Oil budget (NOAA)

from datetime import datetime
from opendrift import test_data_folder as tdf
from opendrift.readers import reader_netCDF_CF_generic
from opendrift.models.openoil import OpenOil

o = OpenOil(loglevel=20, weathering_model='noaa')

# Using constand wind and current
#o.set_config('environment:fallback:x_wind', 7)
#o.set_config('environment:fallback:x_sea_water_velocity', .7)
#o.set_config('environment:fallback:y_sea_water_velocity', .3)
#o.set_config('environment:fallback:land_binary_mask', 0)

# Arome atmospheric model
reader_arome = reader_netCDF_CF_generic.Reader(tdf + '16Nov2015_NorKyst_z_surface/arome_subset_16Nov2015.nc')
# Norkyst ocean model
reader_norkyst = reader_netCDF_CF_generic.Reader(tdf + '16Nov2015_NorKyst_z_surface/norkyst800_subset_16Nov2015.nc')

o.add_reader([reader_arome, reader_norkyst])
17:03:22 INFO    opendrift:569: OpenDriftSimulation initialised (version 1.14.11 / v1.14.12-66-g07283eb)
17:03:22 INFO    opendrift.readers:67: Opening file with xr.open_dataset
17:03:23 INFO    opendrift.readers.reader_netCDF_CF_generic:340: Detected dimensions: {'time': 'time', 'x': 'x', 'y': 'y'}
17:03:23 INFO    opendrift.readers:67: Opening file with xr.open_dataset
17:03:23 INFO    opendrift.readers.reader_netCDF_CF_generic:340: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}

Adjusting some configuration

o.set_config('processes:dispersion', False)
o.set_config('processes:evaporation', True)
o.set_config('processes:emulsification', True)
o.set_config('drift:vertical_mixing', True)

Seeding some oil particles

oil_type='MARTIN LINGE CRUDE 2016'
o.seed_elements(lon=4.88, lat=60.1, z=0, radius=3000, number=500,
                time=reader_norkyst.start_time, oil_type=oil_type)
17:03:23 INFO    opendrift.models.openoil.adios.dirjs:86: Querying ADIOS database for oil: MARTIN LINGE CRUDE 2016
17:03:23 INFO    opendrift.models.openoil.openoil:1731: Using density 930.00252 and viscosity 0.0004141770017829454 of oiltype MARTIN LINGE CRUDE 2016
17:03:23 INFO    opendrift.models.basemodel.environment:203: Adding a global landmask from GSHHG
17:03:28 INFO    opendrift.models.basemodel.environment:227: Fallback values will be used for the following variables which have no readers:
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_height: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    upward_sea_water_velocity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_wave_significant_height: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_wave_stokes_drift_x_velocity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_wave_stokes_drift_y_velocity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_wave_period_at_variance_spectral_density_maximum: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_surface_wave_mean_period_from_variance_spectral_density_second_frequency_moment: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_ice_area_fraction: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_ice_x_velocity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_ice_y_velocity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_water_temperature: 10.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_water_salinity: 34.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    sea_floor_depth_below_sea_level: 10000.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    horizontal_diffusivity: 0.000000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    ocean_vertical_diffusivity: 0.020000
17:03:28 INFO    opendrift.models.basemodel.environment:230:    ocean_mixed_layer_thickness: 50.000000

