ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic, reader_ROMS_native
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

17:05:45 DEBUG   opendrift.config:161: Adding 16 config items from __init__
17:05:45 DEBUG   opendrift.config:171:   Overwriting config item readers:max_number_of_fails
17:05:45 DEBUG   opendrift.config:161: Adding 13 config items from __init__
17:05:45 INFO    opendrift.models.basemodel:533: OpenDriftSimulation initialised (version 1.11.2 / v1.11.2-17-g1eadfa7)
17:05:45 DEBUG   opendrift.config:161: Adding 16 config items from oceandrift
17:05:45 DEBUG   opendrift.config:171:   Overwriting config item seed:z
17:05:45 DEBUG   opendrift.config:161: Adding 71 config items from chemicaldrift
17:05:45 INFO    opendrift.readers.reader_netCDF_CF_generic:102: Opening dataset: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:05:51 DEBUG   opendrift.readers.reader_netCDF_CF_generic:119: Finding coordinate variables.
17:05:51 DEBUG   opendrift.readers.reader_netCDF_CF_generic:134: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
17:05:51 INFO    opendrift.readers.reader_netCDF_CF_generic:314: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
17:05:51 DEBUG   opendrift.readers.reader_netCDF_CF_generic:340: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
17:05:51 DEBUG   opendrift.readers.basereader.variables:602: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
17:05:51 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
17:05:51 DEBUG   opendrift.readers.basereader.variables:557: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
17:05:51 DEBUG   opendrift.readers.basereader.variables:557: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
17:05:51 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
17:05:51 DEBUG   opendrift.readers.basereader.variables:602: Setting buffer size 7 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 1 m/s and time span of 1:00:00
17:05:51 DEBUG   opendrift.models.basemodel.environment:333: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
17:05:51 DEBUG   opendrift.models.basemodel.environment:333: Added reader constant_reader
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:sea_surface_height [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_surface_height [0] float min: None, max: None [None] Fallback value for s...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: -20, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: -20, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:max_speed                     [1.0] float min: 0, max: inf [seconds] Typical maximum spee...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:profiles_depth                [50] float min: 0, max: None [meters] Environment profiles...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
general:seafloor_action_dcrit       [0.0] float min: 0.0, max: 10000 [m] This parameter repre...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

05:51 DEBUG   opendrift.models.chemicaldrift:870: Partitioning coefficients (Tref,freshwater)
05:51 DEBUG   opendrift.models.chemicaldrift:871: KOC_sed: 12953.922406542462 L/KgOC
05:51 DEBUG   opendrift.models.chemicaldrift:872: KOC_SPM: 12953.922406542462 L/KgOC
05:51 DEBUG   opendrift.models.chemicaldrift:873: KOC_DOM: 3004.29439651874 L/KgOC
05:51 DEBUG   opendrift.models.chemicaldrift:885: Kd_sed: 647.6961203271231 L/Kg
05:51 DEBUG   opendrift.models.chemicaldrift:886: Kd_SPM: 647.6961203271231 L/Kg
05:51 DEBUG   opendrift.models.chemicaldrift:887: Kd_DOM: 1580.2588525688573 L/Kg
05:51 DEBUG   opendrift.models.chemicaldrift:1104: nspecies: 5
05:51 DEBUG   opendrift.models.chemicaldrift:1105: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
05:51 DEBUG   opendrift.models.chemicaldrift:509: Initial partitioning:
05:51 DEBUG   opendrift.models.chemicaldrift:511:       449   0 LMM
05:51 DEBUG   opendrift.models.chemicaldrift:511:         0   1 Humic colloid
05:51 DEBUG   opendrift.models.chemicaldrift:511:        51   2 Particle reversible
05:51 DEBUG   opendrift.models.chemicaldrift:511:         0   3 Sediment reversible
05:51 DEBUG   opendrift.models.chemicaldrift:511:         0   4 Sediment slowly reversible
05:51 INFO    opendrift.models.basemodel.environment:218: Adding a dynamical landmask with max. priority based on assumed maximum speed of 1.0 m/s. Adding a customised landmask may be faster...
05:51 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
05:57 DEBUG   opendrift.models.basemodel.environment:333: Added reader global_landmask
05:57 INFO    opendrift.models.basemodel.environment:245: Fallback values will be used for the following variables which have no readers:
05:57 INFO    opendrift.models.basemodel.environment:248:    sea_surface_height: 0.000000
05:57 INFO    opendrift.models.basemodel.environment:248:    ocean_vertical_diffusivity: 0.000100
05:57 INFO    opendrift.models.basemodel.environment:248:    spm: 1.000000
05:57 INFO    opendrift.models.basemodel.environment:248:    active_sediment_layer_thickness: 0.030000
05:57 INFO    opendrift.models.basemodel.environment:248:    doc: 0.000000
05:57 INFO    opendrift.models.basemodel.environment:248:    sea_water_ph_reported_on_total_scale: 8.100000
05:57 INFO    opendrift.models.basemodel.environment:248:    pH_sediment: 6.900000
05:57 DEBUG   opendrift.models.basemodel:92: Changed mode from Mode.Config to Mode.Ready

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

05:57 DEBUG   opendrift.models.basemodel:92: Changed mode from Mode.Ready to Mode.Run
05:57 DEBUG   opendrift.models.basemodel:1749:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.11.2
  Platform: Linux, 5.15.0-1053-aws
05992889404297 GB memory
processors (x86_64)
  NumPy version 1.26.4
  SciPy version 1.13.0
  Matplotlib version 3.8.3
  NetCDF4 version 1.6.1
  Xarray version 2024.3.0
  Python version 3.11.6 | packaged by conda-forge | (main, Oct  3 2023, 10:40:35) [GCC 12.3.0]
------------------------------------------------------

