendrift:4424: Method get_property is obsolete and will soon be removed. Use o.result.<property> instead.
dissolved : 0.17133365625g (31.869242271726925%)
SPM : 0.36514518749999997g (67.91952439170954%)
sediment : 0.0011356209716796874g (0.21123333656351537%)
/root/project/opendrift/models/chemicaldrift.py:3007: UserWarning: set_ticklabels() should only be used with a fixed number of ticks, i.e. after set_ticks() or using a FixedLocator.
  ax.axes.get_xaxis().set_ticklabels(np.round(ax.axes.get_xticks() * time_conversion_factor))