Running model

o.run(steps=4*24, time_step=900, time_step_output=3600)
17:03:28 INFO    opendrift:1911: Skipping environment variable upward_sea_water_velocity because of condition ['drift:vertical_advection', 'is', False]
17:03:28 INFO    opendrift:1922: Storing previous values of element property lon because of condition (('general:coastline_action', 'in', ['stranding', 'previous']), 'or', ('general:seafloor_action', 'in', ['previous']))
17:03:28 INFO    opendrift:1922: Storing previous values of element property lat because of condition (('general:coastline_action', 'in', ['stranding', 'previous']), 'or', ('general:seafloor_action', 'in', ['previous']))
17:03:28 INFO    opendrift:958: Using existing reader for land_binary_mask to move elements to ocean
17:03:28 INFO    opendrift:990: All points are in ocean
17:03:28 INFO    opendrift.models.openoil.openoil:697: Oil-water surface tension is 0.033729 Nm
17:03:28 INFO    opendrift.models.openoil.openoil:706: Using max water fractions [0.72, 0.78] for temperatures [5.0, 15.0] for oiltype MARTIN LINGE CRUDE 2016
17:03:28 INFO    opendrift.models.openoil.openoil:707: Corresponding max water fraction from GNOME is 0.731347796266117
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17:03:33 WARNING opendrift.readers.basereader.structured:324: Data block from /root/project/tests/test_data/16Nov2015_NorKyst_z_surface/arome_subset_16Nov2015.nc not large enough to cover element positions within timestep. Buffer size (4) must be increased. See `Variables.set_buffer_size`.
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<xarray.Dataset> Size: 2MB
Dimensions:                                                                              (
                                                                                          trajectory: 500,
                                                                                          time: 25)
Coordinates:
  * trajectory                                                                           (trajectory) int64 4kB ...
  * time                                                                                 (time) datetime64[ns] 200B ...
Data variables: (12/44)
    status                                                                               (trajectory, time) float32 50kB ...
    moving                                                                               (trajectory, time) float32 50kB ...
    age_seconds                                                                          (trajectory, time) float32 50kB ...
    origin_marker                                                                        (trajectory, time) float32 50kB ...
    lon                                                                                  (trajectory, time) float32 50kB ...
    lat                                                                                  (trajectory, time) float32 50kB ...
    ...                                                                                   ...
    sea_water_salinity                                                                   (trajectory, time) float32 50kB ...
    sea_floor_depth_below_sea_level                                                      (trajectory, time) float32 50kB ...
    horizontal_diffusivity                                                               (trajectory, time) float32 50kB ...
    ocean_vertical_diffusivity                                                           (trajectory, time) float32 50kB ...
    land_binary_mask                                                                     (trajectory, time) float32 50kB ...
    ocean_mixed_layer_thickness                                                          (trajectory, time) float32 50kB ...
Attributes: (12/167)
    Conventions:                                                             ...
    standard_name_vocabulary:                                                ...
    featureType:                                                             ...
    title:                                                                   ...
    summary:                                                                 ...
    keywords:                                                                ...
    ...                                                                                                               ...
    geospatial_lon_units:                                                    ...
    geospatial_lon_resolution:                                               ...
    runtime:                                                                 ...
    geospatial_vertical_min:                                                 ...
    geospatial_vertical_max:                                                 ...
    geospatial_vertical_positive:                                            ...


Print and plot results

o.plot_oil_budget()
o.plot(fast=True)
o.animation(fast=True)
#o.plot_oil_budget('oil_budget_MartinLingeCrude.png')
  • MARTIN LINGE CRUDE 2016 (930.0 kg/m3) - 2015-11-16 00:00 to 2015-11-17 00:00
  • OpenDrift - OpenOil (MARTIN LINGE CRUDE 2016) 2015-11-16 00:00 to 2015-11-17 00:00 UTC (25 steps)
17:03:35 WARNING opendrift:2614: Plotting fast. This will make your plots less accurate.
17:03:36 WARNING opendrift:2614: Plotting fast. This will make your plots less accurate.
17:03:37 INFO    opendrift:4889: Saving animation to /root/project/docs/source/gallery/animations/example_oil_budget_noaa_0.gif...
17:03:45 INFO    opendrift:3297: Time to make animation: 0:00:08.405387
../_images/example_oil_budget_noaa_0.gif
o.plot_property('fraction_evaporated')
o.plot_property('density')
o.plot_property('water_fraction')
o.plot_property('viscosity')
o.plot_property('interfacial_area')
o.plot_property('z')
  • fraction_evaporated
  • density
  • water_fraction
  • viscosity
  • interfacial_area
  • z

Total running time of the script: (0 minutes 33.466 seconds)

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