05:57 DEBUG   opendrift.models.basemodel:1763: No output file is specified, neglecting export_buffer_length
05:57 DEBUG   opendrift.models.basemodel:1881: Finalizing environment and preparing readers for simulation coverage ([7.601756713767218, 55.98946593001082, 13.6114371796654, 59.20488526627824]) and time (2024-04-02 17:05:51.781100 to 2024-04-04 17:05:51.781100)
05:57 DEBUG   opendrift.models.basemodel.environment:180:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be for extent [7.601756713767218, 55.98946593001082, 13.6114371796654, 59.20488526627824]
05:57 DEBUG   opendrift.readers.basereader.structured:153: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
05:57 DEBUG   opendrift.readers.basereader:188: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
05:57 DEBUG   opendrift.models.basemodel.environment:180:    Preparing constant_reader for extent [7.601756713767218, 55.98946593001082, 13.6114371796654, 59.20488526627824]
05:57 DEBUG   opendrift.readers.basereader:188: Nothing more to prepare for constant_reader
05:57 DEBUG   opendrift.models.basemodel.environment:180:    Preparing global_landmask for extent [7.601756713767218, 55.98946593001082, 13.6114371796654, 59.20488526627824]
05:57 DEBUG   opendrift.readers.basereader:188: Nothing more to prepare for global_landmask
05:57 INFO    opendrift.models.basemodel:909: Using existing reader for land_binary_mask
05:57 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
05:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
05:57 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
05:57 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
05:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
05:57 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
05:57 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
05:57 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
05:57 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
05:57 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
05:57 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
05:57 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
05:57 INFO    opendrift.models.basemodel:920: All points are in ocean
05:57 INFO    opendrift.models.chemicaldrift:352: Number of species: 5
05:57 INFO    opendrift.models.chemicaldrift:354:   0 LMM
05:57 INFO    opendrift.models.chemicaldrift:354:   1 Humic colloid
05:57 INFO    opendrift.models.chemicaldrift:354:   2 Particle reversible
05:57 INFO    opendrift.models.chemicaldrift:354:   3 Sediment reversible
05:57 INFO    opendrift.models.chemicaldrift:354:   4 Sediment slowly reversible
05:57 INFO    opendrift.models.chemicaldrift:357: transfer setup: organics
05:57 INFO    opendrift.models.chemicaldrift:359: nspecies: 5
05:57 INFO    opendrift.models.chemicaldrift:360: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
05:57 DEBUG   opendrift.models.basemodel:864: to be seeded: 500, already seeded 0
05:57 DEBUG   opendrift.models.basemodel:882: Released 500 new elements.
05:57 WARNING opendrift.models.basemodel:706: Seafloor check not being run because sea_surface_height is missing. This will happen the first time the function is run but if it happens subsequently there is probably a problem.
05:57 DEBUG   opendrift.models.basemodel:2008: ======================================================================
05:57 INFO    opendrift.models.basemodel:2009: 2024-04-02 17:05:51.781100 - step 1 of 96 - 500 active elements (0 deactivated)
05:57 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
05:57 DEBUG   opendrift.models.basemodel:2017: ======================================================================
05:57 DEBUG   opendrift.models.basemodel:2028:               57.546223 <- latitude  -> 57.64813
05:57 DEBUG   opendrift.models.basemodel:2033:               10.507113 <- longitude -> 10.70608
05:57 DEBUG   opendrift.models.basemodel:2038:               -9.98847   <- z ->   -0.046954762
05:57 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
05:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
05:57 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
05:57 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
05:57 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
05:57 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 17:00:00 (before)
                2024-04-02 18:00:00 (after)
05:59 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
05:59 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
05:59 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
05:59 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
05:59 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
05:59 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
05:59 DEBUG   opendrift.readers.basereader.structured:288: Fetched env-block (size 28x27x7) for time before (2024-04-02 17:00:00)
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:01 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:01 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 28x27x7) for time after (2024-04-02 18:00:00)
06:01 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 17:00:00) in space  (linearNDFast)
06:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:01 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 18:00:00) in space  (linearNDFast)
06:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:01 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 17:00:00, weight 0.90) and
                      after (2024-04-02 18:00:00, weight 0.10) in time
06:01 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
06:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:01 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:01 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.20555 (min) 0.0345902 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.110901 (min) 0.256975 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.48478 (min) -3.96192 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.19149 (min) -6.61426 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.16356 (min) 5.49879 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0064 (min) 25.304 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000110187 (min) 9.86857e-05 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:01 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:01 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:01 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:01 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
06:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
06:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
06:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
06:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
06:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:01 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:01 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0511324680968846
06:01 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:01 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:01 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:01 DEBUG   opendrift.models.oceandrift:624: 3 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 45 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
06:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
06:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [450, 0, 49, 1, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:01 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:01 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:01 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:01 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:01 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:01 INFO    opendrift.models.basemodel:2009: 2024-04-02 17:35:51.781100 - step 2 of 96 - 500 active elements (0 deactivated)
06:01 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:01 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:01 DEBUG   opendrift.models.basemodel:2028:               57.547312901216074 <- latitude  -> 57.651684488662376
06:01 DEBUG   opendrift.models.basemodel:2033:               10.505029337380552 <- longitude -> 10.70019728533483
06:01 DEBUG   opendrift.models.basemodel:2038:               -20.198979947517735   <- z ->   -0.037302915560101235
06:01 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:01 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 17:00:00 (before)
                2024-04-02 18:00:00 (after)
06:01 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 17:00:00) in space  (linearNDFast)
06:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:01 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 18:00:00) in space  (linearNDFast)
06:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:01 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 17:00:00, weight 0.40) and
                      after (2024-04-02 18:00:00, weight 0.60) in time
06:01 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.494981749760704 and -59.29981377332632 degrees.
06:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.494981749760704 and -59.29981377332632 degrees.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:01 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:01 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:01 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:01 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.136029 (min) 0.0333577 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.112753 (min) 0.241626 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.45049 (min) -3.82799 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.12203 (min) -6.35929 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.45175 (min) 23.4437 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10196 (min) 5.66808 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1104 (min) 30.4897 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000156198 (min) 0.000175901 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:01 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:01 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 11 elements to seafloor.
06:01 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:01 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 31
06:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0]
06:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3]
06:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 30.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  2.  0.]
 [ 0.  0.  1.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
06:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:01 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:01 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04815533552834444
06:01 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:01 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:01 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:01 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
06:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
06:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [421, 0, 47, 32, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:01 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:01 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:01 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:01 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:01 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:01 INFO    opendrift.models.basemodel:2009: 2024-04-02 18:05:51.781100 - step 3 of 96 - 500 active elements (0 deactivated)
06:01 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:01 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:01 DEBUG   opendrift.models.basemodel:2028:               57.54767633482443 <- latitude  -> 57.655058290241605
06:01 DEBUG   opendrift.models.basemodel:2033:               10.502842496216173 <- longitude -> 10.697995068303456
06:01 DEBUG   opendrift.models.basemodel:2038:               -21.04969541889921   <- z ->   0.0
06:01 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:01 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 18:00:00 (before)
                2024-04-02 19:00:00 (after)
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:03 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:03 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 30x26x7) for time after (2024-04-02 19:00:00)
06:03 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 18:00:00) in space  (linearNDFast)
06:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:03 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 19:00:00) in space  (linearNDFast)
06:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:03 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 18:00:00, weight 0.90) and
                      after (2024-04-02 19:00:00, weight 0.10) in time
06:03 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49716858360124 and -59.302015981935796 degrees.
06:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49716858360124 and -59.302015981935796 degrees.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:03 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:03 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:03 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:03 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:03 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:03 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:03 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.134058 (min) 0.0448429 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.113241 (min) 0.236221 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.4714 (min) -3.642 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.97038 (min) -6.00902 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.3658 (min) 23.2364 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10984 (min) 5.64254 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0368 (min) 30.6947 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000122168 (min) 0.000240557 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:03 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 16 elements to seafloor.
06:03 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:03 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 24
06:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 54.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  8.  0.]
 [ 0.  0.  6.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
06:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:03 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:03 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.045345701993426704
06:03 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:03 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:03 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:03 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 29
06:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 29 elements
06:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [397, 0, 73, 30, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:03 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:03 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:03 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:03 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:03 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:03 INFO    opendrift.models.basemodel:2009: 2024-04-02 18:35:51.781100 - step 4 of 96 - 500 active elements (0 deactivated)
06:03 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:03 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:03 DEBUG   opendrift.models.basemodel:2028:               57.54701575041561 <- latitude  -> 57.65871605912028
06:03 DEBUG   opendrift.models.basemodel:2033:               10.500962717755728 <- longitude -> 10.696191227507956
06:03 DEBUG   opendrift.models.basemodel:2038:               -21.435255632290446   <- z ->   0.0
06:03 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:03 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 18:00:00 (before)
                2024-04-02 19:00:00 (after)
06:03 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 18:00:00) in space  (linearNDFast)
06:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:03 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 19:00:00) in space  (linearNDFast)
06:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:03 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 18:00:00, weight 0.40) and
                      after (2024-04-02 19:00:00, weight 0.60) in time
06:03 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49904838310783 and -59.30381983350016 degrees.
06:03 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49904838310783 and -59.30381983350016 degrees.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:03 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:03 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:03 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:03 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:03 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:03 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:03 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:03 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:03 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:03 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:03 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:03 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.136334 (min) 0.0623125 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.132127 (min) 0.229501 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.09925 (min) -3.49412 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.45557 (min) -5.3603 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.28154 (min) 23.0499 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.12845 (min) 5.61659 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0525 (min) 30.7299 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -1.99425e-05 (min) 0.000226887 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:03 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:03 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:03 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:03 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:03 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:03 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
06:03 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:03 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:03 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 75.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0. 11.  0.]
 [ 0.  0. 35.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
06:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:03 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:03 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:03 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04163811420282444
06:03 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:03 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:03 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:03 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:03 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:03 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:03 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
06:03 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:03 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
06:03 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:03 INFO    opendrift.models.chemicaldrift:1861: partitioning: [376, 0, 78, 46, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:03 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:03 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:03 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:03 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:03 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:03 INFO    opendrift.models.basemodel:2009: 2024-04-02 19:05:51.781100 - step 5 of 96 - 500 active elements (0 deactivated)
06:03 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:03 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:03 DEBUG   opendrift.models.basemodel:2028:               57.54728294116439 <- latitude  -> 57.66242526992215
06:03 DEBUG   opendrift.models.basemodel:2033:               10.49871639417887 <- longitude -> 10.694090033927386
06:03 DEBUG   opendrift.models.basemodel:2038:               -21.76405054834424   <- z ->   0.0
06:03 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:03 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:03 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:03 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:03 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:03 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 19:00:00 (before)
                2024-04-02 20:00:00 (after)
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:05 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 31x26x7) for time after (2024-04-02 20:00:00)
06:05 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 19:00:00) in space  (linearNDFast)
06:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:05 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 20:00:00) in space  (linearNDFast)
06:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:05 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 19:00:00, weight 0.90) and
                      after (2024-04-02 20:00:00, weight 0.10) in time
06:05 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.501294690783546 and -59.3059210181922 degrees.
06:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.501294690783546 and -59.3059210181922 degrees.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:05 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:05 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.140503 (min) 0.0550824 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.11979 (min) 0.220561 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -3.937 (min) -2.60602 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.96125 (min) -4.71409 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.18075 (min) 22.7865 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.13013 (min) 5.60098 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.073 (min) 30.9113 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.55383e-05 (min) 0.000255817 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:05 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 12 elements to seafloor.
06:05 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:05 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 23
06:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 98.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0. 19.  0.]
 [ 0.  0. 48.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
06:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:05 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:05 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03688396460189915
06:05 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:05 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:05 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
06:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
06:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [353, 0, 91, 56, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:05 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:05 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:05 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:05 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:05 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:05 INFO    opendrift.models.basemodel:2009: 2024-04-02 19:35:51.781100 - step 6 of 96 - 500 active elements (0 deactivated)
06:05 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:05 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:05 DEBUG   opendrift.models.basemodel:2028:               57.547498427933114 <- latitude  -> 57.66441148903684
06:05 DEBUG   opendrift.models.basemodel:2033:               10.496992949329483 <- longitude -> 10.69277652105553
06:05 DEBUG   opendrift.models.basemodel:2038:               -21.12503450449485   <- z ->   0.0
06:05 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:05 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 19:00:00 (before)
                2024-04-02 20:00:00 (after)
06:05 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 19:00:00) in space  (linearNDFast)
06:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:05 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 20:00:00) in space  (linearNDFast)
06:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:05 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 19:00:00, weight 0.40) and
                      after (2024-04-02 20:00:00, weight 0.60) in time
06:05 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.503018136731995 and -59.30723453678719 degrees.
06:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.503018136731995 and -59.30723453678719 degrees.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:05 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:05 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:05 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:05 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.133982 (min) 0.0428083 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.116315 (min) 0.224745 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -2.44106 (min) -1.07229 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.74253 (min) -4.10516 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.10751 (min) 22.5772 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.0942 (min) 5.62301 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0854 (min) 30.9389 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.80611e-05 (min) 0.000206641 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:05 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:05 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:05 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
06:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 113.   0.]
 [  0.   0.   0.   0.   0.]
 [  2.   0.   0.  22.   0.]
 [  0.   0.  64.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:05 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:05 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.028073520376000107
06:05 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:05 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:05 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:05 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:05 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:05 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
06:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
06:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [338, 0, 95, 67, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:05 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:05 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:05 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:05 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:05 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:05 INFO    opendrift.models.basemodel:2009: 2024-04-02 20:05:51.781100 - step 7 of 96 - 500 active elements (0 deactivated)
06:05 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:05 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:05 DEBUG   opendrift.models.basemodel:2028:               57.547257550197955 <- latitude  -> 57.668043841206085
06:05 DEBUG   opendrift.models.basemodel:2033:               10.495330842961 <- longitude -> 10.689337417266772
06:05 DEBUG   opendrift.models.basemodel:2038:               -21.068518102843846   <- z ->   0.0
06:05 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:05 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 20:00:00 (before)
                2024-04-02 21:00:00 (after)
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:07 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 31x26x7) for time after (2024-04-02 21:00:00)
06:07 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 20:00:00) in space  (linearNDFast)
06:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:07 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 21:00:00) in space  (linearNDFast)
06:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:07 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 20:00:00, weight 0.90) and
                      after (2024-04-02 21:00:00, weight 0.10) in time
06:07 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31067365336199 degrees.
06:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31067365336199 degrees.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:07 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:07 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:07 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:07 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:07 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:07 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:07 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.127885 (min) 0.0426679 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.119926 (min) 0.20616 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -1.372 (min) 0.2239 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.70942 (min) -3.70867 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.02403 (min) 22.3227 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10521 (min) 5.64905 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0951 (min) 31.0022 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.79301e-05 (min) 0.000207221 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:07 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 7 elements to seafloor.
06:07 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:07 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 26
06:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 138.   0.]
 [  0.   0.   0.   0.   0.]
 [  3.   0.   0.  27.   0.]
 [  0.   0.  73.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:07 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:07 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.024919808436714236
06:07 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:07 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:07 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:07 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
06:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
06:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [314, 0, 101, 85, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:07 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:07 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:07 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:07 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:07 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:07 INFO    opendrift.models.basemodel:2009: 2024-04-02 20:35:51.781100 - step 8 of 96 - 500 active elements (0 deactivated)
06:07 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:07 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:07 DEBUG   opendrift.models.basemodel:2028:               57.547257550197955 <- latitude  -> 57.669166060507564
06:07 DEBUG   opendrift.models.basemodel:2033:               10.495330842961 <- longitude -> 10.685636608969858
06:07 DEBUG   opendrift.models.basemodel:2038:               -20.339354610379868   <- z ->   0.0
06:07 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:07 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 20:00:00 (before)
                2024-04-02 21:00:00 (after)
06:07 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 20:00:00) in space  (linearNDFast)
06:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:07 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 21:00:00) in space  (linearNDFast)
06:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:07 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 20:00:00, weight 0.40) and
                      after (2024-04-02 21:00:00, weight 0.60) in time
06:07 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31437445007506 degrees.
06:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31437445007506 degrees.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:07 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:07 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:07 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:07 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:07 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:07 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:07 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:07 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:07 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:07 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:07 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.120659 (min) 0.0125513 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.117457 (min) 0.210938 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -1.99504 (min) 1.18402 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.96655 (min) -3.20312 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.02403 (min) 22.0616 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10916 (min) 5.65701 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.0924 (min) 31.0467 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.5586e-05 (min) 0.00018322 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:07 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:07 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:07 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:07 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:07 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
06:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0]
06:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3]
06:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 149.   0.]
 [  0.   0.   0.   0.   0.]
 [  3.   0.   0.  32.   0.]
 [  0.   0.  85.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:07 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:07 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.028440165465785042
06:07 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:07 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:07 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:07 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:07 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:07 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:07 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
06:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
06:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [303, 0, 100, 97, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:07 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:07 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:07 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:07 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:07 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:07 INFO    opendrift.models.basemodel:2009: 2024-04-02 21:05:51.781100 - step 9 of 96 - 500 active elements (0 deactivated)
06:07 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:07 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:07 DEBUG   opendrift.models.basemodel:2028:               57.547257550197955 <- latitude  -> 57.671527020909494
06:07 DEBUG   opendrift.models.basemodel:2033:               10.495330842961 <- longitude -> 10.682228206811654
06:07 DEBUG   opendrift.models.basemodel:2038:               -19.841177071930183   <- z ->   0.0
06:07 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:07 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:07 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:07 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:07 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 21:00:00 (before)
                2024-04-02 22:00:00 (after)
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:09 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:09 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 32x25x7) for time after (2024-04-02 22:00:00)
06:09 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 21:00:00) in space  (linearNDFast)
06:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:09 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 22:00:00) in space  (linearNDFast)
06:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:09 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 21:00:00, weight 0.90) and
                      after (2024-04-02 22:00:00, weight 0.10) in time
06:09 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.317782858056795 degrees.
06:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.317782858056795 degrees.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:09 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:09 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:09 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:09 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:09 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:09 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:09 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.11521 (min) 0.0227559 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.120982 (min) 0.202317 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -2.68916 (min) 1.72334 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.61172 (min) -2.83859 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.02403 (min) 21.8186 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.11279 (min) 5.67613 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1499 (min) 31.0835 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.35838e-05 (min) 0.000166342 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:09 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 7 elements to seafloor.
06:09 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:09 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
06:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0]
06:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 0 3 3 3]
06:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 166.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  38.   0.]
 [  0.   0.  90.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:09 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:09 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03681887002340808
06:09 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:09 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:09 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:09 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
06:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
06:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [288, 0, 93, 119, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:09 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:09 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:09 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:09 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:09 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:09 INFO    opendrift.models.basemodel:2009: 2024-04-02 21:35:51.781100 - step 10 of 96 - 500 active elements (0 deactivated)
06:09 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:09 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:09 DEBUG   opendrift.models.basemodel:2028:               57.54725755019795 <- latitude  -> 57.67210318800265
06:09 DEBUG   opendrift.models.basemodel:2033:               10.495330842961005 <- longitude -> 10.681468085848298
06:09 DEBUG   opendrift.models.basemodel:2038:               -20.29439982478182   <- z ->   0.0
06:09 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:09 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 21:00:00 (before)
                2024-04-02 22:00:00 (after)
06:09 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 21:00:00) in space  (linearNDFast)
06:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:09 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 22:00:00) in space  (linearNDFast)
06:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:09 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 21:00:00, weight 0.40) and
                      after (2024-04-02 22:00:00, weight 0.60) in time
06:09 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.318542972072706 degrees.
06:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.318542972072706 degrees.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:09 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:09 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:09 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:09 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:09 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:09 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:09 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:09 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:09 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:09 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:09 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.104606 (min) 0.0203526 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.122669 (min) 0.202975 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -2.90265 (min) -0.565678 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.92498 (min) -4.94055 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.762 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10575 (min) 5.67528 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1111 (min) 31.1093 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 1.01188e-05 (min) 0.000149182 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:09 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:09 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:09 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 21
06:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 187.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  46.   0.]
 [  0.   0.  93.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:09 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:09 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0407458581058168
06:09 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:09 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:09 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:09 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:09 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:09 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
06:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
06:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [267, 0, 89, 144, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:09 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:09 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:09 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:09 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:09 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:09 INFO    opendrift.models.basemodel:2009: 2024-04-02 22:05:51.781100 - step 11 of 96 - 500 active elements (0 deactivated)
06:09 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:09 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:09 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.675383687344635
06:09 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.679362035772215
06:09 DEBUG   opendrift.models.basemodel:2038:               -20.24262809753418   <- z ->   -0.14129590153659943
06:09 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:09 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:09 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:09 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:09 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 22:00:00 (before)
                2024-04-02 23:00:00 (after)
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:12 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:12 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 32x25x7) for time after (2024-04-02 23:00:00)
06:12 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 22:00:00) in space  (linearNDFast)
06:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:12 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 23:00:00) in space  (linearNDFast)
06:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:12 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 22:00:00, weight 0.90) and
                      after (2024-04-02 23:00:00, weight 0.10) in time
06:12 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32064903468621 degrees.
06:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32064903468621 degrees.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:12 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:12 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0927962 (min) 0.0188553 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.135518 (min) 0.202378 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -3.14017 (min) -2.34882 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.24291 (min) -6.08206 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.6111 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.10625 (min) 5.67465 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1871 (min) 31.1175 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 6.69293e-06 (min) 0.000133205 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:12 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 12 elements to seafloor.
06:12 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:12 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
06:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 205.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  54.   0.]
 [  0.   0.  97.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:12 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:12 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0445949078047366
06:12 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:12 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:12 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [249, 0, 86, 165, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:12 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:12 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:12 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:12 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:12 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:12 INFO    opendrift.models.basemodel:2009: 2024-04-02 22:35:51.781100 - step 12 of 96 - 500 active elements (0 deactivated)
06:12 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:12 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:12 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.678654536877524
06:12 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.677786481522832
06:12 DEBUG   opendrift.models.basemodel:2038:               -20.24262809753418   <- z ->   -0.042919133600015424
06:12 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:12 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 22:00:00 (before)
                2024-04-02 23:00:00 (after)
06:12 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 22:00:00) in space  (linearNDFast)
06:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:12 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-02 23:00:00) in space  (linearNDFast)
06:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:12 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 22:00:00, weight 0.40) and
                      after (2024-04-02 23:00:00, weight 0.60) in time
06:12 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.322224575735255 degrees.
06:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.322224575735255 degrees.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:12 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:12 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:12 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:12 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.100114 (min) 0.0351768 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.139181 (min) 0.194478 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -3.41395 (min) -2.62044 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.26448 (min) -6.14149 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.5656 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.09169 (min) 5.66987 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1768 (min) 31.1176 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: 4.01264e-07 (min) 0.000103653 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:12 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:12 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:12 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
06:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 219.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  59.   0.]
 [  0.   0.  99.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:12 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:12 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04614375841892448
06:12 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:12 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:12 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:12 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
06:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
06:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [235, 0, 85, 180, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:12 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:12 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:12 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:12 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:12 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:12 INFO    opendrift.models.basemodel:2009: 2024-04-02 23:05:51.781100 - step 13 of 96 - 500 active elements (0 deactivated)
06:12 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:12 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:12 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.68157584865992
06:12 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.675361372696921
06:12 DEBUG   opendrift.models.basemodel:2038:               -20.24262809753418   <- z ->   -0.04431567883138987
06:12 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:12 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 23:00:00 (before)
                2024-04-03 00:00:00 (after)
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:14 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:14 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 33x25x7) for time after (2024-04-03 00:00:00)
06:14 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 23:00:00) in space  (linearNDFast)
06:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:14 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 00:00:00) in space  (linearNDFast)
06:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:14 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 23:00:00, weight 0.90) and
                      after (2024-04-03 00:00:00, weight 0.10) in time
06:14 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.324649694179286 degrees.
06:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.324649694179286 degrees.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:14 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:14 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.118774 (min) 0.0523178 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.159223 (min) 0.196797 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -3.66846 (min) -2.90357 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.26339 (min) -6.24463 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.5125 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.08166 (min) 5.66487 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1623 (min) 31.1275 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -3.16412e-05 (min) 7.35862e-05 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:14 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:14 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:14 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 20
06:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
06:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
06:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 239.   0.]
 [  0.   0.   0.   0.   0.]
 [  5.   0.   0.  64.   0.]
 [  0.   0. 103.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:14 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:14 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04738363749979938
06:14 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:14 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:14 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [215, 0, 83, 202, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:14 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:14 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:14 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:14 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:14 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:14 INFO    opendrift.models.basemodel:2009: 2024-04-02 23:35:51.781100 - step 14 of 96 - 500 active elements (0 deactivated)
06:14 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:14 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:14 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.68099434292223
06:14 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.672596373852347
06:14 DEBUG   opendrift.models.basemodel:2038:               -20.59419314891504   <- z ->   -0.09163392866066711
06:14 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:14 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-02 23:00:00 (before)
                2024-04-03 00:00:00 (after)
06:14 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-02 23:00:00) in space  (linearNDFast)
06:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:14 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 00:00:00) in space  (linearNDFast)
06:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:14 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-02 23:00:00, weight 0.40) and
                      after (2024-04-03 00:00:00, weight 0.60) in time
06:14 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32741467980226 degrees.
06:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32741467980226 degrees.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:14 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:14 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:14 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:14 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.143953 (min) 0.0805702 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.14925 (min) 0.206993 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -3.85484 (min) -3.2383 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.1168 (min) -6.47192 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.4095 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.06919 (min) 5.65898 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1546 (min) 31.1058 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -6.1397e-05 (min) 8.00443e-05 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:14 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:14 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:14 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:14 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:14 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
06:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 2 0 0 0]
06:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 0 3 3 3]
06:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 251.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.  68.   0.]
 [  0.   0. 105.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:14 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:14 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.047129412773551226
06:14 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:14 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:14 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:14 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
06:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
06:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [204, 0, 87, 209, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:14 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:14 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:14 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:14 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:14 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:14 INFO    opendrift.models.basemodel:2009: 2024-04-03 00:05:51.781100 - step 15 of 96 - 500 active elements (0 deactivated)
06:14 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:14 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:14 DEBUG   opendrift.models.basemodel:2028:               57.54627044063443 <- latitude  -> 57.682274148492496
06:14 DEBUG   opendrift.models.basemodel:2033:               10.495330842961005 <- longitude -> 10.672207944522764
06:14 DEBUG   opendrift.models.basemodel:2038:               -20.324504852294922   <- z ->   -0.10258680162214526
06:14 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:14 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 00:00:00 (before)
                2024-04-03 01:00:00 (after)
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:16 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:16 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 33x25x7) for time after (2024-04-03 01:00:00)
06:16 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 00:00:00) in space  (linearNDFast)
06:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:16 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 01:00:00) in space  (linearNDFast)
06:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:16 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 00:00:00, weight 0.90) and
                      after (2024-04-03 01:00:00, weight 0.10) in time
06:16 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.327803118287925 degrees.
06:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.327803118287925 degrees.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:16 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:16 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.160666 (min) 0.110257 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.130358 (min) 0.224496 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.06033 (min) -3.34283 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -7.00674 (min) -6.37868 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.3033 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.05975 (min) 5.65144 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.1838 (min) 31.2117 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -9.66526e-05 (min) 6.77088e-05 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:16 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 8 elements to seafloor.
06:16 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:16 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
06:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0]
06:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 0 3 3 3 3 3 3 3]
06:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 266.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  71.   0.]
 [  0.   0. 113.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:16 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:16 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.047010602281634534
06:16 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:16 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:16 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
06:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
06:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [191, 0, 98, 211, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:16 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:16 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:16 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:16 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:16 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:16 INFO    opendrift.models.basemodel:2009: 2024-04-03 00:35:51.781100 - step 16 of 96 - 500 active elements (0 deactivated)
06:16 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:16 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:16 DEBUG   opendrift.models.basemodel:2028:               57.54594584357494 <- latitude  -> 57.685454891382676
06:16 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.672475659560607
06:16 DEBUG   opendrift.models.basemodel:2038:               -20.324504852294922   <- z ->   -0.08564901852454276
06:16 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:16 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 00:00:00 (before)
                2024-04-03 01:00:00 (after)
06:16 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 00:00:00) in space  (linearNDFast)
06:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:16 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 01:00:00) in space  (linearNDFast)
06:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:16 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 00:00:00, weight 0.40) and
                      after (2024-04-03 01:00:00, weight 0.60) in time
06:16 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.327535396760915 degrees.
06:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.327535396760915 degrees.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:16 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:16 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:16 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:16 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.170352 (min) 0.137337 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0939083 (min) 0.250748 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.3438 (min) -3.84916 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.83806 (min) -6.35535 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.2186 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.05588 (min) 5.63712 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2129 (min) 31.0736 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000127903 (min) 5.86013e-05 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:16 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:16 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:16 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:16 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
06:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0]
06:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 3]
06:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 284.   0.]
 [  0.   0.   0.   0.   0.]
 [  9.   0.   0.  78.   0.]
 [  0.   0. 133.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:16 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:16 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0470548883426277
06:16 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:16 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:16 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 33
06:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 33 elements
06:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [174, 0, 122, 204, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:16 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:16 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:16 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:16 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:16 INFO    opendrift.models.basemodel:2009: 2024-04-03 01:05:51.781100 - step 17 of 96 - 500 active elements (0 deactivated)
06:16 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:16 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:16 DEBUG   opendrift.models.basemodel:2028:               57.54442804664492 <- latitude  -> 57.687631516640124
06:16 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.667632700406829
06:16 DEBUG   opendrift.models.basemodel:2038:               -20.324504852294922   <- z ->   -0.3147210606561701
06:16 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:16 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 01:00:00 (before)
                2024-04-03 02:00:00 (after)
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:19 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:19 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 34x25x7) for time after (2024-04-03 02:00:00)
06:19 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 01:00:00) in space  (linearNDFast)
06:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:19 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 02:00:00) in space  (linearNDFast)
06:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:19 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 01:00:00, weight 0.90) and
                      after (2024-04-03 02:00:00, weight 0.10) in time
06:19 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.33237836438849 degrees.
06:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.33237836438849 degrees.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:19 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:19 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:19 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:19 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:19 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:19 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:19 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.165623 (min) 0.156878 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0567988 (min) 0.251384 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.59592 (min) -4.11635 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.6385 (min) -6.23894 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.0011 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.04232 (min) 5.62257 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2445 (min) 31.0536 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000152673 (min) 5.58688e-05 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:19 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 12 elements to seafloor.
06:19 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:19 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
06:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0]
06:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3 3]
06:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 301.   0.]
 [  0.   0.   0.   0.   0.]
 [ 10.   0.   0.  86.   0.]
 [  0.   0. 166.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:19 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:19 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0467757068111212
06:19 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:19 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:19 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:19 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 87
06:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 87 elements
06:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [158, 0, 197, 145, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:19 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:19 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:19 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
06:19 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:19 INFO    opendrift.models.basemodel:2009: 2024-04-03 01:35:51.781100 - step 18 of 96 - 500 active elements (0 deactivated)
06:19 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:19 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:19 DEBUG   opendrift.models.basemodel:2028:               57.54442189478032 <- latitude  -> 57.6910597521604
06:19 DEBUG   opendrift.models.basemodel:2033:               10.495330842961003 <- longitude -> 10.669080180633184
06:19 DEBUG   opendrift.models.basemodel:2038:               -20.324504852294922   <- z ->   -0.3414752951176019
06:19 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:19 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 01:00:00 (before)
                2024-04-03 02:00:00 (after)
06:19 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 01:00:00) in space  (linearNDFast)
06:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:19 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 02:00:00) in space  (linearNDFast)
06:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:19 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 01:00:00, weight 0.40) and
                      after (2024-04-03 02:00:00, weight 0.60) in time
06:19 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.33093086971661 degrees.
06:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.33093086971661 degrees.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:19 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:19 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:19 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:19 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:19 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:19 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:19 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:19 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:19 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:19 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:19 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.179034 (min) 0.153307 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.040532 (min) 0.266226 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.73954 (min) -4.16174 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.31692 (min) -5.77023 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.9547 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.03603 (min) 5.60715 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2537 (min) 31.063 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000150451 (min) 1.33334e-05 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:19 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:19 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
06:19 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:19 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
06:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 2 0 0 2 0 0]
06:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 0 3 3 0 3 3]
06:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 311.   0.]
 [  0.   0.   0.   0.   0.]
 [ 13.   0.   0.  97.   0.]
 [  0.   0. 253.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:19 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:19 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.045071438389452365
06:19 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:19 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:19 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:19 DEBUG   opendrift.models.oceandrift:624: 56 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:19 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 38
06:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 38 elements
06:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [151, 0, 213, 136, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:19 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:19 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:19 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:19 DEBUG   opendrift.models.basemodel:728: Lifting 8 elements to seafloor.
06:19 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:19 INFO    opendrift.models.basemodel:2009: 2024-04-03 02:05:51.781100 - step 19 of 96 - 500 active elements (0 deactivated)
06:19 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:19 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:19 DEBUG   opendrift.models.basemodel:2028:               57.54444515408023 <- latitude  -> 57.695074330778866
06:19 DEBUG   opendrift.models.basemodel:2033:               10.495330842961003 <- longitude -> 10.670952737312646
06:19 DEBUG   opendrift.models.basemodel:2038:               -20.324504852294922   <- z ->   -0.1337173888958043
06:19 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:19 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:19 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:19 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:19 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 02:00:00 (before)
                2024-04-03 03:00:00 (after)
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:22 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:22 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 35x25x7) for time after (2024-04-03 03:00:00)
06:22 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 02:00:00) in space  (linearNDFast)
06:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:22 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 03:00:00) in space  (linearNDFast)
06:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:22 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 02:00:00, weight 0.90) and
                      after (2024-04-03 03:00:00, weight 0.10) in time
06:22 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32905832530169 degrees.
06:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32905832530169 degrees.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:22 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:22 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.162338 (min) 0.181359 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0241999 (min) 0.289511 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.82057 (min) -4.14071 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.11577 (min) -5.3904 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.9249 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.02575 (min) 5.58977 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.247 (min) 31.0984 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000193583 (min) -1.19484e-06 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:22 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 8 elements to seafloor.
06:22 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:22 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
06:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0]
06:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0 3 3]
06:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 329.   0.]
 [  0.   0.   0.   0.   0.]
 [ 14.   0.   0. 116.   0.]
 [  0.   0. 291.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:22 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:22 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.043500931947926154
06:22 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:22 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:22 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:22 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 59
06:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 59 elements
06:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [134, 0, 257, 109, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:22 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:22 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:22 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
06:22 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:22 INFO    opendrift.models.basemodel:2009: 2024-04-03 02:35:51.781100 - step 20 of 96 - 500 active elements (0 deactivated)
06:22 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:22 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:22 DEBUG   opendrift.models.basemodel:2028:               57.54445665842784 <- latitude  -> 57.69960709010407
06:22 DEBUG   opendrift.models.basemodel:2033:               10.495330842961007 <- longitude -> 10.67462661276631
06:22 DEBUG   opendrift.models.basemodel:2038:               -20.120338439941406   <- z ->   -0.09474797424315562
06:22 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:22 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 02:00:00 (before)
                2024-04-03 03:00:00 (after)
06:22 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 02:00:00) in space  (linearNDFast)
06:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:22 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 03:00:00) in space  (linearNDFast)
06:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:22 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 02:00:00, weight 0.40) and
                      after (2024-04-03 03:00:00, weight 0.60) in time
06:22 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32538443932626 degrees.
06:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32538443932626 degrees.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:22 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:22 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:22 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:22 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.158686 (min) 0.206896 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.00759894 (min) 0.312716 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.50336 (min) -3.88166 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.06212 (min) -5.39729 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.9137 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00761 (min) 5.56877 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2302 (min) 31.0855 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000174642 (min) 7.62716e-06 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:22 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:22 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
06:22 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:22 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
06:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0 2 0 2 0 0 0 0 2 0 0 0 2 0]
06:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 0 3 0 3 3 3 3 0 3 3 3 0 3]
06:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 341.   0.]
 [  0.   0.   0.   0.   0.]
 [ 20.   0.   0. 130.   0.]
 [  0.   0. 350.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:22 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:22 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04099548970663829
06:22 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:22 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:22 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:22 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:22 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 26
06:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 26 elements
06:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [128, 0, 259, 113, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:22 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:22 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:22 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:22 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:22 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:22 INFO    opendrift.models.basemodel:2009: 2024-04-03 03:05:51.781100 - step 21 of 96 - 500 active elements (0 deactivated)
06:22 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:22 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:22 DEBUG   opendrift.models.basemodel:2028:               57.54509236683461 <- latitude  -> 57.703450997046446
06:22 DEBUG   opendrift.models.basemodel:2033:               10.495330842961007 <- longitude -> 10.67887896271134
06:22 DEBUG   opendrift.models.basemodel:2038:               -20.120338439941406   <- z ->   -0.11331607292254131
06:22 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:22 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 03:00:00 (before)
                2024-04-03 04:00:00 (after)
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:24 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:24 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 36x25x7) for time after (2024-04-03 04:00:00)
06:24 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 03:00:00) in space  (linearNDFast)
06:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:24 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 04:00:00) in space  (linearNDFast)
06:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:24 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 03:00:00, weight 0.90) and
                      after (2024-04-03 04:00:00, weight 0.10) in time
06:24 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32113207900454 degrees.
06:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.32113207900454 degrees.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:24 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:24 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:24 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:24 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:24 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:24 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:24 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:24 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:24 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:24 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:24 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.152544 (min) 0.248077 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.00775714 (min) 0.32517 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.24635 (min) -3.65789 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.01972 (min) -5.39714 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.9098 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.99435 (min) 5.55249 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2387 (min) 31.0142 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000177568 (min) 5.04428e-05 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:24 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 9 elements to seafloor.
06:24 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:24 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
06:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0 2 0 0 0]
06:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3 0 3 3 3]
06:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 351.   0.]
 [  0.   0.   0.   0.   0.]
 [ 22.   0.   0. 148.   0.]
 [  0.   0. 376.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:24 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:24 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03901414037577569
06:24 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:24 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:24 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 38
06:24 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 38 elements
06:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:24 INFO    opendrift.models.chemicaldrift:1861: partitioning: [120, 0, 271, 109, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:24 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:24 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:24 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
06:24 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:24 INFO    opendrift.models.basemodel:2009: 2024-04-03 03:35:51.781100 - step 22 of 96 - 500 active elements (0 deactivated)
06:24 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:24 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:24 DEBUG   opendrift.models.basemodel:2028:               57.54605943068385 <- latitude  -> 57.70856473302633
06:24 DEBUG   opendrift.models.basemodel:2033:               10.495330842961003 <- longitude -> 10.683482346018023
06:24 DEBUG   opendrift.models.basemodel:2038:               -19.900077794660866   <- z ->   -0.20609023088397233
06:24 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:24 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:24 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:24 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 03:00:00 (before)
                2024-04-03 04:00:00 (after)
06:24 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 03:00:00) in space  (linearNDFast)
06:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:24 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 04:00:00) in space  (linearNDFast)
06:24 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:24 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 03:00:00, weight 0.40) and
                      after (2024-04-03 04:00:00, weight 0.60) in time
06:24 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31652869388757 degrees.
06:24 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31652869388757 degrees.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:24 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:24 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:24 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:24 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:24 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:24 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:24 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:24 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:24 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:24 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:24 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:24 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:24 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:24 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:24 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:24 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:24 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:24 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.124098 (min) 0.299292 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.0179883 (min) 0.341545 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.22451 (min) -3.55737 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.94429 (min) -5.38229 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.9329 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9838 (min) 5.53682 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2329 (min) 31.0649 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000161839 (min) 6.77997e-05 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:24 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:24 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:24 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:24 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:24 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:24 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:24 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
06:24 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 2 2 3 0 0 0 0 0 0 0]
06:24 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 0 0 0 3 3 3 3 3 3 3]
06:24 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 360.   0.]
 [  0.   0.   0.   0.   0.]
 [ 26.   0.   0. 172.   0.]
 [  1.   0. 414.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:24 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:24 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:24 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:24 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:24 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.038051822346337465
06:24 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:24 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:24 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 5 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:24 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:24 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:24 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
06:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
06:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [116, 0, 270, 114, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:25 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:25 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:25 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:25 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:25 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:25 INFO    opendrift.models.basemodel:2009: 2024-04-03 04:05:51.781100 - step 23 of 96 - 500 active elements (0 deactivated)
06:25 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:25 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:25 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.71367575676104
06:25 DEBUG   opendrift.models.basemodel:2033:               10.495330842961003 <- longitude -> 10.686226374829461
06:25 DEBUG   opendrift.models.basemodel:2038:               -19.52806854248047   <- z ->   -0.16771951629692627
06:25 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:25 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 04:00:00 (before)
                2024-04-03 05:00:00 (after)
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:26 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:26 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 38x25x7) for time after (2024-04-03 05:00:00)
06:26 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 04:00:00) in space  (linearNDFast)
06:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:26 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 05:00:00) in space  (linearNDFast)
06:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:26 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 04:00:00, weight 0.90) and
                      after (2024-04-03 05:00:00, weight 0.10) in time
06:26 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31378466064151 degrees.
06:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.31378466064151 degrees.
06:26 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:26 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:26 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:26 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:26 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:26 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:26 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:26 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:26 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:26 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:26 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:26 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:26 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:26 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:26 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:26 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:26 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:26 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:26 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.105361 (min) 0.288323 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.026214 (min) 0.343897 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.31021 (min) -3.64413 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.95259 (min) -5.4413 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.8193 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96575 (min) 5.5262 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.242 (min) 31.1073 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.0001933 (min) 8.94656e-05 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:26 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:26 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:26 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:26 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
06:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 3 0 2 0 0 0]
06:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 0 3 0 3 3 3]
06:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 369.   0.]
 [  0.   0.   0.   0.   0.]
 [ 28.   0.   0. 189.   0.]
 [  2.   0. 434.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:26 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:26 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.038700307402253255
06:26 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:26 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:26 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:26 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:26 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
06:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
06:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [110, 0, 275, 115, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:26 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:26 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:26 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:26 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:26 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:26 INFO    opendrift.models.basemodel:2009: 2024-04-03 04:35:51.781100 - step 24 of 96 - 500 active elements (0 deactivated)
06:26 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:26 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:26 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.71905486091722
06:26 DEBUG   opendrift.models.basemodel:2033:               10.495330842961003 <- longitude -> 10.691468975411395
06:26 DEBUG   opendrift.models.basemodel:2038:               -20.13092041015625   <- z ->   0.0
06:26 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:26 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:26 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:26 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:26 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 04:00:00 (before)
                2024-04-03 05:00:00 (after)
06:26 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 04:00:00) in space  (linearNDFast)
06:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:27 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 05:00:00) in space  (linearNDFast)
06:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:27 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 04:00:00, weight 0.40) and
                      after (2024-04-03 05:00:00, weight 0.60) in time
06:27 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.30854206938645 degrees.
06:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.30854206938645 degrees.
06:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:27 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:27 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:27 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:27 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0904024 (min) 0.244801 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.0261833 (min) 0.391837 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -4.94851 (min) -4.47366 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.30757 (min) -5.84441 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 20.95 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.95291 (min) 5.51738 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2703 (min) 31.081 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.00027574 (min) 9.95914e-05 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:27 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:27 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:27 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:27 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
06:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0 0 0 0 2 0]
06:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 3 3 3 0 3]
06:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 379.   0.]
 [  0.   0.   0.   0.   0.]
 [ 30.   0.   0. 201.   0.]
 [  2.   0. 453.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:27 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:27 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04529971425183734
06:27 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:27 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:27 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:27 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
06:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
06:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [102, 0, 279, 119, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:27 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:27 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:27 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:27 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:27 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:27 INFO    opendrift.models.basemodel:2009: 2024-04-03 05:05:51.781100 - step 25 of 96 - 500 active elements (0 deactivated)
06:27 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:27 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:27 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.72435738649152
06:27 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.697127201937787
06:27 DEBUG   opendrift.models.basemodel:2038:               -20.364511739655182   <- z ->   -0.1707890421740793
06:27 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:27 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 05:00:00 (before)
                2024-04-03 06:00:00 (after)
06:28 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:28 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:28 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:28 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:28 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:29 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:29 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 39x26x7) for time after (2024-04-03 06:00:00)
06:29 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 05:00:00) in space  (linearNDFast)
06:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:29 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 06:00:00) in space  (linearNDFast)
06:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:29 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 05:00:00, weight 0.90) and
                      after (2024-04-03 06:00:00, weight 0.10) in time
06:29 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.302883823641324 degrees.
06:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.302883823641324 degrees.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:29 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:29 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:29 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0789287 (min) 0.27534 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.0251881 (min) 0.344753 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -5.7044 (min) -5.18381 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.5299 (min) -6.02166 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.1473 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.94069 (min) 5.51193 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2582 (min) 31.0746 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000372697 (min) 0.00010343 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:29 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:29 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:29 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
06:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0 0 0 0]
06:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 3 3 3]
06:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 388.   0.]
 [  0.   0.   0.   0.   0.]
 [ 31.   0.   0. 218.   0.]
 [  2.   0. 476.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:29 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:29 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.053929529672044944
06:29 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:29 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:29 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:29 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
06:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
06:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [94, 0, 278, 128, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:29 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:29 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:29 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:29 INFO    opendrift.models.basemodel:2009: 2024-04-03 05:35:51.781100 - step 26 of 96 - 500 active elements (0 deactivated)
06:29 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:29 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:29 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.72985047197709
06:29 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.703271828732642
06:29 DEBUG   opendrift.models.basemodel:2038:               -20.92840212800245   <- z ->   -0.5004249826966677
06:29 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:29 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 05:00:00 (before)
                2024-04-03 06:00:00 (after)
06:29 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 05:00:00) in space  (linearNDFast)
06:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:29 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 06:00:00) in space  (linearNDFast)
06:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:29 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 05:00:00, weight 0.40) and
                      after (2024-04-03 06:00:00, weight 0.60) in time
06:29 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.296739207042855 degrees.
06:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.296739207042855 degrees.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:29 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:29 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:29 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:29 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0717601 (min) 0.26322 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.0196804 (min) 0.350018 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -5.98713 (min) -5.50434 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -6.01153 (min) -5.72788 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.3881 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9333 (min) 5.50766 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2683 (min) 31.1051 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000288124 (min) 9.46353e-05 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:29 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:29 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:29 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
06:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 0 2 2 0 0 0 0 0 0 0]
06:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 3 0 0 3 3 3 3 3 3 3]
06:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 399.   0.]
 [  0.   0.   0.   0.   0.]
 [ 35.   0.   0. 238.   0.]
 [  2.   0. 496.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:29 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:29 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.051807375097991146
06:29 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:29 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:29 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
06:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
06:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [87, 0, 274, 139, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:29 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:29 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:29 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:29 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:29 INFO    opendrift.models.basemodel:2009: 2024-04-03 06:05:51.781100 - step 27 of 96 - 500 active elements (0 deactivated)
06:29 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:29 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:29 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.735309645335946
06:29 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.709894479939189
06:29 DEBUG   opendrift.models.basemodel:2038:               -19.607043545912255   <- z ->   -0.010933533275083729
06:29 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:29 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 06:00:00 (before)
                2024-04-03 07:00:00 (after)
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:31 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:31 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 41x26x7) for time after (2024-04-03 07:00:00)
06:31 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 06:00:00) in space  (linearNDFast)
06:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:31 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 07:00:00) in space  (linearNDFast)
06:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:31 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 06:00:00, weight 0.90) and
                      after (2024-04-03 07:00:00, weight 0.10) in time
06:31 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29011654840564 degrees.
06:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29011654840564 degrees.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:31 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:31 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0752835 (min) 0.273376 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: 0.0110412 (min) 0.318698 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.44316 (min) -5.96857 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.66755 (min) -5.39041 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 21.7399 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.92112 (min) 5.50422 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2767 (min) 31.0796 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000229933 (min) 0.000188279 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:31 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:31 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:31 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
06:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 2]
06:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 0]
06:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 404.   0.]
 [  0.   0.   0.   0.   0.]
 [ 37.   0.   0. 261.   0.]
 [  2.   0. 519.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:31 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:31 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.05321438604489096
06:31 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:31 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:31 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:31 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
06:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
06:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [84, 0, 267, 149, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:31 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:31 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:31 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:31 INFO    opendrift.models.basemodel:2009: 2024-04-03 06:35:51.781100 - step 28 of 96 - 500 active elements (0 deactivated)
06:31 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:31 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:31 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.737293943852364
06:31 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.713656588024486
06:31 DEBUG   opendrift.models.basemodel:2038:               -20.95207405090332   <- z ->   -0.036613785128006844
06:31 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:31 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 06:00:00 (before)
                2024-04-03 07:00:00 (after)
06:31 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 06:00:00) in space  (linearNDFast)
06:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:31 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 07:00:00) in space  (linearNDFast)
06:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:31 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 06:00:00, weight 0.40) and
                      after (2024-04-03 07:00:00, weight 0.60) in time
06:31 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28635443328513 degrees.
06:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28635443328513 degrees.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:31 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:31 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:31 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:31 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.079492 (min) 0.230568 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.00309586 (min) 0.262233 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -7.51829 (min) -7.09047 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.79683 (min) -5.16098 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 22.2132 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91311 (min) 5.50422 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3029 (min) 31.0802 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000138076 (min) 0.000230845 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:31 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:31 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:31 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
06:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
06:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
06:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 406.   0.]
 [  0.   0.   0.   0.   0.]
 [ 38.   0.   0. 280.   0.]
 [  2.   0. 533.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:31 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:31 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.06513228615370371
06:31 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:31 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:31 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:31 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:31 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
06:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
06:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [83, 0, 258, 159, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:31 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:31 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:31 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:31 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:31 INFO    opendrift.models.basemodel:2009: 2024-04-03 07:05:51.781100 - step 29 of 96 - 500 active elements (0 deactivated)
06:31 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:31 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:31 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.73836427510352
06:31 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.720619971858778
06:31 DEBUG   opendrift.models.basemodel:2038:               -20.56461329610789   <- z ->   -0.032843680813588884
06:31 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:31 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 07:00:00 (before)
                2024-04-03 08:00:00 (after)
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:33 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:33 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 42x26x7) for time after (2024-04-03 08:00:00)
06:33 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 07:00:00) in space  (linearNDFast)
06:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:33 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 08:00:00) in space  (linearNDFast)
06:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:33 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 07:00:00, weight 0.90) and
                      after (2024-04-03 08:00:00, weight 0.10) in time
06:33 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27939105891199 degrees.
06:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27939105891199 degrees.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:33 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:33 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.0858406 (min) 0.228739 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0175951 (min) 0.217792 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -8.26178 (min) -7.6661 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -5.74408 (min) -4.83169 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 23.4921 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91557 (min) 5.50409 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3003 (min) 31.0557 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000102723 (min) 0.000452308 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:33 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 7 elements to seafloor.
06:33 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:33 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
06:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0]
06:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3]
06:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 413.   0.]
 [  0.   0.   0.   0.   0.]
 [ 39.   0.   0. 296.   0.]
 [  2.   0. 541.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:33 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:33 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.07298066301265899
06:33 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:33 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:33 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:33 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
06:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
06:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [77, 0, 244, 179, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:33 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:33 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:33 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:33 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:33 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:33 INFO    opendrift.models.basemodel:2009: 2024-04-03 07:35:51.781100 - step 30 of 96 - 500 active elements (0 deactivated)
06:33 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:33 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:33 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.740646287069005
06:33 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.724895817235023
06:33 DEBUG   opendrift.models.basemodel:2038:               -20.175254319550948   <- z ->   -0.038996727223899796
06:33 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:33 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 07:00:00 (before)
                2024-04-03 08:00:00 (after)
06:33 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 07:00:00) in space  (linearNDFast)
06:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:33 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 08:00:00) in space  (linearNDFast)
06:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:33 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 07:00:00, weight 0.40) and
                      after (2024-04-03 08:00:00, weight 0.60) in time
06:33 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27511520391293 degrees.
06:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27511520391293 degrees.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:33 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:33 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:33 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:33 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.11495 (min) 0.211429 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0614846 (min) 0.352953 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -7.73153 (min) -7.49209 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.94191 (min) -4.54453 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 24.3096 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91936 (min) 5.50342 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2944 (min) 31.0517 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -8.66061e-05 (min) 0.000389489 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:33 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:33 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:33 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
06:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 2 0 2]
06:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 0 3 0]
06:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 422.   0.]
 [  0.   0.   0.   0.   0.]
 [ 42.   0.   0. 316.   0.]
 [  2.   0. 548.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:33 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:33 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.05969594621750184
06:33 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:33 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:33 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [71, 0, 231, 198, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:33 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:33 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:33 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:33 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:33 INFO    opendrift.models.basemodel:2009: 2024-04-03 08:05:51.781100 - step 31 of 96 - 500 active elements (0 deactivated)
06:33 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:33 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:33 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.74611280921113
06:33 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.73110682408658
06:33 DEBUG   opendrift.models.basemodel:2038:               -19.52806854248047   <- z ->   -0.034394842450783836
06:33 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:33 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 08:00:00 (before)
                2024-04-03 09:00:00 (after)
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:35 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:35 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 43x26x7) for time after (2024-04-03 09:00:00)
06:35 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 08:00:00) in space  (linearNDFast)
06:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:35 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 09:00:00) in space  (linearNDFast)
06:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:35 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 08:00:00, weight 0.90) and
                      after (2024-04-03 09:00:00, weight 0.10) in time
06:35 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.268904207782555 degrees.
06:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.268904207782555 degrees.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:35 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:35 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.127091 (min) 0.181288 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0499854 (min) 0.201385 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -7.41589 (min) -6.88344 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.65357 (min) -4.12042 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 25.2868 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.93343 (min) 5.50191 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3197 (min) 31.114 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -8.58135e-05 (min) 0.000344936 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:35 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 14 elements to seafloor.
06:35 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:35 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:35 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:35 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:35 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
06:35 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 0 0 2]
06:35 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 3 3 0]
06:35 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 426.   0.]
 [  0.   0.   0.   0.   0.]
 [ 45.   0.   0. 328.   0.]
 [  2.   0. 550.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:35 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:35 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:35 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.05539361046715542
06:35 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:35 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:35 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:35 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:35 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:35 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:35 INFO    opendrift.models.chemicaldrift:1861: partitioning: [70, 0, 216, 214, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:35 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:35 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:35 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:35 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:35 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:35 INFO    opendrift.models.basemodel:2009: 2024-04-03 08:35:51.781100 - step 32 of 96 - 500 active elements (0 deactivated)
06:35 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:35 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:35 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.749267076627866
06:35 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.735122643739428
06:35 DEBUG   opendrift.models.basemodel:2038:               -20.746601104736328   <- z ->   -0.08479972170382843
06:35 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:35 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 08:00:00 (before)
                2024-04-03 09:00:00 (after)
06:35 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 08:00:00) in space  (linearNDFast)
06:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:35 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 09:00:00) in space  (linearNDFast)
06:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:35 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 08:00:00, weight 0.40) and
                      after (2024-04-03 09:00:00, weight 0.60) in time
06:35 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26488837353935 degrees.
06:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26488837353935 degrees.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:35 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:35 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:35 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:35 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.231281 (min) 0.145216 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.144048 (min) 0.255907 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.91991 (min) -6.40527 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.32242 (min) -3.76635 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 26.2886 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.94196 (min) 5.54413 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3223 (min) 31.8371 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -8.00691e-05 (min) 0.000912831 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:35 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:35 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:35 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:35 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:35 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:35 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:35 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:35 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
06:35 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 2 0 0 2]
06:35 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 0 3 3 0]
06:35 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 431.   0.]
 [  0.   0.   0.   0.   0.]
 [ 49.   0.   0. 342.   0.]
 [  2.   0. 552.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:35 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:35 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:35 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04796084614584663
06:35 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:35 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:35 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:35 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:35 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:35 INFO    opendrift.models.chemicaldrift:1861: partitioning: [69, 0, 206, 225, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:35 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:35 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:35 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:35 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:35 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:35 INFO    opendrift.models.basemodel:2009: 2024-04-03 09:05:51.781100 - step 33 of 96 - 500 active elements (0 deactivated)
06:35 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:35 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:35 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.74766252833344
06:35 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.737981802188374
06:35 DEBUG   opendrift.models.basemodel:2038:               -22.720776123753286   <- z ->   -0.3527871631947157
06:35 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:35 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 09:00:00 (before)
                2024-04-03 10:00:00 (after)
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:37 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:37 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 43x26x7) for time after (2024-04-03 10:00:00)
06:37 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 09:00:00) in space  (linearNDFast)
06:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:37 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 10:00:00) in space  (linearNDFast)
06:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:37 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 09:00:00, weight 0.90) and
                      after (2024-04-03 10:00:00, weight 0.10) in time
06:37 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26202922290009 degrees.
06:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26202922290009 degrees.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:37 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:37 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:37 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:37 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:37 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:37 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:37 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:37 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:37 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:37 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:37 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.192083 (min) 0.104477 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.222381 (min) 0.475415 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.47572 (min) -6.00807 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.01689 (min) -3.41597 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 24.8795 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.94892 (min) 5.64119 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.328 (min) 32.2528 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -9.4669e-05 (min) 0.000936601 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:37 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 10 elements to seafloor.
06:37 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:37 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
06:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 0 0 0]
06:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3]
06:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 438.   0.]
 [  0.   0.   0.   0.   0.]
 [ 50.   0.   0. 350.   0.]
 [  2.   0. 554.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:37 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:37 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04192264437769866
06:37 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:37 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:37 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:37 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
06:37 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:37 INFO    opendrift.models.chemicaldrift:1861: partitioning: [63, 0, 193, 244, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:37 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:37 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:37 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:37 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:37 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:37 INFO    opendrift.models.basemodel:2009: 2024-04-03 09:35:51.781100 - step 34 of 96 - 500 active elements (0 deactivated)
06:37 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:37 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:37 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.755345989851584
06:37 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.738999528025802
06:37 DEBUG   opendrift.models.basemodel:2038:               -20.746601104736328   <- z ->   0.0
06:37 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:37 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:37 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:37 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 09:00:00 (before)
                2024-04-03 10:00:00 (after)
06:37 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 09:00:00) in space  (linearNDFast)
06:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:37 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 10:00:00) in space  (linearNDFast)
06:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:37 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 09:00:00, weight 0.40) and
                      after (2024-04-03 10:00:00, weight 0.60) in time
06:37 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.261011492646894 degrees.
06:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.261011492646894 degrees.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:37 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:37 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:37 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:37 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:37 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:37 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:37 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:37 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:37 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:37 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:37 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:37 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:37 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:37 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:37 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:37 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.265325 (min) 0.0876048 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.23221 (min) 0.161927 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.33517 (min) -5.94419 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.8819 (min) -3.2552 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 28.0431 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.97122 (min) 5.55405 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3313 (min) 31.7447 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -8.36663e-05 (min) 0.000734665 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:37 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:37 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:37 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:37 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
06:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 0 0 2 0 2 2]
06:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 3 3 0 3 0 0]
06:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 442.   0.]
 [  0.   0.   0.   0.   0.]
 [ 56.   0.   0. 362.   0.]
 [  2.   0. 554.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:37 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:37 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03852622759553682
06:37 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:37 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:37 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:37 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:37 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:37 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:38 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
06:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 179, 256, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:38 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:38 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:38 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:38 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:38 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:38 INFO    opendrift.models.basemodel:2009: 2024-04-03 10:05:51.781100 - step 35 of 96 - 500 active elements (0 deactivated)
06:38 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:38 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:38 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.757219612473094
06:38 DEBUG   opendrift.models.basemodel:2033:               10.49533084296101 <- longitude -> 10.738108016645919
06:38 DEBUG   opendrift.models.basemodel:2038:               -20.746601104736328   <- z ->   0.0
06:38 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:38 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 10:00:00 (before)
                2024-04-03 11:00:00 (after)
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:39 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:39 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 43x26x7) for time after (2024-04-03 11:00:00)
06:39 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 10:00:00) in space  (linearNDFast)
06:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:39 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 11:00:00) in space  (linearNDFast)
06:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:39 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 10:00:00, weight 0.90) and
                      after (2024-04-03 11:00:00, weight 0.10) in time
06:39 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26190300658397 degrees.
06:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26190300658397 degrees.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:39 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:39 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:39 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:39 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:39 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:39 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:39 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:39 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:39 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:39 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:39 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.329889 (min) 0.0892252 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.222606 (min) 0.411162 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.27858 (min) -5.85374 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.76833 (min) -3.11552 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 29.2576 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.98066 (min) 5.57743 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3288 (min) 31.9264 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -7.87119e-05 (min) 0.000666965 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:39 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:39 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
06:39 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:39 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:39 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:39 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:39 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
06:39 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0 2]
06:39 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 0]
06:39 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 446.   0.]
 [  0.   0.   0.   0.   0.]
 [ 58.   0.   0. 370.   0.]
 [  2.   0. 554.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:39 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:39 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:39 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03790495177687185
06:39 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:39 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:39 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:39 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 5 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 4 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:39 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:39 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:39 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:39 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:39 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:39 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:39 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:39 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:39 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
06:39 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
06:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:39 INFO    opendrift.models.chemicaldrift:1861: partitioning: [63, 0, 175, 262, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:39 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:39 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:39 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:39 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:39 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:39 INFO    opendrift.models.basemodel:2009: 2024-04-03 10:35:51.781100 - step 36 of 96 - 500 active elements (0 deactivated)
06:39 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:39 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:39 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.75675872167721
06:39 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.73528304164093
06:39 DEBUG   opendrift.models.basemodel:2038:               -21.82883005939142   <- z ->   0.0
06:39 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:39 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:39 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:39 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 10:00:00 (before)
                2024-04-03 11:00:00 (after)
06:39 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 10:00:00) in space  (linearNDFast)
06:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:39 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 11:00:00) in space  (linearNDFast)
06:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:39 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 10:00:00, weight 0.40) and
                      after (2024-04-03 11:00:00, weight 0.60) in time
06:39 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26472798261352 degrees.
06:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26472798261352 degrees.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:39 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:39 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:39 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:39 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:39 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:39 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:39 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:39 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:39 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:39 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:39 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:39 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:39 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:39 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:39 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:39 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.309205 (min) 0.094342 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.207852 (min) 0.199464 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.37841 (min) -5.82228 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.73512 (min) -3.08606 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 28.5801 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00114 (min) 5.90888 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3373 (min) 33.3625 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -5.97141e-05 (min) 0.00048943 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:39 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:39 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:39 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:39 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:39 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:39 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:39 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:39 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
06:39 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2]
06:39 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0]
06:39 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 449.   0.]
 [  0.   0.   0.   0.   0.]
 [ 59.   0.   0. 376.   0.]
 [  2.   0. 558.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:39 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:39 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:40 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.03884414883903933
06:40 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:40 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:40 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:40 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 5 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
06:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [61, 0, 166, 273, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:40 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:40 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:40 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:40 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:40 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:40 INFO    opendrift.models.basemodel:2009: 2024-04-03 11:05:51.781100 - step 37 of 96 - 500 active elements (0 deactivated)
06:40 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:40 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:40 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.756362848836886
06:40 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.730967483971178
06:40 DEBUG   opendrift.models.basemodel:2038:               -22.44653605993196   <- z ->   -0.07711618852805469
06:40 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:40 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 11:00:00 (before)
                2024-04-03 12:00:00 (after)
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:42 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:42 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 42x26x7) for time after (2024-04-03 12:00:00)
06:42 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 11:00:00) in space  (linearNDFast)
06:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:42 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 12:00:00) in space  (linearNDFast)
06:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:42 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 11:00:00, weight 0.90) and
                      after (2024-04-03 12:00:00, weight 0.10) in time
06:42 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26904354762433 degrees.
06:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.26904354762433 degrees.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:42 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:42 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.361128 (min) 0.0990296 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.170415 (min) 0.189245 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.51385 (min) -5.80356 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.73069 (min) -3.08898 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 28.5869 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00665 (min) 5.738 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3621 (min) 32.5724 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -4.78472e-05 (min) 0.000600544 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:42 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
06:42 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:42 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
06:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 2]
06:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 0]
06:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 454.   0.]
 [  0.   0.   0.   0.   0.]
 [ 61.   0.   0. 384.   0.]
 [  2.   0. 558.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:42 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:42 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.040194209973289215
06:42 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:42 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:42 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
06:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
06:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [58, 0, 165, 277, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:42 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:42 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:42 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:42 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:42 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:42 INFO    opendrift.models.basemodel:2009: 2024-04-03 11:35:51.781100 - step 38 of 96 - 500 active elements (0 deactivated)
06:42 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:42 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:42 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.75770044553129
06:42 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.724993948285345
06:42 DEBUG   opendrift.models.basemodel:2038:               -21.469371897498135   <- z ->   -0.08098699348435034
06:42 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:42 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 11:00:00 (before)
                2024-04-03 12:00:00 (after)
06:42 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 11:00:00) in space  (linearNDFast)
06:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:42 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 12:00:00) in space  (linearNDFast)
06:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:42 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 11:00:00, weight 0.40) and
                      after (2024-04-03 12:00:00, weight 0.60) in time
06:42 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27501708233107 degrees.
06:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.27501708233107 degrees.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:42 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:42 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:42 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:42 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.429067 (min) 0.165352 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.115394 (min) 0.26346 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.72899 (min) -5.95063 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.82928 (min) -3.27314 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 30.2753 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.02326 (min) 5.80868 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3657 (min) 32.7495 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -5.32654e-05 (min) 0.000519237 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:42 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:42 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:42 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
06:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
06:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
06:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 455.   0.]
 [  0.   0.   0.   0.   0.]
 [ 63.   0.   0. 392.   0.]
 [  2.   0. 567.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:42 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:42 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.042537145248097846
06:42 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:42 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:42 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:42 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
06:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
06:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [59, 0, 160, 281, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:42 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:42 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:42 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:42 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:42 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:42 INFO    opendrift.models.basemodel:2009: 2024-04-03 12:05:51.781100 - step 39 of 96 - 500 active elements (0 deactivated)
06:42 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:42 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:42 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76130239946502
06:42 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.718257972608475
06:42 DEBUG   opendrift.models.basemodel:2038:               -21.83556436931808   <- z ->   0.0
06:42 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:42 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 12:00:00 (before)
                2024-04-03 13:00:00 (after)
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:44 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:44 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 42x28x7) for time after (2024-04-03 13:00:00)
06:44 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 12:00:00) in space  (linearNDFast)
06:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
/root/project/opendrift/readers/interpolation/interpolators.py:17: RuntimeWarning: overflow encountered in cast
  data[mask] = np.finfo(np.float64).min
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 13:00:00) in space  (linearNDFast)
06:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:44 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 12:00:00, weight 0.90) and
                      after (2024-04-03 13:00:00, weight 0.10) in time
06:44 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28175305164141 degrees.
06:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28175305164141 degrees.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:44 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:44 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.434835 (min) 0.132099 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.107672 (min) 0.204853 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -6.96578 (min) -6.12023 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.92214 (min) -3.42349 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 34.5516 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.03419 (min) 5.84645 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3682 (min) 32.9858 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000370387 (min) 0.000389088 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:44 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:44 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:44 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:44 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
06:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
06:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
06:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 457.   0.]
 [  0.   0.   0.   0.   0.]
 [ 64.   0.   0. 400.   0.]
 [  2.   0. 572.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:44 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:44 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.04501845328076411
06:44 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:44 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:44 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
06:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
06:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [58, 0, 151, 291, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:44 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:44 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:44 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:44 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:44 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:44 INFO    opendrift.models.basemodel:2009: 2024-04-03 12:35:51.781100 - step 40 of 96 - 500 active elements (0 deactivated)
06:44 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:44 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:44 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76236846131592
06:44 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.710666979619635
06:44 DEBUG   opendrift.models.basemodel:2038:               -21.31725988504672   <- z ->   -0.16586400224323417
06:44 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:44 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 12:00:00 (before)
                2024-04-03 13:00:00 (after)
06:44 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 12:00:00) in space  (linearNDFast)
06:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:44 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 13:00:00) in space  (linearNDFast)
06:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:44 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 12:00:00, weight 0.40) and
                      after (2024-04-03 13:00:00, weight 0.60) in time
06:44 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.289344045379124 degrees.
06:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.289344045379124 degrees.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:44 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:44 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:44 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:44 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.456328 (min) 0.103478 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0933073 (min) 0.253269 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -7.29172 (min) -6.38257 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.92745 (min) -3.43483 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 36.8078 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.06023 (min) 5.86724 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3679 (min) 33.1145 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000547939 (min) 0.000508065 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:44 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:44 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:44 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
06:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
06:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
06:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 457.   0.]
 [  0.   0.   0.   0.   0.]
 [ 65.   0.   0. 409.   0.]
 [  2.   0. 573.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:44 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:44 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.048210410667972416
06:44 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:44 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:44 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 5 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
06:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [59, 0, 141, 300, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:44 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:44 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:44 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:44 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:44 INFO    opendrift.models.basemodel:2009: 2024-04-03 13:05:51.781100 - step 41 of 96 - 500 active elements (0 deactivated)
06:44 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:44 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:44 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76344318527639
06:44 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.702904352807279
06:44 DEBUG   opendrift.models.basemodel:2038:               -19.52806854248047   <- z ->   -0.05903892647493292
06:44 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:44 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 13:00:00 (before)
                2024-04-03 14:00:00 (after)
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:46 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:46 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 41x30x7) for time after (2024-04-03 14:00:00)
06:46 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 13:00:00) in space  (linearNDFast)
06:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 14:00:00) in space  (linearNDFast)
06:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:46 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 13:00:00, weight 0.90) and
                      after (2024-04-03 14:00:00, weight 0.10) in time
06:46 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29710667159181 degrees.
06:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29710667159181 degrees.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:46 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:46 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:46 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:46 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:46 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:46 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:46 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.4723 (min) 0.393683 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0777693 (min) 0.594473 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -7.68372 (min) -6.6559 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.93625 (min) -3.44637 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 39.7733 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.07247 (min) 5.77991 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3494 (min) 32.6555 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000521541 (min) 0.000914692 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:46 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
06:46 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:46 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:46 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:46 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:46 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
06:46 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0]
06:46 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3]
06:46 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 461.   0.]
 [  0.   0.   0.   0.   0.]
 [ 65.   0.   0. 418.   0.]
 [  2.   0. 573.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:46 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:46 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:46 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.052821912126803566
06:46 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:46 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:46 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
06:46 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:46 INFO    opendrift.models.chemicaldrift:1861: partitioning: [55, 0, 136, 309, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:46 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:46 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:46 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:46 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:46 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:46 INFO    opendrift.models.basemodel:2009: 2024-04-03 13:35:51.781100 - step 42 of 96 - 500 active elements (0 deactivated)
06:46 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:46 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:46 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.765048153994094
06:46 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.703595978604643
06:46 DEBUG   opendrift.models.basemodel:2038:               -19.643577575683594   <- z ->   0.0
06:46 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:46 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 13:00:00 (before)
                2024-04-03 14:00:00 (after)
06:46 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 13:00:00) in space  (linearNDFast)
06:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:46 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 14:00:00) in space  (linearNDFast)
06:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:46 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 13:00:00, weight 0.40) and
                      after (2024-04-03 14:00:00, weight 0.60) in time
06:46 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29641505475391 degrees.
06:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29641505475391 degrees.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:46 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:46 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:46 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:46 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:46 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:46 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:46 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:46 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:46 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:46 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:46 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.475743 (min) 0.29133 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0574018 (min) 0.788914 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -8.13646 (min) -6.97451 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.99009 (min) -3.44916 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 43.713 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.08939 (min) 5.76879 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3892 (min) 32.6108 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000210927 (min) 0.000494435 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:46 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:46 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:46 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:46 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:46 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:46 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:46 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:46 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
06:46 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2]
06:46 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0]
06:46 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 463.   0.]
 [  0.   0.   0.   0.   0.]
 [ 67.   0.   0. 423.   0.]
 [  2.   0. 573.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:46 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:46 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:46 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.05662865988193987
06:46 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:46 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:46 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:46 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:46 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:46 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:46 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
06:46 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
06:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:46 INFO    opendrift.models.chemicaldrift:1861: partitioning: [55, 0, 133, 312, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:46 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:46 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:46 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:46 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:46 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:46 INFO    opendrift.models.basemodel:2009: 2024-04-03 14:05:51.781100 - step 43 of 96 - 500 active elements (0 deactivated)
06:46 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:46 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:46 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76558677072023
06:46 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.702831906156963
06:46 DEBUG   opendrift.models.basemodel:2038:               -19.643577575683594   <- z ->   -0.2361527350248107
06:46 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:46 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:46 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:46 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:46 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 14:00:00 (before)
                2024-04-03 15:00:00 (after)
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:48 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:48 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 42x32x7) for time after (2024-04-03 15:00:00)
06:48 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 14:00:00) in space  (linearNDFast)
06:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:48 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 15:00:00) in space  (linearNDFast)
06:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:48 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 14:00:00, weight 0.90) and
                      after (2024-04-03 15:00:00, weight 0.10) in time
06:48 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:48 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29717911962562 degrees.
06:48 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29717911962562 degrees.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:48 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:48 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:48 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:48 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:48 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:48 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:48 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.494712 (min) 0.311434 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0374292 (min) 0.672892 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -8.58621 (min) -7.28298 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.04955 (min) -3.42613 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 46.6682 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.09686 (min) 5.78511 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.383 (min) 32.6776 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -9.34163e-05 (min) 0.000709303 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:48 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:48 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:48 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:48 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:48 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
06:48 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 0 2 3 2 0]
06:48 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 3 0 0 0 3]
06:48 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 467.   0.]
 [  0.   0.   0.   0.   0.]
 [ 71.   0.   0. 426.   0.]
 [  3.   0. 575.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:48 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:48 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:48 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.0621200220009047
06:48 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:48 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:48 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
06:48 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
06:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:48 INFO    opendrift.models.chemicaldrift:1861: partitioning: [56, 0, 128, 316, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:48 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:48 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:48 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:48 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:48 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:48 INFO    opendrift.models.basemodel:2009: 2024-04-03 14:35:51.781100 - step 44 of 96 - 500 active elements (0 deactivated)
06:48 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:48 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:48 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76586104300879
06:48 DEBUG   opendrift.models.basemodel:2033:               10.495330842961014 <- longitude -> 10.70288287581112
06:48 DEBUG   opendrift.models.basemodel:2038:               -22.3021769993951   <- z ->   -0.05498376854529932
06:48 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:48 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 14:00:00 (before)
                2024-04-03 15:00:00 (after)
06:48 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 14:00:00) in space  (linearNDFast)
06:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:48 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 15:00:00) in space  (linearNDFast)
06:48 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:48 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 14:00:00, weight 0.40) and
                      after (2024-04-03 15:00:00, weight 0.60) in time
06:48 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:48 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29712815427968 degrees.
06:48 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29712815427968 degrees.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:48 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:48 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:48 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:48 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:48 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:48 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:48 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:48 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:48 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:48 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:48 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:48 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.543696 (min) 0.334513 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.050849 (min) 0.752894 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -8.80731 (min) -7.54975 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.21588 (min) -3.45586 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 49.7846 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.11244 (min) 5.91612 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3762 (min) 33.3553 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000507735 (min) 0.000935071 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:48 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:48 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:48 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:48 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:48 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:48 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:48 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:48 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
06:48 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 2 2 0 0]
06:48 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 0 3 3]
06:48 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 472.   0.]
 [  0.   0.   0.   0.   0.]
 [ 74.   0.   0. 431.   0.]
 [  3.   0. 579.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:48 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:48 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:48 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.06625089048320934
06:48 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:48 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:48 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 3 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:48 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
06:48 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 34
06:48 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:48 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 34 elements
06:48 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:48 INFO    opendrift.models.chemicaldrift:1861: partitioning: [54, 0, 152, 294, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:48 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:48 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:48 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:48 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:48 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:48 INFO    opendrift.models.basemodel:2009: 2024-04-03 15:05:51.781100 - step 45 of 96 - 500 active elements (0 deactivated)
06:48 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:48 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:48 DEBUG   opendrift.models.basemodel:2028:               57.54713481034952 <- latitude  -> 57.76503850853611
06:48 DEBUG   opendrift.models.basemodel:2033:               10.495330842961014 <- longitude -> 10.708352389087237
06:48 DEBUG   opendrift.models.basemodel:2038:               -23.8927001953125   <- z ->   0.0
06:48 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:48 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:48 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:48 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:48 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:48 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 15:00:00 (before)
                2024-04-03 16:00:00 (after)
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:50 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:50 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 44x34x7) for time after (2024-04-03 16:00:00)
06:50 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 15:00:00) in space  (linearNDFast)
06:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 16:00:00) in space  (linearNDFast)
06:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:50 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 15:00:00, weight 0.90) and
                      after (2024-04-03 16:00:00, weight 0.10) in time
06:50 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29165864310418 degrees.
06:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.29165864310418 degrees.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:50 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:50 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:50 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:50 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:50 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:50 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:50 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.603265 (min) 0.423823 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.0315224 (min) 0.623504 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -8.94068 (min) -7.80339 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.35649 (min) -3.44015 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 51.5219 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.11694 (min) 5.87606 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.368 (min) 33.2104 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000453156 (min) 0.000624268 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:50 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:50 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
06:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0]
06:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3]
06:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 475.   0.]
 [  0.   0.   0.   0.   0.]
 [ 75.   0.   0. 438.   0.]
 [  3.   0. 613.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:50 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:50 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.06896377182572291
06:50 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:50 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:50 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:50 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 100
06:50 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 100 elements
06:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:50 INFO    opendrift.models.chemicaldrift:1861: partitioning: [52, 0, 242, 206, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:50 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:50 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:50 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:50 INFO    opendrift.models.basemodel:2009: 2024-04-03 15:35:51.781100 - step 46 of 96 - 500 active elements (0 deactivated)
06:50 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:50 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:50 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.76639224697813
06:50 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.711559417767399
06:50 DEBUG   opendrift.models.basemodel:2038:               -26.34010180679484   <- z ->   0.0
06:50 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:50 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 15:00:00 (before)
                2024-04-03 16:00:00 (after)
06:50 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 15:00:00) in space  (linearNDFast)
06:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:50 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 16:00:00) in space  (linearNDFast)
06:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:50 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 15:00:00, weight 0.40) and
                      after (2024-04-03 16:00:00, weight 0.60) in time
06:50 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28845160375449 degrees.
06:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28845160375449 degrees.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:50 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:50 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:50 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:50 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:50 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:50 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:50 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:50 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:50 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:50 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:50 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.826558 (min) 0.485151 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.10877 (min) 0.685437 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -9.1707 (min) -7.97644 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.18281 (min) -3.19723 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 55.0973 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.1115 (min) 5.93013 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3961 (min) 33.5 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000493084 (min) 0.000803917 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:50 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:50 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:50 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
06:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 2 2 0]
06:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 3]
06:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 477.   0.]
 [  0.   0.   0.   0.   0.]
 [ 77.   0.   0. 447.   0.]
 [  4.   0. 713.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:50 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:50 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.07161493370727648
06:50 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:50 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:50 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:50 DEBUG   opendrift.models.oceandrift:624: 70 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:50 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:50 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:50 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 30
06:50 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 30 elements
06:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:50 INFO    opendrift.models.chemicaldrift:1861: partitioning: [53, 0, 262, 185, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:50 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:50 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:50 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:50 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:50 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:50 INFO    opendrift.models.basemodel:2009: 2024-04-03 16:05:51.781100 - step 47 of 96 - 500 active elements (0 deactivated)
06:50 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:50 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:50 DEBUG   opendrift.models.basemodel:2028:               57.54713481034952 <- latitude  -> 57.7687914171117
06:50 DEBUG   opendrift.models.basemodel:2033:               10.495330842961009 <- longitude -> 10.71091977854785
06:50 DEBUG   opendrift.models.basemodel:2038:               -37.29160930917998   <- z ->   -0.19036837682839505
06:50 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:50 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:50 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:50 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:50 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 16:00:00 (before)
                2024-04-03 17:00:00 (after)
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:53 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:53 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 44x35x7) for time after (2024-04-03 17:00:00)
06:53 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 16:00:00) in space  (linearNDFast)
06:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:53 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 17:00:00) in space  (linearNDFast)
06:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
06:53 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 16:00:00, weight 0.90) and
                      after (2024-04-03 17:00:00, weight 0.10) in time
06:53 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28909123069546 degrees.
06:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.28909123069546 degrees.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:53 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:53 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:53 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:53 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:53 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:53 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:53 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.63536 (min) 0.34429 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.13737 (min) 0.812679 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -9.36561 (min) -8.1557 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -4.01167 (min) -3.00053 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 56.7963 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.11877 (min) 5.95323 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3056 (min) 33.6233 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000549827 (min) 0.000991803 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:53 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:53 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:53 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:53 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
06:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0]
06:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3]
06:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 481.   0.]
 [  0.   0.   0.   0.   0.]
 [ 78.   0.   0. 455.   0.]
 [  4.   0. 743.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:53 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:53 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.07419665854740676
06:53 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:53 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:53 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:53 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 71
06:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 71 elements
06:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [50, 0, 319, 131, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:53 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:53 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:53 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:53 INFO    opendrift.models.basemodel:2009: 2024-04-03 16:35:51.781100 - step 48 of 96 - 500 active elements (0 deactivated)
06:53 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:53 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:53 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.77431128530786
06:53 DEBUG   opendrift.models.basemodel:2033:               10.495330842961012 <- longitude -> 10.710048627913952
06:53 DEBUG   opendrift.models.basemodel:2038:               -28.275967716151012   <- z ->   0.0
06:53 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:53 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 16:00:00 (before)
                2024-04-03 17:00:00 (after)
06:53 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 16:00:00) in space  (linearNDFast)
06:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 17:00:00) in space  (linearNDFast)
06:53 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:53 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 16:00:00, weight 0.40) and
                      after (2024-04-03 17:00:00, weight 0.60) in time
06:53 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.289962386532586 degrees.
06:53 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.504680260148106 and -59.289962386532586 degrees.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:53 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:53 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:53 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:53 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:53 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:53 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:53 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:53 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:53 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:53 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:53 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:53 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.885165 (min) 0.391015 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.147677 (min) 0.855497 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -9.54419 (min) -8.58326 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.90334 (min) -3.06565 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 58.0869 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.11035 (min) 5.91873 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3261 (min) 33.3969 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.00035074 (min) 0.00117069 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:53 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:53 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:53 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:53 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:53 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:53 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:53 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:53 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
06:53 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
06:53 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
06:53 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 483.   0.]
 [  0.   0.   0.   0.   0.]
 [ 79.   0.   0. 468.   0.]
 [  4.   0. 814.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:53 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:53 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:53 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.07454865223786758
06:53 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:53 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:53 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:53 DEBUG   opendrift.models.oceandrift:624: 48 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:53 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:53 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:53 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 29
06:53 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:53 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 29 elements
06:53 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:53 INFO    opendrift.models.chemicaldrift:1861: partitioning: [49, 0, 322, 129, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:53 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:53 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:53 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:53 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:53 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:53 INFO    opendrift.models.basemodel:2009: 2024-04-03 17:05:51.781100 - step 49 of 96 - 500 active elements (0 deactivated)
06:53 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:53 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:53 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.778114387017425
06:53 DEBUG   opendrift.models.basemodel:2033:               10.470170964761893 <- longitude -> 10.70573960704139
06:53 DEBUG   opendrift.models.basemodel:2038:               -22.893213167742736   <- z ->   -0.01996717836685799
06:53 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:53 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:53 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:53 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:53 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:53 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 17:00:00 (before)
                2024-04-03 18:00:00 (after)
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:55 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:55 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 45x38x7) for time after (2024-04-03 18:00:00)
06:55 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 17:00:00) in space  (linearNDFast)
06:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:55 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 18:00:00) in space  (linearNDFast)
06:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
06:55 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 17:00:00, weight 0.90) and
                      after (2024-04-03 18:00:00, weight 0.10) in time
06:55 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.52984008275071 and -59.294271416382244 degrees.
06:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.52984008275071 and -59.294271416382244 degrees.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:55 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:55 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:55 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:55 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:55 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:55 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:55 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.692571 (min) 0.436537 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.176183 (min) 0.783234 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -9.80451 (min) -8.80319 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.75957 (min) -2.98518 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 63.5661 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.09664 (min) 5.89602 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3677 (min) 33.1094 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000459832 (min) 0.0008856 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:55 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:55 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:55 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:55 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
06:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 2 2 2 2 0]
06:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 0 0 0 0 3]
06:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 487.   0.]
 [  0.   0.   0.   0.   0.]
 [ 84.   0.   0. 493.   0.]
 [  4.   0. 843.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:55 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:55 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.07689685848597523
06:55 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:55 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:55 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:55 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 41
06:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 41 elements
06:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [50, 0, 337, 113, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:55 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:55 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:55 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:55 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:55 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:55 INFO    opendrift.models.basemodel:2009: 2024-04-03 17:35:51.781100 - step 50 of 96 - 500 active elements (0 deactivated)
06:55 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:55 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:55 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.78281868783755
06:55 DEBUG   opendrift.models.basemodel:2033:               10.455573346669022 <- longitude -> 10.708786743443577
06:55 DEBUG   opendrift.models.basemodel:2038:               -26.24232341979589   <- z ->   0.0
06:55 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:55 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 17:00:00 (before)
                2024-04-03 18:00:00 (after)
06:55 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 17:00:00) in space  (linearNDFast)
06:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:55 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 18:00:00) in space  (linearNDFast)
06:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:55 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 17:00:00, weight 0.40) and
                      after (2024-04-03 18:00:00, weight 0.60) in time
06:55 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.54443769062738 and -59.2912242813356 degrees.
06:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.54443769062738 and -59.2912242813356 degrees.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:55 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:55 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:55 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:55 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:55 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:55 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:55 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:55 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:55 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:55 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:55 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.905308 (min) 0.422475 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.121132 (min) 0.668788 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.1513 (min) -9.02279 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.44178 (min) -2.90507 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 66.8103 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.09333 (min) 5.96247 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4025 (min) 33.712 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000329322 (min) 0.00132433 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:55 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:55 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:55 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
06:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2 0 2 0 0]
06:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0 3 0 3 3]
06:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 493.   0.]
 [  0.   0.   0.   0.   0.]
 [ 87.   0.   0. 514.   0.]
 [  4.   0. 884.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:55 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:55 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.08242075377235492
06:55 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:55 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:55 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:55 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:55 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 23
06:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 23 elements
06:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [47, 0, 342, 111, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:55 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:55 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:55 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:55 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:55 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:55 INFO    opendrift.models.basemodel:2009: 2024-04-03 18:05:51.781100 - step 51 of 96 - 500 active elements (0 deactivated)
06:55 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:55 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:55 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.787977255045526
06:55 DEBUG   opendrift.models.basemodel:2033:               10.430351416389225 <- longitude -> 10.710200954776626
06:55 DEBUG   opendrift.models.basemodel:2038:               -29.855048739066547   <- z ->   -0.005770024292656356
06:55 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:55 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:55 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:55 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:55 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 18:00:00 (before)
                2024-04-03 19:00:00 (after)
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
06:58 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
06:58 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 46x39x7) for time after (2024-04-03 19:00:00)
06:58 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 18:00:00) in space  (linearNDFast)
06:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:58 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 19:00:00) in space  (linearNDFast)
06:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
06:58 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 18:00:00, weight 0.90) and
                      after (2024-04-03 19:00:00, weight 0.10) in time
06:58 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.56965961969554 and -59.28981007229858 degrees.
06:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.56965961969554 and -59.28981007229858 degrees.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:58 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:58 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:58 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:58 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:58 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:58 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:58 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.885274 (min) 0.39637 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.120698 (min) 0.751991 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.6278 (min) -9.3224 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.2865 (min) -2.69339 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 76.6884 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.08462 (min) 5.97516 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2608 (min) 33.7996 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000316737 (min) 0.00119054 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:58 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:58 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
06:58 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:58 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
06:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 0 2 0 2]
06:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 3 0 3 0]
06:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 497.   0.]
 [  0.   0.   0.   0.   0.]
 [ 91.   0.   0. 529.   0.]
 [  4.   0. 907.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:58 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:58 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.08807048869186919
06:58 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:58 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:58 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:58 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 45 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
06:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
06:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [47, 0, 348, 105, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:58 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:58 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:58 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:58 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:58 INFO    opendrift.models.basemodel:2009: 2024-04-03 18:35:51.781100 - step 52 of 96 - 500 active elements (0 deactivated)
06:58 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:58 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:58 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.788355827214126
06:58 DEBUG   opendrift.models.basemodel:2033:               10.408579026943196 <- longitude -> 10.711984336194876
06:58 DEBUG   opendrift.models.basemodel:2038:               -32.746147330342005   <- z ->   0.0
06:58 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:58 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 18:00:00 (before)
                2024-04-03 19:00:00 (after)
06:58 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 18:00:00) in space  (linearNDFast)
06:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:58 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 19:00:00) in space  (linearNDFast)
06:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
06:58 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 18:00:00, weight 0.40) and
                      after (2024-04-03 19:00:00, weight 0.60) in time
06:58 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
06:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5914320303999 and -59.28802668527149 degrees.
06:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.5914320303999 and -59.28802668527149 degrees.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
06:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:58 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
06:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
06:58 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
06:58 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
06:58 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
06:58 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
06:58 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
06:58 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
06:58 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
06:58 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
06:58 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
06:58 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.85772 (min) 0.42894 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.168186 (min) 0.681453 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.2093 (min) -9.94049 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -3.0815 (min) -2.40316 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 77.5108 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.07425 (min) 5.925 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2885 (min) 33.493 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000280199 (min) 0.00125521 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
06:58 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
06:58 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
06:58 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
06:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
06:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
06:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
06:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
06:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
06:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 499.   0.]
 [  0.   0.   0.   0.   0.]
 [ 92.   0.   0. 547.   0.]
 [  4.   0. 935.   0.   0.]
 [  0.   0.   0.   0.   0.]]
06:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
06:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
06:58 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
06:58 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.09722623639094732
06:58 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
06:58 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
06:58 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
06:58 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 49 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
06:58 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
06:58 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
06:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
06:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
06:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
06:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
06:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [46, 0, 350, 104, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
06:58 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
06:58 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
06:58 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
06:58 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
06:58 DEBUG   opendrift.models.basemodel:2008: ======================================================================
06:58 INFO    opendrift.models.basemodel:2009: 2024-04-03 19:05:51.781100 - step 53 of 96 - 500 active elements (0 deactivated)
06:58 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
06:58 DEBUG   opendrift.models.basemodel:2017: ======================================================================
06:58 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.79656224570143
06:58 DEBUG   opendrift.models.basemodel:2033:               10.395259370919105 <- longitude -> 10.714920645737537
06:58 DEBUG   opendrift.models.basemodel:2038:               -34.30222342555093   <- z ->   -0.12309442864334974
06:58 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
06:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:58 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
06:58 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
06:58 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
06:58 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 19:00:00 (before)
                2024-04-03 20:00:00 (after)
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:00 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:00 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 46x40x7) for time after (2024-04-03 20:00:00)
07:00 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 19:00:00) in space  (linearNDFast)
07:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:00 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 20:00:00) in space  (linearNDFast)
07:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:00 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 19:00:00, weight 0.90) and
                      after (2024-04-03 20:00:00, weight 0.10) in time
07:00 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.60475168082799 and -59.28509038031381 degrees.
07:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.60475168082799 and -59.28509038031381 degrees.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:00 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:00 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:00 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:00 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:00 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:00 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:00 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.869411 (min) 0.364957 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.184539 (min) 0.700495 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.7329 (min) -10.6697 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -2.81519 (min) -2.029 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 78.1329 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.05885 (min) 5.99288 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.339 (min) 33.8117 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000288091 (min) 0.00131031 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:00 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:00 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:00 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
07:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2]
07:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0]
07:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 499.   0.]
 [  0.   0.   0.   0.   0.]
 [ 98.   0.   0. 556.   0.]
 [  4.   0. 947.   0.   0.]
 [  0.   0.   0.   0.   0.]]
07:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:00 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:00 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10496586103188335
07:00 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:00 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:00 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:00 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 44 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
07:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
07:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [52, 0, 346, 102, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:00 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:00 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:00 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
07:00 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:00 INFO    opendrift.models.basemodel:2009: 2024-04-03 19:35:51.781100 - step 54 of 96 - 500 active elements (0 deactivated)
07:00 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:00 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:00 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.797167930699985
07:00 DEBUG   opendrift.models.basemodel:2033:               10.368977069309958 <- longitude -> 10.708080865076848
07:00 DEBUG   opendrift.models.basemodel:2038:               -37.11197043097783   <- z ->   -0.18623049168639932
07:00 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:00 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 19:00:00 (before)
                2024-04-03 20:00:00 (after)
07:00 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 19:00:00) in space  (linearNDFast)
07:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:00 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 20:00:00) in space  (linearNDFast)
07:00 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:00 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 19:00:00, weight 0.40) and
                      after (2024-04-03 20:00:00, weight 0.60) in time
07:00 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.631033993400195 and -59.29193015271127 degrees.
07:00 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.631033993400195 and -59.29193015271127 degrees.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:00 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:00 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:00 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:00 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:00 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:00 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:00 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:00 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:00 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:00 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:00 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:00 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.81066 (min) 0.347746 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.192645 (min) 0.737677 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.0716 (min) -11.2685 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -1.95021 (min) -1.22441 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 78.6325 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.04392 (min) 6.07697 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3311 (min) 34.1734 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.00029018 (min) 0.00132243 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:00 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:00 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:00 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:00 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:00 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:00 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:00 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 2 0 0]
07:00 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 0 3 3]
07:00 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 503.   0.]
 [  0.   0.   0.   0.   0.]
 [101.   0.   0. 569.   0.]
 [  4.   0. 962.   0.   0.]
 [  0.   0.   0.   0.   0.]]
07:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:00 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:00 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:00 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10685026399517003
07:00 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:00 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:00 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:00 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 43 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:00 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:00 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:00 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
07:00 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:00 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
07:00 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:00 INFO    opendrift.models.chemicaldrift:1861: partitioning: [51, 0, 344, 105, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:00 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:00 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:00 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:00 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:00 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:00 INFO    opendrift.models.basemodel:2009: 2024-04-03 20:05:51.781100 - step 55 of 96 - 500 active elements (0 deactivated)
07:00 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:00 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:00 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.803120638288355
07:00 DEBUG   opendrift.models.basemodel:2033:               10.358365321436915 <- longitude -> 10.705865500468065
07:00 DEBUG   opendrift.models.basemodel:2038:               -37.153581907043446   <- z ->   0.0
07:00 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:00 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:00 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:00 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:00 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:00 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 20:00:00 (before)
                2024-04-03 21:00:00 (after)
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:01 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:01 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 47x42x7) for time after (2024-04-03 21:00:00)
07:01 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 20:00:00) in space  (linearNDFast)
07:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:01 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 21:00:00) in space  (linearNDFast)
07:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 20:00:00, weight 0.90) and
                      after (2024-04-03 21:00:00, weight 0.10) in time
07:01 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.641645737571494 and -59.294145517602225 degrees.
07:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.641645737571494 and -59.294145517602225 degrees.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:01 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:01 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.776677 (min) 0.276677 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.189619 (min) 0.763045 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.4656 (min) -11.6288 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -1.11883 (min) -0.348481 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 85.5494 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.03868 (min) 6.10731 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3488 (min) 34.264 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000320684 (min) 0.00122712 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:01 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:01 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:01 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 0 2]
07:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 3 0]
07:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 507.   0.]
 [  0.   0.   0.   0.   0.]
 [104.   0.   0. 583.   0.]
 [  4.   0. 977.   0.   0.]
 [  0.   0.   0.   0.   0.]]
07:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:01 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:01 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11259231332179921
07:01 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:01 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:01 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 43 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
07:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
07:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [50, 0, 338, 112, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:01 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:01 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:01 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:01 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:01 INFO    opendrift.models.basemodel:2009: 2024-04-03 20:35:51.781100 - step 56 of 96 - 500 active elements (0 deactivated)
07:01 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:01 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:01 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.81235012808656
07:01 DEBUG   opendrift.models.basemodel:2033:               10.348854521660488 <- longitude -> 10.704361366558585
07:01 DEBUG   opendrift.models.basemodel:2038:               -38.32196802165236   <- z ->   0.0
07:01 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:01 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 20:00:00 (before)
                2024-04-03 21:00:00 (after)
07:01 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 20:00:00) in space  (linearNDFast)
07:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 21:00:00) in space  (linearNDFast)
07:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:01 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 20:00:00, weight 0.40) and
                      after (2024-04-03 21:00:00, weight 0.60) in time
07:01 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.651156551580925 and -59.29564964870069 degrees.
07:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.651156551580925 and -59.29564964870069 degrees.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:01 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:01 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:01 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:01 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:01 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:01 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:01 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:01 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.777828 (min) 0.263028 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.18823 (min) 0.766214 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.2851 (min) -11.3132 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: -0.0552262 (min) 0.344877 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 92.9745 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.01797 (min) 6.14629 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3946 (min) 34.3279 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000343579 (min) 0.001029 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:01 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:01 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:01 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
07:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 2]
07:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 0]
07:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 509.   0.]
 [  0.   0.   0.   0.   0.]
 [107.   0.   0. 601.   0.]
 [  4.   0. 992.   0.   0.]
 [  0.   0.   0.   0.   0.]]
07:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:01 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:01 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10907940908886653
07:01 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:01 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:01 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:01 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:01 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
07:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
07:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [51, 0, 333, 116, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:01 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:01 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:01 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:01 DEBUG   opendrift.models.basemodel:728: Lifting 6 elements to seafloor.
07:01 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:01 INFO    opendrift.models.basemodel:2009: 2024-04-03 21:05:51.781100 - step 57 of 96 - 500 active elements (0 deactivated)
07:01 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:01 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:01 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.81598024112633
07:01 DEBUG   opendrift.models.basemodel:2033:               10.34004835199194 <- longitude -> 10.70791836548282
07:01 DEBUG   opendrift.models.basemodel:2038:               -36.27071058619402   <- z ->   0.0
07:01 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:01 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:01 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:01 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:01 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 21:00:00 (before)
                2024-04-03 22:00:00 (after)
07:03 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:03 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:03 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:03 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:03 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:03 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:03 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 47x43x7) for time after (2024-04-03 22:00:00)
07:03 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 21:00:00) in space  (linearNDFast)
07:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:03 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 22:00:00) in space  (linearNDFast)
07:03 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:03 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 21:00:00, weight 0.90) and
                      after (2024-04-03 22:00:00, weight 0.10) in time
07:03 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.65996270432073 and -59.29209265540566 degrees.
07:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.65996270432073 and -59.29209265540566 degrees.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:04 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:04 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:04 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:04 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:04 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:04 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:04 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:04 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:04 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.808886 (min) 0.243098 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.228753 (min) 0.815261 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.0728 (min) -10.9617 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 0.782752 (min) 1.44147 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 94.7833 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.01928 (min) 6.00177 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4218 (min) 34.0028 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000348324 (min) 0.00109828 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:04 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:04 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:04 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
07:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 0 0]
07:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3]
07:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  513.    0.]
 [   0.    0.    0.    0.    0.]
 [ 108.    0.    0.  614.    0.]
 [   4.    0. 1003.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:04 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:04 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10593695577908538
07:04 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:04 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:04 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:04 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 44 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
07:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
07:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [48, 0, 324, 128, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:04 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:04 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:04 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:04 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:04 INFO    opendrift.models.basemodel:2009: 2024-04-03 21:35:51.781100 - step 58 of 96 - 500 active elements (0 deactivated)
07:04 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:04 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:04 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.81545129299716
07:04 DEBUG   opendrift.models.basemodel:2033:               10.32713604887608 <- longitude -> 10.70811198514337
07:04 DEBUG   opendrift.models.basemodel:2038:               -37.5579059038128   <- z ->   0.0
07:04 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:04 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 21:00:00 (before)
                2024-04-03 22:00:00 (after)
07:04 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 21:00:00) in space  (linearNDFast)
07:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 22:00:00) in space  (linearNDFast)
07:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:04 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 21:00:00, weight 0.40) and
                      after (2024-04-03 22:00:00, weight 0.60) in time
07:04 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.67287502382756 and -59.291899037550266 degrees.
07:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.67287502382756 and -59.291899037550266 degrees.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:04 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:04 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:04 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:04 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:04 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:04 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:04 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:04 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:04 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:04 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:04 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.771043 (min) 0.218662 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.200138 (min) 0.871743 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.8062 (min) -10.4722 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.35097 (min) 2.55175 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 94.663 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00736 (min) 6.13137 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4249 (min) 34.2683 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000340224 (min) 0.00108003 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:04 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:04 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:04 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:04 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
07:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0]
07:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3]
07:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  514.    0.]
 [   0.    0.    0.    0.    0.]
 [ 108.    0.    0.  630.    0.]
 [   4.    0. 1011.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:04 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:04 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10248087073186889
07:04 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:04 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:04 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 47 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:04 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:04 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
07:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
07:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [47, 0, 319, 134, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:04 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:04 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:04 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:04 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:04 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:04 INFO    opendrift.models.basemodel:2009: 2024-04-03 22:05:51.781100 - step 59 of 96 - 500 active elements (0 deactivated)
07:04 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:04 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:04 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.824572554628574
07:04 DEBUG   opendrift.models.basemodel:2033:               10.308837386129625 <- longitude -> 10.70859584731047
07:04 DEBUG   opendrift.models.basemodel:2038:               -34.809922073988325   <- z ->   0.0
07:04 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:04 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:04 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:04 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:04 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 22:00:00 (before)
                2024-04-03 23:00:00 (after)
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:05 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 47x45x7) for time after (2024-04-03 23:00:00)
07:05 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 22:00:00) in space  (linearNDFast)
07:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:05 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 23:00:00) in space  (linearNDFast)
07:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:05 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 22:00:00, weight 0.90) and
                      after (2024-04-03 23:00:00, weight 0.10) in time
07:05 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6911736826534 and -59.29141518894042 degrees.
07:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.6911736826534 and -59.29141518894042 degrees.
07:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:05 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:05 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:05 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:05 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:05 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:05 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:05 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:05 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:05 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:05 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:05 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:05 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.826555 (min) 0.237668 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.213644 (min) 0.864764 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.6859 (min) -10.0934 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.96472 (min) 3.54908 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 96.5825 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.98987 (min) 6.12952 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4042 (min) 34.2661 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000313612 (min) 0.00104269 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:05 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:05 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:05 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:06 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:06 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
07:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 3 2 2 2 2]
07:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0]
07:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  514.    0.]
 [   0.    0.    0.    0.    0.]
 [ 113.    0.    0.  641.    0.]
 [   5.    0. 1017.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:06 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:06 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10281427303224759
07:06 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:06 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:06 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:06 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
07:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
07:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [53, 0, 311, 136, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:06 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:06 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:06 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:06 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:06 INFO    opendrift.models.basemodel:2009: 2024-04-03 22:35:51.781100 - step 60 of 96 - 500 active elements (0 deactivated)
07:06 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:06 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:06 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.83342656003008
07:06 DEBUG   opendrift.models.basemodel:2033:               10.292559389010375 <- longitude -> 10.709344362527538
07:06 DEBUG   opendrift.models.basemodel:2038:               -33.888607359562855   <- z ->   0.0
07:06 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:06 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:06 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:06 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 22:00:00 (before)
                2024-04-03 23:00:00 (after)
07:06 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 22:00:00) in space  (linearNDFast)
07:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:06 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-03 23:00:00) in space  (linearNDFast)
07:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:06 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 22:00:00, weight 0.40) and
                      after (2024-04-03 23:00:00, weight 0.60) in time
07:06 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.70745168004085 and -59.29066666125159 degrees.
07:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.70745168004085 and -59.29066666125159 degrees.
07:06 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:06 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:06 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:06 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:06 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:06 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:06 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:06 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:06 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:06 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:06 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:06 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:06 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:06 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:06 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:06 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:06 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:06 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:06 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.770806 (min) 0.200618 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.22876 (min) 0.948483 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.6068 (min) -9.99704 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.04466 (min) 4.08145 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 96.6427 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.99027 (min) 6.18366 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3724 (min) 34.3883 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000252837 (min) 0.00100234 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:06 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:06 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
07:06 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:06 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
07:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 2 2 2 2]
07:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 0 0 0 0]
07:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  517.    0.]
 [   0.    0.    0.    0.    0.]
 [ 118.    0.    0.  661.    0.]
 [   5.    0. 1034.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:06 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:06 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10664124677936651
07:06 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:06 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:06 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:06 DEBUG   opendrift.models.oceandrift:624: 41 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 44 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 42 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:06 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:06 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 16
07:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 16 elements
07:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [55, 0, 302, 143, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:06 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:06 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:06 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:06 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:06 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:06 INFO    opendrift.models.basemodel:2009: 2024-04-03 23:05:51.781100 - step 61 of 96 - 500 active elements (0 deactivated)
07:06 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:06 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:06 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.83182771890556
07:06 DEBUG   opendrift.models.basemodel:2033:               10.282820020283314 <- longitude -> 10.710071166407793
07:06 DEBUG   opendrift.models.basemodel:2038:               -36.22278759455039   <- z ->   0.0
07:06 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:06 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:06 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:06 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:06 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 23:00:00 (before)
                2024-04-04 00:00:00 (after)
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:08 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:08 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 49x46x7) for time after (2024-04-04 00:00:00)
07:08 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 23:00:00) in space  (linearNDFast)
07:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:08 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 00:00:00) in space  (linearNDFast)
07:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:08 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 23:00:00, weight 0.90) and
                      after (2024-04-04 00:00:00, weight 0.10) in time
07:08 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.717191051517375 and -59.28993986844625 degrees.
07:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.717191051517375 and -59.28993986844625 degrees.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:08 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:08 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:08 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:08 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:08 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:08 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:08 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.763889 (min) 0.307459 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.242521 (min) 1.02014 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.5887 (min) -9.8663 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.78548 (min) 4.53565 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 98.1759 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.97483 (min) 6.21757 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4258 (min) 34.4315 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000214038 (min) 0.00112857 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:08 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 5 elements to seafloor.
07:08 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:08 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 3 0]
07:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 0 3]
07:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  519.    0.]
 [   0.    0.    0.    0.    0.]
 [ 122.    0.    0.  681.    0.]
 [   6.    0. 1050.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:08 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:08 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11074928026147154
07:08 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:08 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:08 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:08 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
07:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
07:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [58, 0, 295, 147, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:08 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:08 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:08 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:08 INFO    opendrift.models.basemodel:2009: 2024-04-03 23:35:51.781100 - step 62 of 96 - 500 active elements (0 deactivated)
07:08 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:08 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:08 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.83341584155725
07:08 DEBUG   opendrift.models.basemodel:2033:               10.268970864418103 <- longitude -> 10.709192204353899
07:08 DEBUG   opendrift.models.basemodel:2038:               -35.89178791891516   <- z ->   0.0
07:08 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:08 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-03 23:00:00 (before)
                2024-04-04 00:00:00 (after)
07:08 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-03 23:00:00) in space  (linearNDFast)
07:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:08 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 00:00:00) in space  (linearNDFast)
07:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:08 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-03 23:00:00, weight 0.40) and
                      after (2024-04-04 00:00:00, weight 0.60) in time
07:08 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.731040219628575 and -59.29081881547467 degrees.
07:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.731040219628575 and -59.29081881547467 degrees.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:08 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:08 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:08 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:08 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:08 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:08 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:08 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:08 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:08 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:08 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:08 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.733093 (min) 0.333201 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.237183 (min) 1.07446 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.2592 (min) -9.6667 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.25155 (min) 4.12494 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 102.051 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96954 (min) 6.22 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4696 (min) 34.434 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000172173 (min) 0.00114567 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:08 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:08 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:08 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:08 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:08 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
07:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 2 0 0 0 2 2]
07:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 0 3 3 3 0 0]
07:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  525.    0.]
 [   0.    0.    0.    0.    0.]
 [ 127.    0.    0.  694.    0.]
 [   6.    0. 1060.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:08 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:08 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1027957593122342
07:08 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:08 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:08 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:08 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:08 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
07:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
07:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [57, 0, 287, 156, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:08 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:08 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:08 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:08 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:08 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:08 INFO    opendrift.models.basemodel:2009: 2024-04-04 00:05:51.781100 - step 63 of 96 - 500 active elements (0 deactivated)
07:08 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:08 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:08 DEBUG   opendrift.models.basemodel:2028:               57.54713481034952 <- latitude  -> 57.83614729101057
07:08 DEBUG   opendrift.models.basemodel:2033:               10.257959175604194 <- longitude -> 10.710262843966438
07:08 DEBUG   opendrift.models.basemodel:2038:               -37.70570658477773   <- z ->   0.0
07:08 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:08 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:08 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:08 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:08 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 00:00:00 (before)
                2024-04-04 01:00:00 (after)
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:10 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:10 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 50x48x7) for time after (2024-04-04 01:00:00)
07:10 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 00:00:00) in space  (linearNDFast)
07:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:10 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 01:00:00) in space  (linearNDFast)
07:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 9 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:10 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 00:00:00, weight 0.90) and
                      after (2024-04-04 01:00:00, weight 0.10) in time
07:10 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.742051895394596 and -59.28974818611579 degrees.
07:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.742051895394596 and -59.28974818611579 degrees.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:10 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:10 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:10 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:10 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:10 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:10 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:10 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.767534 (min) 0.391347 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.23964 (min) 1.07813 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.0328 (min) -9.49496 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 2.85224 (min) 3.80108 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 102.645 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96571 (min) 6.22 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3241 (min) 34.4335 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000127109 (min) 0.00123339 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:10 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 8 elements to seafloor.
07:10 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:10 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 0 2 0]
07:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 3 0 3]
07:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 131.    0.    0.  709.    0.]
 [   6.    0. 1072.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:10 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:10 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.09783745746617252
07:10 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:10 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:10 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:10 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 43 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
07:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
07:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [58, 0, 284, 158, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:10 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:10 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:10 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:10 INFO    opendrift.models.basemodel:2009: 2024-04-04 00:35:51.781100 - step 64 of 96 - 500 active elements (0 deactivated)
07:10 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:10 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:10 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.83638548120322
07:10 DEBUG   opendrift.models.basemodel:2033:               10.246263742495021 <- longitude -> 10.705201317855137
07:10 DEBUG   opendrift.models.basemodel:2038:               -38.694589191933424   <- z ->   0.0
07:10 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:10 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 00:00:00 (before)
                2024-04-04 01:00:00 (after)
07:10 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 00:00:00) in space  (linearNDFast)
07:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:10 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 01:00:00) in space  (linearNDFast)
07:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:10 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 00:00:00, weight 0.40) and
                      after (2024-04-04 01:00:00, weight 0.60) in time
07:10 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.75374733091246 and -59.2948097010743 degrees.
07:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.75374733091246 and -59.2948097010743 degrees.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:10 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:10 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:10 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:10 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:10 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:10 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:10 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:10 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:10 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:10 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:10 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.778108 (min) 0.471203 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.24519 (min) 1.07413 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.301 (min) -9.77282 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.06355 (min) 3.9561 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 101.655 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96216 (min) 6.21999 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2782 (min) 34.4327 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -8.70021e-05 (min) 0.00113192 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:10 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:10 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:10 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:10 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:10 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
07:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
07:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
07:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 132.    0.    0.  721.    0.]
 [   6.    0. 1085.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:10 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:10 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10301029816383118
07:10 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:10 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:10 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:10 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:10 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:10 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:10 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
07:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
07:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [59, 0, 283, 158, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:10 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:10 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:10 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:10 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:10 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:10 INFO    opendrift.models.basemodel:2009: 2024-04-04 01:05:51.781100 - step 65 of 96 - 500 active elements (0 deactivated)
07:10 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:10 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:10 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.838981602210566
07:10 DEBUG   opendrift.models.basemodel:2033:               10.222754495977457 <- longitude -> 10.707794206211284
07:10 DEBUG   opendrift.models.basemodel:2038:               -36.81394207284532   <- z ->   0.0
07:10 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:10 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:10 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:10 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:10 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 01:00:00 (before)
                2024-04-04 02:00:00 (after)
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:12 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:12 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 50x50x7) for time after (2024-04-04 02:00:00)
07:12 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 01:00:00) in space  (linearNDFast)
07:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:12 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 02:00:00) in space  (linearNDFast)
07:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:12 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 01:00:00, weight 0.90) and
                      after (2024-04-04 02:00:00, weight 0.10) in time
07:12 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.77725658034546 and -59.292216813864705 degrees.
07:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.77725658034546 and -59.292216813864705 degrees.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:12 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:12 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.727785 (min) 0.483384 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.28257 (min) 1.06375 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.4506 (min) -9.90897 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.32151 (min) 4.31144 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 102.308 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9684 (min) 6.21814 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.279 (min) 34.4306 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000348525 (min) 0.0016607 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:12 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:12 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:12 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
07:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
07:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
07:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 134.    0.    0.  726.    0.]
 [   6.    0. 1090.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:12 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:12 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.10706957602553478
07:12 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:12 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:12 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:12 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
07:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
07:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [61, 0, 289, 150, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:12 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:12 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:12 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:12 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:12 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:12 INFO    opendrift.models.basemodel:2009: 2024-04-04 01:35:51.781100 - step 66 of 96 - 500 active elements (0 deactivated)
07:12 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:12 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:12 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84021080922252
07:12 DEBUG   opendrift.models.basemodel:2033:               10.203087612565747 <- longitude -> 10.704384721747301
07:12 DEBUG   opendrift.models.basemodel:2038:               -39.46744524204633   <- z ->   0.0
07:12 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:12 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 01:00:00 (before)
                2024-04-04 02:00:00 (after)
07:12 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 01:00:00) in space  (linearNDFast)
07:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:12 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 02:00:00) in space  (linearNDFast)
07:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:12 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 01:00:00, weight 0.40) and
                      after (2024-04-04 02:00:00, weight 0.60) in time
07:12 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.79692347226258 and -59.29562628311619 degrees.
07:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.79692347226258 and -59.29562628311619 degrees.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:12 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:12 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:12 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:12 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:12 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:12 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:12 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:12 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.777305 (min) 0.585734 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.280325 (min) 1.14343 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.3374 (min) -9.88097 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 4.04279 (min) 5.18901 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 101.206 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9646 (min) 6.22534 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5287 (min) 34.4368 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000473775 (min) 0.00192711 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:12 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:12 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:12 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:12 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:12 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
07:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
07:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
07:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  529.    0.]
 [   0.    0.    0.    0.    0.]
 [ 135.    0.    0.  736.    0.]
 [   6.    0. 1108.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:12 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:12 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11075755565424643
07:12 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:12 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:12 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:12 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 36 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:12 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 29
07:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 29 elements
07:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [61, 0, 304, 135, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:12 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:12 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:12 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:12 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:12 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:12 INFO    opendrift.models.basemodel:2009: 2024-04-04 02:05:51.781100 - step 67 of 96 - 500 active elements (0 deactivated)
07:12 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:12 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:12 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84845560589252
07:12 DEBUG   opendrift.models.basemodel:2033:               10.18315203657037 <- longitude -> 10.705147680746613
07:12 DEBUG   opendrift.models.basemodel:2038:               -39.3824479813223   <- z ->   0.0
07:12 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:12 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:12 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:12 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:12 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 02:00:00 (before)
                2024-04-04 03:00:00 (after)
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:14 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:14 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 49x53x7) for time after (2024-04-04 03:00:00)
07:14 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 02:00:00) in space  (linearNDFast)
07:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:14 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 03:00:00) in space  (linearNDFast)
07:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 18 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:14 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 02:00:00, weight 0.90) and
                      after (2024-04-04 03:00:00, weight 0.10) in time
07:14 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.81685904348493 and -59.29486333839226 degrees.
07:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.81685904348493 and -59.29486333839226 degrees.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:14 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:14 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.804118 (min) 0.606875 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.296898 (min) 1.20278 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.6903 (min) -9.83741 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 4.57421 (min) 5.76916 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 100.093 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.95795 (min) 6.22663 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5203 (min) 34.4295 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000530606 (min) 0.00202361 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:14 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:14 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
07:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
07:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
07:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  529.    0.]
 [   0.    0.    0.    0.    0.]
 [ 136.    0.    0.  749.    0.]
 [   6.    0. 1137.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:14 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:14 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11553396832122902
07:14 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:14 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:14 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:14 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 40
07:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 40 elements
07:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [62, 0, 331, 107, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:14 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:14 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:14 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:14 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:14 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:14 INFO    opendrift.models.basemodel:2009: 2024-04-04 02:35:51.781100 - step 68 of 96 - 500 active elements (0 deactivated)
07:14 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:14 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:14 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85635532100605
07:14 DEBUG   opendrift.models.basemodel:2033:               10.16123940030121 <- longitude -> 10.701095842581733
07:14 DEBUG   opendrift.models.basemodel:2038:               -38.44168848327656   <- z ->   0.0
07:14 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:14 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 02:00:00 (before)
                2024-04-04 03:00:00 (after)
07:14 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 02:00:00) in space  (linearNDFast)
07:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:14 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 03:00:00) in space  (linearNDFast)
07:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:14 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 02:00:00, weight 0.40) and
                      after (2024-04-04 03:00:00, weight 0.60) in time
07:14 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.83877168076043 and -59.298915170892435 degrees.
07:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.83877168076043 and -59.298915170892435 degrees.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:14 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:14 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:14 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:14 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:14 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:14 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:14 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:14 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.775695 (min) 0.684411 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.310084 (min) 1.20021 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.7036 (min) -10.0004 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 4.52435 (min) 5.27328 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 99.0834 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.93986 (min) 6.20026 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5204 (min) 34.4069 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000579156 (min) 0.00207466 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:14 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:14 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:14 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:14 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:14 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
07:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
07:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  530.    0.]
 [   0.    0.    0.    0.    0.]
 [ 138.    0.    0.  761.    0.]
 [   6.    0. 1177.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:14 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:14 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11396906471602265
07:14 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:14 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:14 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:14 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:14 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:14 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
07:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
07:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [63, 0, 338, 99, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:14 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:14 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:14 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:14 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:14 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:14 INFO    opendrift.models.basemodel:2009: 2024-04-04 03:05:51.781100 - step 69 of 96 - 500 active elements (0 deactivated)
07:14 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:14 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:14 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85937622742069
07:14 DEBUG   opendrift.models.basemodel:2033:               10.138659105442677 <- longitude -> 10.708602687974196
07:14 DEBUG   opendrift.models.basemodel:2038:               -38.51646185702073   <- z ->   0.0
07:14 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:14 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:14 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:14 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:14 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 03:00:00 (before)
                2024-04-04 04:00:00 (after)
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:16 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:16 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 48x56x7) for time after (2024-04-04 04:00:00)
07:16 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 03:00:00) in space  (linearNDFast)
07:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:16 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 04:00:00) in space  (linearNDFast)
07:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:16 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 03:00:00, weight 0.90) and
                      after (2024-04-04 04:00:00, weight 0.10) in time
07:16 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.861351974953365 and -59.29140832734612 degrees.
07:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.861351974953365 and -59.29140832734612 degrees.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:16 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:16 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.78382 (min) 0.654589 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.316725 (min) 1.12672 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.7805 (min) -10.154 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.93499 (min) 4.97006 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 97.9687 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.95053 (min) 6.21733 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5311 (min) 34.4167 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000305797 (min) 0.00223212 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:16 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:16 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:16 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:16 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
07:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 2]
07:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 0]
07:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  532.    0.]
 [   0.    0.    0.    0.    0.]
 [ 142.    0.    0.  773.    0.]
 [   6.    0. 1198.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:16 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:16 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11502402195468128
07:16 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:16 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:16 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 49
07:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 49 elements
07:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [65, 0, 365, 70, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:16 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:16 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:16 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:16 INFO    opendrift.models.basemodel:2009: 2024-04-04 03:35:51.781100 - step 70 of 96 - 500 active elements (0 deactivated)
07:16 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:16 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:16 DEBUG   opendrift.models.basemodel:2028:               57.54713481034952 <- latitude  -> 57.86166441831474
07:16 DEBUG   opendrift.models.basemodel:2033:               10.122091610280263 <- longitude -> 10.701374636291199
07:16 DEBUG   opendrift.models.basemodel:2038:               -39.51860358472966   <- z ->   0.0
07:16 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:16 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 03:00:00 (before)
                2024-04-04 04:00:00 (after)
07:16 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 03:00:00) in space  (linearNDFast)
07:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:16 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 04:00:00) in space  (linearNDFast)
07:16 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:16 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 03:00:00, weight 0.40) and
                      after (2024-04-04 04:00:00, weight 0.60) in time
07:16 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.87791948038949 and -59.29863637624092 degrees.
07:16 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.87791948038949 and -59.29863637624092 degrees.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:16 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:16 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:16 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:16 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:16 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:16 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:16 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:16 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:16 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.801621 (min) 0.70063 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.294941 (min) 1.12259 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.104 (min) -10.1779 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.07991 (min) 4.59868 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.01205 (min) 97.0388 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.93293 (min) 6.21962 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5217 (min) 34.4331 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000484145 (min) 0.0014038 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:16 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:16 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:16 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:16 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:16 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:16 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:16 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:16 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:16 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
07:16 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
07:16 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  532.    0.]
 [   0.    0.    0.    0.    0.]
 [ 146.    0.    0.  791.    0.]
 [   6.    0. 1247.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:16 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:16 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:16 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11717147225792961
07:16 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:16 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:16 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:16 DEBUG   opendrift.models.oceandrift:624: 40 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:16 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:16 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:16 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 22
07:16 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:16 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 22 elements
07:16 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:16 INFO    opendrift.models.chemicaldrift:1861: partitioning: [69, 0, 372, 59, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:16 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:16 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:16 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:16 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:16 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:16 INFO    opendrift.models.basemodel:2009: 2024-04-04 04:05:51.781100 - step 71 of 96 - 500 active elements (0 deactivated)
07:16 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:16 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:16 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85975250521779
07:16 DEBUG   opendrift.models.basemodel:2033:               10.104887669765077 <- longitude -> 10.697001581309742
07:16 DEBUG   opendrift.models.basemodel:2038:               -39.5981505771189   <- z ->   0.0
07:16 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:16 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:16 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:16 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:16 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:16 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 04:00:00 (before)
                2024-04-04 05:00:00 (after)
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:18 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:18 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 47x58x7) for time after (2024-04-04 05:00:00)
07:18 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 04:00:00) in space  (linearNDFast)
07:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:18 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 05:00:00) in space  (linearNDFast)
07:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:18 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 04:00:00, weight 0.90) and
                      after (2024-04-04 05:00:00, weight 0.10) in time
07:18 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.895123419465946 and -59.30300943995038 degrees.
07:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.895123419465946 and -59.30300943995038 degrees.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:18 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:18 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:18 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:18 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:18 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:18 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:18 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.794604 (min) 0.659522 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.301201 (min) 1.04586 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.4549 (min) -10.352 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 2.30101 (min) 4.18785 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.00337 (min) 96.0836 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.93047 (min) 6.11945 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5787 (min) 34.2863 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000369339 (min) 0.00178758 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:18 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:18 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:18 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:18 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
07:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
07:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  533.    0.]
 [   0.    0.    0.    0.    0.]
 [ 148.    0.    0.  802.    0.]
 [   6.    0. 1269.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:18 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:18 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1205070345412602
07:18 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:18 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:18 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:18 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 37 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 49
07:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 49 elements
07:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [70, 0, 404, 26, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:18 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:18 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:18 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:18 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:18 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:18 INFO    opendrift.models.basemodel:2009: 2024-04-04 04:35:51.781100 - step 72 of 96 - 500 active elements (0 deactivated)
07:18 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:18 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:18 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85805067429791
07:18 DEBUG   opendrift.models.basemodel:2033:               10.084807319308718 <- longitude -> 10.703330131302172
07:18 DEBUG   opendrift.models.basemodel:2038:               -40.55071518619471   <- z ->   0.0
07:18 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:18 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 04:00:00 (before)
                2024-04-04 05:00:00 (after)
07:18 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 04:00:00) in space  (linearNDFast)
07:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:18 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 05:00:00) in space  (linearNDFast)
07:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:18 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 04:00:00, weight 0.40) and
                      after (2024-04-04 05:00:00, weight 0.60) in time
07:18 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.91520378153531 and -59.29668088401037 degrees.
07:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.91520378153531 and -59.29668088401037 degrees.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:18 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:18 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:18 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:18 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:18 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:18 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:18 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:18 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:18 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:18 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:18 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:18 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.839154 (min) 0.536282 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.312578 (min) 1.03337 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.7962 (min) -10.5599 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.55479 (min) 3.59351 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.00358 (min) 95.5101 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9212 (min) 6.20769 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5377 (min) 34.4159 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000179826 (min) 0.00177864 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:18 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:18 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:18 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:18 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:18 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:18 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:18 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:18 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:18 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
07:18 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
07:18 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  535.    0.]
 [   0.    0.    0.    0.    0.]
 [ 149.    0.    0.  817.    0.]
 [   6.    0. 1318.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:18 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:18 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:18 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.12403130684788533
07:18 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:18 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:18 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:18 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:18 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:18 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:18 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
07:18 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:18 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
07:18 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:18 INFO    opendrift.models.chemicaldrift:1861: partitioning: [69, 0, 406, 25, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:18 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:18 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:18 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:18 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:18 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:18 INFO    opendrift.models.basemodel:2009: 2024-04-04 05:05:51.781100 - step 73 of 96 - 500 active elements (0 deactivated)
07:18 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:18 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:18 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.856384028048026
07:18 DEBUG   opendrift.models.basemodel:2033:               10.065522024864043 <- longitude -> 10.703369136280974
07:18 DEBUG   opendrift.models.basemodel:2038:               -41.39011323201359   <- z ->   0.0
07:18 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:18 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:18 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:18 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:18 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:18 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 05:00:00 (before)
                2024-04-04 06:00:00 (after)
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:20 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:20 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 48x61x7) for time after (2024-04-04 06:00:00)
07:20 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 05:00:00) in space  (linearNDFast)
07:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:20 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 06:00:00) in space  (linearNDFast)
07:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:20 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 05:00:00, weight 0.90) and
                      after (2024-04-04 06:00:00, weight 0.10) in time
07:20 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.934489068542646 and -59.29664187606002 degrees.
07:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.934489068542646 and -59.29664187606002 degrees.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:20 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:20 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:20 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:20 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:20 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:20 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:20 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.823948 (min) 0.579441 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.32021 (min) 0.93021 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.1691 (min) -10.6743 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 0.96732 (min) 3.08846 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.02087 (min) 95.448 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9266 (min) 6.18672 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3739 (min) 34.3813 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000198324 (min) 0.00173082 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:20 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:20 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:20 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:20 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 2 2]
07:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 0 0]
07:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  536.    0.]
 [   0.    0.    0.    0.    0.]
 [ 155.    0.    0.  833.    0.]
 [   6.    0. 1337.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:20 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:20 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.12908059564897856
07:20 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:20 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:20 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:20 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 3 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
07:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
07:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [74, 0, 404, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:20 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:20 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:20 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:20 INFO    opendrift.models.basemodel:2009: 2024-04-04 05:35:51.781100 - step 74 of 96 - 500 active elements (0 deactivated)
07:20 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:20 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:20 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85472249885164
07:20 DEBUG   opendrift.models.basemodel:2033:               10.046150163926805 <- longitude -> 10.704323270132889
07:20 DEBUG   opendrift.models.basemodel:2038:               -41.94559386353576   <- z ->   0.0
07:20 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:20 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 05:00:00 (before)
                2024-04-04 06:00:00 (after)
07:20 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 05:00:00) in space  (linearNDFast)
07:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:20 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 06:00:00) in space  (linearNDFast)
07:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:20 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 05:00:00, weight 0.40) and
                      after (2024-04-04 06:00:00, weight 0.60) in time
07:20 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.95386093130027 and -59.29568774617904 degrees.
07:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.95386093130027 and -59.29568774617904 degrees.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:20 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:20 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:20 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:20 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:20 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:20 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:20 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:20 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:20 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:20 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:20 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.845225 (min) 0.523929 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.298506 (min) 0.945265 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.6905 (min) -10.8504 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.04979 (min) 3.0851 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.05373 (min) 94.8093 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91093 (min) 6.1831 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5549 (min) 34.378 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000243345 (min) 0.00170979 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:20 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:20 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:20 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
07:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 0]
07:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3]
07:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  538.    0.]
 [   0.    0.    0.    0.    0.]
 [ 158.    0.    0.  850.    0.]
 [   6.    0. 1358.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:20 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:20 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1383626066361115
07:20 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:20 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:20 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:20 DEBUG   opendrift.models.oceandrift:624: 38 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:20 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
07:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
07:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [75, 0, 403, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:20 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:20 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:20 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:20 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:20 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:20 INFO    opendrift.models.basemodel:2009: 2024-04-04 06:05:51.781100 - step 75 of 96 - 500 active elements (0 deactivated)
07:20 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:20 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:20 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.85305434610984
07:20 DEBUG   opendrift.models.basemodel:2033:               10.029719187910676 <- longitude -> 10.701167605634224
07:20 DEBUG   opendrift.models.basemodel:2038:               -42.888384094153274   <- z ->   0.0
07:20 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:20 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:20 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:20 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:20 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 06:00:00 (before)
                2024-04-04 07:00:00 (after)
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:22 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:22 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 48x64x7) for time after (2024-04-04 07:00:00)
07:22 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 06:00:00) in space  (linearNDFast)
07:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 07:00:00) in space  (linearNDFast)
07:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:22 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 06:00:00, weight 0.90) and
                      after (2024-04-04 07:00:00, weight 0.10) in time
07:22 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.97029190734049 and -59.29884341908909 degrees.
07:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.97029190734049 and -59.29884341908909 degrees.
07:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:22 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:22 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:22 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:22 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:22 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:22 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:22 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:22 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:22 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:22 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:22 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:22 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.863263 (min) 0.514824 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.347681 (min) 0.862402 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -14.122 (min) -10.8972 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.2584 (min) 3.13344 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.04618 (min) 97.0242 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.89882 (min) 6.19799 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5451 (min) 34.402 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000228238 (min) 0.00205762 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:22 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:22 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:22 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:22 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:22 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 2]
07:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 0]
07:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  538.    0.]
 [   0.    0.    0.    0.    0.]
 [ 165.    0.    0.  862.    0.]
 [   6.    0. 1372.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:22 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:23 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14668509571627966
07:23 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:23 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:23 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
07:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
07:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [82, 0, 396, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:23 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:23 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:23 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:23 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:23 INFO    opendrift.models.basemodel:2009: 2024-04-04 06:35:51.781100 - step 76 of 96 - 500 active elements (0 deactivated)
07:23 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:23 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:23 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.851345166082794
07:23 DEBUG   opendrift.models.basemodel:2033:               10.014717990299438 <- longitude -> 10.704600328743004
07:23 DEBUG   opendrift.models.basemodel:2038:               -42.84332012041127   <- z ->   0.0
07:23 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:23 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:23 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:23 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 06:00:00 (before)
                2024-04-04 07:00:00 (after)
07:23 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 06:00:00) in space  (linearNDFast)
07:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:23 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 07:00:00) in space  (linearNDFast)
07:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:23 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 06:00:00, weight 0.40) and
                      after (2024-04-04 07:00:00, weight 0.60) in time
07:23 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.98529310034215 and -59.29541069530937 degrees.
07:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.98529310034215 and -59.29541069530937 degrees.
07:23 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:23 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:23 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:23 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:23 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:23 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:23 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:23 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:23 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:23 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:23 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:23 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:23 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:23 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:23 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:23 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:23 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:23 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:23 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.871006 (min) 0.434908 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.317792 (min) 0.85494 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -14.21 (min) -10.9052 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 1.66353 (min) 3.32227 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.02161 (min) 98.0473 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91039 (min) 6.21718 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5347 (min) 34.4287 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000222588 (min) 0.00199959 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:23 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:23 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:23 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:23 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:23 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
07:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 0 2 2 2]
07:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 3 0 0 0]
07:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  539.    0.]
 [   0.    0.    0.    0.    0.]
 [ 174.    0.    0.  873.    0.]
 [   6.    0. 1383.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:23 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:23 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1504865230717096
07:23 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:23 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:23 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:23 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 39 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:23 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 11
07:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 11 elements
07:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [90, 0, 388, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:23 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:23 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:23 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:23 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:23 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:23 INFO    opendrift.models.basemodel:2009: 2024-04-04 07:05:51.781100 - step 77 of 96 - 500 active elements (0 deactivated)
07:23 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:23 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:23 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84949304725316
07:23 DEBUG   opendrift.models.basemodel:2033:               9.9981320483668 <- longitude -> 10.711269211942694
07:23 DEBUG   opendrift.models.basemodel:2038:               -43.43586002450678   <- z ->   0.0
07:23 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:23 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:23 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:23 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:23 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 07:00:00 (before)
                2024-04-04 08:00:00 (after)
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:25 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:25 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 49x66x7) for time after (2024-04-04 08:00:00)
07:25 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 07:00:00) in space  (linearNDFast)
07:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:25 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 08:00:00) in space  (linearNDFast)
07:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:25 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 07:00:00, weight 0.90) and
                      after (2024-04-04 08:00:00, weight 0.10) in time
07:25 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.0018790351986 and -59.28874181020075 degrees.
07:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.0018790351986 and -59.28874181020075 degrees.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:25 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:25 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:25 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:25 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:25 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:25 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:25 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.865679 (min) 0.403625 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.349852 (min) 0.925609 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -14.2271 (min) -10.9519 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 2.04718 (min) 3.66862 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 9.00484 (min) 99.5789 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.89122 (min) 6.22413 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4257 (min) 34.4351 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000216894 (min) 0.00189457 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:25 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:25 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:25 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2]
07:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0]
07:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  540.    0.]
 [   0.    0.    0.    0.    0.]
 [ 177.    0.    0.  883.    0.]
 [   6.    0. 1394.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:25 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:25 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.15336829444816696
07:25 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:25 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:25 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
07:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
07:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [92, 0, 386, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:25 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:25 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:25 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:25 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:25 INFO    opendrift.models.basemodel:2009: 2024-04-04 07:35:51.781100 - step 78 of 96 - 500 active elements (0 deactivated)
07:25 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:25 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:25 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84751315441483
07:25 DEBUG   opendrift.models.basemodel:2033:               9.979739212072984 <- longitude -> 10.713576513499731
07:25 DEBUG   opendrift.models.basemodel:2038:               -44.57230119244188   <- z ->   0.0
07:25 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:25 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 07:00:00 (before)
                2024-04-04 08:00:00 (after)
07:25 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 07:00:00) in space  (linearNDFast)
07:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:25 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 08:00:00) in space  (linearNDFast)
07:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:25 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 07:00:00, weight 0.40) and
                      after (2024-04-04 08:00:00, weight 0.60) in time
07:25 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.02027188939668 and -59.28643450092666 degrees.
07:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.02027188939668 and -59.28643450092666 degrees.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:25 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:25 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:25 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:25 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:25 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:25 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:25 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:25 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:25 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:25 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:25 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.881952 (min) 0.380831 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.343078 (min) 0.839831 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -14.0441 (min) -10.7843 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 2.41685 (min) 4.57296 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.90353 (min) 98.7737 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.90858 (min) 6.22722 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5204 (min) 34.433 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000264234 (min) 0.00192624 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:25 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:25 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:25 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0 2 2]
07:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3 0 0]
07:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  543.    0.]
 [   0.    0.    0.    0.    0.]
 [ 181.    0.    0.  894.    0.]
 [   6.    0. 1406.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:25 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:25 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.15106705740888052
07:25 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:25 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:25 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 34 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 35 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:25 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:25 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:25 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
07:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
07:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [93, 0, 385, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:25 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:25 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:25 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:25 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:25 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:25 INFO    opendrift.models.basemodel:2009: 2024-04-04 08:05:51.781100 - step 79 of 96 - 500 active elements (0 deactivated)
07:25 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:25 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:25 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.845445993496945
07:25 DEBUG   opendrift.models.basemodel:2033:               9.962873429263851 <- longitude -> 10.711704590884775
07:25 DEBUG   opendrift.models.basemodel:2038:               -45.495511675584794   <- z ->   0.0
07:25 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:25 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:25 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:25 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:25 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 08:00:00 (before)
                2024-04-04 09:00:00 (after)
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:27 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:27 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 49x69x7) for time after (2024-04-04 09:00:00)
07:27 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 08:00:00) in space  (linearNDFast)
07:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:27 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 09:00:00) in space  (linearNDFast)
07:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:27 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 08:00:00, weight 0.90) and
                      after (2024-04-04 09:00:00, weight 0.10) in time
07:27 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.037137670919925 and -59.2883064184218 degrees.
07:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.037137670919925 and -59.2883064184218 degrees.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:27 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:27 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.873602 (min) 0.316896 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.349605 (min) 0.822744 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.8121 (min) -10.4134 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 2.82871 (min) 5.41279 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.89347 (min) 100.372 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.89305 (min) 6.22969 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4193 (min) 34.4385 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000226875 (min) 0.00180756 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:27 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:27 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
07:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
07:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
07:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  543.    0.]
 [   0.    0.    0.    0.    0.]
 [ 183.    0.    0.  900.    0.]
 [   6.    0. 1415.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:27 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:27 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1484307799368572
07:27 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:27 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:27 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 33 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
07:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
07:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [95, 0, 383, 22, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:27 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:27 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:27 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:27 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:27 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:27 INFO    opendrift.models.basemodel:2009: 2024-04-04 08:35:51.781100 - step 80 of 96 - 500 active elements (0 deactivated)
07:27 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:27 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:27 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.843313447497096
07:27 DEBUG   opendrift.models.basemodel:2033:               9.949775312421508 <- longitude -> 10.707173434047533
07:27 DEBUG   opendrift.models.basemodel:2038:               -46.2483701131786   <- z ->   0.0
07:27 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:27 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 08:00:00 (before)
                2024-04-04 09:00:00 (after)
07:27 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 08:00:00) in space  (linearNDFast)
07:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:27 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 09:00:00) in space  (linearNDFast)
07:27 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:27 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 08:00:00, weight 0.40) and
                      after (2024-04-04 09:00:00, weight 0.60) in time
07:27 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05023579069973 and -59.29283758819911 degrees.
07:27 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.05023579069973 and -59.29283758819911 degrees.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:27 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:27 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:27 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:27 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:27 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:27 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:27 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:27 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:27 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.834883 (min) 0.281549 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.3504 (min) 0.852221 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.418 (min) -10.4963 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.36526 (min) 5.98703 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.86967 (min) 99.3752 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.90191 (min) 6.22697 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5516 (min) 34.4396 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000372922 (min) 0.00181136 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:27 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:27 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:27 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:27 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:27 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:27 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:27 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:27 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:27 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0]
07:27 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3]
07:27 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  544.    0.]
 [   0.    0.    0.    0.    0.]
 [ 186.    0.    0.  907.    0.]
 [   6.    0. 1422.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:27 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:27 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:27 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.145449633237948
07:27 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:27 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:27 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 29 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:27 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:27 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
07:27 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:27 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
07:27 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:27 INFO    opendrift.models.chemicaldrift:1861: partitioning: [97, 0, 379, 24, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:27 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:27 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:27 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:27 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:27 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:27 INFO    opendrift.models.basemodel:2009: 2024-04-04 09:05:51.781100 - step 81 of 96 - 500 active elements (0 deactivated)
07:27 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:27 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:27 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84118777449489
07:27 DEBUG   opendrift.models.basemodel:2033:               9.933919642038763 <- longitude -> 10.701681028317314
07:27 DEBUG   opendrift.models.basemodel:2038:               -46.99198546305768   <- z ->   0.0
07:27 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:27 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:27 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:27 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:27 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:27 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 09:00:00 (before)
                2024-04-04 10:00:00 (after)
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:29 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:29 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 51x71x7) for time after (2024-04-04 10:00:00)
07:29 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 09:00:00) in space  (linearNDFast)
07:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:29 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 10:00:00) in space  (linearNDFast)
07:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:29 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 09:00:00, weight 0.90) and
                      after (2024-04-04 10:00:00, weight 0.10) in time
07:29 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06609146320278 and -59.29832998848395 degrees.
07:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.06609146320278 and -59.29832998848395 degrees.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:29 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:29 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.831163 (min) 0.242047 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.369145 (min) 0.892768 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.0543 (min) -10.3033 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.77147 (min) 6.48371 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 98.9392 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.90676 (min) 6.2294 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4592 (min) 34.4382 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000384809 (min) 0.00185031 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:29 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:29 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
07:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
07:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
07:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  545.    0.]
 [   0.    0.    0.    0.    0.]
 [ 187.    0.    0.  915.    0.]
 [   6.    0. 1429.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:29 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:29 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14256071621516964
07:29 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:29 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:29 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:29 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 31 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
07:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
07:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [97, 0, 375, 28, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:29 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:29 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:29 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:29 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:29 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:29 INFO    opendrift.models.basemodel:2009: 2024-04-04 09:35:51.781100 - step 82 of 96 - 500 active elements (0 deactivated)
07:29 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:29 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:29 DEBUG   opendrift.models.basemodel:2028:               57.54713481034952 <- latitude  -> 57.84054815155953
07:29 DEBUG   opendrift.models.basemodel:2033:               9.918307686869985 <- longitude -> 10.700024713284094
07:29 DEBUG   opendrift.models.basemodel:2038:               -47.17233494048516   <- z ->   0.0
07:29 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:29 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 09:00:00 (before)
                2024-04-04 10:00:00 (after)
07:29 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 09:00:00) in space  (linearNDFast)
07:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 10:00:00) in space  (linearNDFast)
07:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:29 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 09:00:00, weight 0.40) and
                      after (2024-04-04 10:00:00, weight 0.60) in time
07:29 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08170340562479 and -59.29998630681514 degrees.
07:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.08170340562479 and -59.29998630681514 degrees.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:29 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:29 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:29 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:29 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:29 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:29 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:29 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:29 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.856922 (min) 0.254235 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.370171 (min) 0.90955 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.0151 (min) -10.2214 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.87721 (min) 6.66407 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 98.4213 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91255 (min) 6.22709 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5127 (min) 34.4348 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000496035 (min) 0.00189616 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:29 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:29 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:29 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:29 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:29 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
07:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2]
07:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0]
07:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  547.    0.]
 [   0.    0.    0.    0.    0.]
 [ 190.    0.    0.  921.    0.]
 [   6.    0. 1432.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:29 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:29 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14075317837624068
07:29 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:29 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:29 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:29 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
07:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
07:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [98, 0, 370, 32, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:29 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:29 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:29 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:29 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:29 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:29 INFO    opendrift.models.basemodel:2009: 2024-04-04 10:05:51.781100 - step 83 of 96 - 500 active elements (0 deactivated)
07:29 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:29 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:29 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.84589454489898
07:29 DEBUG   opendrift.models.basemodel:2033:               9.905920300198007 <- longitude -> 10.69799025692189
07:29 DEBUG   opendrift.models.basemodel:2038:               -47.933967886547336   <- z ->   0.0
07:29 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:29 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:29 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:29 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:29 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 10:00:00 (before)
                2024-04-04 11:00:00 (after)
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:31 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:31 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 51x73x7) for time after (2024-04-04 11:00:00)
07:31 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 10:00:00) in space  (linearNDFast)
07:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:31 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 11:00:00) in space  (linearNDFast)
07:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:31 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 10:00:00, weight 0.90) and
                      after (2024-04-04 11:00:00, weight 0.10) in time
07:31 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.094090809522825 and -59.302020752704266 degrees.
07:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.094090809522825 and -59.302020752704266 degrees.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:31 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:31 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.808792 (min) 0.276508 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.377074 (min) 0.920193 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.0711 (min) -10.191 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.91702 (min) 6.82526 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 98.2706 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.91781 (min) 6.22668 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3734 (min) 34.4377 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000592594 (min) 0.00187711 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:31 DEBUG   opendrift.models.basemodel:688: 1 elements hit coastline, moving back to water
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:31 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:31 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
07:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
07:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  547.    0.]
 [   0.    0.    0.    0.    0.]
 [ 193.    0.    0.  928.    0.]
 [   6.    0. 1437.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:31 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:31 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14299020345145316
07:31 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:31 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:31 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 28 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
07:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
07:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [101, 0, 363, 36, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:31 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:31 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:31 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:31 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:31 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:31 INFO    opendrift.models.basemodel:2009: 2024-04-04 10:35:51.781100 - step 84 of 96 - 500 active elements (0 deactivated)
07:31 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:31 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:31 DEBUG   opendrift.models.basemodel:2028:               57.54713481034951 <- latitude  -> 57.8471895346962
07:31 DEBUG   opendrift.models.basemodel:2033:               9.894693429028008 <- longitude -> 10.696956206735646
07:31 DEBUG   opendrift.models.basemodel:2038:               -48.02813911794894   <- z ->   0.0
07:31 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:31 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 10:00:00 (before)
                2024-04-04 11:00:00 (after)
07:31 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 10:00:00) in space  (linearNDFast)
07:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:31 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 11:00:00) in space  (linearNDFast)
07:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:31 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 10:00:00, weight 0.40) and
                      after (2024-04-04 11:00:00, weight 0.60) in time
07:31 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.10531767992825 and -59.30305481825755 degrees.
07:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.10531767992825 and -59.30305481825755 degrees.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:31 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:31 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:31 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:31 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:31 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:31 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:31 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:31 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.849032 (min) 0.201603 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.37775 (min) 0.956068 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.4975 (min) -10.2072 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.8769 (min) 6.77272 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 101.438 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.94024 (min) 6.22175 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3516 (min) 34.437 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.00044671 (min) 0.00180792 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:31 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:31 DEBUG   opendrift.models.basemodel:688: 1 elements hit coastline, moving back to water
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:31 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
07:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2 0 0 0]
07:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0 3 3 3]
07:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  552.    0.]
 [   0.    0.    0.    0.    0.]
 [ 196.    0.    0.  936.    0.]
 [   6.    0. 1441.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:31 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:31 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1453458236606646
07:31 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:31 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:31 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:31 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:31 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:31 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
07:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
07:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [99, 0, 363, 38, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:31 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:31 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:31 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:31 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:31 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:31 INFO    opendrift.models.basemodel:2009: 2024-04-04 11:05:51.781100 - step 85 of 96 - 500 active elements (0 deactivated)
07:31 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:31 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:31 DEBUG   opendrift.models.basemodel:2028:               57.54462596479735 <- latitude  -> 57.8451626847533
07:31 DEBUG   opendrift.models.basemodel:2033:               9.885387198047537 <- longitude -> 10.697078493351851
07:31 DEBUG   opendrift.models.basemodel:2038:               -48.041025516370695   <- z ->   0.0
07:31 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:31 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:31 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:31 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:31 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 11:00:00 (before)
                2024-04-04 12:00:00 (after)
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:33 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:33 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 52x74x7) for time after (2024-04-04 12:00:00)
07:33 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 11:00:00) in space  (linearNDFast)
07:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:33 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 12:00:00) in space  (linearNDFast)
07:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:33 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 11:00:00, weight 0.90) and
                      after (2024-04-04 12:00:00, weight 0.10) in time
07:33 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.11462390774658 and -59.30293252381627 degrees.
07:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.11462390774658 and -59.30293252381627 degrees.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:33 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:33 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.811266 (min) 0.299914 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.378721 (min) 1.00876 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.7816 (min) -10.6039 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 3.90337 (min) 6.84296 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 100.325 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.92649 (min) 6.22179 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3676 (min) 34.4359 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000484952 (min) 0.00187274 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:33 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:33 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 2 2]
07:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 0 0]
07:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  553.    0.]
 [   0.    0.    0.    0.    0.]
 [ 202.    0.    0.  943.    0.]
 [   6.    0. 1451.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:33 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:33 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.15132030419835452
07:33 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:33 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:33 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 30 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 32 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 25 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
07:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
07:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [104, 0, 355, 41, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:33 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:33 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:33 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:33 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:33 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:33 INFO    opendrift.models.basemodel:2009: 2024-04-04 11:35:51.781100 - step 86 of 96 - 500 active elements (0 deactivated)
07:33 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:33 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:33 DEBUG   opendrift.models.basemodel:2028:               57.54202046660592 <- latitude  -> 57.84465999911643
07:33 DEBUG   opendrift.models.basemodel:2033:               9.876167682120329 <- longitude -> 10.693877026078695
07:33 DEBUG   opendrift.models.basemodel:2038:               -47.84839948699903   <- z ->   0.0
07:33 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:33 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 11:00:00 (before)
                2024-04-04 12:00:00 (after)
07:33 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 11:00:00) in space  (linearNDFast)
07:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:33 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 12:00:00) in space  (linearNDFast)
07:33 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:33 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 11:00:00, weight 0.40) and
                      after (2024-04-04 12:00:00, weight 0.60) in time
07:33 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.12384342515452 and -59.306133995486455 degrees.
07:33 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.12384342515452 and -59.306133995486455 degrees.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:33 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:33 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:33 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:33 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:33 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:33 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:33 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:33 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:33 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.83931 (min) 0.28159 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.376647 (min) 1.07427 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.4049 (min) -10.4031 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 4.35884 (min) 7.47154 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 99.4384 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9397 (min) 6.22001 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3484 (min) 34.4339 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000485424 (min) 0.00181717 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:33 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:33 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:33 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:33 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:33 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:33 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:33 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:33 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2]
07:33 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0]
07:33 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  553.    0.]
 [   0.    0.    0.    0.    0.]
 [ 205.    0.    0.  955.    0.]
 [   6.    0. 1461.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:33 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:33 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:33 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14668461557403675
07:33 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:33 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:33 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:33 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 27 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:33 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:33 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:33 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:33 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
07:33 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:33 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
07:33 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:33 INFO    opendrift.models.chemicaldrift:1861: partitioning: [107, 0, 351, 42, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:33 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:33 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:33 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:33 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:33 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:33 INFO    opendrift.models.basemodel:2009: 2024-04-04 12:05:51.781100 - step 87 of 96 - 500 active elements (0 deactivated)
07:33 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:33 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:33 DEBUG   opendrift.models.basemodel:2028:               57.53953793163326 <- latitude  -> 57.84810988228303
07:33 DEBUG   opendrift.models.basemodel:2033:               9.866528928787286 <- longitude -> 10.68965508981272
07:33 DEBUG   opendrift.models.basemodel:2038:               -48.45017218860581   <- z ->   0.0
07:33 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:33 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:33 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:33 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:33 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:33 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 12:00:00 (before)
                2024-04-04 13:00:00 (after)
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:35 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:35 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 53x76x7) for time after (2024-04-04 13:00:00)
07:35 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 12:00:00) in space  (linearNDFast)
07:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:35 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 13:00:00) in space  (linearNDFast)
07:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 13 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:35 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 12:00:00, weight 0.90) and
                      after (2024-04-04 13:00:00, weight 0.10) in time
07:35 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.1334821737736 and -59.31035593297082 degrees.
07:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.1334821737736 and -59.31035593297082 degrees.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:35 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:35 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.846368 (min) 0.342687 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.386522 (min) 1.10439 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -13.0227 (min) -10.0539 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 4.8203 (min) 8.09055 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 100.183 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9528 (min) 6.22 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4226 (min) 34.4291 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000406438 (min) 0.00181725 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:35 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:35 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:35 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:35 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:35 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:35 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
07:35 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2]
07:35 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0]
07:35 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  553.    0.]
 [   0.    0.    0.    0.    0.]
 [ 211.    0.    0.  962.    0.]
 [   6.    0. 1467.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:35 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:35 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:35 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.14342128645460284
07:35 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:35 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:35 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:35 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
07:35 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
07:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:35 INFO    opendrift.models.chemicaldrift:1861: partitioning: [113, 0, 342, 45, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:35 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:35 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:35 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:35 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:35 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:35 INFO    opendrift.models.basemodel:2009: 2024-04-04 12:35:51.781100 - step 88 of 96 - 500 active elements (0 deactivated)
07:35 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:35 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:35 DEBUG   opendrift.models.basemodel:2028:               57.53706955174252 <- latitude  -> 57.84923910994504
07:35 DEBUG   opendrift.models.basemodel:2033:               9.8549313731142 <- longitude -> 10.691362329397878
07:35 DEBUG   opendrift.models.basemodel:2038:               -49.64351450908346   <- z ->   0.0
07:35 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:35 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 12:00:00 (before)
                2024-04-04 13:00:00 (after)
07:35 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 12:00:00) in space  (linearNDFast)
07:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:35 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 13:00:00) in space  (linearNDFast)
07:35 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:35 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 12:00:00, weight 0.40) and
                      after (2024-04-04 13:00:00, weight 0.60) in time
07:35 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.145079728072815 and -59.30864868220628 degrees.
07:35 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.145079728072815 and -59.30864868220628 degrees.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:35 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:35 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:35 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:35 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:35 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:35 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:35 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:35 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:35 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:35 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:35 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:35 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:35 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.844488 (min) 0.377517 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.409735 (min) 1.14835 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.559 (min) -9.46637 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.21394 (min) 8.58762 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 99.7407 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.95076 (min) 6.22 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3758 (min) 34.4291 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000586688 (min) 0.00182232 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:35 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:35 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:35 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:35 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:35 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:35 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:35 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
07:35 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
07:35 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
07:35 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  554.    0.]
 [   0.    0.    0.    0.    0.]
 [ 213.    0.    0.  968.    0.]
 [   6.    0. 1470.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:35 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:35 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:35 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:35 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:35 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.13936510127381682
07:35 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:35 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:35 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:35 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:35 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 24 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:35 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:36 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:36 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:36 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
07:36 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:36 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
07:36 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:36 INFO    opendrift.models.chemicaldrift:1861: partitioning: [114, 0, 338, 48, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:36 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:36 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:36 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:36 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:36 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:36 INFO    opendrift.models.basemodel:2009: 2024-04-04 13:05:51.781100 - step 89 of 96 - 500 active elements (0 deactivated)
07:36 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:36 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:36 DEBUG   opendrift.models.basemodel:2028:               57.534702875453355 <- latitude  -> 57.852934442676975
07:36 DEBUG   opendrift.models.basemodel:2033:               9.843127728625324 <- longitude -> 10.685170453338998
07:36 DEBUG   opendrift.models.basemodel:2038:               -50.04629009493171   <- z ->   0.0
07:36 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:36 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:36 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:36 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:36 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:36 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:36 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:36 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:36 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 13:00:00 (before)
                2024-04-04 14:00:00 (after)
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:38 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:38 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 55x79x8) for time after (2024-04-04 14:00:00)
07:38 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 13:00:00) in space  (linearNDFast)
07:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:38 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 14:00:00) in space  (linearNDFast)
07:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 12 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
07:38 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 13:00:00, weight 0.90) and
                      after (2024-04-04 14:00:00, weight 0.10) in time
07:38 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.15688338369259 and -59.31484056491777 degrees.
07:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.15688338369259 and -59.31484056491777 degrees.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:38 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:38 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:38 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:38 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:38 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:38 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:38 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.851648 (min) 0.496226 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.396583 (min) 1.17969 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -12.1972 (min) -8.91546 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.48223 (min) 9.02711 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 99.7716 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.9592 (min) 6.22 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3383 (min) 34.4295 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000510782 (min) 0.00214473 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:38 DEBUG   opendrift.models.basemodel:688: 1 elements hit coastline, moving back to water
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:38 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:38 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
07:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
07:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  554.    0.]
 [   0.    0.    0.    0.    0.]
 [ 217.    0.    0.  972.    0.]
 [   6.    0. 1472.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:38 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:38 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.13671200470146094
07:38 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:38 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:38 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 22 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
07:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
07:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [118, 0, 336, 46, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:38 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:38 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:38 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:38 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:38 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:38 INFO    opendrift.models.basemodel:2009: 2024-04-04 13:35:51.781100 - step 90 of 96 - 500 active elements (0 deactivated)
07:38 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:38 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:38 DEBUG   opendrift.models.basemodel:2028:               57.53517281421093 <- latitude  -> 57.85595952755485
07:38 DEBUG   opendrift.models.basemodel:2033:               9.830612814857833 <- longitude -> 10.681952879867296
07:38 DEBUG   opendrift.models.basemodel:2038:               -50.631516042120325   <- z ->   0.0
07:38 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:38 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 13:00:00 (before)
                2024-04-04 14:00:00 (after)
07:38 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 13:00:00) in space  (linearNDFast)
07:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:38 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 14:00:00) in space  (linearNDFast)
07:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:38 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 13:00:00, weight 0.40) and
                      after (2024-04-04 14:00:00, weight 0.60) in time
07:38 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.16939829640936 and -59.31805814375825 degrees.
07:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.16939829640936 and -59.31805814375825 degrees.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:38 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:38 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:38 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:38 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:38 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:38 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:38 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:38 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:38 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:38 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:38 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.832995 (min) 0.418931 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.384293 (min) 1.23452 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.8483 (min) -8.94288 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.70409 (min) 9.286 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 99.564 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96885 (min) 6.21769 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.3951 (min) 34.427 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000455278 (min) 0.00171344 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:38 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:38 DEBUG   opendrift.models.basemodel:688: 1 elements hit coastline, moving back to water
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:38 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2 2 2 2]
07:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0 0 0 0]
07:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  556.    0.]
 [   0.    0.    0.    0.    0.]
 [ 222.    0.    0.  977.    0.]
 [   6.    0. 1479.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:38 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:38 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.13576063109079495
07:38 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:38 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:38 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 26 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:38 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:38 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:38 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
07:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
07:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [121, 0, 330, 49, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:38 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:38 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:38 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:38 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:38 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:38 INFO    opendrift.models.basemodel:2009: 2024-04-04 14:05:51.781100 - step 91 of 96 - 500 active elements (0 deactivated)
07:38 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:38 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:38 DEBUG   opendrift.models.basemodel:2028:               57.53761314794996 <- latitude  -> 57.8599560604891
07:38 DEBUG   opendrift.models.basemodel:2033:               9.821194515119366 <- longitude -> 10.686765160960595
07:38 DEBUG   opendrift.models.basemodel:2038:               -51.54620087571871   <- z ->   0.0
07:38 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:38 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:38 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:38 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:38 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 14:00:00 (before)
                2024-04-04 15:00:00 (after)
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:40 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:40 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 55x80x8) for time after (2024-04-04 15:00:00)
07:40 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 14:00:00) in space  (linearNDFast)
07:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:40 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 15:00:00) in space  (linearNDFast)
07:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 14 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:40 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 14:00:00, weight 0.90) and
                      after (2024-04-04 15:00:00, weight 0.10) in time
07:40 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.17881658772929 and -59.3132458558481 degrees.
07:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.17881658772929 and -59.3132458558481 degrees.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:40 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:40 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:40 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:40 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:40 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:40 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:40 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.836824 (min) 0.562163 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.379447 (min) 1.29099 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.5054 (min) -8.55717 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.8969 (min) 9.5123 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 98.1619 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.96009 (min) 6.2198 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2436 (min) 34.4278 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000568621 (min) 0.00287907 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:40 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 4 elements to seafloor.
07:40 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:40 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
07:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 2]
07:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0]
07:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  558.    0.]
 [   0.    0.    0.    0.    0.]
 [ 225.    0.    0.  985.    0.]
 [   6.    0. 1486.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:40 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:40 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.13904169722955517
07:40 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:40 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:40 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
07:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
07:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [122, 0, 335, 43, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:40 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:40 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:40 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:40 INFO    opendrift.models.basemodel:2009: 2024-04-04 14:35:51.781100 - step 92 of 96 - 500 active elements (0 deactivated)
07:40 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:40 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:40 DEBUG   opendrift.models.basemodel:2028:               57.53589486842047 <- latitude  -> 57.85920470865546
07:40 DEBUG   opendrift.models.basemodel:2033:               9.811902543257574 <- longitude -> 10.690267505910324
07:40 DEBUG   opendrift.models.basemodel:2038:               -52.07746293904493   <- z ->   0.0
07:40 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:40 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 14:00:00 (before)
                2024-04-04 15:00:00 (after)
07:40 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 14:00:00) in space  (linearNDFast)
07:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:40 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 15:00:00) in space  (linearNDFast)
07:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:40 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 14:00:00, weight 0.40) and
                      after (2024-04-04 15:00:00, weight 0.60) in time
07:40 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.188108574107275 and -59.30974351771685 degrees.
07:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.188108574107275 and -59.30974351771685 degrees.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:40 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:40 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:40 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:40 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:40 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:40 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:40 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:40 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:40 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:40 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:40 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.845774 (min) 0.525601 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.382053 (min) 1.23326 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -11.0165 (min) -8.09868 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 6.15462 (min) 9.51155 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 98.3306 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.97056 (min) 6.21601 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.2977 (min) 34.4271 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000486427 (min) 0.00235761 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:40 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:40 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:40 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:40 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:40 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 0 2]
07:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 3 0]
07:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  559.    0.]
 [   0.    0.    0.    0.    0.]
 [ 231.    0.    0.  989.    0.]
 [   6.    0. 1498.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:40 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:40 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1312425067068369
07:40 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:40 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:40 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:40 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 6 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:40 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:40 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
07:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
07:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [127, 0, 333, 40, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:40 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:40 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:40 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:40 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:40 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:40 INFO    opendrift.models.basemodel:2009: 2024-04-04 15:05:51.781100 - step 93 of 96 - 500 active elements (0 deactivated)
07:40 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:40 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:40 DEBUG   opendrift.models.basemodel:2028:               57.539611925622374 <- latitude  -> 57.85950650844533
07:40 DEBUG   opendrift.models.basemodel:2033:               9.804216375734809 <- longitude -> 10.696679764401342
07:40 DEBUG   opendrift.models.basemodel:2038:               -52.905984183637536   <- z ->   0.0
07:40 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:40 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:40 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:40 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:40 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 15:00:00 (before)
                2024-04-04 16:00:00 (after)
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:42 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:42 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 56x82x8) for time after (2024-04-04 16:00:00)
07:42 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 15:00:00) in space  (linearNDFast)
07:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:42 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 16:00:00) in space  (linearNDFast)
07:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
07:42 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 15:00:00, weight 0.90) and
                      after (2024-04-04 16:00:00, weight 0.10) in time
07:42 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.19579473447803 and -59.303331252376914 degrees.
07:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.19579473447803 and -59.303331252376914 degrees.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:42 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:42 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.853449 (min) 0.662419 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.358113 (min) 1.19315 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.606 (min) -7.63754 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 6.32025 (min) 9.4997 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 97.4269 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.98679 (min) 6.20945 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4919 (min) 34.4242 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000670993 (min) 0.00146964 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:42 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 3 elements to seafloor.
07:42 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:42 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
07:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 0 2 0]
07:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3 0 3]
07:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  562.    0.]
 [   0.    0.    0.    0.    0.]
 [ 235.    0.    0.  999.    0.]
 [   6.    0. 1512.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:42 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:42 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.1273613192517611
07:42 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:42 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:42 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
07:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
07:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [128, 0, 340, 32, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:42 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:42 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:42 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:42 INFO    opendrift.models.basemodel:2009: 2024-04-04 15:35:51.781100 - step 94 of 96 - 500 active elements (0 deactivated)
07:42 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:42 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:42 DEBUG   opendrift.models.basemodel:2028:               57.54075807393586 <- latitude  -> 57.85966807646164
07:42 DEBUG   opendrift.models.basemodel:2033:               9.797510670773237 <- longitude -> 10.69010157881786
07:42 DEBUG   opendrift.models.basemodel:2038:               -53.44481654684947   <- z ->   0.0
07:42 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:42 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 15:00:00 (before)
                2024-04-04 16:00:00 (after)
07:42 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 15:00:00) in space  (linearNDFast)
07:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:42 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 16:00:00) in space  (linearNDFast)
07:42 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:42 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 15:00:00, weight 0.40) and
                      after (2024-04-04 16:00:00, weight 0.60) in time
07:42 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.20250044209061 and -59.30990943901983 degrees.
07:42 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.20250044209061 and -59.30990943901983 degrees.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:42 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:42 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:42 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:42 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:42 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:42 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:42 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:42 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:42 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.793577 (min) 0.563162 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.322677 (min) 1.25307 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.5011 (min) -7.36828 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 6.02898 (min) 9.19467 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87144 (min) 97.7659 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 4.99088 (min) 6.21306 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4288 (min) 34.4254 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000589606 (min) 0.00152689 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:42 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:42 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:42 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:42 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:42 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:42 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
07:42 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
07:42 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
07:42 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  562.    0.]
 [   0.    0.    0.    0.    0.]
 [ 237.    0.    0. 1002.    0.]
 [   6.    0. 1526.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:42 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:42 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:42 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.12557973733761066
07:42 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:42 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:42 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 23 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 2 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 2 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 20 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:42 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:42 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:42 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
07:42 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:42 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
07:42 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:42 INFO    opendrift.models.chemicaldrift:1861: partitioning: [130, 0, 339, 31, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:42 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:42 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:42 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:42 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:42 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:42 INFO    opendrift.models.basemodel:2009: 2024-04-04 16:05:51.781100 - step 95 of 96 - 500 active elements (0 deactivated)
07:42 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:42 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:42 DEBUG   opendrift.models.basemodel:2028:               57.54036112747613 <- latitude  -> 57.86252113312352
07:42 DEBUG   opendrift.models.basemodel:2033:               9.791991282490892 <- longitude -> 10.697065968856048
07:42 DEBUG   opendrift.models.basemodel:2038:               -54.16392185956778   <- z ->   0.0
07:42 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:42 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:42 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:42 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:42 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:42 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 16:00:00 (before)
                2024-04-04 17:00:00 (after)
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking sea_floor_depth_below_sea_level for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking x_wind for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking y_wind for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking x_sea_water_velocity for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking y_sea_water_velocity for invalid values
07:44 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['upward_sea_water_velocity', 'sea_water_temperature', 'sea_water_salinity', 'x_sea_water_velocity', 'y_sea_water_velocity']
07:44 DEBUG   opendrift.readers.basereader.structured:310: Fetched env-block (size 58x82x8) for time after (2024-04-04 17:00:00)
07:44 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 16:00:00) in space  (linearNDFast)
07:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:44 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 17:00:00) in space  (linearNDFast)
07:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
07:44 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 16:00:00, weight 0.90) and
                      after (2024-04-04 17:00:00, weight 0.10) in time
07:44 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.20801982850218 and -59.302945048857914 degrees.
07:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.20801982850218 and -59.302945048857914 degrees.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:44 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:44 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.797473 (min) 0.610016 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.321376 (min) 1.11825 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.383 (min) -7.06042 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.71271 (min) 8.93928 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.87143 (min) 98.3901 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00591 (min) 6.21361 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.4986 (min) 34.4248 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000737886 (min) 0.00180192 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:44 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:44 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:44 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:44 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
07:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
07:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  562.    0.]
 [   0.    0.    0.    0.    0.]
 [ 241.    0.    0. 1009.    0.]
 [   6.    0. 1534.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:44 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:44 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.12581150482262973
07:44 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:44 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:44 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:44 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 19 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 18 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 17 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 21 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
07:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
07:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [134, 0, 340, 26, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:44 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:44 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:44 DEBUG   opendrift.models.basemodel:864: to be seeded: 0, already seeded 500
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.basemodel:2008: ======================================================================
07:44 INFO    opendrift.models.basemodel:2009: 2024-04-04 16:35:51.781100 - step 96 of 96 - 500 active elements (0 deactivated)
07:44 DEBUG   opendrift.models.basemodel:2015: 0 elements scheduled.
07:44 DEBUG   opendrift.models.basemodel:2017: ======================================================================
07:44 DEBUG   opendrift.models.basemodel:2028:               57.54435826194212 <- latitude  -> 57.867539352628285
07:44 DEBUG   opendrift.models.basemodel:2033:               9.787535222117459 <- longitude -> 10.694575357298746
07:44 DEBUG   opendrift.models.basemodel:2038:               -55.1193162857795   <- z ->   0.0
07:44 DEBUG   opendrift.models.basemodel:2039: ---------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
07:44 DEBUG   opendrift.readers.basereader.structured:219: Reader time:
                2024-04-04 16:00:00 (before)
                2024-04-04 17:00:00 (after)
07:44 DEBUG   opendrift.readers.basereader.structured:331: Interpolating before (2024-04-04 16:00:00) in space  (linearNDFast)
07:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:44 DEBUG   opendrift.readers.basereader.structured:337: Interpolating after (2024-04-04 17:00:00) in space  (linearNDFast)
07:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
07:44 DEBUG   opendrift.readers.basereader.structured:352: Interpolating before (2024-04-04 16:00:00, weight 0.40) and
                      after (2024-04-04 17:00:00, weight 0.60) in time
07:44 DEBUG   opendrift.readers.basereader.structured:365: Interpolating profiles in time
07:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.212475876140324 and -59.30543566791014 degrees.
07:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -60.212475876140324 and -59.30543566791014 degrees.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['ocean_mixed_layer_thickness']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader constant_reader
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from constant_reader
07:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
07:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 10 for sea_water_temperature for 0 profiles
07:44 DEBUG   opendrift.models.basemodel.environment:819:       Using fallback value 34 for sea_water_salinity for 0 profiles
07:44 DEBUG   opendrift.models.basemodel.environment:808:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
07:44 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:44 DEBUG   opendrift.models.basemodel.environment:910:     x_sea_water_velocity: -0.744387 (min) 0.615275 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     y_sea_water_velocity: -0.30728 (min) 1.1164 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_surface_height: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     x_wind: -10.2343 (min) -6.85413 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     y_wind: 5.67819 (min) 8.57101 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_floor_depth_below_sea_level: 8.88198 (min) 98.9439 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_temperature: 5.00547 (min) 6.21182 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_salinity: 20.5442 (min) 34.4227 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     upward_sea_water_velocity: -0.000714167 (min) 0.00158386 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     spm: 1 (min) 1 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     doc: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:910:     pH_sediment: 6.9 (min) 6.9 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:44 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:44 DEBUG   opendrift.models.basemodel:723: No elements hit seafloor.
07:44 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:44 DEBUG   opendrift.models.basemodel:2080: Calling ChemicalDrift.update()
07:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
07:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
07:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
07:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0]
07:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3]
07:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  563.    0.]
 [   0.    0.    0.    0.    0.]
 [ 244.    0.    0. 1013.    0.]
 [   6.    0. 1543.    0.    0.]
 [   0.    0.    0.    0.    0.]]
07:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
07:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
07:44 DEBUG   opendrift.models.oceandrift:536: Using functional expression for diffusivity
07:44 DEBUG   opendrift.models.oceandrift:541: Diffusivities are in range 0.0 to 0.11848408229723247
07:44 DEBUG   opendrift.models.oceandrift:560: TSprofiles deactivated for vertical mixing
07:44 DEBUG   opendrift.models.oceandrift:574: Vertical mixing module:windspeed_Large1994
07:44 DEBUG   opendrift.models.oceandrift:577: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 9 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 10 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 7 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 11 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 15 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 14 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 8 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 13 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 DEBUG   opendrift.models.oceandrift:624: 16 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:624: 12 elements penetrated seafloor, lifting up
07:44 DEBUG   opendrift.models.oceandrift:642: 1 elements reached seafloor, interacting with bottom
07:44 DEBUG   opendrift.models.basemodel:728: Lifting 1 elements to seafloor.
07:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
07:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
07:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
07:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
07:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 338, 26, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
07:44 DEBUG   opendrift.models.basemodel:1632: Horizontal diffusivity is 0, no random walk.
07:44 DEBUG   opendrift.models.basemodel:2095: 500 active elements (0 deactivated)
07:44 DEBUG   opendrift.models.basemodel:2124: Cleaning up
07:44 DEBUG   opendrift.models.basemodel.environment:612: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:613: Variable group ['land_binary_mask']
07:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:618: Calling reader global_landmask
07:44 DEBUG   opendrift.models.basemodel.environment:619: ----------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:635: Data needed for 500 elements
07:44 DEBUG   opendrift.readers.basereader.variables:746: Fetching variables from global_landmask
07:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
07:44 DEBUG   opendrift.readers.basereader.variables:627: Checking land_binary_mask for invalid values
07:44 DEBUG   opendrift.readers.basereader.variables:782: Reader projection is latlon - rotation of vectors is not needed.
07:44 DEBUG   opendrift.models.basemodel.environment:769: Obtained data for all elements.
07:44 DEBUG   opendrift.models.basemodel.environment:782: ---------------------------------------
07:44 DEBUG   opendrift.models.basemodel.environment:783: Finished processing all variable groups
07:44 DEBUG   opendrift.models.basemodel.environment:908: ------------ SUMMARY -------------
07:44 DEBUG   opendrift.models.basemodel.environment:910:     land_binary_mask: 0 (min) 0 (max)
07:44 DEBUG   opendrift.models.basemodel.environment:912: ---------------------------------
07:44 DEBUG   opendrift.models.basemodel:686: No elements hit coastline.
07:44 DEBUG   opendrift.models.basemodel:1681: No elements to deactivate
07:44 DEBUG   opendrift.models.basemodel:92: Changed mode from Mode.Run to Mode.Result

Print and plot results

print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int32(item)) for item in o.ntransformations[isp,:]]) )

mass = o.get_property('mass')
mass_d = o.get_property('mass_degraded')
mass_v = o.get_property('mass_volatilized')

m_pre = sum(mass[0][-1])
m_deg = sum(mass_d[0][-1])
m_vol = sum(mass_v[0][-1])
m_tot = m_pre + m_deg + m_vol

print('Mass budget for target chemical:')
print('mass preserved       : {:.3f}'.format(m_pre * 1e-6),' g   {:.3f}'.format(m_pre/m_tot*100),'%')
print('mass degraded        : {:.3f}'.format(m_deg * 1e-6),' g   {:.3f}'.format(m_deg/m_tot*100),'%')
print('mass volatilized     : {:.3f}'.format(m_vol * 1e-6),' g   {:.3f}'.format(m_vol/m_tot*100),'%')

legend=['dissolved', '', 'SPM', 'sediment', '']

o.animation_profile(color='specie',
            markersize='mass',
            markersize_scaling=30,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            legend = legend,
            legend_loc = 3,
            fps = 10
            )

Final speciation:
LMM                             :    136
Humic colloid                   :      0
Particle reversible             :    338
Sediment reversible             :     26
Sediment slowly reversible      :      0
Number of transformations:
['        0', '        0', '        0', '      563', '        0']
['        0', '        0', '        0', '        0', '        0']
['      244', '        0', '        0', '     1019', '        0']
['        6', '        0', '     1550', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
Mass budget for target chemical:
mass preserved       : 0.633  g   63.296 %
mass degraded        : 0.365  g   36.467 %
mass volatilized     : 0.002  g   0.237 %
17:07:44 DEBUG   opendrift.models.basemodel:3008: Saving animation..
17:07:44 INFO    opendrift.models.basemodel:4561: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_0.gif...
17:07:55 DEBUG   opendrift.models.basemodel:4599: MPLBACKEND = agg
17:07:55 DEBUG   opendrift.models.basemodel:4600: DISPLAY = None
17:07:55 DEBUG   opendrift.models.basemodel:4601: Time to save animation: 0:00:11.024640
17:07:55 INFO    opendrift.models.basemodel:3215: Time to make animation: 0:00:11.211516

o.animation(color='specie',
            markersize='mass',
            markersize_scaling=100,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            fast = True,
            legend = legend,
            legend_loc = 3,
            fps=10
            )

07:55 DEBUG   opendrift.models.basemodel:2331: Setting up map: corners=None, fast=True, lscale=None
07:55 WARNING opendrift.models.basemodel:2377: Plotting fast. This will make your plots less accurate.
07:57 DEBUG   opendrift.models.basemodel:3008: Saving animation..
07:57 INFO    opendrift.models.basemodel:4561: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_1.gif...
08:16 DEBUG   opendrift.models.basemodel:4599: MPLBACKEND = agg
08:16 DEBUG   opendrift.models.basemodel:4600: DISPLAY = None
08:16 DEBUG   opendrift.models.basemodel:4601: Time to save animation: 0:00:19.377369
08:16 INFO    opendrift.models.basemodel:3001: Time to make animation: 0:00:20.926167

o.plot_mass(legend = legend,
            time_unit = 'hours',
            title = 'Chemical mass budget')

dissolved : 0.14490662499999998g (22.89350308243472%)
SPM : 0.4628070625g (73.11794689798556%)
sediment : 0.02524591015625g (3.988550019579708%)
/root/project/opendrift/models/chemicaldrift.py:3006: UserWarning: set_ticklabels() should only be used with a fixed number of ticks, i.e. after set_ticks() or using a FixedLocator.
  ax.axes.get_xaxis().set_ticklabels(np.round(ax.axes.get_xticks() * time_conversion_factor))

Total running time of the script: (2 minutes 32.842 seconds)

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